ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 349 |
| AccIII | TCCGGA | 1 cut(s) | 150 |
| AciI | CCGC | 1 cut(s) | 161 |
| AcsI | RAATTY | 2 cut(s) | 14, 154 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 157, 300 |
| AgsI | TTSAA | 3 cut(s) | 13, 169, 323 |
| AluBI | AGCT | 1 cut(s) | 23 |
| AluI | AGCT | 1 cut(s) | 23 |
| Alw26I | GTCTC | 1 cut(s) | 320 |
| Ama87I | CYCGRG | 1 cut(s) | 340 |
| Aor13HI | TCCGGA | 1 cut(s) | 150 |
| ApoI | RAATTY | 2 cut(s) | 14, 154 |
| AseI | ATTAAT | 1 cut(s) | 413 |
| AspLEI | GCGC | 1 cut(s) | 201 |
| AsuC2I | CCSGG | 1 cut(s) | 87 |
| AsuHPI | GGTGA | 1 cut(s) | 75 |
| AvaI | CYCGRG | 1 cut(s) | 340 |
| BanII | GRGCYC | 1 cut(s) | 30 |
| BcnI | CCSGG | 1 cut(s) | 87 |
| BcoDI | GTCTC | 1 cut(s) | 320 |
| BfaI | CTAG | 3 cut(s) | 272, 312, 408 |
| BfuAI | ACCTGC | 1 cut(s) | 349 |
| Bme1390I | CCNGG | 1 cut(s) | 87 |
| BmeT110I | CYCGRG | 1 cut(s) | 340 |
| BmiI | GGNNCC | 2 cut(s) | 149, 373 |
| BmrFI | CCNGG | 1 cut(s) | 87 |
| BmsI | GCATC | 2 cut(s) | 210, 340 |
| BpuMI | CCSGG | 1 cut(s) | 87 |
| BsaJI | CCNNGG | 1 cut(s) | 283 |
| BsaWI | WCCGGW | 1 cut(s) | 150 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 157, 300 |
| Bse1I | ACTGG | 2 cut(s) | 210, 404 |
| BseAI | TCCGGA | 1 cut(s) | 150 |
| BseDI | CCNNGG | 1 cut(s) | 283 |
| BseGI | GGATG | 1 cut(s) | 201 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 157, 300 |
| BseNI | ACTGG | 2 cut(s) | 210, 404 |
| BseYI | CCCAGC | 2 cut(s) | 19, 23 |
| BsiHKCI | CYCGRG | 1 cut(s) | 340 |
| BsiSI | CCGG | 2 cut(s) | 86, 151 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 157, 300 |
| BsmAI | GTCTC | 1 cut(s) | 320 |
| BsmI | GAATGC | 1 cut(s) | 79 |
| BsoBI | CYCGRG | 1 cut(s) | 340 |
| Bsp1286I | GDGCHC | 1 cut(s) | 30 |
| Bsp13I | TCCGGA | 1 cut(s) | 150 |
| BspACI | CCGC | 1 cut(s) | 161 |
| BspEI | TCCGGA | 1 cut(s) | 150 |
| BspLI | GGNNCC | 2 cut(s) | 149, 373 |
| BspMI | ACCTGC | 1 cut(s) | 349 |
| BsrI | ACTGG | 2 cut(s) | 210, 404 |
| BssECI | CCNNGG | 1 cut(s) | 283 |
| Bst4CI | ACNGT | 1 cut(s) | 7 |
| Bst6I | CTCTTC | 1 cut(s) | 301 |
| BstC8I | GCNNGC | 2 cut(s) | 183, 197 |
| BstDSI | CCRYGG | 1 cut(s) | 283 |
| BstF5I | GGATG | 1 cut(s) | 201 |
| BstHHI | GCGC | 1 cut(s) | 201 |
| BstMAI | GTCTC | 1 cut(s) | 320 |
| BstSCI | CCNGG | 1 cut(s) | 85 |
| BtgI | CCRYGG | 1 cut(s) | 283 |
| BtsCI | GGATG | 1 cut(s) | 201 |
| BveI | ACCTGC | 1 cut(s) | 349 |
| Cac8I | GCNNGC | 2 cut(s) | 183, 197 |
| CfoI | GCGC | 1 cut(s) | 201 |
| CviJI | RGCY | 8 cut(s) | 23, 28, 56, 110, 195, 278, 305, 372 |
| CviKI_1 | RGCY | 8 cut(s) | 23, 28, 56, 110, 195, 278, 305, 372 |
| Eam1104I | CTCTTC | 1 cut(s) | 301 |
| EarI | CTCTTC | 1 cut(s) | 301 |
| EciI | GGCGGA | 1 cut(s) | 176 |
| Eco24I | GRGCYC | 1 cut(s) | 30 |
| Eco88I | CYCGRG | 1 cut(s) | 340 |
| EcoT22I | ATGCAT | 2 cut(s) | 96, 223 |
| EcoT38I | GRGCYC | 1 cut(s) | 30 |
| FaiI | YATR | 2 cut(s) | 92, 252 |
| FokI | GGATG | 1 cut(s) | 188 |
| FriOI | GRGCYC | 1 cut(s) | 30 |
| FspBI | CTAG | 3 cut(s) | 272, 312, 408 |
| GlaI | GCGC | 1 cut(s) | 200 |
| GsaI | CCCAGC | 2 cut(s) | 23, 27 |
| HapII | CCGG | 2 cut(s) | 86, 151 |
| HhaI | GCGC | 1 cut(s) | 201 |
| Hin6I | GCGC | 1 cut(s) | 199 |
| HinP1I | GCGC | 1 cut(s) | 199 |
| HinfI | GANTC | 2 cut(s) | 234, 403 |
| HpaII | CCGG | 2 cut(s) | 86, 151 |
| HphI | GGTGA | 1 cut(s) | 75 |
| Hpy188III | TCNNGA | 2 cut(s) | 151, 388 |
| HpyAV | CCTTC | 3 cut(s) | 184, 317, 385 |
| HpyCH4III | ACNGT | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 3 cut(s) | 94, 185, 221 |
| HspAI | GCGC | 1 cut(s) | 199 |
| Kpn2I | TCCGGA | 1 cut(s) | 150 |
| LmnI | GCTCC | 2 cut(s) | 266, 377 |
| LweI | GCATC | 2 cut(s) | 210, 340 |
| MaeI | CTAG | 3 cut(s) | 272, 312, 408 |
| MboII | GAAGA | 2 cut(s) | 282, 288 |
| MhlI | GDGCHC | 1 cut(s) | 30 |
| MluCI | AATT | 4 cut(s) | 14, 58, 154, 378 |
| MlyI | GAGTC | 1 cut(s) | 243 |
| MnlI | CCTC | 5 cut(s) | 131, 267, 268, 304, 341 |
| Mph1103I | ATGCAT | 2 cut(s) | 96, 223 |
| MroI | TCCGGA | 1 cut(s) | 150 |
| MseI | TTAA | 1 cut(s) | 413 |
| MspA1I | CMGCKG | 1 cut(s) | 23 |
| MspI | CCGG | 2 cut(s) | 86, 151 |
| MspR9I | CCNGG | 1 cut(s) | 87 |
| Mva1269I | GAATGC | 1 cut(s) | 79 |
| NciI | CCSGG | 1 cut(s) | 87 |
| NlaIV | GGNNCC | 2 cut(s) | 149, 373 |
| NsiI | ATGCAT | 2 cut(s) | 96, 223 |
| PctI | GAATGC | 1 cut(s) | 79 |
| PfeI | GAWTC | 1 cut(s) | 403 |
| PleI | GAGTC | 1 cut(s) | 242 |
| PpsI | GAGTC | 1 cut(s) | 242 |
| PshBI | ATTAAT | 1 cut(s) | 413 |
| PspFI | CCCAGC | 2 cut(s) | 19, 23 |
| PspN4I | GGNNCC | 2 cut(s) | 149, 373 |
| PvuII | CAGCTG | 1 cut(s) | 23 |
| SaqAI | TTAA | 1 cut(s) | 413 |
| SchI | GAGTC | 1 cut(s) | 243 |
| ScrFI | CCNGG | 1 cut(s) | 87 |
| SduI | GDGCHC | 1 cut(s) | 30 |
| SetI | ASST | 4 cut(s) | 25, 142, 328, 363 |
| SfaNI | GCATC | 2 cut(s) | 210, 340 |
| Sse9I | AATT | 4 cut(s) | 14, 58, 154, 378 |
| SsiI | CCGC | 1 cut(s) | 161 |
| SspMI | CTAG | 3 cut(s) | 272, 312, 408 |
| StyD4I | CCNGG | 1 cut(s) | 85 |
| TaaI | ACNGT | 1 cut(s) | 7 |
| TasI | AATT | 4 cut(s) | 14, 58, 154, 378 |
| TfiI | GAWTC | 1 cut(s) | 403 |
| Tru1I | TTAA | 1 cut(s) | 413 |
| Tru9I | TTAA | 1 cut(s) | 413 |
| TspDTI | ATGAA | 1 cut(s) | 69 |
| VspI | ATTAAT | 1 cut(s) | 413 |
| XapI | RAATTY | 2 cut(s) | 14, 154 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 222 |
| XspI | CTAG | 3 cut(s) | 272, 312, 408 |
| Zsp2I | ATGCAT | 2 cut(s) | 96, 223 |