FvH4_2g05763

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000194
Physical Location & Seq
Reverse (-)
4725465 .. 4727049
1585 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g05763.t1

Sequence Viewer

Length: 1497 bp
ATGGGCACACCCAAAGCTGATGGTGGCATGGGATTTAGGGACATCCATCACTTTAACCTTGCACTTCTTGCAAAGCAGTGTTGGAGGCTCATACAAAATCCTAATTCCTTATGGGCGAAATGTTTGAAAGGCCAATATTTTCCCAAGTGCAGTTTTATGGAGGCAAAGAAAGGGTATCGTGCCTCTTGGGGTTGGTCTAATTTAATTGAAGCAAGAGACTTTTTCATGGGAGAAGGCTGCTTTTGGCAAGTGTCTAATGGCAATGACATCAATATCTGGAAGGACAAATGGCTGCCCCCTCCTAATGCAGCTAAGGTGAGGGTTATTGGTGATATTTCGGCTAATGATCCTAGTTCGGTGGGCTCTTTTATTGATTGGGATTTGAGAGGGTGGAACACCACTGCTATTGATCATGTCATTCATCCACAAGACATACAGAGAATTGTTGACATTCCTATTGGTGATGGGGAGGTTCTGGACTGTTTTTTATGGCCTTGGAATAAAATCGGTGTGTACACAGTCAGAAGTGGCTATCATTGGTACCATACTTCTATGTCTATTCCTAGAGCTCCTAGCATCGGTTCCTCTCACCAGTTTGATCCCAAGATATGGAAGATTTTATGGAGCATCAAAACTCTTCCTAAAGTCAGAATTTTCTTATGGAGGGTACTACATGGGGCAGCTCCAACTATGCACAGCCTACACAAGAGAAAGATCGTTTCGAACCCTCTGTGTCCTGTGTGTGGAAAAACAGAAGAGACATTTGAACATCTCCTCCTTCTGTGTCACTGGGTTAACCCAATCTGGTTTGGGTCCCCACTTGGAATTAGAATTGATAAAAGGAAGATTACTACTTTTGATAGATGGCTTATTAGTATCTACAATCACTGCCCATCTAGTGAAAGGGAAGCTGTACTTACATTGATTAGTACTATCTGCTGGGCCATCTGGAAAGAGAGGTGTCATTTTGTCTATCAACATAGAGAGGTGTCTCCGCCTTTTACTATTAGAGCTGCCCGAAATCTTGCCTTGGAGTTCCGTCATGCCTCAGCGTCTATGCGGAATTCCCGAGTTCCGAGACTGCACATGCAATGGCTTCCTCCTCCCTTTGGTCACCACAAGATCAATTCGGATGCTTCTTGGTTCCCACCGGATCATACTGGAGTAGGAATTGTGATAAGAGACTCGAATCGGGTCATGATTGCTGGCTCTAGCCTTTTGAAGAAGTGTGGATCGGTTACAGATGCGAAAGCTGTTGCTTTACTTGTCGGTTCTGAATTGGTTGCCTCCCTGCAATTACAAAATATCATTTTCGAGTCGGACTTAGAAGAAGTCATTACAGAAATCAATAAGAATCACAACAAGAAGCGAATAGAGTGGCGCATGTTGCCGCATCGCTTGCCTTCAGAAGTGTGGATCCTTTGTGATGGGCTTACCAGCCACCACCTTCCCTCACTAATGTTCTTCGCAGTGATGGATTGCCCTGCCCTCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

499

Amino Acids

57.11

Weight (kDa)

9.18

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 200 - 269 6e-17 zinc-binding in reverse transcriptase
RVT_3 PF13456 377 - 459 2.5e-09 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 540
AccB1I GGYRCC 1 cut(s) 540
AccB7I CCANNNNNTGG 1 cut(s) 609
AciI CCGC 3 cut(s) 995, 1060, 1391
AclWI GGATC 6 cut(s) 341, 593, 1161, 1240, 1411, 1424
AcsI RAATTY 2 cut(s) 651, 1063
AcuI CTGAAG 1 cut(s) 1389
AfaI GTAC 5 cut(s) 515, 542, 669, 915, 931
AfiI CCNNNNNNNGG 4 cut(s) 578, 609, 743, 1109
AgsI TTSAA 4 cut(s) 127, 209, 767, 1222
AloI GAACNNNNNNTCC 2 cut(s) 759, 791
AluBI AGCT 7 cut(s) 17, 311, 569, 683, 911, 1013, 1253
AluI AGCT 7 cut(s) 17, 311, 569, 683, 911, 1013, 1253
Alw21I GWGCWC 1 cut(s) 571
Alw26I GTCTC 5 cut(s) 210, 752, 996, 1072, 1176
AlwI GGATC 6 cut(s) 341, 593, 1161, 1240, 1411, 1424
Ama87I CYCGRG 1 cut(s) 1068
AoxI GGCC 3 cut(s) 130, 491, 942
ApeKI GCWGC 5 cut(s) 237, 292, 308, 680, 1013
ApoI RAATTY 2 cut(s) 651, 1063
Asp718I GGTACC 1 cut(s) 540
AspLEI GCGC 1 cut(s) 1383
AspS9I GGNCC 2 cut(s) 813, 942
AsuHPI GGTGA 5 cut(s) 328, 341, 473, 581, 1106
AsuII TTCGAA 1 cut(s) 722
AvaI CYCGRG 1 cut(s) 1068
AvaII GGWCC 1 cut(s) 813
BaeGI GKGCMC 1 cut(s) 8
BamHI GGATCC 1 cut(s) 1416
BanI GGYRCC 1 cut(s) 540
BanII GRGCYC 2 cut(s) 365, 571
Bbv12I GWGCWC 1 cut(s) 571
BbvCI CCTCAGC 1 cut(s) 1048
BbvI GCAGC 5 cut(s) 224, 279, 320, 692, 1000
BccI CCATC 8 cut(s) 14, 54, 458, 858, 901, 953, 1421, 1468
BclI TGATCA 1 cut(s) 409
BcoDI GTCTC 5 cut(s) 210, 752, 996, 1072, 1176
BfaI CTAG 5 cut(s) 351, 564, 573, 897, 1212
BisI GCNGC 6 cut(s) 238, 293, 309, 681, 1014, 1391
BlsI GCNGC 6 cut(s) 239, 294, 310, 682, 1015, 1392
BmcAI AGTACT 1 cut(s) 931
Bme18I GGWCC 1 cut(s) 813
BmeT110I CYCGRG 1 cut(s) 1068
BmgT120I GGNCC 2 cut(s) 813, 942
BmiI GGNNCC 6 cut(s) 542, 583, 814, 815, 1145, 1418
BmrI ACTGGG 1 cut(s) 799
BmsI GCATC 5 cut(s) 585, 636, 1123, 1234, 1402
BmuI ACTGGG 1 cut(s) 799
BpmI CTGGAG 1 cut(s) 1182
Bpu10I CCTNAGC 2 cut(s) 312, 1048
Bpu14I TTCGAA 1 cut(s) 722
BsaJI CCNNGG 2 cut(s) 494, 1029
BsaWI WCCGGW 1 cut(s) 1150
BsaXI ACNNNNNCTCC 2 cut(s) 759, 789
Bsc4I CCNNNNNNNGG 4 cut(s) 578, 609, 743, 1109
Bse1I ACTGG 3 cut(s) 592, 794, 1165
Bse3DI GCAATG 2 cut(s) 268, 1097
BseDI CCNNGG 2 cut(s) 494, 1029
BseGI GGATG 3 cut(s) 42, 421, 1138
BseLI CCNNNNNNNGG 4 cut(s) 578, 609, 743, 1109
BseMI GCAATG 2 cut(s) 268, 1097
BseMII CTCAG 1 cut(s) 1062
BseNI ACTGG 3 cut(s) 592, 794, 1165
BseRI GAGGAG 2 cut(s) 764, 1092
BseSI GKGCMC 1 cut(s) 8
BseXI GCAGC 5 cut(s) 224, 279, 320, 692, 1000
BseYI CCCAGC 1 cut(s) 939
BsgI GTGCAG 2 cut(s) 169, 1067
BshFI GGCC 3 cut(s) 132, 493, 944
BshNI GGYRCC 1 cut(s) 540
BsiHKAI GWGCWC 1 cut(s) 571
BsiHKCI CYCGRG 1 cut(s) 1068
BsiSI CCGG 1 cut(s) 1151
BslFI GGGAC 2 cut(s) 53, 799
BslI CCNNNNNNNGG 4 cut(s) 578, 609, 743, 1109
BsmAI GTCTC 5 cut(s) 210, 752, 996, 1072, 1176
BsmFI GGGAC 2 cut(s) 53, 799
BsnI GGCC 3 cut(s) 132, 493, 944
BsoBI CYCGRG 1 cut(s) 1068
Bsp119I TTCGAA 1 cut(s) 722
Bsp1286I GDGCHC 3 cut(s) 8, 365, 571
Bsp1407I TGTACA 1 cut(s) 513
Bsp143I GATC 8 cut(s) 346, 409, 598, 714, 1122, 1153, 1232, 1416
BspACI CCGC 3 cut(s) 995, 1060, 1391
BspANI GGCC 3 cut(s) 132, 493, 944
BspCNI CTCAG 1 cut(s) 1061
BspHI TCATGA 1 cut(s) 1197
BspLI GGNNCC 6 cut(s) 542, 583, 814, 815, 1145, 1418
BspPI GGATC 6 cut(s) 341, 593, 1161, 1240, 1411, 1424
BspT104I TTCGAA 1 cut(s) 722
BspT107I GGYRCC 1 cut(s) 540
BsrDI GCAATG 2 cut(s) 268, 1097
BsrGI TGTACA 1 cut(s) 513
BsrI ACTGG 3 cut(s) 592, 794, 1165
BssECI CCNNGG 2 cut(s) 494, 1029
BssMI GATC 8 cut(s) 346, 409, 598, 714, 1122, 1153, 1232, 1416
BssT1I CCWWGG 2 cut(s) 494, 1029
Bst4CI ACNGT 2 cut(s) 482, 520
Bst6I CTCTTC 2 cut(s) 642, 750
BstAPI GCANNNNNTGC 2 cut(s) 68, 1399
BstAUI TGTACA 1 cut(s) 513
BstBI TTCGAA 1 cut(s) 722
BstC8I GCNNGC 2 cut(s) 1207, 1400
BstDEI CTNAG 3 cut(s) 312, 1048, 1324
BstEII GGTNACC 1 cut(s) 1112
BstF5I GGATG 3 cut(s) 42, 421, 1138
BstHHI GCGC 1 cut(s) 1383
BstKTI GATC 8 cut(s) 349, 412, 601, 717, 1125, 1156, 1235, 1419
BstMAI GTCTC 5 cut(s) 210, 752, 996, 1072, 1176
BstMBI GATC 8 cut(s) 346, 409, 598, 714, 1122, 1153, 1232, 1416
BstMWI GCNNNNNNNGC 3 cut(s) 68, 1387, 1399
BstNSI RCATGY 2 cut(s) 1090, 1387
BstPI GGTNACC 1 cut(s) 1112
BstSLI GKGCMC 1 cut(s) 8
BstV1I GCAGC 5 cut(s) 224, 279, 320, 692, 1000
BstX2I RGATCY 1 cut(s) 1416
BstYI RGATCY 1 cut(s) 1416
BsuRI GGCC 3 cut(s) 132, 493, 944
BtgZI GCGATG 1 cut(s) 1379
BtsCI GGATG 3 cut(s) 42, 421, 1138
BtsI GCAGTG 4 cut(s) 83, 399, 886, 1476
BtsIMutI CAGTG 5 cut(s) 83, 399, 787, 886, 1476
Cac8I GCNNGC 2 cut(s) 1207, 1400
CciI TCATGA 1 cut(s) 1197
CfoI GCGC 1 cut(s) 1383
Cfr13I GGNCC 2 cut(s) 813, 942
CseI GACGC 1 cut(s) 1041
Csp6I GTAC 5 cut(s) 514, 541, 668, 914, 930
CspCI CAANNNNNGTGG 2 cut(s) 388, 423
CviAII CATG 9 cut(s) 28, 226, 413, 674, 1043, 1087, 1198, 1384, 1492
CviQI GTAC 5 cut(s) 514, 541, 668, 914, 930
DdeI CTNAG 3 cut(s) 312, 1048, 1324
DpnI GATC 8 cut(s) 348, 411, 600, 716, 1124, 1155, 1234, 1418
DpnII GATC 8 cut(s) 346, 409, 598, 714, 1122, 1153, 1232, 1416
Eam1104I CTCTTC 2 cut(s) 642, 750
EarI CTCTTC 2 cut(s) 642, 750
EciI GGCGGA 1 cut(s) 984
Ecl136II GAGCTC 1 cut(s) 569
Eco130I CCWWGG 2 cut(s) 494, 1029
Eco24I GRGCYC 2 cut(s) 365, 571
Eco47I GGWCC 1 cut(s) 813
Eco53kI GAGCTC 1 cut(s) 569
Eco57I CTGAAG 1 cut(s) 1389
Eco88I CYCGRG 1 cut(s) 1068
Eco91I GGTNACC 1 cut(s) 1112
EcoICRI GAGCTC 1 cut(s) 569
EcoO109I RGGNCCY 1 cut(s) 813
EcoO65I GGTNACC 1 cut(s) 1112
EcoRI GAATTC 1 cut(s) 1063
EcoT14I CCWWGG 2 cut(s) 494, 1029
EcoT38I GRGCYC 2 cut(s) 365, 571
ErhI CCWWGG 2 cut(s) 494, 1029
FaeI CATG 9 cut(s) 31, 229, 416, 677, 1046, 1090, 1201, 1387, 1495
FalI AAGNNNNNCTT 2 cut(s) 900, 932
FaqI GGGAC 2 cut(s) 53, 799
FatI CATG 9 cut(s) 27, 225, 412, 673, 1042, 1086, 1197, 1383, 1491
FbaI TGATCA 1 cut(s) 409
Fnu4HI GCNGC 6 cut(s) 238, 293, 309, 681, 1014, 1391
FokI GGATG 3 cut(s) 29, 408, 1145
FriOI GRGCYC 2 cut(s) 365, 571
Fsp4HI GCNGC 6 cut(s) 238, 293, 309, 681, 1014, 1391
FspBI CTAG 5 cut(s) 351, 564, 573, 897, 1212
GlaI GCGC 1 cut(s) 1382
GluI GCNGC 6 cut(s) 238, 293, 309, 681, 1014, 1391
GsaI CCCAGC 1 cut(s) 943
GsuI CTGGAG 1 cut(s) 1182
HaeIII GGCC 3 cut(s) 132, 493, 944
HapII CCGG 1 cut(s) 1151
HgaI GACGC 1 cut(s) 1041
HhaI GCGC 1 cut(s) 1383
Hin1II CATG 9 cut(s) 31, 229, 416, 677, 1046, 1090, 1201, 1387, 1495
Hin6I GCGC 1 cut(s) 1381
HinP1I GCGC 1 cut(s) 1381
HincII GTYRAC 2 cut(s) 448, 796
HindII GTYRAC 2 cut(s) 448, 796
HinfI GANTC 4 cut(s) 1184, 1189, 1316, 1354
HpaI GTTAAC 1 cut(s) 796
HpaII CCGG 1 cut(s) 1151
HphI GGTGA 5 cut(s) 328, 341, 473, 581, 1106
Hpy166II GTNNAC 4 cut(s) 448, 514, 516, 796
Hpy188I TCNGA 7 cut(s) 524, 650, 1077, 1132, 1276, 1321, 1408
Hpy188III TCNNGA 5 cut(s) 277, 476, 949, 1068, 1198
Hpy8I GTNNAC 4 cut(s) 448, 514, 516, 796
HpyAV CCTTC 5 cut(s) 227, 274, 788, 1413, 1457
HpyCH4III ACNGT 2 cut(s) 482, 520
HpyCH4V TGCA 8 cut(s) 62, 71, 150, 308, 694, 1084, 1090, 1294
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 1387, 1399
HpyF3I CTNAG 3 cut(s) 312, 1048, 1324
Hsp92II CATG 9 cut(s) 31, 229, 416, 677, 1046, 1090, 1201, 1387, 1495
HspAI GCGC 1 cut(s) 1381
KflI GGGWCCC 1 cut(s) 813
KpnI GGTACC 1 cut(s) 544
Ksp22I TGATCA 1 cut(s) 409
KspAI GTTAAC 1 cut(s) 796
Kzo9I GATC 8 cut(s) 346, 409, 598, 714, 1122, 1153, 1232, 1416
LmnI GCTCC 3 cut(s) 574, 624, 688
Lsp1109I GCAGC 5 cut(s) 224, 279, 320, 692, 1000
LweI GCATC 5 cut(s) 585, 636, 1123, 1234, 1402
MaeI CTAG 5 cut(s) 351, 564, 573, 897, 1212
MaeIII GTNAC 3 cut(s) 785, 1112, 1237
MalI GATC 8 cut(s) 348, 411, 600, 716, 1124, 1155, 1234, 1418
MboI GATC 8 cut(s) 346, 409, 598, 714, 1122, 1153, 1232, 1416
MboII GAAGA 7 cut(s) 625, 629, 767, 856, 1234, 1340, 1456
MflI RGATCY 1 cut(s) 1416
MhlI GDGCHC 3 cut(s) 8, 365, 571
MlyI GAGTC 2 cut(s) 1178, 1325
MmeI TCCRAC 3 cut(s) 62, 710, 1299
MseI TTAA 3 cut(s) 54, 203, 795
MspI CCGG 1 cut(s) 1151
MwoI GCNNNNNNNGC 3 cut(s) 68, 1387, 1399
NdeII GATC 8 cut(s) 346, 409, 598, 714, 1122, 1153, 1232, 1416
NlaIII CATG 9 cut(s) 31, 229, 416, 677, 1046, 1090, 1201, 1387, 1495
NlaIV GGNNCC 6 cut(s) 542, 583, 814, 815, 1145, 1418
NmuCI GTSAC 2 cut(s) 785, 1112
NspI RCATGY 2 cut(s) 1090, 1387
NspV TTCGAA 1 cut(s) 722
PagI TCATGA 1 cut(s) 1197
PfeI GAWTC 2 cut(s) 1189, 1354
PflMI CCANNNNNTGG 1 cut(s) 609
PkrI GCNGC 6 cut(s) 239, 294, 310, 682, 1015, 1392
PleI GAGTC 2 cut(s) 1178, 1324
PpsI GAGTC 2 cut(s) 1178, 1324
PpuMI RGGWCCY 1 cut(s) 813
Psp124BI GAGCTC 1 cut(s) 571
Psp5II RGGWCCY 1 cut(s) 813
PspEI GGTNACC 1 cut(s) 1112
PspFI CCCAGC 1 cut(s) 939
PspN4I GGNNCC 6 cut(s) 542, 583, 814, 815, 1145, 1418
PspPI GGNCC 2 cut(s) 813, 942
PspPPI RGGWCCY 1 cut(s) 813
PsuI RGATCY 1 cut(s) 1416
RsaI GTAC 5 cut(s) 515, 542, 669, 915, 931
RsaNI GTAC 5 cut(s) 514, 541, 668, 914, 930
SacI GAGCTC 1 cut(s) 571
SaqAI TTAA 3 cut(s) 54, 203, 795
SatI GCNGC 6 cut(s) 238, 293, 309, 681, 1014, 1391
Sau3AI GATC 8 cut(s) 346, 409, 598, 714, 1122, 1153, 1232, 1416
Sau96I GGNCC 2 cut(s) 813, 942
ScaI AGTACT 1 cut(s) 931
SchI GAGTC 2 cut(s) 1178, 1325
SduI GDGCHC 3 cut(s) 8, 365, 571
SfaNI GCATC 5 cut(s) 585, 636, 1123, 1234, 1402
SfuI TTCGAA 1 cut(s) 722
SinI GGWCC 1 cut(s) 813
SsiI CCGC 3 cut(s) 995, 1060, 1391
SspI AATATT 1 cut(s) 137
SspMI CTAG 5 cut(s) 351, 564, 573, 897, 1212
SstI GAGCTC 1 cut(s) 571
StyI CCWWGG 2 cut(s) 494, 1029
TaaI ACNGT 2 cut(s) 482, 520
TaqI TCGA 3 cut(s) 722, 1187, 1314
TatI WGTACW 3 cut(s) 513, 913, 929
TauI GCSGC 1 cut(s) 1393
TfiI GAWTC 2 cut(s) 1189, 1354
Tru1I TTAA 3 cut(s) 54, 203, 795
Tru9I TTAA 3 cut(s) 54, 203, 795
TscAI CASTG 5 cut(s) 83, 406, 794, 893, 1476
TseFI GTSAC 2 cut(s) 785, 1112
TseI GCWGC 5 cut(s) 237, 292, 308, 680, 1013
Tsp45I GTSAC 2 cut(s) 785, 1112
TspDTI ATGAA 2 cut(s) 214, 410
TspGWI ACGGA 1 cut(s) 1028
TspRI CASTG 5 cut(s) 83, 406, 794, 893, 1476
Van91I CCANNNNNTGG 1 cut(s) 609
VpaK11BI GGWCC 1 cut(s) 813
XapI RAATTY 2 cut(s) 651, 1063
XceI RCATGY 2 cut(s) 1090, 1387
XspI CTAG 5 cut(s) 351, 564, 573, 897, 1212
ZrmI AGTACT 1 cut(s) 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.