ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 73 |
| AcsI | RAATTY | 2 cut(s) | 201, 490 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AfaI | GTAC | 4 cut(s) | 156, 198, 316, 432 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 386 |
| AgsI | TTSAA | 1 cut(s) | 208 |
| AjnI | CCWGG | 2 cut(s) | 97, 212 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 480, 512 |
| AlwI | GGATC | 1 cut(s) | 73 |
| AoxI | GGCC | 2 cut(s) | 210, 569 |
| ApeKI | GCWGC | 1 cut(s) | 452 |
| ApoI | RAATTY | 2 cut(s) | 201, 490 |
| AseI | ATTAAT | 1 cut(s) | 402 |
| AspS9I | GGNCC | 2 cut(s) | 83, 389 |
| AsuC2I | CCSGG | 1 cut(s) | 81 |
| AsuHPI | GGTGA | 2 cut(s) | 163, 551 |
| AvaII | GGWCC | 2 cut(s) | 83, 389 |
| BbvI | GCAGC | 1 cut(s) | 439 |
| BccI | CCATC | 3 cut(s) | 55, 83, 382 |
| BciT130I | CCWGG | 2 cut(s) | 99, 214 |
| BcnI | CCSGG | 1 cut(s) | 81 |
| BfaI | CTAG | 1 cut(s) | 279 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 269 |
| BglII | AGATCT | 1 cut(s) | 581 |
| BisI | GCNGC | 1 cut(s) | 453 |
| BlpI | GCTNAGC | 1 cut(s) | 627 |
| BlsI | GCNGC | 1 cut(s) | 454 |
| BmcAI | AGTACT | 1 cut(s) | 432 |
| Bme1390I | CCNGG | 3 cut(s) | 81, 99, 214 |
| Bme18I | GGWCC | 2 cut(s) | 83, 389 |
| BmgT120I | GGNCC | 2 cut(s) | 83, 389 |
| BmiI | GGNNCC | 1 cut(s) | 84 |
| BmrFI | CCNGG | 3 cut(s) | 81, 99, 214 |
| BmsI | GCATC | 1 cut(s) | 412 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 627 |
| BpuMI | CCSGG | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 2 cut(s) | 97, 572 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 386 |
| Bse1I | ACTGG | 3 cut(s) | 334, 371, 438 |
| Bse3DI | GCAATG | 1 cut(s) | 340 |
| BseBI | CCWGG | 2 cut(s) | 99, 214 |
| BseDI | CCNNGG | 2 cut(s) | 97, 572 |
| BseGI | GGATG | 1 cut(s) | 427 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 386 |
| BseMI | GCAATG | 1 cut(s) | 340 |
| BseMII | CTCAG | 1 cut(s) | 28 |
| BseNI | ACTGG | 3 cut(s) | 334, 371, 438 |
| BseRI | GAGGAG | 1 cut(s) | 369 |
| BseXI | GCAGC | 1 cut(s) | 439 |
| BshFI | GGCC | 2 cut(s) | 212, 571 |
| BsiSI | CCGG | 1 cut(s) | 80 |
| BslFI | GGGAC | 1 cut(s) | 137 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 386 |
| BsmFI | GGGAC | 1 cut(s) | 137 |
| BsmI | GAATGC | 1 cut(s) | 247 |
| BsnI | GGCC | 2 cut(s) | 212, 571 |
| Bsp143I | GATC | 3 cut(s) | 65, 442, 581 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 627 |
| BspANI | GGCC | 2 cut(s) | 212, 571 |
| BspCNI | CTCAG | 1 cut(s) | 27 |
| BspLI | GGNNCC | 1 cut(s) | 84 |
| BspPI | GGATC | 1 cut(s) | 73 |
| BsrDI | GCAATG | 1 cut(s) | 340 |
| BsrI | ACTGG | 3 cut(s) | 334, 371, 438 |
| BssECI | CCNNGG | 2 cut(s) | 97, 572 |
| BssMI | GATC | 3 cut(s) | 65, 442, 581 |
| BssT1I | CCWWGG | 1 cut(s) | 572 |
| Bst2UI | CCWGG | 2 cut(s) | 99, 214 |
| Bst4CI | ACNGT | 3 cut(s) | 154, 175, 550 |
| BstDEI | CTNAG | 3 cut(s) | 14, 249, 627 |
| BstF5I | GGATG | 1 cut(s) | 427 |
| BstKTI | GATC | 3 cut(s) | 68, 445, 584 |
| BstMBI | GATC | 3 cut(s) | 65, 442, 581 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 269 |
| BstNI | CCWGG | 2 cut(s) | 99, 214 |
| BstSCI | CCNGG | 3 cut(s) | 79, 97, 212 |
| BstV1I | GCAGC | 1 cut(s) | 439 |
| BstX2I | RGATCY | 1 cut(s) | 581 |
| BstYI | RGATCY | 1 cut(s) | 581 |
| BsuRI | GGCC | 2 cut(s) | 212, 571 |
| BtsCI | GGATG | 1 cut(s) | 427 |
| BtsIMutI | CAGTG | 1 cut(s) | 150 |
| Cfr13I | GGNCC | 2 cut(s) | 83, 389 |
| Csp6I | GTAC | 4 cut(s) | 155, 197, 315, 431 |
| CviAII | CATG | 3 cut(s) | 273, 595, 623 |
| CviJI | RGCY | 4 cut(s) | 212, 370, 571, 609 |
| CviKI_1 | RGCY | 4 cut(s) | 212, 370, 571, 609 |
| CviQI | GTAC | 4 cut(s) | 155, 197, 315, 431 |
| DdeI | CTNAG | 3 cut(s) | 14, 249, 627 |
| DpnI | GATC | 3 cut(s) | 67, 444, 583 |
| DpnII | GATC | 3 cut(s) | 65, 442, 581 |
| Eco130I | CCWWGG | 1 cut(s) | 572 |
| Eco47I | GGWCC | 2 cut(s) | 83, 389 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| EcoRII | CCWGG | 2 cut(s) | 97, 212 |
| EcoT14I | CCWWGG | 1 cut(s) | 572 |
| ErhI | CCWWGG | 1 cut(s) | 572 |
| FaeI | CATG | 3 cut(s) | 276, 598, 626 |
| FaiI | YATR | 4 cut(s) | 274, 530, 596, 624 |
| FaqI | GGGAC | 1 cut(s) | 137 |
| FatI | CATG | 3 cut(s) | 272, 594, 622 |
| Fnu4HI | GCNGC | 1 cut(s) | 453 |
| FokI | GGATG | 1 cut(s) | 434 |
| Fsp4HI | GCNGC | 1 cut(s) | 453 |
| FspBI | CTAG | 1 cut(s) | 279 |
| GluI | GCNGC | 1 cut(s) | 453 |
| HaeIII | GGCC | 2 cut(s) | 212, 571 |
| HapII | CCGG | 1 cut(s) | 80 |
| Hin1II | CATG | 3 cut(s) | 276, 598, 626 |
| HinfI | GANTC | 2 cut(s) | 93, 458 |
| HpaII | CCGG | 1 cut(s) | 80 |
| HphI | GGTGA | 2 cut(s) | 163, 551 |
| Hpy188I | TCNGA | 2 cut(s) | 60, 240 |
| Hpy188III | TCNNGA | 2 cut(s) | 86, 500 |
| HpyAV | CCTTC | 1 cut(s) | 202 |
| HpyCH4III | ACNGT | 3 cut(s) | 154, 175, 550 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 269 |
| HpyF3I | CTNAG | 3 cut(s) | 14, 249, 627 |
| Hsp92II | CATG | 3 cut(s) | 276, 598, 626 |
| Kzo9I | GATC | 3 cut(s) | 65, 442, 581 |
| LmnI | GCTCC | 2 cut(s) | 338, 412 |
| Lsp1109I | GCAGC | 1 cut(s) | 439 |
| LweI | GCATC | 1 cut(s) | 412 |
| MaeI | CTAG | 1 cut(s) | 279 |
| MalI | GATC | 3 cut(s) | 67, 444, 583 |
| MboI | GATC | 3 cut(s) | 65, 442, 581 |
| MflI | RGATCY | 1 cut(s) | 581 |
| MluCI | AATT | 2 cut(s) | 201, 490 |
| MlyI | GAGTC | 1 cut(s) | 452 |
| MnlI | CCTC | 2 cut(s) | 274, 390 |
| MseI | TTAA | 5 cut(s) | 72, 132, 167, 402, 438 |
| MspI | CCGG | 1 cut(s) | 80 |
| MspR9I | CCNGG | 3 cut(s) | 81, 99, 214 |
| Mva1269I | GAATGC | 1 cut(s) | 247 |
| MvaI | CCWGG | 2 cut(s) | 99, 214 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 269 |
| NciI | CCSGG | 1 cut(s) | 81 |
| NdeII | GATC | 3 cut(s) | 65, 442, 581 |
| NlaIII | CATG | 3 cut(s) | 276, 598, 626 |
| NlaIV | GGNNCC | 1 cut(s) | 84 |
| PctI | GAATGC | 1 cut(s) | 247 |
| PfeI | GAWTC | 1 cut(s) | 93 |
| PkrI | GCNGC | 1 cut(s) | 454 |
| PleI | GAGTC | 1 cut(s) | 452 |
| PpsI | GAGTC | 1 cut(s) | 452 |
| PshBI | ATTAAT | 1 cut(s) | 402 |
| Psp6I | CCWGG | 2 cut(s) | 97, 212 |
| PspGI | CCWGG | 2 cut(s) | 97, 212 |
| PspN4I | GGNNCC | 1 cut(s) | 84 |
| PspPI | GGNCC | 2 cut(s) | 83, 389 |
| PsuI | RGATCY | 1 cut(s) | 581 |
| RsaI | GTAC | 4 cut(s) | 156, 198, 316, 432 |
| RsaNI | GTAC | 4 cut(s) | 155, 197, 315, 431 |
| SaqAI | TTAA | 5 cut(s) | 72, 132, 167, 402, 438 |
| SatI | GCNGC | 1 cut(s) | 453 |
| Sau3AI | GATC | 3 cut(s) | 65, 442, 581 |
| Sau96I | GGNCC | 2 cut(s) | 83, 389 |
| ScaI | AGTACT | 1 cut(s) | 432 |
| SchI | GAGTC | 1 cut(s) | 452 |
| ScrFI | CCNGG | 3 cut(s) | 81, 99, 214 |
| SetI | ASST | 2 cut(s) | 218, 316 |
| SfaNI | GCATC | 1 cut(s) | 412 |
| SinI | GGWCC | 2 cut(s) | 83, 389 |
| Sse9I | AATT | 2 cut(s) | 201, 490 |
| SspI | AATATT | 1 cut(s) | 346 |
| SspMI | CTAG | 1 cut(s) | 279 |
| StyD4I | CCNGG | 3 cut(s) | 79, 97, 212 |
| StyI | CCWWGG | 1 cut(s) | 572 |
| TaaI | ACNGT | 3 cut(s) | 154, 175, 550 |
| TaqI | TCGA | 1 cut(s) | 477 |
| TasI | AATT | 2 cut(s) | 201, 490 |
| TatI | WGTACW | 2 cut(s) | 154, 430 |
| TfiI | GAWTC | 1 cut(s) | 93 |
| Tru1I | TTAA | 5 cut(s) | 72, 132, 167, 402, 438 |
| Tru9I | TTAA | 5 cut(s) | 72, 132, 167, 402, 438 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TseI | GCWGC | 1 cut(s) | 452 |
| TspDTI | ATGAA | 1 cut(s) | 51 |
| TspRI | CASTG | 1 cut(s) | 157 |
| VpaK11BI | GGWCC | 2 cut(s) | 83, 389 |
| VspI | ATTAAT | 1 cut(s) | 402 |
| XapI | RAATTY | 2 cut(s) | 201, 490 |
| XspI | CTAG | 1 cut(s) | 279 |
| ZrmI | AGTACT | 1 cut(s) | 432 |