Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 310 |
| AclWI | GGATC | 3 cut(s) | 271, 284, 440 |
| AcoI | YGGCCR | 2 cut(s) | 58, 419 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 120, 286 |
| AgsI | TTSAA | 2 cut(s) | 441, 532 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 177, 209 |
| AluBI | AGCT | 1 cut(s) | 415 |
| AluI | AGCT | 1 cut(s) | 415 |
| Alw26I | GTCTC | 1 cut(s) | 297 |
| AlwI | GGATC | 3 cut(s) | 271, 284, 440 |
| AoxI | GGCC | 4 cut(s) | 58, 122, 227, 419 |
| ApeKI | GCWGC | 1 cut(s) | 454 |
| AspS9I | GGNCC | 2 cut(s) | 199, 312 |
| AsuHPI | GGTGA | 1 cut(s) | 452 |
| AsuII | TTCGAA | 1 cut(s) | 384 |
| AvaII | GGWCC | 2 cut(s) | 199, 312 |
| BalI | TGGCCA | 2 cut(s) | 60, 421 |
| BamHI | GGATCC | 1 cut(s) | 276 |
| BbvI | GCAGC | 1 cut(s) | 441 |
| BccI | CCATC | 2 cut(s) | 30, 69 |
| BcoDI | GTCTC | 1 cut(s) | 297 |
| BisI | GCNGC | 1 cut(s) | 455 |
| BlsI | GCNGC | 1 cut(s) | 456 |
| Bme18I | GGWCC | 2 cut(s) | 199, 312 |
| BmgT120I | GGNCC | 2 cut(s) | 199, 312 |
| BmiI | GGNNCC | 4 cut(s) | 42, 200, 201, 278 |
| BpmI | CTGGAG | 1 cut(s) | 254 |
| Bpu14I | TTCGAA | 1 cut(s) | 384 |
| BpuEI | CTTGAG | 1 cut(s) | 117 |
| BsaJI | CCNNGG | 1 cut(s) | 523 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 120, 286 |
| Bse3DI | GCAATG | 1 cut(s) | 217 |
| BseDI | CCNNGG | 1 cut(s) | 523 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 120, 286 |
| BseMI | GCAATG | 1 cut(s) | 217 |
| BseRI | GAGGAG | 1 cut(s) | 307 |
| BseXI | GCAGC | 1 cut(s) | 441 |
| BshFI | GGCC | 4 cut(s) | 60, 124, 229, 421 |
| BsiSI | CCGG | 1 cut(s) | 121 |
| BslFI | GGGAC | 1 cut(s) | 212 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 120, 286 |
| BsmAI | GTCTC | 1 cut(s) | 297 |
| BsmFI | GGGAC | 1 cut(s) | 212 |
| BsnI | GGCC | 4 cut(s) | 60, 124, 229, 421 |
| Bsp119I | TTCGAA | 1 cut(s) | 384 |
| Bsp143I | GATC | 3 cut(s) | 168, 276, 432 |
| Bsp19I | CCATGG | 1 cut(s) | 523 |
| BspACI | CCGC | 1 cut(s) | 310 |
| BspANI | GGCC | 4 cut(s) | 60, 124, 229, 421 |
| BspLI | GGNNCC | 4 cut(s) | 42, 200, 201, 278 |
| BspPI | GGATC | 3 cut(s) | 271, 284, 440 |
| BspT104I | TTCGAA | 1 cut(s) | 384 |
| BsrDI | GCAATG | 1 cut(s) | 217 |
| BssECI | CCNNGG | 1 cut(s) | 523 |
| BssMI | GATC | 3 cut(s) | 168, 276, 432 |
| BssT1I | CCWWGG | 1 cut(s) | 523 |
| Bst4CI | ACNGT | 1 cut(s) | 162 |
| Bst6I | CTCTTC | 1 cut(s) | 442 |
| BstBI | TTCGAA | 1 cut(s) | 384 |
| BstDEI | CTNAG | 1 cut(s) | 377 |
| BstDSI | CCRYGG | 1 cut(s) | 523 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstKTI | GATC | 3 cut(s) | 171, 279, 435 |
| BstMAI | GTCTC | 1 cut(s) | 297 |
| BstMBI | GATC | 3 cut(s) | 168, 276, 432 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 476 |
| BstV1I | GCAGC | 1 cut(s) | 441 |
| BstX2I | RGATCY | 2 cut(s) | 276, 432 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 429 |
| BstYI | RGATCY | 2 cut(s) | 276, 432 |
| BsuRI | GGCC | 4 cut(s) | 60, 124, 229, 421 |
| BtgI | CCRYGG | 1 cut(s) | 523 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| BtsIMutI | CAGTG | 1 cut(s) | 167 |
| Cfr13I | GGNCC | 2 cut(s) | 199, 312 |
| CviAII | CATG | 2 cut(s) | 150, 524 |
| CviJI | RGCY | 7 cut(s) | 60, 80, 124, 140, 229, 415, 421 |
| CviKI_1 | RGCY | 7 cut(s) | 60, 80, 124, 140, 229, 415, 421 |
| DdeI | CTNAG | 1 cut(s) | 377 |
| DpnI | GATC | 3 cut(s) | 170, 278, 434 |
| DpnII | GATC | 3 cut(s) | 168, 276, 432 |
| EaeI | YGGCCR | 2 cut(s) | 58, 419 |
| Eam1104I | CTCTTC | 1 cut(s) | 442 |
| EarI | CTCTTC | 1 cut(s) | 442 |
| Eco130I | CCWWGG | 1 cut(s) | 523 |
| Eco47I | GGWCC | 2 cut(s) | 199, 312 |
| EcoO109I | RGGNCCY | 1 cut(s) | 199 |
| EcoT14I | CCWWGG | 1 cut(s) | 523 |
| ErhI | CCWWGG | 1 cut(s) | 523 |
| FaeI | CATG | 2 cut(s) | 153, 527 |
| FaqI | GGGAC | 1 cut(s) | 212 |
| FatI | CATG | 2 cut(s) | 149, 523 |
| FauNDI | CATATG | 1 cut(s) | 506 |
| Fnu4HI | GCNGC | 1 cut(s) | 455 |
| FokI | GGATG | 1 cut(s) | 48 |
| Fsp4HI | GCNGC | 1 cut(s) | 455 |
| GluI | GCNGC | 1 cut(s) | 455 |
| GsuI | CTGGAG | 1 cut(s) | 254 |
| HaeIII | GGCC | 4 cut(s) | 60, 124, 229, 421 |
| HapII | CCGG | 1 cut(s) | 121 |
| Hin1II | CATG | 2 cut(s) | 153, 527 |
| HinfI | GANTC | 4 cut(s) | 97, 290, 381, 493 |
| HpaII | CCGG | 1 cut(s) | 121 |
| HphI | GGTGA | 1 cut(s) | 452 |
| Hpy188III | TCNNGA | 3 cut(s) | 134, 233, 441 |
| HpyAV | CCTTC | 2 cut(s) | 54, 213 |
| HpyCH4III | ACNGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 2 cut(s) | 210, 479 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 476 |
| HpyF3I | CTNAG | 1 cut(s) | 377 |
| Hsp92II | CATG | 2 cut(s) | 153, 527 |
| KflI | GGGWCCC | 1 cut(s) | 199 |
| Kzo9I | GATC | 3 cut(s) | 168, 276, 432 |
| LmnI | GCTCC | 1 cut(s) | 501 |
| LpnPI | CCDG | 5 cut(s) | 62, 134, 218, 220, 525 |
| Lsp1109I | GCAGC | 1 cut(s) | 441 |
| MalI | GATC | 3 cut(s) | 170, 278, 434 |
| MboI | GATC | 3 cut(s) | 168, 276, 432 |
| MboII | GAAGA | 2 cut(s) | 397, 429 |
| MflI | RGATCY | 2 cut(s) | 276, 432 |
| MlsI | TGGCCA | 2 cut(s) | 60, 421 |
| MluCI | AATT | 3 cut(s) | 91, 192, 464 |
| MluNI | TGGCCA | 2 cut(s) | 60, 421 |
| MlyI | GAGTC | 1 cut(s) | 299 |
| MmeI | TCCRAC | 2 cut(s) | 345, 410 |
| MnlI | CCTC | 9 cut(s) | 70, 121, 135, 240, 325, 328, 383, 468, 541 |
| Mox20I | TGGCCA | 2 cut(s) | 60, 421 |
| MscI | TGGCCA | 2 cut(s) | 60, 421 |
| Msp20I | TGGCCA | 2 cut(s) | 60, 421 |
| MspI | CCGG | 1 cut(s) | 121 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 476 |
| NcoI | CCATGG | 1 cut(s) | 523 |
| NdeI | CATATG | 1 cut(s) | 506 |
| NdeII | GATC | 3 cut(s) | 168, 276, 432 |
| NlaIII | CATG | 2 cut(s) | 153, 527 |
| NlaIV | GGNNCC | 4 cut(s) | 42, 200, 201, 278 |
| NspV | TTCGAA | 1 cut(s) | 384 |
| PfeI | GAWTC | 3 cut(s) | 97, 381, 493 |
| PkrI | GCNGC | 1 cut(s) | 456 |
| PleI | GAGTC | 1 cut(s) | 298 |
| PpsI | GAGTC | 1 cut(s) | 298 |
| PpuMI | RGGWCCY | 1 cut(s) | 199 |
| Psp5II | RGGWCCY | 1 cut(s) | 199 |
| PspN4I | GGNNCC | 4 cut(s) | 42, 200, 201, 278 |
| PspPI | GGNCC | 2 cut(s) | 199, 312 |
| PspPPI | RGGWCCY | 1 cut(s) | 199 |
| PsuI | RGATCY | 2 cut(s) | 276, 432 |
| SatI | GCNGC | 1 cut(s) | 455 |
| Sau3AI | GATC | 3 cut(s) | 168, 276, 432 |
| Sau96I | GGNCC | 2 cut(s) | 199, 312 |
| SchI | GAGTC | 1 cut(s) | 299 |
| SetI | ASST | 4 cut(s) | 23, 417, 430, 569 |
| SfuI | TTCGAA | 1 cut(s) | 384 |
| SinI | GGWCC | 2 cut(s) | 199, 312 |
| SmlI | CTYRAG | 1 cut(s) | 132 |
| SmoI | CTYRAG | 1 cut(s) | 132 |
| Sse9I | AATT | 3 cut(s) | 91, 192, 464 |
| SsiI | CCGC | 1 cut(s) | 310 |
| StyI | CCWWGG | 1 cut(s) | 523 |
| TaaI | ACNGT | 1 cut(s) | 162 |
| TaqI | TCGA | 1 cut(s) | 384 |
| TasI | AATT | 3 cut(s) | 91, 192, 464 |
| TfiI | GAWTC | 3 cut(s) | 97, 381, 493 |
| TscAI | CASTG | 1 cut(s) | 167 |
| TseI | GCWGC | 1 cut(s) | 454 |
| TspDTI | ATGAA | 4 cut(s) | 138, 347, 397, 506 |
| TspRI | CASTG | 1 cut(s) | 167 |
| VpaK11BI | GGWCC | 2 cut(s) | 199, 312 |