Rorug07G0183100

Remorin, C-terminal region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000194
Physical Location & Seq
Forward (+)
15271844 .. 15275330
3487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0183100.1

Sequence Viewer

Length: 1947 bp
ATGAAAATGCAAAGGAAAGCTAAAACCCGAAAGCCATCAGTAAACTGTAAAACTCCCCATCAATTAATCCCACCAAAAAATCCCAACGACTGGTTCCAAATCCTCGCCTCAAACCATGGAAGAAACGGCGCCCATATCAAATTAAATCTCAAAACAAAACAAAACAAAAATCTCAATACCCTCCAAACATTTCGCTGCTCTCACACTCACTCGCCCCAAAGCCTTGGCCTTTCCTCCCTTCGCTTTCTTCTTCTCCTCCTCCATCATCATCGTACTCTCCGACGACCCGAAACCCCACCTCGACCCGGCCCGGATGTCTCCAATATGACCCGGACCCGAGACGAAGACCGGCGACCCACCAGCACCAGCAGCAGCAGCGGCGGCGGAGGAGGCGCCGCCATGAGAGTTATAGTCCCTCTACAAGGCGTGGTTCAAGGCAGAGGAGGACTCGTTCTCGGCTCCGTCATACCATGCGCGCTCTTCTATTTCCTCCAGCTCTATCTCAAACGACACCGTTCCAACTCCAACCCGCCGACTCCGCCGCCTTCTCCGGACCCGGACTCGGACCACCACCACCCGGCCGGGCAGTTGGTGGAAGCTCCGGTTCTGCCCCGGTCGCTGTCGAGGTCCCATCTCTCGCCGAGGAACCCGGGTCCGGTACACGTCTCGGGTCGGGCCAATTCGGTTTTGAAAGGCGGTGAGCCGCCGTATTATGTCGGGTTGAGGAAGGTGGCGGAGGATCCGTACGACGAGGTGGGTAACCCGGATGGGGTTATTCAGCTGGGTTTGGATGAAAACAAGTTAGCTTTGGACTTGGTTCGAGATTGGCTCATGGAGAATGCAAAGGATGCAATACTGGGTGGTGAGGAGCTTGGGATTAGTGGGATTGCTTGTTACCAGCCTTCTGATGGTTTAATGGAGCTGAAACTGGCTGTGGCAGGATTCATGTCTAAGGCCACTGGAAATTCAGTTACGTACAACCCCTCACAAATTGTATTGACAGCTGGTGCAACCCCTGCAATTGAGATTCTAAGCTTCTGCCTAGCAGACAGTGGAAATGCATTTCTCGTTCCGGCACCATATTACCCTGGTTTGGACAGAGATGTGAAGTGGCGAACTGGAGTGGAGATAATACCTGTTCCATGCCGCAGTGCTGACAAATTCAATTTAAGTATAACTGCACTTGATCGAGCATTCAACCAGGCAAAGAAACGTGGTGTAAAAGTTCGTGGGATTATAATTTCAAATCCTTCAAATCCTGGTGGCAGTTTACTTACTCGTGAATCACTTTACAACCTTCTGGACTTTGCCCGAGAGAAGAACATTCATATAATCTCAAATGAATTGTTTGCTGGATCCACGTATGGAAGTGAAGAGTTTGTTAGCATGGCAGAAATCGTTGATTTGGAAGATCTCGACCAGAACAGAGTGCATATAGTATATGGCATATCAAAAGATCTCTCACTTCCAGGTTTCAGGGTGGGTGCCATCTACTCCTTTAACAAGAATGTCTTGACTGCTGCTAAAAAGTTGACAAGGTTCTCTTCTATCTCCGCCCCATCCCAACGGTTGCTTATCTCTATGCTTTCAGACACCAAATTTATGCACAAGTTAATCGAGATTAACAGAGAAAGGCTCCGTGGAATGTATCTTAGATTTGTGACAGGATTGAAGCAATTGGGCATTGAGTGCACAAAGAGTAATGGGGGTTTCTACTGTTGGGCAGACTTGAGTGGGTTAATTCGCTCTTACAGTGAGAAAGGGGAGCTTGAGCTCTGGGATAGGTTGTTGAATGTAGGTAAGCTCAATGTTACTCCTGGATCTTCTTGTCATTGTATTGAACCGGGATGGTTCCGGTTTTGTTTTACGACGTTGACTGAAAAAGATATTCCTGTTGTTATGGAACGAATTCGGAATATTGCCGAAACATGTAAATCACACAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Remorin_C

Protein Analysis

648

Amino Acids

71.48

Weight (kDa)

9.4

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 259 - 637 2.9e-80 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1238
AccB1I GGYRCC 4 cut(s) 128, 392, 1075, 1484
AccB7I CCANNNNNTGG 1 cut(s) 90
AccII CGCG 1 cut(s) 476
AccIII TCCGGA 1 cut(s) 550
AclWI GGATC 5 cut(s) 734, 747, 1350, 1363, 1828
AcoI YGGCCR 1 cut(s) 579
AcsI RAATTY 4 cut(s) 964, 1160, 1598, 1908
AcyI GRCGYC 2 cut(s) 129, 393
AfaI GTAC 4 cut(s) 274, 660, 746, 977
AfiI CCNNNNNNNGG 9 cut(s) 90, 305, 422, 562, 577, 655, 769, 908, 1093
AflIII ACRYGT 2 cut(s) 661, 1928
AgsI TTSAA 9 cut(s) 434, 691, 1165, 1198, 1245, 1254, 1672, 1792, 1841
AjiI CACGTC 1 cut(s) 664
AjnI CCWGG 5 cut(s) 1087, 1200, 1258, 1468, 1816
AjuI GAANNNNNNNTTGG 2 cut(s) 77, 109
AloI GAACNNNNNNTCC 2 cut(s) 435, 467
Alw21I GWGCWC 2 cut(s) 1694, 1776
Alw26I GTCTC 3 cut(s) 322, 333, 670
Alw44I GTGCAC 1 cut(s) 1690
AlwI GGATC 5 cut(s) 734, 747, 1350, 1363, 1828
Ama87I CYCGRG 4 cut(s) 336, 649, 667, 1311
Aor13HI TCCGGA 1 cut(s) 550
AoxI GGCC 5 cut(s) 226, 307, 579, 675, 954
ApaLI GTGCAC 1 cut(s) 1690
ApeKI GCWGC 5 cut(s) 195, 369, 372, 375, 1520
ApoI RAATTY 4 cut(s) 964, 1160, 1598, 1908
AseI ATTAAT 1 cut(s) 65
Asp700I GAANNNNTTC 1 cut(s) 1908
AspLEI GCGC 4 cut(s) 131, 395, 476, 478
AspS9I GGNCC 7 cut(s) 308, 333, 553, 565, 627, 653, 675
AsuHPI GGTGA 2 cut(s) 710, 875
AvaI CYCGRG 4 cut(s) 336, 649, 667, 1311
AvaII GGWCC 5 cut(s) 333, 553, 565, 627, 653
BaeGI GKGCMC 1 cut(s) 1694
BamHI GGATCC 2 cut(s) 739, 1355
BanI GGYRCC 4 cut(s) 128, 392, 1075, 1484
BanII GRGCYC 1 cut(s) 1776
BauI CACGAG 1 cut(s) 1278
BbsI GAAGAC 1 cut(s) 351
Bbv12I GWGCWC 2 cut(s) 1694, 1776
BbvI GCAGC 5 cut(s) 182, 381, 384, 387, 1507
BccI CCATC 9 cut(s) 43, 66, 270, 639, 761, 902, 1496, 1567, 1842
BceAI ACGGC 2 cut(s) 142, 691
BciT130I CCWGG 5 cut(s) 1089, 1202, 1260, 1470, 1818
BcoDI GTCTC 3 cut(s) 322, 333, 670
BfaI CTAG 1 cut(s) 1043
BfoI RGCGCY 2 cut(s) 132, 396
BglII AGATCT 2 cut(s) 1411, 1456
Bme18I GGWCC 5 cut(s) 333, 553, 565, 627, 653
BmeT110I CYCGRG 4 cut(s) 336, 649, 667, 1311
BmgBI CACGTC 1 cut(s) 664
BmgT120I GGNCC 7 cut(s) 308, 333, 553, 565, 627, 653, 675
BmrI ACTGGG 1 cut(s) 866
BmsI GCATC 1 cut(s) 838
BmuI ACTGGG 1 cut(s) 866
BpiI GAAGAC 1 cut(s) 351
BplI GAGNNNNNCTC 6 cut(s) 432, 464, 813, 845, 1620, 1652
BpmI CTGGAG 2 cut(s) 476, 1140
BpuEI CTTGAG 2 cut(s) 1750, 1790
BsaAI YACGTR 2 cut(s) 975, 1362
BsaHI GRCGYC 2 cut(s) 129, 393
BsaJI CCNNGG 7 cut(s) 115, 223, 611, 641, 649, 1087, 1639
BsaWI WCCGGW 4 cut(s) 550, 601, 655, 1854
BsaXI ACNNNNNCTCC 4 cut(s) 435, 465, 728, 758
Bsc4I CCNNNNNNNGG 9 cut(s) 90, 305, 422, 562, 577, 655, 769, 908, 1093
Bse118I RCCGGY 1 cut(s) 348
Bse1I ACTGG 5 cut(s) 95, 861, 933, 964, 1123
BseAI TCCGGA 1 cut(s) 550
BseBI CCWGG 5 cut(s) 1089, 1202, 1260, 1470, 1818
BseDI CCNNGG 7 cut(s) 115, 223, 611, 641, 649, 1087, 1639
BseGI GGATG 6 cut(s) 319, 772, 796, 853, 1559, 1853
BseLI CCNNNNNNNGG 9 cut(s) 90, 305, 422, 562, 577, 655, 769, 908, 1093
BseNI ACTGG 5 cut(s) 95, 861, 933, 964, 1123
BsePI GCGCGC 1 cut(s) 474
BseRI GAGGAG 5 cut(s) 245, 248, 402, 456, 881
BseSI GKGCMC 1 cut(s) 1694
BseX3I CGGCCG 1 cut(s) 579
BseXI GCAGC 5 cut(s) 182, 381, 384, 387, 1507
BseYI CCCAGC 1 cut(s) 781
BsgI GTGCAG 1 cut(s) 1164
Bsh1236I CGCG 1 cut(s) 476
Bsh1285I CGRYCG 2 cut(s) 582, 617
BshFI GGCC 5 cut(s) 228, 309, 581, 677, 956
BshNI GGYRCC 4 cut(s) 128, 392, 1075, 1484
BsiEI CGRYCG 2 cut(s) 582, 617
BsiHKAI GWGCWC 2 cut(s) 1694, 1776
BsiHKCI CYCGRG 4 cut(s) 336, 649, 667, 1311
BsiWI CGTACG 1 cut(s) 744
BslFI GGGAC 2 cut(s) 398, 613
BslI CCNNNNNNNGG 9 cut(s) 90, 305, 422, 562, 577, 655, 769, 908, 1093
BsmAI GTCTC 3 cut(s) 322, 333, 670
BsmBI CGTCTC 2 cut(s) 333, 670
BsmFI GGGAC 2 cut(s) 398, 613
BsmI GAATGC 2 cut(s) 844, 1193
BsnI GGCC 5 cut(s) 228, 309, 581, 677, 956
BsoBI CYCGRG 4 cut(s) 336, 649, 667, 1311
Bsp1286I GDGCHC 2 cut(s) 1694, 1776
Bsp13I TCCGGA 1 cut(s) 550
Bsp143I GATC 6 cut(s) 739, 1186, 1355, 1411, 1456, 1820
Bsp19I CCATGG 1 cut(s) 115
BspANI GGCC 5 cut(s) 228, 309, 581, 677, 956
BspEI TCCGGA 1 cut(s) 550
BspFNI CGCG 1 cut(s) 476
BspPI GGATC 5 cut(s) 734, 747, 1350, 1363, 1828
BspQI GCTCTTC 1 cut(s) 485
BspT107I GGYRCC 4 cut(s) 128, 392, 1075, 1484
BsrFI RCCGGY 1 cut(s) 348
BsrI ACTGG 5 cut(s) 95, 861, 933, 964, 1123
BssAI RCCGGY 1 cut(s) 348
BssECI CCNNGG 7 cut(s) 115, 223, 611, 641, 649, 1087, 1639
BssHII GCGCGC 1 cut(s) 474
BssMI GATC 6 cut(s) 739, 1186, 1355, 1411, 1456, 1820
BssNI GRCGYC 2 cut(s) 129, 393
BssSI CACGAG 1 cut(s) 1278
BssT1I CCWWGG 2 cut(s) 115, 223
Bst2BI CACGAG 1 cut(s) 1278
Bst2UI CCWGG 5 cut(s) 1089, 1202, 1260, 1470, 1818
Bst4CI ACNGT 7 cut(s) 47, 515, 1052, 1569, 1718, 1754, 1943
Bst6I CTCTTC 3 cut(s) 485, 1368, 1549
BstACI GRCGYC 2 cut(s) 129, 393
BstAPI GCANNNNNTGC 3 cut(s) 848, 1016, 1689
BstBAI YACGTR 2 cut(s) 975, 1362
BstC8I GCNNGC 1 cut(s) 476
BstDEI CTNAG 3 cut(s) 951, 1031, 1652
BstDSI CCRYGG 2 cut(s) 115, 1639
BstEII GGTNACC 1 cut(s) 758
BstENI CCTNNNNNAGG 1 cut(s) 420
BstF5I GGATG 6 cut(s) 319, 772, 796, 853, 1559, 1853
BstFNI CGCG 1 cut(s) 476
BstH2I RGCGCY 2 cut(s) 132, 396
BstHHI GCGC 4 cut(s) 131, 395, 476, 478
BstKTI GATC 6 cut(s) 742, 1189, 1358, 1414, 1459, 1823
BstMAI GTCTC 3 cut(s) 322, 333, 670
BstMBI GATC 6 cut(s) 739, 1186, 1355, 1411, 1456, 1820
BstMCI CGRYCG 2 cut(s) 582, 617
BstNI CCWGG 5 cut(s) 1089, 1202, 1260, 1470, 1818
BstNSI RCATGY 1 cut(s) 1932
BstPI GGTNACC 1 cut(s) 758
BstSLI GKGCMC 1 cut(s) 1694
BstSNI TACGTA 1 cut(s) 975
BstUI CGCG 1 cut(s) 476
BstV1I GCAGC 5 cut(s) 182, 381, 384, 387, 1507
BstV2I GAAGAC 1 cut(s) 351
BstX2I RGATCY 5 cut(s) 739, 1355, 1411, 1456, 1820
BstXI CCANNNNNNTGG 1 cut(s) 224
BstYI RGATCY 5 cut(s) 739, 1355, 1411, 1456, 1820
BstZI CGGCCG 1 cut(s) 579
BsuRI GGCC 5 cut(s) 228, 309, 581, 677, 956
BtgI CCRYGG 2 cut(s) 115, 1639
BtrI CACGTC 1 cut(s) 664
BtsCI GGATG 6 cut(s) 319, 772, 796, 853, 1559, 1853
BtsI GCAGTG 1 cut(s) 1156
BtsIMutI CAGTG 4 cut(s) 957, 1057, 1156, 1759
Cac8I GCNNGC 1 cut(s) 476
CfoI GCGC 4 cut(s) 131, 395, 476, 478
Cfr10I RCCGGY 1 cut(s) 348
Cfr13I GGNCC 7 cut(s) 308, 333, 553, 565, 627, 653, 675
Cfr9I CCCGGG 1 cut(s) 649
Csp6I GTAC 4 cut(s) 273, 659, 745, 976
CviAII CATG 8 cut(s) 116, 400, 471, 832, 946, 1143, 1387, 1929
CviQI GTAC 4 cut(s) 273, 659, 745, 976
DdeI CTNAG 3 cut(s) 951, 1031, 1652
DinI GGCGCC 2 cut(s) 130, 394
DpnI GATC 6 cut(s) 741, 1188, 1357, 1413, 1458, 1822
DpnII GATC 6 cut(s) 739, 1186, 1355, 1411, 1456, 1820
EaeI YGGCCR 1 cut(s) 579
EagI CGGCCG 1 cut(s) 579
Eam1104I CTCTTC 3 cut(s) 485, 1368, 1549
EarI CTCTTC 3 cut(s) 485, 1368, 1549
EciI GGCGGA 4 cut(s) 399, 528, 749, 1543
Ecl136II GAGCTC 1 cut(s) 1774
EclXI CGGCCG 1 cut(s) 579
Eco105I TACGTA 1 cut(s) 975
Eco130I CCWWGG 2 cut(s) 115, 223
Eco24I GRGCYC 1 cut(s) 1776
Eco47I GGWCC 5 cut(s) 333, 553, 565, 627, 653
Eco52I CGGCCG 1 cut(s) 579
Eco53kI GAGCTC 1 cut(s) 1774
Eco88I CYCGRG 4 cut(s) 336, 649, 667, 1311
Eco91I GGTNACC 1 cut(s) 758
EcoICRI GAGCTC 1 cut(s) 1774
EcoNI CCTNNNNNAGG 1 cut(s) 420
EcoO109I RGGNCCY 1 cut(s) 627
EcoO65I GGTNACC 1 cut(s) 758
EcoRI GAATTC 1 cut(s) 1908
EcoRII CCWGG 5 cut(s) 1087, 1200, 1258, 1468, 1816
EcoT14I CCWWGG 2 cut(s) 115, 223
EcoT22I ATGCAT 1 cut(s) 1063
EcoT38I GRGCYC 1 cut(s) 1776
EgeI GGCGCC 2 cut(s) 130, 394
EheI GGCGCC 2 cut(s) 130, 394
ErhI CCWWGG 2 cut(s) 115, 223
Esp3I CGTCTC 2 cut(s) 333, 670
FaeI CATG 8 cut(s) 119, 403, 474, 835, 949, 1146, 1390, 1932
FalI AAGNNNNNCTT 6 cut(s) 1496, 1528, 1528, 1560, 1752, 1784
FaqI GGGAC 2 cut(s) 398, 613
FatI CATG 8 cut(s) 115, 399, 470, 831, 945, 1142, 1386, 1928
FauI CCCGC 1 cut(s) 537
FokI GGATG 6 cut(s) 326, 779, 803, 860, 1546, 1860
FriOI GRGCYC 1 cut(s) 1776
FspBI CTAG 1 cut(s) 1043
GlaI GCGC 4 cut(s) 130, 394, 475, 477
GsaI CCCAGC 1 cut(s) 785
GsuI CTGGAG 2 cut(s) 476, 1140
HaeII RGCGCY 2 cut(s) 132, 396
HaeIII GGCC 5 cut(s) 228, 309, 581, 677, 956
HhaI GCGC 4 cut(s) 131, 395, 476, 478
Hin1I GRCGYC 2 cut(s) 129, 393
Hin1II CATG 8 cut(s) 119, 403, 474, 835, 949, 1146, 1390, 1932
Hin6I GCGC 4 cut(s) 129, 393, 474, 476
HinP1I GCGC 4 cut(s) 129, 393, 474, 476
HincII GTYRAC 2 cut(s) 1533, 1875
HindII GTYRAC 2 cut(s) 1533, 1875
HindIII AAGCTT 1 cut(s) 1033
HinfI GANTC 6 cut(s) 447, 535, 560, 942, 1027, 1283
HphI GGTGA 2 cut(s) 710, 875
Hpy166II GTNNAC 6 cut(s) 43, 661, 1271, 1533, 1692, 1875
Hpy188I TCNGA 5 cut(s) 281, 565, 907, 1591, 1914
Hpy188III TCNNGA 7 cut(s) 551, 821, 1280, 1301, 1415, 1513, 1618
Hpy8I GTNNAC 6 cut(s) 43, 661, 1271, 1533, 1692, 1875
Hpy99I CGWCG 3 cut(s) 285, 752, 1873
HpyAV CCTTC 6 cut(s) 248, 555, 721, 912, 1260, 1307
HpyCH4III ACNGT 7 cut(s) 47, 515, 1052, 1569, 1718, 1754, 1943
HpyCH4IV ACGT 5 cut(s) 663, 974, 1213, 1361, 1871
HpyF3I CTNAG 3 cut(s) 951, 1031, 1652
HpySE526I ACGT 5 cut(s) 663, 974, 1213, 1361, 1871
Hsp92I GRCGYC 2 cut(s) 129, 393
Hsp92II CATG 8 cut(s) 119, 403, 474, 835, 949, 1146, 1390, 1932
HspAI GCGC 4 cut(s) 129, 393, 474, 476
KasI GGCGCC 2 cut(s) 128, 392
Kpn2I TCCGGA 1 cut(s) 550
Kzo9I GATC 6 cut(s) 739, 1186, 1355, 1411, 1456, 1820
LguI GCTCTTC 1 cut(s) 485
LmnI GCTCC 6 cut(s) 464, 604, 868, 919, 1641, 1765
Lsp1109I GCAGC 5 cut(s) 182, 381, 384, 387, 1507
LweI GCATC 1 cut(s) 838
MaeI CTAG 1 cut(s) 1043
MaeII ACGT 5 cut(s) 663, 974, 1213, 1361, 1871
MaeIII GTNAC 5 cut(s) 758, 893, 970, 1660, 1810
MalI GATC 6 cut(s) 741, 1188, 1357, 1413, 1458, 1822
MboI GATC 6 cut(s) 739, 1186, 1355, 1411, 1456, 1820
MfeI CAATTG 2 cut(s) 1020, 1676
MflI RGATCY 5 cut(s) 739, 1355, 1411, 1456, 1820
MhlI GDGCHC 2 cut(s) 1694, 1776
Mly113I GGCGCC 2 cut(s) 129, 393
MlyI GAGTC 3 cut(s) 441, 529, 554
MmeI TCCRAC 3 cut(s) 304, 543, 549
Mph1103I ATGCAT 1 cut(s) 1063
MroI TCCGGA 1 cut(s) 550
MroXI GAANNNNTTC 1 cut(s) 1908
MseI TTAA 8 cut(s) 65, 143, 914, 1169, 1500, 1613, 1623, 1739
MspA1I CMGCKG 3 cut(s) 378, 781, 1004
MunI CAATTG 2 cut(s) 1020, 1676
Mva1269I GAATGC 2 cut(s) 844, 1193
MvaI CCWGG 5 cut(s) 1089, 1202, 1260, 1470, 1818
MvnI CGCG 1 cut(s) 476
NarI GGCGCC 2 cut(s) 129, 393
NcoI CCATGG 1 cut(s) 115
NdeII GATC 6 cut(s) 739, 1186, 1355, 1411, 1456, 1820
NlaIII CATG 8 cut(s) 119, 403, 474, 835, 949, 1146, 1390, 1932
NmeAIII GCCGAG 2 cut(s) 435, 666
NmuCI GTSAC 1 cut(s) 1660
NsiI ATGCAT 1 cut(s) 1063
NspI RCATGY 1 cut(s) 1932
PauI GCGCGC 1 cut(s) 474
PciI ACATGT 1 cut(s) 1928
PciSI GCTCTTC 1 cut(s) 485
PcsI WCGNNNNNNNCGW 1 cut(s) 277
PctI GAATGC 2 cut(s) 844, 1193
PdmI GAANNNNTTC 1 cut(s) 1908
PfeI GAWTC 3 cut(s) 942, 1027, 1283
Pfl23II CGTACG 1 cut(s) 744
PflMI CCANNNNNTGG 1 cut(s) 90
PfoI TCCNGGA 1 cut(s) 1816
PleI GAGTC 3 cut(s) 441, 529, 554
PluTI GGCGCC 2 cut(s) 132, 396
PpsI GAGTC 3 cut(s) 441, 529, 554
Ppu21I YACGTR 2 cut(s) 975, 1362
PpuMI RGGWCCY 1 cut(s) 627
PscI ACATGT 1 cut(s) 1928
PshBI ATTAAT 1 cut(s) 65
PsiI TTATAA 1 cut(s) 1238
Psp124BI GAGCTC 1 cut(s) 1776
Psp5II RGGWCCY 1 cut(s) 627
Psp6I CCWGG 5 cut(s) 1087, 1200, 1258, 1468, 1816
PspEI GGTNACC 1 cut(s) 758
PspFI CCCAGC 1 cut(s) 781
PspGI CCWGG 5 cut(s) 1087, 1200, 1258, 1468, 1816
PspLI CGTACG 1 cut(s) 744
PspPI GGNCC 7 cut(s) 308, 333, 553, 565, 627, 653, 675
PspPPI RGGWCCY 1 cut(s) 627
PsuI RGATCY 5 cut(s) 739, 1355, 1411, 1456, 1820
PteI GCGCGC 1 cut(s) 474
PvuII CAGCTG 2 cut(s) 781, 1004
RsaI GTAC 4 cut(s) 274, 660, 746, 977
RsaNI GTAC 4 cut(s) 273, 659, 745, 976
SacI GAGCTC 1 cut(s) 1776
SapI GCTCTTC 1 cut(s) 485
SaqAI TTAA 8 cut(s) 65, 143, 914, 1169, 1500, 1613, 1623, 1739
Sau3AI GATC 6 cut(s) 739, 1186, 1355, 1411, 1456, 1820
Sau96I GGNCC 7 cut(s) 308, 333, 553, 565, 627, 653, 675
SchI GAGTC 3 cut(s) 441, 529, 554
SduI GDGCHC 2 cut(s) 1694, 1776
SfaNI GCATC 1 cut(s) 838
SfoI GGCGCC 2 cut(s) 130, 394
SinI GGWCC 5 cut(s) 333, 553, 565, 627, 653
SmaI CCCGGG 1 cut(s) 651
SmlI CTYRAG 2 cut(s) 1729, 1769
SmoI CTYRAG 2 cut(s) 1729, 1769
SnaBI TACGTA 1 cut(s) 975
SspDI GGCGCC 2 cut(s) 128, 392
SspI AATATT 1 cut(s) 1918
SspMI CTAG 1 cut(s) 1043
SstI GAGCTC 1 cut(s) 1776
StyI CCWWGG 2 cut(s) 115, 223
TaaI ACNGT 7 cut(s) 47, 515, 1052, 1569, 1718, 1754, 1943
TaiI ACGT 5 cut(s) 666, 977, 1216, 1364, 1874
TaqI TCGA 6 cut(s) 301, 623, 820, 1189, 1416, 1617
TauI GCSGC 6 cut(s) 381, 384, 398, 544, 706, 1149
TfiI GAWTC 3 cut(s) 942, 1027, 1283
Tru1I TTAA 8 cut(s) 65, 143, 914, 1169, 1500, 1613, 1623, 1739
Tru9I TTAA 8 cut(s) 65, 143, 914, 1169, 1500, 1613, 1623, 1739
TscAI CASTG 4 cut(s) 964, 1057, 1156, 1759
TseFI GTSAC 1 cut(s) 1660
TseI GCWGC 5 cut(s) 195, 369, 372, 375, 1520
Tsp45I GTSAC 1 cut(s) 1660
TspDTI ATGAA 5 cut(s) 17, 807, 934, 1316, 1356
TspGWI ACGGA 3 cut(s) 451, 732, 1628
TspMI CCCGGG 1 cut(s) 649
TspRI CASTG 4 cut(s) 964, 1057, 1156, 1759
Van91I CCANNNNNTGG 1 cut(s) 90
VneI GTGCAC 1 cut(s) 1690
VpaK11BI GGWCC 5 cut(s) 333, 553, 565, 627, 653
VspI ATTAAT 1 cut(s) 65
XagI CCTNNNNNAGG 1 cut(s) 420
XapI RAATTY 4 cut(s) 964, 1160, 1598, 1908
XceI RCATGY 1 cut(s) 1932
XcmI CCANNNNNNNNNTGG 1 cut(s) 905
XmaI CCCGGG 1 cut(s) 649
XmnI GAANNNNTTC 1 cut(s) 1908
XspI CTAG 1 cut(s) 1043
Zsp2I ATGCAT 1 cut(s) 1063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.