FvH4_2g11841

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000194
Physical Location & Seq
Reverse (-)
10358472 .. 10360416
1945 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g11841.t1

Sequence Viewer

Length: 1095 bp
ATGCAGCAATGGGAGGGTGGTTTGGGATTCAAGGATAAGCACCATTATAATGTTGCATTACTGGCCAAACAGTGTTGGCGCATTCTTTCCCAGCCTGAGTCTTTGTGGGTTAAAGTGCTTAAGGCACGTTACTTTCCTGAGTGTGATTTTTTGCATGCCAACAAGGGCTATCGGGCTTCATGGGGGTGGTCAAGCATCTTACAAGCTAGAGATTTGATAATGGAGGGCTCTGGTTGGCAAATCGCCAATGGATTGAAGGCGAACATATGGACAGAGAATTGGCTTCATCCCCCTGATGTATGCCCTATTCAGACTACTGCTCAGATAAGTAACAATGATCCACAATTGGTATTTGAGATCATTGATTGGCCTAGCAAAACATGGAACCTAGACTCAATTCTCCATCTTATACAACCTTCCGAAGCTAACAAAATTCTACTAATTCCCATCGGGAGTCATGATGGGGAGGATAGGATCATTTGGCCATGGAACAAAAGGGGGGTTTATACTGTTAGTTCAAGATACACCTGGATTAACAGTAAGTGCCGGGTGATCAACCCTCCTAAGTGCAGCTCTTCTCATTCTGTGGAGACAGCAGTGTGGAGACAATTATGGAAGATAAGAGCTCCTCCTAAGGCCGTGTGGTTTGGTTCATCATTGGGTCTCAAAATCAACAAAAATCATATATCAACCTTAGACTCATGGTTAAAAGAGATCTGCAAGGCTCACAATTCACAAGATAGAATATGGGTACTCACCATGGTTGGCTGCATTTGTTGGAGTATCTGGAAGAGTCGATGCAGCTTTGTTTATGACAGGAGACCAATTAGCCCTCCCGCCGTGATTCAGTCCAGTCTCAATCTGGCCTTGGAGTTTTGGAGTGCAAACCGGAAAGACCCACCATCTCTGGAGTCTGAAGCGAGATCACGAAAACGATGGCAGCCCCCACCATTGGATGTTGTGGATGTATGCTGTGACGCCTCATGGATTGAATCGGGAAAGCAGCAGAATGGAAGCAATTTCAGCATTATCAAACCCGAGATCATCTATCAGTTTCACAATACGTTTATGGGATTTTCGAATGAGCGCTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

365

Amino Acids

42.05

Weight (kDa)

9.06

Isoelectric Point (pI)

53.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 48
AciI CCGC 1 cut(s) 837
AclWI GGATC 2 cut(s) 332, 482
AcoI YGGCCR 2 cut(s) 63, 482
AcsI RAATTY 1 cut(s) 432
AcuI CTGAAG 1 cut(s) 936
AcyI GRCGYC 1 cut(s) 978
AfaI GTAC 1 cut(s) 753
AfeI AGCGCT 1 cut(s) 1088
AfiI CCNNNNNNNGG 1 cut(s) 952
AflII CTTAAG 1 cut(s) 119
AgsI TTSAA 4 cut(s) 31, 256, 519, 992
AjnI CCWGG 1 cut(s) 527
AluBI AGCT 5 cut(s) 206, 425, 573, 626, 804
AluI AGCT 5 cut(s) 206, 425, 573, 626, 804
Alw21I GWGCWC 1 cut(s) 628
Alw26I GTCTC 5 cut(s) 584, 598, 668, 814, 860
AlwI GGATC 2 cut(s) 332, 482
Ama87I CYCGRG 1 cut(s) 1037
Aor51HI AGCGCT 1 cut(s) 1088
AoxI GGCC 5 cut(s) 63, 368, 482, 636, 864
ApeKI GCWGC 6 cut(s) 4, 570, 768, 801, 940, 1003
ApoI RAATTY 1 cut(s) 432
AspLEI GCGC 2 cut(s) 81, 1089
AsuC2I CCSGG 1 cut(s) 548
AsuHPI GGTGA 2 cut(s) 562, 748
AsuII TTCGAA 1 cut(s) 1079
AvaI CYCGRG 1 cut(s) 1037
AxyI CCTNAGG 1 cut(s) 633
BalI TGGCCA 2 cut(s) 65, 484
BanII GRGCYC 2 cut(s) 230, 628
Bbv12I GWGCWC 1 cut(s) 628
BbvI GCAGC 6 cut(s) 16, 582, 755, 813, 952, 1015
BccI CCATC 5 cut(s) 411, 455, 455, 910, 930
BceAI ACGGC 2 cut(s) 623, 824
BciT130I CCWGG 1 cut(s) 529
BclI TGATCA 1 cut(s) 552
BcnI CCSGG 1 cut(s) 548
BcoDI GTCTC 5 cut(s) 584, 598, 668, 814, 860
BfaI CTAG 3 cut(s) 207, 372, 389
BfoI RGCGCY 1 cut(s) 1090
BfrI CTTAAG 1 cut(s) 119
BglII AGATCT 1 cut(s) 714
BisI GCNGC 6 cut(s) 5, 571, 769, 802, 941, 1004
BlsI GCNGC 6 cut(s) 6, 572, 770, 803, 942, 1005
Bme1390I CCNGG 2 cut(s) 529, 548
BmeT110I CYCGRG 1 cut(s) 1037
BmiI GGNNCC 1 cut(s) 386
BmrFI CCNGG 2 cut(s) 529, 548
BmsI GCATC 2 cut(s) 204, 788
BpmI CTGGAG 1 cut(s) 929
Bpu14I TTCGAA 1 cut(s) 1079
BpuMI CCSGG 1 cut(s) 548
BsaHI GRCGYC 1 cut(s) 978
BsaI GGTCTC 2 cut(s) 668, 814
BsaJI CCNNGG 3 cut(s) 485, 759, 867
BsaWI WCCGGW 1 cut(s) 888
Bsc4I CCNNNNNNNGG 1 cut(s) 952
Bse1I ACTGG 2 cut(s) 66, 852
Bse21I CCTNAGG 1 cut(s) 633
Bse3DI GCAATG 1 cut(s) 14
BseBI CCWGG 1 cut(s) 529
BseDI CCNNGG 3 cut(s) 485, 759, 867
BseGI GGATG 3 cut(s) 286, 961, 970
BseLI CCNNNNNNNGG 1 cut(s) 952
BseMI GCAATG 1 cut(s) 14
BseMII CTCAG 3 cut(s) 87, 129, 335
BseNI ACTGG 2 cut(s) 66, 852
BseRI GAGGAG 1 cut(s) 618
BseXI GCAGC 6 cut(s) 16, 582, 755, 813, 952, 1015
BseYI CCCAGC 1 cut(s) 90
BsgI GTGCAG 1 cut(s) 589
BshFI GGCC 5 cut(s) 65, 370, 484, 638, 866
BsiHKAI GWGCWC 1 cut(s) 628
BsiHKCI CYCGRG 1 cut(s) 1037
BsiSI CCGG 2 cut(s) 547, 889
BslI CCNNNNNNNGG 1 cut(s) 952
BsmAI GTCTC 5 cut(s) 584, 598, 668, 814, 860
BsmI GAATGC 1 cut(s) 81
BsnI GGCC 5 cut(s) 65, 370, 484, 638, 866
Bso31I GGTCTC 2 cut(s) 668, 814
BsoBI CYCGRG 1 cut(s) 1037
Bsp119I TTCGAA 1 cut(s) 1079
Bsp1286I GDGCHC 2 cut(s) 230, 628
Bsp143I GATC 7 cut(s) 337, 357, 474, 552, 714, 923, 1041
Bsp19I CCATGG 2 cut(s) 485, 759
BspACI CCGC 1 cut(s) 837
BspANI GGCC 5 cut(s) 65, 370, 484, 638, 866
BspCNI CTCAG 3 cut(s) 88, 130, 334
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 1 cut(s) 386
BspPI GGATC 2 cut(s) 332, 482
BspQI GCTCTTC 1 cut(s) 580
BspT104I TTCGAA 1 cut(s) 1079
BspTI CTTAAG 1 cut(s) 119
BspTNI GGTCTC 2 cut(s) 668, 814
BsrDI GCAATG 1 cut(s) 14
BsrI ACTGG 2 cut(s) 66, 852
BssECI CCNNGG 3 cut(s) 485, 759, 867
BssMI GATC 7 cut(s) 337, 357, 474, 552, 714, 923, 1041
BssNI GRCGYC 1 cut(s) 978
BssT1I CCWWGG 3 cut(s) 485, 759, 867
Bst2UI CCWGG 1 cut(s) 529
Bst4CI ACNGT 3 cut(s) 72, 511, 539
Bst6I CTCTTC 2 cut(s) 580, 785
BstACI GRCGYC 1 cut(s) 978
BstAFI CTTAAG 1 cut(s) 119
BstBI TTCGAA 1 cut(s) 1079
BstC8I GCNNGC 1 cut(s) 156
BstDEI CTNAG 6 cut(s) 96, 138, 321, 564, 633, 694
BstDSI CCRYGG 2 cut(s) 485, 759
BstF5I GGATG 3 cut(s) 286, 961, 970
BstH2I RGCGCY 1 cut(s) 1090
BstHHI GCGC 2 cut(s) 81, 1089
BstKTI GATC 7 cut(s) 340, 360, 477, 555, 717, 926, 1044
BstMAI GTCTC 5 cut(s) 584, 598, 668, 814, 860
BstMBI GATC 7 cut(s) 337, 357, 474, 552, 714, 923, 1041
BstMWI GCNNNNNNNGC 2 cut(s) 62, 1023
BstNI CCWGG 1 cut(s) 529
BstNSI RCATGY 1 cut(s) 158
BstSCI CCNGG 2 cut(s) 527, 546
BstV1I GCAGC 6 cut(s) 16, 582, 755, 813, 952, 1015
BstX2I RGATCY 1 cut(s) 714
BstYI RGATCY 1 cut(s) 714
Bsu36I CCTNAGG 1 cut(s) 633
BsuRI GGCC 5 cut(s) 65, 370, 484, 638, 866
BtgI CCRYGG 2 cut(s) 485, 759
BtsCI GGATG 3 cut(s) 286, 961, 970
BtsI GCAGTG 1 cut(s) 603
BtsIMutI CAGTG 2 cut(s) 77, 603
Cac8I GCNNGC 1 cut(s) 156
CciI TCATGA 1 cut(s) 457
CfoI GCGC 2 cut(s) 81, 1089
CseI GACGC 1 cut(s) 986
Csp6I GTAC 1 cut(s) 752
CviAII CATG 8 cut(s) 155, 180, 381, 458, 486, 702, 760, 984
CviQI GTAC 1 cut(s) 752
DdeI CTNAG 6 cut(s) 96, 138, 321, 564, 633, 694
DpnI GATC 7 cut(s) 339, 359, 476, 554, 716, 925, 1043
DpnII GATC 7 cut(s) 337, 357, 474, 552, 714, 923, 1041
EaeI YGGCCR 2 cut(s) 63, 482
Eam1104I CTCTTC 2 cut(s) 580, 785
EarI CTCTTC 2 cut(s) 580, 785
Ecl136II GAGCTC 1 cut(s) 626
Eco130I CCWWGG 3 cut(s) 485, 759, 867
Eco24I GRGCYC 2 cut(s) 230, 628
Eco31I GGTCTC 2 cut(s) 668, 814
Eco47III AGCGCT 1 cut(s) 1088
Eco53kI GAGCTC 1 cut(s) 626
Eco57I CTGAAG 1 cut(s) 936
Eco81I CCTNAGG 1 cut(s) 633
Eco88I CYCGRG 1 cut(s) 1037
EcoICRI GAGCTC 1 cut(s) 626
EcoRII CCWGG 1 cut(s) 527
EcoT14I CCWWGG 3 cut(s) 485, 759, 867
EcoT38I GRGCYC 2 cut(s) 230, 628
ErhI CCWWGG 3 cut(s) 485, 759, 867
FaeI CATG 8 cut(s) 158, 183, 384, 461, 489, 705, 763, 987
FatI CATG 8 cut(s) 154, 179, 380, 457, 485, 701, 759, 983
FauI CCCGC 1 cut(s) 844
FauNDI CATATG 1 cut(s) 266
FbaI TGATCA 1 cut(s) 552
Fnu4HI GCNGC 6 cut(s) 5, 571, 769, 802, 941, 1004
FokI GGATG 3 cut(s) 273, 968, 977
FriOI GRGCYC 2 cut(s) 230, 628
Fsp4HI GCNGC 6 cut(s) 5, 571, 769, 802, 941, 1004
FspBI CTAG 3 cut(s) 207, 372, 389
GlaI GCGC 2 cut(s) 80, 1088
GluI GCNGC 6 cut(s) 5, 571, 769, 802, 941, 1004
GsaI CCCAGC 1 cut(s) 94
GsuI CTGGAG 1 cut(s) 929
HaeII RGCGCY 1 cut(s) 1090
HaeIII GGCC 5 cut(s) 65, 370, 484, 638, 866
HapII CCGG 2 cut(s) 547, 889
HgaI GACGC 1 cut(s) 986
HhaI GCGC 2 cut(s) 81, 1089
Hin1I GRCGYC 1 cut(s) 978
Hin1II CATG 8 cut(s) 158, 183, 384, 461, 489, 705, 763, 987
Hin6I GCGC 2 cut(s) 79, 1087
HinP1I GCGC 2 cut(s) 79, 1087
HinfI GANTC 9 cut(s) 27, 98, 392, 454, 698, 793, 844, 911, 992
HpaII CCGG 2 cut(s) 547, 889
HphI GGTGA 2 cut(s) 562, 748
Hpy188I TCNGA 4 cut(s) 312, 324, 421, 916
Hpy188III TCNNGA 8 cut(s) 137, 451, 458, 519, 787, 908, 927, 996
HpyAV CCTTC 2 cut(s) 250, 426
HpyCH4III ACNGT 3 cut(s) 72, 511, 539
HpyCH4IV ACGT 2 cut(s) 127, 1064
HpyCH4V TGCA 8 cut(s) 4, 56, 154, 570, 720, 771, 801, 884
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 1023
HpyF3I CTNAG 6 cut(s) 96, 138, 321, 564, 633, 694
HpySE526I ACGT 2 cut(s) 127, 1064
Hsp92I GRCGYC 1 cut(s) 978
Hsp92II CATG 8 cut(s) 158, 183, 384, 461, 489, 705, 763, 987
HspAI GCGC 2 cut(s) 79, 1087
Ksp22I TGATCA 1 cut(s) 552
Kzo9I GATC 7 cut(s) 337, 357, 474, 552, 714, 923, 1041
LguI GCTCTTC 1 cut(s) 580
LmnI GCTCC 1 cut(s) 631
Lsp1109I GCAGC 6 cut(s) 16, 582, 755, 813, 952, 1015
LweI GCATC 2 cut(s) 204, 788
MaeI CTAG 3 cut(s) 207, 372, 389
MaeII ACGT 2 cut(s) 127, 1064
MaeIII GTNAC 3 cut(s) 128, 329, 974
MalI GATC 7 cut(s) 339, 359, 476, 554, 716, 925, 1043
MboI GATC 7 cut(s) 337, 357, 474, 552, 714, 923, 1041
MboII GAAGA 3 cut(s) 567, 628, 802
MfeI CAATTG 1 cut(s) 344
MflI RGATCY 1 cut(s) 714
MhlI GDGCHC 2 cut(s) 230, 628
MlsI TGGCCA 2 cut(s) 65, 484
MluCI AATT 9 cut(s) 277, 344, 396, 432, 441, 608, 730, 825, 1018
MluNI TGGCCA 2 cut(s) 65, 484
MlyI GAGTC 6 cut(s) 107, 386, 463, 692, 802, 920
MmeI TCCRAC 1 cut(s) 758
MnlI CCTC 7 cut(s) 7, 217, 460, 570, 639, 843, 991
Mox20I TGGCCA 2 cut(s) 65, 484
MscI TGGCCA 2 cut(s) 65, 484
MseI TTAA 4 cut(s) 111, 120, 534, 707
MslI CAYNNNNRTG 2 cut(s) 48, 184
Msp20I TGGCCA 2 cut(s) 65, 484
MspCI CTTAAG 1 cut(s) 119
MspI CCGG 2 cut(s) 547, 889
MspR9I CCNGG 2 cut(s) 529, 548
MunI CAATTG 1 cut(s) 344
Mva1269I GAATGC 1 cut(s) 81
MvaI CCWGG 1 cut(s) 529
MwoI GCNNNNNNNGC 2 cut(s) 62, 1023
NciI CCSGG 1 cut(s) 548
NcoI CCATGG 2 cut(s) 485, 759
NdeI CATATG 1 cut(s) 266
NdeII GATC 7 cut(s) 337, 357, 474, 552, 714, 923, 1041
NlaIII CATG 8 cut(s) 158, 183, 384, 461, 489, 705, 763, 987
NlaIV GGNNCC 1 cut(s) 386
NmuCI GTSAC 1 cut(s) 974
NspI RCATGY 1 cut(s) 158
NspV TTCGAA 1 cut(s) 1079
PaeI GCATGC 1 cut(s) 158
PagI TCATGA 1 cut(s) 457
PciSI GCTCTTC 1 cut(s) 580
PctI GAATGC 1 cut(s) 81
PfeI GAWTC 3 cut(s) 27, 844, 992
PkrI GCNGC 6 cut(s) 6, 572, 770, 803, 942, 1005
PleI GAGTC 6 cut(s) 106, 386, 462, 692, 801, 919
PpsI GAGTC 6 cut(s) 106, 386, 462, 692, 801, 919
PsiI TTATAA 1 cut(s) 48
Psp124BI GAGCTC 1 cut(s) 628
Psp6I CCWGG 1 cut(s) 527
PspFI CCCAGC 1 cut(s) 90
PspGI CCWGG 1 cut(s) 527
PspN4I GGNNCC 1 cut(s) 386
PsuI RGATCY 1 cut(s) 714
RsaI GTAC 1 cut(s) 753
RsaNI GTAC 1 cut(s) 752
RseI CAYNNNNRTG 2 cut(s) 48, 184
SacI GAGCTC 1 cut(s) 628
SapI GCTCTTC 1 cut(s) 580
SaqAI TTAA 4 cut(s) 111, 120, 534, 707
SatI GCNGC 6 cut(s) 5, 571, 769, 802, 941, 1004
Sau3AI GATC 7 cut(s) 337, 357, 474, 552, 714, 923, 1041
SchI GAGTC 6 cut(s) 107, 386, 463, 692, 802, 920
ScrFI CCNGG 2 cut(s) 529, 548
SduI GDGCHC 2 cut(s) 230, 628
SfaNI GCATC 2 cut(s) 204, 788
SfuI TTCGAA 1 cut(s) 1079
SmiMI CAYNNNNRTG 2 cut(s) 48, 184
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
SphI GCATGC 1 cut(s) 158
Sse9I AATT 9 cut(s) 277, 344, 396, 432, 441, 608, 730, 825, 1018
SsiI CCGC 1 cut(s) 837
SspMI CTAG 3 cut(s) 207, 372, 389
SstI GAGCTC 1 cut(s) 628
StyD4I CCNGG 2 cut(s) 527, 546
StyI CCWWGG 3 cut(s) 485, 759, 867
TaaI ACNGT 3 cut(s) 72, 511, 539
TaiI ACGT 2 cut(s) 130, 1067
TaqI TCGA 2 cut(s) 796, 1079
TasI AATT 9 cut(s) 277, 344, 396, 432, 441, 608, 730, 825, 1018
TfiI GAWTC 3 cut(s) 27, 844, 992
Tru1I TTAA 4 cut(s) 111, 120, 534, 707
Tru9I TTAA 4 cut(s) 111, 120, 534, 707
TscAI CASTG 2 cut(s) 77, 603
TseFI GTSAC 1 cut(s) 974
TseI GCWGC 6 cut(s) 4, 570, 768, 801, 940, 1003
Tsp45I GTSAC 1 cut(s) 974
TspDTI ATGAA 3 cut(s) 168, 275, 642
TspRI CASTG 2 cut(s) 77, 603
Vha464I CTTAAG 1 cut(s) 119
XapI RAATTY 1 cut(s) 432
XceI RCATGY 1 cut(s) 158
XcmI CCANNNNNNNNNTGG 1 cut(s) 859
XspI CTAG 3 cut(s) 207, 372, 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.