Prupe.1G202000_v2.0.a1

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000194
Physical Location & Seq
Forward (+)
20012957 .. 20014728
1772 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G202000.1

Sequence Viewer

Length: 1626 bp
ATGTCGTGTCCAATTACTCTATGTCGTGAAATTGATTCACTTATTGCTAATTTCTGGTGGGGTAATAATTCAGGAGGGGGAAATAAAATTCATTGGAAGCGTTGGGAGCTGATGGGTTTATCTAAGGCAGCTGGAGGGATGGGGTTCAAAAACCTAGGTTATTTCAATGATGCTATGCTTGCTAGGCAAGCCTGGAGGATTATTTGCAACCCGGGTGCCTTATGGGTCCAAATTCTTAAAGGTTTATATTTTCCCGATTGCTGCTTTTTGGAGGCTCAAAAAGGAGGCCGTGCTTCGTGGGCTTGGTCAAGCATTCTACTGGGACGGGATATCATTCTTTCTGGAGCTCATTGGCAGATTCTAAATGGATCTTCTACCTCAATTTGGGCTGATAAATGGATCCCAGGTATCCCAGGTGGTTATTTGCAACCTTGTCTCCCTGTTCCTGTGGATGCTCCTGTCAAGTCCGGTAACTTTACTGTGAAGTCGGGCTATAATTGGATTGTGAATCAAAATATCAGGTGTCCCTTGGCTAATGCTCAATCTTCACATACCATTTCTCTTGATACTTGGAAGATCATTTGGGAGTCCAAAACCCTTCCGAAAGTAAAACAGTTTCTTTGGCGAGCGGTCTCTAATATTCTCCCTTCCTTCTTAAATCTCTATAAGCGTAGGTTGTCCTCTTTGCATTTATGTCCTATTTGTTTGGAGAGTCCTGAATCAATTGAACATATGCTGGTCCTTTGTCCTTGGACAGCGTGTGTTTGGTTTGGAATTGCAATTGGCTATCGCGTGGATTTGCAAAATTTTACTTCTTTGGATAGATGGTTGGGCAGTCTCTTGAGAGGGGAGAGTATGTTTTCACTGAATTCTAGGTGGATTTTGTCGGTTGTTGCTTTCACTTGTTGGCATATTTGGGAGGCTCGATGTAAATTTGTTTACAATGATATCCCAATTGTGCCTGCAGCTACTAGATCTCGTGCTTGTTTGGCTGTGTCGGAATTTTGGAATGTTACCAAGAAGCCAGTTCTTGGGTCAGTGGGTATGCCTATTCAGATTTCTTCTCCTCATCCTTCTCATTGGCTACCCCCCATTTCTTCTTATGTTAAGATTAATACTGATGGTTCTTGGAAGTCTGGTTCTGCTATGGTTGGAGTTGGAGTTATTATTCGGAAGATTGCTGGTTCTTGTATTGGGGGTCTTGCTGCTCAGGTGCCTGCCCAATCTCCACTTATGGCTGAAGTTTTGGCCCTGAAACATGGTCTTTTGAGAGCTAAAGAGTTGAATTTGGTTAATGTTGTGGTGGAATCTGATTCTCAAGTGGCTATTAATTCTGTTTTGAGGGATGTTTCTTCCTCTAATTGGGAGTTGTATCCTATCCTTAAGGATATTAGGTTTCTTAAAGCCTCTTTCACAAATCTGAATTGGGCATGGGTGCCCCATGAAGCGAACCGGTCTGCGGATGCCGTTGCCTCGCTTGCCAGGAAGGGGATGTGCTTGGAGTCGTGGCTTGTGCGACCTCCATCCTCTCTAGTAAGGGTGGGCACGGTTCGGTTTGGACCGGTTTTGCTTCAAATTAGAACCGATCCGATACTATTCATCCGGTTTGGTTCGGTTCGGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

542

Amino Acids

60.27

Weight (kDa)

9.53

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 215, 1213, 1435
AccB7I CCANNNNNTGG 1 cut(s) 1031
AccBSI CCGCTC 1 cut(s) 629
AccII CGCG 1 cut(s) 792
AciI CCGC 2 cut(s) 629, 1460
AclWI GGATC 4 cut(s) 376, 394, 407, 1580
AcsI RAATTY 7 cut(s) 87, 231, 805, 868, 932, 1001, 1285
AcuI CTGAAG 1 cut(s) 1260
AfiI CCNNNNNNNGG 5 cut(s) 384, 1031, 1362, 1459, 1488
AflII CTTAAG 1 cut(s) 1382
AgeI ACCGGT 2 cut(s) 1452, 1561
AgsI TTSAA 5 cut(s) 148, 166, 728, 1285, 1574
AjnI CCWGG 4 cut(s) 191, 403, 412, 1481
AloI GAACNNNNNNTCC 2 cut(s) 1123, 1155
AluBI AGCT 5 cut(s) 109, 131, 347, 968, 1274
AluI AGCT 5 cut(s) 109, 131, 347, 968, 1274
Alw21I GWGCWC 1 cut(s) 349
Alw26I GTCTC 3 cut(s) 440, 637, 842
AlwI GGATC 4 cut(s) 376, 394, 407, 1580
Ama87I CYCGRG 1 cut(s) 211
AoxI GGCC 2 cut(s) 286, 1248
ApeKI GCWGC 4 cut(s) 128, 261, 965, 1205
ApoI RAATTY 7 cut(s) 87, 231, 805, 868, 932, 1001, 1285
AseI ATTAAT 2 cut(s) 1113, 1329
AsiGI ACCGGT 2 cut(s) 1452, 1561
AspA2I CCTAGG 1 cut(s) 154
AspS9I GGNCC 4 cut(s) 226, 739, 1249, 1559
AsuC2I CCSGG 2 cut(s) 212, 213
AvaI CYCGRG 1 cut(s) 211
AvaII GGWCC 3 cut(s) 226, 739, 1559
AvrII CCTAGG 1 cut(s) 154
BaeGI GKGCMC 2 cut(s) 1440, 1547
BamHI GGATCC 1 cut(s) 399
BanI GGYRCC 3 cut(s) 215, 1213, 1435
BanII GRGCYC 1 cut(s) 349
BauI CACGAG 1 cut(s) 978
Bbv12I GWGCWC 1 cut(s) 349
BbvI GCAGC 4 cut(s) 140, 248, 977, 1192
BccI CCATC 5 cut(s) 106, 133, 819, 1115, 1531
BceAI ACGGC 2 cut(s) 273, 1451
BciT130I CCWGG 4 cut(s) 193, 405, 414, 1483
BciVI GTATCC 2 cut(s) 419, 1383
BcnI CCSGG 2 cut(s) 212, 213
BcoDI GTCTC 3 cut(s) 440, 637, 842
BfaI CTAG 5 cut(s) 155, 183, 873, 972, 1532
BfmI CTRYAG 1 cut(s) 963
BfrI CTTAAG 1 cut(s) 1382
BfuI GTATCC 2 cut(s) 419, 1383
BglII AGATCT 1 cut(s) 974
BisI GCNGC 4 cut(s) 129, 262, 966, 1206
BlnI CCTAGG 1 cut(s) 154
BlsI GCNGC 4 cut(s) 130, 263, 967, 1207
Bme1390I CCNGG 6 cut(s) 193, 212, 213, 405, 414, 1483
Bme18I GGWCC 3 cut(s) 226, 739, 1559
BmeT110I CYCGRG 1 cut(s) 211
BmgT120I GGNCC 4 cut(s) 226, 739, 1249, 1559
BmiI GGNNCC 5 cut(s) 217, 227, 401, 1215, 1437
BmrFI CCNGG 6 cut(s) 193, 212, 213, 405, 414, 1483
BmrI ACTGGG 1 cut(s) 329
BmsI GCATC 3 cut(s) 160, 442, 1453
BmuI ACTGGG 1 cut(s) 329
BpmI CTGGAG 3 cut(s) 153, 214, 363
Bpu10I CCTNAGC 1 cut(s) 1209
BpuEI CTTGAG 2 cut(s) 862, 1302
BpuMI CCSGG 2 cut(s) 212, 213
BsaI GGTCTC 1 cut(s) 637
BsaJI CCNNGG 6 cut(s) 154, 211, 403, 412, 528, 749
BsaWI WCCGGW 4 cut(s) 467, 1452, 1561, 1602
BsaXI ACNNNNNCTCC 6 cut(s) 420, 450, 842, 872, 1146, 1176
Bsc4I CCNNNNNNNGG 5 cut(s) 384, 1031, 1362, 1459, 1488
Bse118I RCCGGY 2 cut(s) 1452, 1561
Bse1I ACTGG 2 cut(s) 324, 1025
BseBI CCWGG 4 cut(s) 193, 405, 414, 1483
BseDI CCNNGG 6 cut(s) 154, 211, 403, 412, 528, 749
BseGI GGATG 8 cut(s) 144, 457, 1069, 1351, 1468, 1497, 1523, 1599
BseLI CCNNNNNNNGG 5 cut(s) 384, 1031, 1362, 1459, 1488
BseMII CTCAG 1 cut(s) 1223
BseNI ACTGG 2 cut(s) 324, 1025
BseRI GAGGAG 1 cut(s) 1056
BseSI GKGCMC 2 cut(s) 1440, 1547
BseXI GCAGC 4 cut(s) 140, 248, 977, 1192
Bsh1236I CGCG 1 cut(s) 792
BshFI GGCC 2 cut(s) 288, 1250
BshNI GGYRCC 3 cut(s) 215, 1213, 1435
BshTI ACCGGT 2 cut(s) 1452, 1561
BsiHKAI GWGCWC 1 cut(s) 349
BsiHKCI CYCGRG 1 cut(s) 211
BsiSI CCGG 5 cut(s) 212, 468, 1453, 1562, 1603
BslFI GGGAC 2 cut(s) 336, 510
BslI CCNNNNNNNGG 5 cut(s) 384, 1031, 1362, 1459, 1488
BsmAI GTCTC 3 cut(s) 440, 637, 842
BsmFI GGGAC 2 cut(s) 336, 510
BsmI GAATGC 1 cut(s) 312
BsnI GGCC 2 cut(s) 288, 1250
Bso31I GGTCTC 1 cut(s) 637
BsoBI CYCGRG 1 cut(s) 211
Bsp1286I GDGCHC 3 cut(s) 349, 1440, 1547
Bsp143I GATC 5 cut(s) 368, 399, 576, 974, 1585
BspACI CCGC 2 cut(s) 629, 1460
BspANI GGCC 2 cut(s) 288, 1250
BspCNI CTCAG 1 cut(s) 1222
BspFNI CGCG 1 cut(s) 792
BspLI GGNNCC 5 cut(s) 217, 227, 401, 1215, 1437
BspMAI CTGCAG 1 cut(s) 967
BspPI GGATC 4 cut(s) 376, 394, 407, 1580
BspT107I GGYRCC 3 cut(s) 215, 1213, 1435
BspTI CTTAAG 1 cut(s) 1382
BspTNI GGTCTC 1 cut(s) 637
BsrBI CCGCTC 1 cut(s) 629
BsrFI RCCGGY 2 cut(s) 1452, 1561
BsrI ACTGG 2 cut(s) 324, 1025
BssAI RCCGGY 2 cut(s) 1452, 1561
BssECI CCNNGG 6 cut(s) 154, 211, 403, 412, 528, 749
BssMI GATC 5 cut(s) 368, 399, 576, 974, 1585
BssSI CACGAG 1 cut(s) 978
BssT1I CCWWGG 3 cut(s) 154, 528, 749
Bst2BI CACGAG 1 cut(s) 978
Bst2UI CCWGG 4 cut(s) 193, 405, 414, 1483
Bst4CI ACNGT 3 cut(s) 481, 615, 1549
BstAFI CTTAAG 1 cut(s) 1382
BstC8I GCNNGC 6 cut(s) 180, 189, 627, 963, 1218, 1479
BstDEI CTNAG 2 cut(s) 123, 1209
BstF5I GGATG 8 cut(s) 144, 457, 1069, 1351, 1468, 1497, 1523, 1599
BstFNI CGCG 1 cut(s) 792
BstKTI GATC 5 cut(s) 371, 402, 579, 977, 1588
BstMAI GTCTC 3 cut(s) 440, 637, 842
BstMBI GATC 5 cut(s) 368, 399, 576, 974, 1585
BstMWI GCNNNNNNNGC 7 cut(s) 106, 179, 184, 188, 299, 989, 1478
BstNI CCWGG 4 cut(s) 193, 405, 414, 1483
BstSCI CCNGG 6 cut(s) 191, 210, 211, 403, 412, 1481
BstSFI CTRYAG 1 cut(s) 963
BstSLI GKGCMC 2 cut(s) 1440, 1547
BstUI CGCG 1 cut(s) 792
BstV1I GCAGC 4 cut(s) 140, 248, 977, 1192
BstX2I RGATCY 3 cut(s) 368, 399, 974
BstYI RGATCY 3 cut(s) 368, 399, 974
BsuI GTATCC 2 cut(s) 419, 1383
BsuRI GGCC 2 cut(s) 288, 1250
BtsCI GGATG 8 cut(s) 144, 457, 1069, 1351, 1468, 1497, 1523, 1599
BtsIMutI CAGTG 2 cut(s) 863, 1044
Cac8I GCNNGC 6 cut(s) 180, 189, 627, 963, 1218, 1479
Cfr10I RCCGGY 2 cut(s) 1452, 1561
Cfr13I GGNCC 4 cut(s) 226, 739, 1249, 1559
Cfr9I CCCGGG 1 cut(s) 211
CspAI ACCGGT 2 cut(s) 1452, 1561
CviAII CATG 3 cut(s) 1259, 1431, 1442
DdeI CTNAG 2 cut(s) 123, 1209
DpnI GATC 5 cut(s) 370, 401, 578, 976, 1587
DpnII GATC 5 cut(s) 368, 399, 576, 974, 1585
Ecl136II GAGCTC 1 cut(s) 347
Eco130I CCWWGG 3 cut(s) 154, 528, 749
Eco24I GRGCYC 1 cut(s) 349
Eco31I GGTCTC 1 cut(s) 637
Eco32I GATATC 2 cut(s) 331, 949
Eco47I GGWCC 3 cut(s) 226, 739, 1559
Eco53kI GAGCTC 1 cut(s) 347
Eco57I CTGAAG 1 cut(s) 1260
Eco88I CYCGRG 1 cut(s) 211
EcoICRI GAGCTC 1 cut(s) 347
EcoRI GAATTC 1 cut(s) 868
EcoRII CCWGG 4 cut(s) 191, 403, 412, 1481
EcoRV GATATC 2 cut(s) 331, 949
EcoT14I CCWWGG 3 cut(s) 154, 528, 749
EcoT38I GRGCYC 1 cut(s) 349
ErhI CCWWGG 3 cut(s) 154, 528, 749
FaeI CATG 3 cut(s) 1262, 1434, 1445
FaqI GGGAC 2 cut(s) 336, 510
FatI CATG 3 cut(s) 1258, 1430, 1441
FauNDI CATATG 1 cut(s) 732
Fnu4HI GCNGC 4 cut(s) 129, 262, 966, 1206
FokI GGATG 8 cut(s) 151, 464, 1056, 1358, 1475, 1504, 1510, 1586
FriOI GRGCYC 1 cut(s) 349
Fsp4HI GCNGC 4 cut(s) 129, 262, 966, 1206
FspBI CTAG 5 cut(s) 155, 183, 873, 972, 1532
GluI GCNGC 4 cut(s) 129, 262, 966, 1206
GsuI CTGGAG 3 cut(s) 153, 214, 363
HaeIII GGCC 2 cut(s) 288, 1250
HapII CCGG 5 cut(s) 212, 468, 1453, 1562, 1603
Hin1II CATG 3 cut(s) 1262, 1434, 1445
HinfI GANTC 9 cut(s) 35, 358, 508, 587, 712, 719, 1307, 1313, 1502
HpaII CCGG 5 cut(s) 212, 468, 1453, 1562, 1603
Hpy166II GTNNAC 1 cut(s) 940
Hpy188I TCNGA 7 cut(s) 603, 1000, 1056, 1173, 1312, 1422, 1590
Hpy188III TCNNGA 7 cut(s) 26, 72, 254, 342, 563, 716, 841
Hpy8I GTNNAC 1 cut(s) 940
HpyAV CCTTC 5 cut(s) 608, 657, 661, 1083, 1480
HpyCH4III ACNGT 3 cut(s) 481, 615, 1549
HpyCH4V TGCA 6 cut(s) 207, 427, 688, 779, 802, 965
HpyF10VI GCNNNNNNNGC 7 cut(s) 106, 179, 184, 188, 299, 989, 1478
HpyF3I CTNAG 2 cut(s) 123, 1209
Hsp92II CATG 3 cut(s) 1262, 1434, 1445
Kzo9I GATC 5 cut(s) 368, 399, 576, 974, 1585
LmnI GCTCC 3 cut(s) 106, 344, 460
Lsp1109I GCAGC 4 cut(s) 140, 248, 977, 1192
LweI GCATC 3 cut(s) 160, 442, 1453
MaeI CTAG 5 cut(s) 155, 183, 873, 972, 1532
MaeIII GTNAC 2 cut(s) 470, 1012
MalI GATC 5 cut(s) 370, 401, 578, 976, 1587
MbiI CCGCTC 1 cut(s) 629
MboI GATC 5 cut(s) 368, 399, 576, 974, 1585
MboII GAAGA 7 cut(s) 363, 537, 586, 1053, 1089, 1186, 1344
MfeI CAATTG 3 cut(s) 723, 780, 954
MflI RGATCY 3 cut(s) 368, 399, 974
MhlI GDGCHC 3 cut(s) 349, 1440, 1547
MlyI GAGTC 3 cut(s) 596, 721, 1511
MmeI TCCRAC 3 cut(s) 978, 1132, 1138
MseI TTAA 9 cut(s) 237, 656, 1107, 1113, 1293, 1329, 1383, 1401, 1624
MspA1I CMGCKG 1 cut(s) 131
MspCI CTTAAG 1 cut(s) 1382
MspI CCGG 5 cut(s) 212, 468, 1453, 1562, 1603
MspR9I CCNGG 6 cut(s) 193, 212, 213, 405, 414, 1483
MunI CAATTG 3 cut(s) 723, 780, 954
Mva1269I GAATGC 1 cut(s) 312
MvaI CCWGG 4 cut(s) 193, 405, 414, 1483
MvnI CGCG 1 cut(s) 792
MwoI GCNNNNNNNGC 7 cut(s) 106, 179, 184, 188, 299, 989, 1478
NciI CCSGG 2 cut(s) 212, 213
NdeI CATATG 1 cut(s) 732
NdeII GATC 5 cut(s) 368, 399, 576, 974, 1585
NlaIII CATG 3 cut(s) 1262, 1434, 1445
NlaIV GGNNCC 5 cut(s) 217, 227, 401, 1215, 1437
PctI GAATGC 1 cut(s) 312
PfeI GAWTC 6 cut(s) 35, 358, 508, 719, 1307, 1313
PflMI CCANNNNNTGG 1 cut(s) 1031
PinAI ACCGGT 2 cut(s) 1452, 1561
PkrI GCNGC 4 cut(s) 130, 263, 967, 1207
PleI GAGTC 3 cut(s) 595, 720, 1510
PpsI GAGTC 3 cut(s) 595, 720, 1510
PshBI ATTAAT 2 cut(s) 1113, 1329
Psp124BI GAGCTC 1 cut(s) 349
Psp6I CCWGG 4 cut(s) 191, 403, 412, 1481
PspGI CCWGG 4 cut(s) 191, 403, 412, 1481
PspN4I GGNNCC 5 cut(s) 217, 227, 401, 1215, 1437
PspPI GGNCC 4 cut(s) 226, 739, 1249, 1559
PstI CTGCAG 1 cut(s) 967
PsuI RGATCY 3 cut(s) 368, 399, 974
PvuII CAGCTG 1 cut(s) 131
SacI GAGCTC 1 cut(s) 349
SaqAI TTAA 9 cut(s) 237, 656, 1107, 1113, 1293, 1329, 1383, 1401, 1624
SatI GCNGC 4 cut(s) 129, 262, 966, 1206
Sau3AI GATC 5 cut(s) 368, 399, 576, 974, 1585
Sau96I GGNCC 4 cut(s) 226, 739, 1249, 1559
SchI GAGTC 3 cut(s) 596, 721, 1511
ScrFI CCNGG 6 cut(s) 193, 212, 213, 405, 414, 1483
SduI GDGCHC 3 cut(s) 349, 1440, 1547
SfaNI GCATC 3 cut(s) 160, 442, 1453
SfcI CTRYAG 1 cut(s) 963
SinI GGWCC 3 cut(s) 226, 739, 1559
SmaI CCCGGG 1 cut(s) 213
SmlI CTYRAG 3 cut(s) 841, 1317, 1382
SmoI CTYRAG 3 cut(s) 841, 1317, 1382
SsiI CCGC 2 cut(s) 629, 1460
SspI AATATT 1 cut(s) 640
SspMI CTAG 5 cut(s) 155, 183, 873, 972, 1532
SstI GAGCTC 1 cut(s) 349
StyD4I CCNGG 6 cut(s) 191, 210, 211, 403, 412, 1481
StyI CCWWGG 3 cut(s) 154, 528, 749
TaaI ACNGT 3 cut(s) 481, 615, 1549
TaqI TCGA 1 cut(s) 925
TfiI GAWTC 6 cut(s) 35, 358, 508, 719, 1307, 1313
Tru1I TTAA 9 cut(s) 237, 656, 1107, 1113, 1293, 1329, 1383, 1401, 1624
Tru9I TTAA 9 cut(s) 237, 656, 1107, 1113, 1293, 1329, 1383, 1401, 1624
TscAI CASTG 2 cut(s) 870, 1044
TseI GCWGC 4 cut(s) 128, 261, 965, 1205
TspDTI ATGAA 3 cut(s) 80, 1458, 1588
TspMI CCCGGG 1 cut(s) 211
TspRI CASTG 2 cut(s) 870, 1044
Van91I CCANNNNNTGG 1 cut(s) 1031
Vha464I CTTAAG 1 cut(s) 1382
VpaK11BI GGWCC 3 cut(s) 226, 739, 1559
VspI ATTAAT 2 cut(s) 1113, 1329
XapI RAATTY 7 cut(s) 87, 231, 805, 868, 932, 1001, 1285
XmaI CCCGGG 1 cut(s) 211
XmaJI CCTAGG 1 cut(s) 154
XspI CTAG 5 cut(s) 155, 183, 873, 972, 1532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.