FvH4_1g29601

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000194
Physical Location & Seq
Reverse (-)
22850228 .. 22852280
2053 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29601.t1

Sequence Viewer

Length: 1746 bp
ATGGGTATTAGTGGTGTCTTAGGCATTCCTGGTTCTAATGACCCCGGGAAGTATTTGGGTTGCTTACTATGTGGGGAAATCGATTATGTGATTTCAAATTTTTTGTGGGGGCAATCTGATGTGGGTGAAAGGATTCATTGGTTGAGTTGGGAGAAATTGCGATTACCTAAGAATGAAGGTGGAATGGGGTTCAGATGTTTGAAATACTTTAATCTTGCATTGTTGGCTAAAGTTGGCTGGAGAATTATTCATCAGCCGAATGCTTTATGGGTTCTCAATGGTGAGTCAATTAATACTTGGAAGGATAGGTGGATTCCATGTATTCTTGGATGCAAGCTAGGTGCCTCCTATTTAGATGCTGGCGAGTTTGATCCTTATCAGAAGGTGGCTGATCTAATTGATTGGAATCAATATGTTTGGAATCTTTCTCCAATCATCCATCACCTTTCTTCGGAGGAAGTCACTGCCATTCGATCAATTCCTATTTCTGATACTTGGGAGCATGATCGTCTCATTTGGCCTATGGAGAAAAATGGTGAGTACAAAGTTCGTTCTGGTTATGATATGCAACATGCTAGTAGGAATTCCCCTTCACTTCAATCTATGGATTCCTCTCATATTATCAAGCCTGAAGTTTGGAAGTTTATTTGGTCATCTCTTACATTACCTAAAGTTAAGCATTTTCTCTGGAGAGTGTGCACTAATTCTCTACCTACAATGAAAAATTTGTTCTCTAAGAGAATTGCTCCATCTCCTATGTGTCCTTTTTGTTTATTATATGAAGAGTCAATAGAACATCTTCTATTGCAGTGTTCTTGGACAGCTGGAGTTTGGTTTAGATTGCCCATTTCTTACAAGGTTGACCCTGCTTTAATAACAACATTTGATGATTGGTTTTATGGTGTTTGTGGTCTATTGAAGCAGAATAGTAGAGCATGGGAAATATTATCTTGCTGGGTTTCCTTTGCATTATGGAATATTTGGAAGGAAATGTGTACTTTTTTATATGAGCATAGAGATCCAAATGCTTGGGGAGTAATTGAAAGTGTGAAGTATGTTGTTGCCGAGTTTTCTGGGATTACTGACCATCCTCCTCAAGTTGGTGTGGAAGAAAAATGTAAAATGAAGGATGGGCCTGATATGTGGAGTGCTCCCCTAGGCTTGAATATTAAGATCAATTGTGATGGTGCCTGGGATGCTTATAGTAATCTTGCAAGAATTGGAGTAATTGCAAGAAATTCCAGTGGTGCTGTAATCAATGGTTGTGCTAAATCTTGCTATTCTTCCTCTGCTTTGCATGCCGAAGCTTTTGCTGTTAAGGAGGGTTTGATCTTAGCTAAGAGTATGAATGCTACAACAATGTGTATTGAATTGGATTATGAACAGCTGTATAATGCAGTGGTGAAGAATTCTTCTCAAATCAGTTGGAGCATTTACCCTCTTCTTGTGGACATCAAGAGATTGAAGATTGGCCTGTTAAGTTGTATGTGGAGTTTGGTTAAGAGATTTAGAAACGCTGCGGGGAAGTGGCTTGCCAGGCAAGCTAAAAAGGGGATGTATTTGGGAGATTGGATCAATCACCCTCCATTATCTTTGCAACATGTGCTGAGATTAGATGGCTTGCCAGCTCCACCTCTAGATTTAGACTCATATATTTGTTTTGTTGTTCTGTTTTGCTTAGATGTTCAGTTTTGTTGTTTCTCTTTATGCAGCTTTTTGCTGTGTTTAATAAAGGAGAACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

582

Amino Acids

66.13

Weight (kDa)

7.43

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 182 - 278 2.1e-17 zinc-binding in reverse transcriptase
RVT_3 PF13456 393 - 515 1.8e-13 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 341, 1187
AciI CCGC 1 cut(s) 1520
AclWI GGATC 3 cut(s) 365, 1013, 1580
AcsI RAATTY 5 cut(s) 97, 583, 724, 1237, 1408
AcuI CTGAAG 1 cut(s) 651
AfaI GTAC 2 cut(s) 542, 997
AfiI CCNNNNNNNGG 2 cut(s) 451, 1100
AflIII ACRYGT 1 cut(s) 1600
AgsI TTSAA 8 cut(s) 96, 202, 599, 919, 1043, 1165, 1370, 1465
AjnI CCWGG 3 cut(s) 28, 1190, 1535
AluBI AGCT 8 cut(s) 337, 824, 1307, 1337, 1387, 1544, 1628, 1713
AluI AGCT 8 cut(s) 337, 824, 1307, 1337, 1387, 1544, 1628, 1713
Alw21I GWGCWC 2 cut(s) 701, 1153
Alw26I GTCTC 1 cut(s) 515
Alw44I GTGCAC 1 cut(s) 697
AlwI GGATC 3 cut(s) 365, 1013, 1580
Ama87I CYCGRG 1 cut(s) 44
AoxI GGCC 3 cut(s) 518, 1133, 1471
ApaLI GTGCAC 1 cut(s) 697
ApeKI GCWGC 2 cut(s) 1517, 1710
ApoI RAATTY 5 cut(s) 97, 583, 724, 1237, 1408
AseI ATTAAT 1 cut(s) 291
Asp700I GAANNNNTTC 2 cut(s) 132, 798
AspA2I CCTAGG 1 cut(s) 1156
AspS9I GGNCC 1 cut(s) 1133
AsuC2I CCSGG 2 cut(s) 45, 46
AsuHPI GGTGA 6 cut(s) 137, 293, 434, 548, 1414, 1571
AvaI CYCGRG 1 cut(s) 44
AvrII CCTAGG 1 cut(s) 1156
BaeGI GKGCMC 1 cut(s) 701
BanI GGYRCC 2 cut(s) 341, 1187
Bbv12I GWGCWC 2 cut(s) 701, 1153
BbvI GCAGC 2 cut(s) 1504, 1722
BccI CCATC 6 cut(s) 447, 757, 1095, 1124, 1178, 1610
BcgI CGANNNNNNTGC 2 cut(s) 1292, 1326
BciT130I CCWGG 3 cut(s) 30, 1192, 1537
BcnI CCSGG 2 cut(s) 45, 46
BcoDI GTCTC 1 cut(s) 515
BfaI CTAG 4 cut(s) 338, 576, 1157, 1637
BisI GCNGC 2 cut(s) 1518, 1711
BlnI CCTAGG 1 cut(s) 1156
BlsI GCNGC 2 cut(s) 1519, 1712
Bme1390I CCNGG 5 cut(s) 30, 45, 46, 1192, 1537
BmeT110I CYCGRG 1 cut(s) 44
BmgT120I GGNCC 1 cut(s) 1133
BmiI GGNNCC 2 cut(s) 343, 1189
BmrFI CCNGG 5 cut(s) 30, 45, 46, 1192, 1537
BmsI GCATC 3 cut(s) 320, 346, 1186
BplI GAGNNNNNCTC 2 cut(s) 730, 762
BpmI CTGGAG 3 cut(s) 259, 709, 846
BpuEI CTTGAG 1 cut(s) 1080
BpuMI CCSGG 2 cut(s) 45, 46
Bsa29I ATCGAT 1 cut(s) 81
BsaBI GATNNNNATC 2 cut(s) 375, 405
BsaJI CCNNGG 4 cut(s) 43, 44, 1156, 1191
Bsc4I CCNNNNNNNGG 2 cut(s) 451, 1100
Bse1I ACTGG 1 cut(s) 1242
Bse8I GATNNNNATC 2 cut(s) 375, 405
BseBI CCWGG 3 cut(s) 30, 1192, 1537
BseCI ATCGAT 1 cut(s) 81
BseDI CCNNGG 4 cut(s) 43, 44, 1156, 1191
BseGI GGATG 6 cut(s) 335, 435, 1087, 1135, 1201, 1560
BseJI GATNNNNATC 2 cut(s) 375, 405
BseLI CCNNNNNNNGG 2 cut(s) 451, 1100
BseMII CTCAG 1 cut(s) 1598
BseNI ACTGG 1 cut(s) 1242
BseRI GAGGAG 1 cut(s) 1083
BseSI GKGCMC 1 cut(s) 701
BseXI GCAGC 2 cut(s) 1504, 1722
BseYI CCCAGC 1 cut(s) 954
BshFI GGCC 3 cut(s) 520, 1135, 1473
BshNI GGYRCC 2 cut(s) 341, 1187
BshVI ATCGAT 1 cut(s) 81
BsiHKAI GWGCWC 2 cut(s) 701, 1153
BsiHKCI CYCGRG 1 cut(s) 44
BsiSI CCGG 1 cut(s) 45
BslI CCNNNNNNNGG 2 cut(s) 451, 1100
BsmAI GTCTC 1 cut(s) 515
BsmBI CGTCTC 1 cut(s) 515
BsmI GAATGC 3 cut(s) 24, 265, 1354
BsnI GGCC 3 cut(s) 520, 1135, 1473
BsoBI CYCGRG 1 cut(s) 44
Bsp1286I GDGCHC 2 cut(s) 701, 1153
Bsp143I GATC 8 cut(s) 370, 391, 473, 505, 1018, 1173, 1329, 1572
BspACI CCGC 1 cut(s) 1520
BspANI GGCC 3 cut(s) 520, 1135, 1473
BspCNI CTCAG 1 cut(s) 1599
BspDI ATCGAT 1 cut(s) 81
BspLI GGNNCC 2 cut(s) 343, 1189
BspPI GGATC 3 cut(s) 365, 1013, 1580
BspT107I GGYRCC 2 cut(s) 341, 1187
BsrI ACTGG 1 cut(s) 1242
BssECI CCNNGG 4 cut(s) 43, 44, 1156, 1191
BssMI GATC 8 cut(s) 370, 391, 473, 505, 1018, 1173, 1329, 1572
BssT1I CCWWGG 1 cut(s) 1156
Bst2UI CCWGG 3 cut(s) 30, 1192, 1537
Bst6I CTCTTC 2 cut(s) 777, 1446
BstAPI GCANNNNNTGC 1 cut(s) 1603
BstC8I GCNNGC 7 cut(s) 335, 361, 1299, 1533, 1542, 1622, 1626
BstDEI CTNAG 7 cut(s) 19, 168, 735, 1333, 1338, 1607, 1678
BstF5I GGATG 6 cut(s) 335, 435, 1087, 1135, 1201, 1560
BstKTI GATC 8 cut(s) 373, 394, 476, 508, 1021, 1176, 1332, 1575
BstMAI GTCTC 1 cut(s) 515
BstMBI GATC 8 cut(s) 370, 391, 473, 505, 1018, 1173, 1329, 1572
BstMWI GCNNNNNNNGC 6 cut(s) 224, 1196, 1298, 1537, 1541, 1603
BstNI CCWGG 3 cut(s) 30, 1192, 1537
BstNSI RCATGY 3 cut(s) 575, 1301, 1604
BstSCI CCNGG 5 cut(s) 28, 43, 44, 1190, 1535
BstSLI GKGCMC 1 cut(s) 701
BstV1I GCAGC 2 cut(s) 1504, 1722
BstX2I RGATCY 1 cut(s) 1018
BstXI CCANNNNNNTGG 1 cut(s) 1029
BstYI RGATCY 1 cut(s) 1018
Bsu15I ATCGAT 1 cut(s) 81
BsuRI GGCC 3 cut(s) 520, 1135, 1473
BsuTUI ATCGAT 1 cut(s) 81
BtsCI GGATG 6 cut(s) 335, 435, 1087, 1135, 1201, 1560
BtsI GCAGTG 3 cut(s) 462, 815, 1404
BtsIMutI CAGTG 4 cut(s) 462, 815, 1249, 1404
Cac8I GCNNGC 7 cut(s) 335, 361, 1299, 1533, 1542, 1622, 1626
Cfr13I GGNCC 1 cut(s) 1133
Cfr9I CCCGGG 1 cut(s) 44
ClaI ATCGAT 1 cut(s) 81
Csp6I GTAC 2 cut(s) 541, 996
CviAII CATG 6 cut(s) 318, 503, 572, 936, 1298, 1601
CviQI GTAC 2 cut(s) 541, 996
DdeI CTNAG 7 cut(s) 19, 168, 735, 1333, 1338, 1607, 1678
DpnI GATC 8 cut(s) 372, 393, 475, 507, 1020, 1175, 1331, 1574
DpnII GATC 8 cut(s) 370, 391, 473, 505, 1018, 1173, 1329, 1572
Eam1104I CTCTTC 2 cut(s) 777, 1446
EarI CTCTTC 2 cut(s) 777, 1446
Eco130I CCWWGG 1 cut(s) 1156
Eco57I CTGAAG 1 cut(s) 651
Eco88I CYCGRG 1 cut(s) 44
EcoRI GAATTC 2 cut(s) 583, 1408
EcoRII CCWGG 3 cut(s) 28, 1190, 1535
EcoT14I CCWWGG 1 cut(s) 1156
ErhI CCWWGG 1 cut(s) 1156
Esp3I CGTCTC 1 cut(s) 515
FaeI CATG 6 cut(s) 321, 506, 575, 939, 1301, 1604
FalI AAGNNNNNCTT 1 cut(s) 1724
FatI CATG 6 cut(s) 317, 502, 571, 935, 1297, 1600
FauI CCCGC 1 cut(s) 1513
Fnu4HI GCNGC 2 cut(s) 1518, 1711
FokI GGATG 6 cut(s) 342, 422, 1074, 1142, 1208, 1567
Fsp4HI GCNGC 2 cut(s) 1518, 1711
FspBI CTAG 4 cut(s) 338, 576, 1157, 1637
GluI GCNGC 2 cut(s) 1518, 1711
GsaI CCCAGC 1 cut(s) 958
GsuI CTGGAG 3 cut(s) 259, 709, 846
HaeIII GGCC 3 cut(s) 520, 1135, 1473
HapII CCGG 1 cut(s) 45
Hin1II CATG 6 cut(s) 321, 506, 575, 939, 1301, 1604
HincII GTYRAC 1 cut(s) 862
HindII GTYRAC 1 cut(s) 862
HindIII AAGCTT 1 cut(s) 1305
HinfI GANTC 8 cut(s) 133, 284, 313, 406, 421, 608, 785, 1646
HpaII CCGG 1 cut(s) 45
HphI GGTGA 6 cut(s) 137, 293, 434, 548, 1414, 1571
Hpy166II GTNNAC 4 cut(s) 699, 862, 996, 1450
Hpy188I TCNGA 5 cut(s) 118, 194, 381, 454, 490
Hpy188III TCNNGA 3 cut(s) 688, 1456, 1637
Hpy8I GTNNAC 4 cut(s) 699, 862, 996, 1450
HpyAV CCTTC 6 cut(s) 170, 295, 376, 600, 979, 1120
HpyF10VI GCNNNNNNNGC 6 cut(s) 224, 1196, 1298, 1537, 1541, 1603
HpyF3I CTNAG 7 cut(s) 19, 168, 735, 1333, 1338, 1607, 1678
Hsp92II CATG 6 cut(s) 321, 506, 575, 939, 1301, 1604
Kzo9I GATC 8 cut(s) 370, 391, 473, 505, 1018, 1173, 1329, 1572
LmnI GCTCC 5 cut(s) 499, 751, 1156, 1428, 1633
Lsp1109I GCAGC 2 cut(s) 1504, 1722
LweI GCATC 3 cut(s) 320, 346, 1186
MaeI CTAG 4 cut(s) 338, 576, 1157, 1637
MaeIII GTNAC 1 cut(s) 460
MalI GATC 8 cut(s) 372, 393, 475, 507, 1020, 1175, 1331, 1574
MboI GATC 8 cut(s) 370, 391, 473, 505, 1018, 1173, 1329, 1572
MboII GAAGA 9 cut(s) 441, 791, 794, 1121, 1275, 1404, 1417, 1433, 1477
MfeI CAATTG 1 cut(s) 1177
MflI RGATCY 1 cut(s) 1018
MhlI GDGCHC 2 cut(s) 701, 1153
MlyI GAGTC 3 cut(s) 293, 794, 1640
MmeI TCCRAC 1 cut(s) 1406
MroXI GAANNNNTTC 2 cut(s) 132, 798
MspA1I CMGCKG 2 cut(s) 824, 1387
MspI CCGG 1 cut(s) 45
MspR9I CCNGG 5 cut(s) 30, 45, 46, 1192, 1537
MunI CAATTG 1 cut(s) 1177
Mva1269I GAATGC 3 cut(s) 24, 265, 1354
MvaI CCWGG 3 cut(s) 30, 1192, 1537
MwoI GCNNNNNNNGC 6 cut(s) 224, 1196, 1298, 1537, 1541, 1603
NciI CCSGG 2 cut(s) 45, 46
NdeII GATC 8 cut(s) 370, 391, 473, 505, 1018, 1173, 1329, 1572
NlaIII CATG 6 cut(s) 321, 506, 575, 939, 1301, 1604
NlaIV GGNNCC 2 cut(s) 343, 1189
NmeAIII GCCGAG 1 cut(s) 1090
NmuCI GTSAC 1 cut(s) 460
NspI RCATGY 3 cut(s) 575, 1301, 1604
PaeI GCATGC 1 cut(s) 1301
PciI ACATGT 1 cut(s) 1600
PctI GAATGC 3 cut(s) 24, 265, 1354
PdmI GAANNNNTTC 2 cut(s) 132, 798
PfeI GAWTC 5 cut(s) 133, 313, 406, 421, 608
PkrI GCNGC 2 cut(s) 1519, 1712
PleI GAGTC 3 cut(s) 292, 793, 1640
PpsI GAGTC 3 cut(s) 292, 793, 1640
PscI ACATGT 1 cut(s) 1600
PshBI ATTAAT 1 cut(s) 291
Psp6I CCWGG 3 cut(s) 28, 1190, 1535
PspFI CCCAGC 1 cut(s) 954
PspGI CCWGG 3 cut(s) 28, 1190, 1535
PspN4I GGNNCC 2 cut(s) 343, 1189
PspPI GGNCC 1 cut(s) 1133
PsuI RGATCY 1 cut(s) 1018
PvuII CAGCTG 2 cut(s) 824, 1387
RsaI GTAC 2 cut(s) 542, 997
RsaNI GTAC 2 cut(s) 541, 996
SatI GCNGC 2 cut(s) 1518, 1711
Sau3AI GATC 8 cut(s) 370, 391, 473, 505, 1018, 1173, 1329, 1572
Sau96I GGNCC 1 cut(s) 1133
SchI GAGTC 3 cut(s) 293, 794, 1640
ScrFI CCNGG 5 cut(s) 30, 45, 46, 1192, 1537
SduI GDGCHC 2 cut(s) 701, 1153
SfaNI GCATC 3 cut(s) 320, 346, 1186
SmaI CCCGGG 1 cut(s) 46
SmlI CTYRAG 1 cut(s) 1095
SmoI CTYRAG 1 cut(s) 1095
SphI GCATGC 1 cut(s) 1301
SsiI CCGC 1 cut(s) 1520
SspI AATATT 3 cut(s) 945, 979, 1168
SspMI CTAG 4 cut(s) 338, 576, 1157, 1637
StyD4I CCNGG 5 cut(s) 28, 43, 44, 1190, 1535
StyI CCWWGG 1 cut(s) 1156
TaqI TCGA 2 cut(s) 81, 472
TatI WGTACW 2 cut(s) 540, 995
TfiI GAWTC 5 cut(s) 133, 313, 406, 421, 608
TscAI CASTG 4 cut(s) 469, 815, 1249, 1404
TseFI GTSAC 1 cut(s) 460
TseI GCWGC 2 cut(s) 1517, 1710
Tsp45I GTSAC 1 cut(s) 460
TspDTI ATGAA 8 cut(s) 125, 189, 239, 734, 795, 1139, 1361, 1395
TspMI CCCGGG 1 cut(s) 44
TspRI CASTG 4 cut(s) 469, 815, 1249, 1404
VneI GTGCAC 1 cut(s) 697
VspI ATTAAT 1 cut(s) 291
XapI RAATTY 5 cut(s) 97, 583, 724, 1237, 1408
XbaI TCTAGA 1 cut(s) 1636
XceI RCATGY 3 cut(s) 575, 1301, 1604
XmaI CCCGGG 1 cut(s) 44
XmaJI CCTAGG 1 cut(s) 1156
XmnI GAANNNNTTC 2 cut(s) 132, 798
XspI CTAG 4 cut(s) 338, 576, 1157, 1637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.