Rw2G000880

Zinc-finger of C2H2 type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0008822
Physical Location & Seq
Forward (+)
735037 .. 738473
3437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G000880.1

Sequence Viewer

Length: 1968 bp
ATGGAATTCAAATTCCGAGCCGTAGACGTATCCGACCGCCCCTCTCCTCCTTCTTCCTCCACCGTCCGATACTTCTCCTCCGAGCGAACAATCCGAGGTCAATCGGTTCTTCCAACTTGGGCCGTCACGCCGAGTTCGGGTCCAAGAACGAGTCCCGACCCGACTGGTTTTCCGAATCCGGACTATTTCACGATCCACGACCCGATCCTCCACCCGACCAACGCCCGCGACGCCATGCAGCGCCAGATGGAGAAGGACAGGATCAGGGAGGAGATTCTCGCGGCGGAGATGGTGCGGCGGCGAGTTCTTGAAGCCGAGGTGAGGAGAGAGCTCATGCTGGAGCGCGAGATCGCTATGAAGAGAGCCGTCGGCGATGGGCTCGGGTTCGAGGACGACCCGTTCGGCCCAATGCAGGCCCACTCTTTCGACCATCGCTTCGGGTTTAGCCCGAGGAGTAGTTCGCCGTTGGCTATGGTGCCGCGGCTCCCGGAACCTGTGCCCGATAATAATTTGGAGGTCAACAAGGAGTTGACCCCGCCGGCTCGTCCTCCGGAGCTCAACAAGGACAAGTTGATCGTACTGGCTAAACCCAACCCAAACCTTTCTGGACTGAAGCGGAAAAAACTACCATCAGAGGGCGCTAATGAGATTTATCAATATCGTTTGAAGAAGAAGAAGATACCGAAGGAGGAATTGAAGAAGAAGAAGAAGATACCGAAGGAGGAATGGAGTTGTGCTCTGTGTCAGGTTACTGTAGCAAATGAGACAATGTTTGATGGTCACCTTAATGGCAAGAGGCACAAGGCCAGCGAAAAAAGACTTGGAGCTGAAAAACTGGGAAAGAGCTCCAGTAATGCACCACTTTCAAAGAACACTGCAAAACCTTTTGAGCCTAAAGAGTTAGAGACCACTGGTGCTGCAAGCTCACAATTAGGGGCCAAAGAAGAAGGGGGTTTGCTTGACCATAATGAAGCCGGTGATGGTTCAGACAAGAAAATGCAGGATACAGACACTTCAGAAGTGAAAAAAGTGGAACTTCCAGTGCAGAAAGACGAATGCAGAGAGGATTTGAAGAACAATGTTGAAGTAAAAAAGGTGCACATGATGCAGAGAAAGGAAGAACCAACAAAAACAAAAAAATTTGAGTTCCTATGTGAAATTTGTAAAGTTGGTAGCAATAATCCAAAGGTGATGGAGAAGCATAGTAGGGCGAAGAAGCATATGGATAGGCTTGAGGAACTAAAATCGAATAAAGTTCGAACCACCAACGAAGCAAATGTGAACACTCCCACCACAAAGTCCGTGGCATCATCAGGGGCTACGCAGGAGGCAGTAAAGAGGCTTCAGCAAGACACAGAGAACAGTTTTGTACCCACCAATGCGATTAAAGAAGCAAATGCGAGCATTCCAACCACAATTGCTGCGGCATCATTGGTGGTTAATGAGAAGGCAGAAAATGCTAGGCTGCAGGAATCTATTAATGTGACCAAAGAAGCAAATGTGAGCACTCCCACCACAAATTCTGCGGCATCATCAGGGGCTACGCAGGAGGCAGTAAAAAGGCATCAGCAAGATACAAAGAATAGTGTTGCACCTGCTAATGTGACCAAAGAAGCAAATGCGACCATTCCAGTCACGATTTCTGTGGCGTCATTGAGGGCTACTGGGAAGGCAGAAACTGCTAGGCTGCAGGAATCTGCTAATGTGACCAAAGAAACAAATGTGAGCATTCCAACAGCAGCAGCCGTGACATCATGGGGGGCTAGTGAGGAGACAGAAACTGCTAGGCTGCTTGACGAATCTACAAAGAATAAGGTTCCACCCATTAATGTGACCACAGAAGCAAATGCCAACATGCAAAGCACAACCTCAATTTCCGTAGAATCATTCTGGTTTACTGAGACGGCTGAAAATTTGAGGAAATTGGAGGCTTATGAAAAGTTGATCAAAGCAAGGTTAACTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-met

Protein Analysis

655

Amino Acids

72.45

Weight (kDa)

9.01

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-met PF12874 243 - 267 1.5e-07 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1603
Acc36I ACCTGC 1 cut(s) 1603
AccB1I GGYRCC 1 cut(s) 475
AccI GTMKAC 1 cut(s) 24
AccII CGCG 4 cut(s) 228, 281, 345, 481
AccIII TCCGGA 2 cut(s) 178, 550
AclWI GGATC 3 cut(s) 187, 199, 269
AcsI RAATTY 6 cut(s) 5, 11, 1139, 1158, 1519, 1912
AcuI CTGAAG 3 cut(s) 632, 999, 1328
AcyI GRCGYC 2 cut(s) 231, 1649
AfaI GTAC 2 cut(s) 579, 1371
AfiI CCNNNNNNNGG 4 cut(s) 137, 321, 412, 635
AgsI TTSAA 7 cut(s) 10, 311, 667, 697, 867, 1072, 1085
AjuI GAANNNNNNNTTGG 2 cut(s) 804, 836
AloI GAACNNNNNNTCC 2 cut(s) 383, 415
AluBI AGCT 5 cut(s) 331, 556, 827, 846, 924
AluI AGCT 5 cut(s) 331, 556, 827, 846, 924
Alw21I GWGCWC 6 cut(s) 333, 558, 739, 848, 1101, 1508
Alw26I GTCTC 4 cut(s) 758, 899, 1766, 1895
Alw44I GTGCAC 1 cut(s) 1097
AlwI GGATC 3 cut(s) 187, 199, 269
AlwNI CAGNNNCTG 2 cut(s) 1679, 1781
Ama87I CYCGRG 2 cut(s) 380, 448
Aor13HI TCCGGA 2 cut(s) 178, 550
AoxI GGCC 5 cut(s) 120, 403, 414, 804, 936
ApaLI GTGCAC 1 cut(s) 1097
ApeKI GCWGC 8 cut(s) 238, 917, 1421, 1465, 1687, 1739, 1742, 1789
ApoI RAATTY 6 cut(s) 5, 11, 1139, 1158, 1519, 1912
ArsI GACNNNNNNTTYG 4 cut(s) 383, 415, 419, 451
AseI ATTAAT 2 cut(s) 1479, 1827
AspLEI GCGC 3 cut(s) 243, 345, 641
AspS9I GGNCC 5 cut(s) 120, 140, 404, 415, 936
AsuC2I CCSGG 1 cut(s) 488
AsuHPI GGTGA 4 cut(s) 331, 773, 989, 1201
AsuII TTCGAA 1 cut(s) 1258
AvaI CYCGRG 2 cut(s) 380, 448
AvaII GGWCC 1 cut(s) 140
BaeGI GKGCMC 2 cut(s) 501, 1101
BanI GGYRCC 1 cut(s) 475
BanII GRGCYC 4 cut(s) 333, 381, 558, 848
BarI GAAGNNNNNNTAC 2 cut(s) 1326, 1358
Bbv12I GWGCWC 6 cut(s) 333, 558, 739, 848, 1101, 1508
BbvI GCAGC 8 cut(s) 250, 904, 1408, 1452, 1674, 1751, 1754, 1776
BccI CCATC 8 cut(s) 241, 283, 368, 438, 637, 770, 974, 1186
BceAI ACGGC 6 cut(s) 5, 107, 350, 448, 1730, 1920
BciVI GTATCC 2 cut(s) 40, 997
BclI TGATCA 1 cut(s) 1944
BcnI CCSGG 1 cut(s) 488
BcoDI GTCTC 4 cut(s) 758, 899, 1766, 1895
BfaI CTAG 4 cut(s) 1461, 1683, 1764, 1785
BfmI CTRYAG 3 cut(s) 753, 1466, 1688
BfoI RGCGCY 2 cut(s) 244, 642
BfuAI ACCTGC 1 cut(s) 1603
BfuI GTATCC 2 cut(s) 40, 997
Bme1390I CCNGG 1 cut(s) 488
Bme18I GGWCC 1 cut(s) 140
BmeT110I CYCGRG 2 cut(s) 380, 448
BmgT120I GGNCC 5 cut(s) 120, 140, 404, 415, 936
BmiI GGNNCC 6 cut(s) 141, 477, 485, 492, 937, 1818
BmrFI CCNGG 1 cut(s) 488
BmrI ACTGGG 2 cut(s) 845, 1674
BmsI GCATC 5 cut(s) 1095, 1316, 1436, 1538, 1573
BmuI ACTGGG 2 cut(s) 845, 1674
BplI GAGNNNNNCTC 2 cut(s) 721, 753
BpmI CTGGAG 2 cut(s) 359, 832
Bpu14I TTCGAA 1 cut(s) 1258
BpuEI CTTGAG 1 cut(s) 1253
BpuMI CCSGG 1 cut(s) 488
BsaHI GRCGYC 2 cut(s) 231, 1649
BsaI GGTCTC 1 cut(s) 899
BsaJI CCNNGG 5 cut(s) 94, 315, 449, 479, 1302
BsaWI WCCGGW 2 cut(s) 178, 550
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 4 cut(s) 137, 321, 412, 635
Bse118I RCCGGY 2 cut(s) 538, 974
Bse1I ACTGG 8 cut(s) 169, 585, 840, 849, 916, 1040, 1631, 1669
BseAI TCCGGA 2 cut(s) 178, 550
BseDI CCNNGG 5 cut(s) 94, 315, 449, 479, 1302
BseLI CCNNNNNNNGG 4 cut(s) 137, 321, 412, 635
BseMII CTCAG 1 cut(s) 1890
BseNI ACTGG 8 cut(s) 169, 585, 840, 849, 916, 1040, 1631, 1669
BseRI GAGGAG 6 cut(s) 36, 67, 284, 337, 466, 1784
BseSI GKGCMC 2 cut(s) 501, 1101
BseXI GCAGC 8 cut(s) 250, 904, 1408, 1452, 1674, 1751, 1754, 1776
BsgI GTGCAG 1 cut(s) 1064
Bsh1236I CGCG 4 cut(s) 228, 281, 345, 481
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 5 cut(s) 122, 405, 416, 806, 938
BshNI GGYRCC 1 cut(s) 475
BsiEI CGRYCG 1 cut(s) 37
BsiHKAI GWGCWC 6 cut(s) 333, 558, 739, 848, 1101, 1508
BsiHKCI CYCGRG 2 cut(s) 380, 448
BsiSI CCGG 5 cut(s) 179, 488, 539, 551, 975
BslFI GGGAC 1 cut(s) 138
BslI CCNNNNNNNGG 4 cut(s) 137, 321, 412, 635
BsmAI GTCTC 4 cut(s) 758, 899, 1766, 1895
BsmBI CGTCTC 1 cut(s) 1895
BsmFI GGGAC 1 cut(s) 138
BsmI GAATGC 3 cut(s) 1061, 1404, 1728
BsnI GGCC 5 cut(s) 122, 405, 416, 806, 938
Bso31I GGTCTC 1 cut(s) 899
BsoBI CYCGRG 2 cut(s) 380, 448
Bsp119I TTCGAA 1 cut(s) 1258
Bsp1286I GDGCHC 8 cut(s) 333, 381, 501, 558, 739, 848, 1101, 1508
Bsp13I TCCGGA 2 cut(s) 178, 550
Bsp143I GATC 6 cut(s) 192, 204, 261, 348, 573, 1944
BspANI GGCC 5 cut(s) 122, 405, 416, 806, 938
BspCNI CTCAG 1 cut(s) 1891
BspEI TCCGGA 2 cut(s) 178, 550
BspFNI CGCG 4 cut(s) 228, 281, 345, 481
BspLI GGNNCC 6 cut(s) 141, 477, 485, 492, 937, 1818
BspMAI CTGCAG 2 cut(s) 1470, 1692
BspMI ACCTGC 1 cut(s) 1603
BspPI GGATC 3 cut(s) 187, 199, 269
BspT104I TTCGAA 1 cut(s) 1258
BspT107I GGYRCC 1 cut(s) 475
BspTNI GGTCTC 1 cut(s) 899
BsrFI RCCGGY 2 cut(s) 538, 974
BsrI ACTGG 8 cut(s) 169, 585, 840, 849, 916, 1040, 1631, 1669
BssAI RCCGGY 2 cut(s) 538, 974
BssECI CCNNGG 5 cut(s) 94, 315, 449, 479, 1302
BssMI GATC 6 cut(s) 192, 204, 261, 348, 573, 1944
BssNI GRCGYC 2 cut(s) 231, 1649
Bst4CI ACNGT 3 cut(s) 64, 754, 1364
Bst6I CTCTTC 1 cut(s) 353
BstACI GRCGYC 2 cut(s) 231, 1649
BstAPI GCANNNNNTGC 3 cut(s) 1105, 1457, 1679
BstBI TTCGAA 1 cut(s) 1258
BstC8I GCNNGC 6 cut(s) 226, 414, 540, 808, 922, 1402
BstDEI CTNAG 1 cut(s) 1899
BstDSI CCRYGG 2 cut(s) 479, 1302
BstEII GGTNACC 1 cut(s) 779
BstFNI CGCG 4 cut(s) 228, 281, 345, 481
BstH2I RGCGCY 2 cut(s) 244, 642
BstHHI GCGC 3 cut(s) 243, 345, 641
BstKTI GATC 6 cut(s) 195, 207, 264, 351, 576, 1947
BstMAI GTCTC 4 cut(s) 758, 899, 1766, 1895
BstMBI GATC 6 cut(s) 192, 204, 261, 348, 573, 1944
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 4 cut(s) 230, 1105, 1457, 1679
BstNSI RCATGY 1 cut(s) 1858
BstPI GGTNACC 1 cut(s) 779
BstSCI CCNGG 1 cut(s) 486
BstSFI CTRYAG 3 cut(s) 753, 1466, 1688
BstSLI GKGCMC 2 cut(s) 501, 1101
BstUI CGCG 4 cut(s) 228, 281, 345, 481
BstV1I GCAGC 8 cut(s) 250, 904, 1408, 1452, 1674, 1751, 1754, 1776
BsuI GTATCC 2 cut(s) 40, 997
BsuRI GGCC 5 cut(s) 122, 405, 416, 806, 938
BtgI CCRYGG 2 cut(s) 479, 1302
BtgZI GCGATG 2 cut(s) 387, 416
BtsI GCAGTG 1 cut(s) 873
BtsIMutI CAGTG 3 cut(s) 873, 909, 1047
BveI ACCTGC 1 cut(s) 1603
Cac8I GCNNGC 6 cut(s) 226, 414, 540, 808, 922, 1402
CaiI CAGNNNCTG 2 cut(s) 1679, 1781
CfoI GCGC 3 cut(s) 243, 345, 641
Cfr10I RCCGGY 2 cut(s) 538, 974
Cfr13I GGNCC 5 cut(s) 120, 140, 404, 415, 936
Cfr42I CCGCGG 1 cut(s) 482
CseI GACGC 2 cut(s) 239, 1638
Csp6I GTAC 2 cut(s) 578, 1370
CspCI CAANNNNNGTGG 2 cut(s) 1284, 1319
CviAII CATG 5 cut(s) 235, 334, 1102, 1755, 1855
CviQI GTAC 2 cut(s) 578, 1370
DdeI CTNAG 1 cut(s) 1899
DpnI GATC 6 cut(s) 194, 206, 263, 350, 575, 1946
DpnII GATC 6 cut(s) 192, 204, 261, 348, 573, 1944
Eam1104I CTCTTC 1 cut(s) 353
EarI CTCTTC 1 cut(s) 353
EciI GGCGGA 1 cut(s) 299
Ecl136II GAGCTC 3 cut(s) 331, 556, 846
Eco24I GRGCYC 4 cut(s) 333, 381, 558, 848
Eco31I GGTCTC 1 cut(s) 899
Eco47I GGWCC 1 cut(s) 140
Eco53kI GAGCTC 3 cut(s) 331, 556, 846
Eco57I CTGAAG 3 cut(s) 632, 999, 1328
Eco88I CYCGRG 2 cut(s) 380, 448
Eco91I GGTNACC 1 cut(s) 779
EcoICRI GAGCTC 3 cut(s) 331, 556, 846
EcoO65I GGTNACC 1 cut(s) 779
EcoRI GAATTC 1 cut(s) 5
EcoT38I GRGCYC 4 cut(s) 333, 381, 558, 848
Esp3I CGTCTC 1 cut(s) 1895
FaeI CATG 5 cut(s) 238, 337, 1105, 1758, 1858
FalI AAGNNNNNCTT 2 cut(s) 1020, 1052
FaqI GGGAC 1 cut(s) 138
FatI CATG 5 cut(s) 234, 333, 1101, 1754, 1854
FauI CCCGC 2 cut(s) 233, 543
FauNDI CATATG 1 cut(s) 1221
FbaI TGATCA 1 cut(s) 1944
FblI GTMKAC 1 cut(s) 24
FriOI GRGCYC 4 cut(s) 333, 381, 558, 848
FspBI CTAG 4 cut(s) 1461, 1683, 1764, 1785
GlaI GCGC 3 cut(s) 242, 344, 640
GsuI CTGGAG 2 cut(s) 359, 832
HaeII RGCGCY 2 cut(s) 244, 642
HaeIII GGCC 5 cut(s) 122, 405, 416, 806, 938
HapII CCGG 5 cut(s) 179, 488, 539, 551, 975
HgaI GACGC 2 cut(s) 239, 1638
HhaI GCGC 3 cut(s) 243, 345, 641
Hin1I GRCGYC 2 cut(s) 231, 1649
Hin1II CATG 5 cut(s) 238, 337, 1105, 1758, 1858
Hin6I GCGC 3 cut(s) 241, 343, 639
HinP1I GCGC 3 cut(s) 241, 343, 639
HincII GTYRAC 3 cut(s) 520, 531, 1959
HindII GTYRAC 3 cut(s) 520, 531, 1959
HinfI GANTC 7 cut(s) 151, 175, 274, 1472, 1694, 1799, 1883
HpaI GTTAAC 1 cut(s) 1959
HpaII CCGG 5 cut(s) 179, 488, 539, 551, 975
HphI GGTGA 4 cut(s) 331, 773, 989, 1201
Hpy166II GTNNAC 7 cut(s) 25, 520, 531, 1099, 1282, 1896, 1959
Hpy188I TCNGA 9 cut(s) 17, 34, 68, 82, 95, 174, 634, 988, 1018
Hpy188III TCNNGA 7 cut(s) 155, 179, 190, 308, 551, 606, 1636
Hpy8I GTNNAC 7 cut(s) 25, 520, 531, 1099, 1282, 1896, 1959
Hpy99I CGWCG 2 cut(s) 233, 371
HpyAV CCTTC 7 cut(s) 60, 247, 679, 712, 941, 1441, 1663
HpyCH4III ACNGT 3 cut(s) 64, 754, 1364
HpyCH4IV ACGT 1 cut(s) 27
HpyF10VI GCNNNNNNNGC 4 cut(s) 230, 1105, 1457, 1679
HpyF3I CTNAG 1 cut(s) 1899
HpySE526I ACGT 1 cut(s) 27
Hsp92I GRCGYC 2 cut(s) 231, 1649
Hsp92II CATG 5 cut(s) 238, 337, 1105, 1758, 1858
HspAI GCGC 3 cut(s) 241, 343, 639
Kpn2I TCCGGA 2 cut(s) 178, 550
KroI GCCGGC 1 cut(s) 538
KroNI GCCGGC 1 cut(s) 540
Ksp22I TGATCA 1 cut(s) 1944
KspAI GTTAAC 1 cut(s) 1959
KspI CCGCGG 1 cut(s) 482
Kzo9I GATC 6 cut(s) 192, 204, 261, 348, 573, 1944
LmnI GCTCC 5 cut(s) 340, 489, 553, 824, 851
Lsp1109I GCAGC 8 cut(s) 250, 904, 1408, 1452, 1674, 1751, 1754, 1776
LweI GCATC 5 cut(s) 1095, 1316, 1436, 1538, 1573
MaeI CTAG 4 cut(s) 1461, 1683, 1764, 1785
MaeII ACGT 1 cut(s) 27
MaeIII GTNAC 9 cut(s) 124, 748, 779, 1483, 1603, 1633, 1705, 1747, 1831
MalI GATC 6 cut(s) 194, 206, 263, 350, 575, 1946
MboI GATC 6 cut(s) 192, 204, 261, 348, 573, 1944
MfeI CAATTG 1 cut(s) 1416
MhlI GDGCHC 8 cut(s) 333, 381, 501, 558, 739, 848, 1101, 1508
MlyI GAGTC 1 cut(s) 160
MmeI TCCRAC 4 cut(s) 57, 137, 1433, 1757
MroI TCCGGA 2 cut(s) 178, 550
MroNI GCCGGC 1 cut(s) 538
MseI TTAA 6 cut(s) 786, 1386, 1440, 1479, 1827, 1958
MslI CAYNNNNRTG 2 cut(s) 786, 1829
MspA1I CMGCKG 1 cut(s) 481
MspI CCGG 5 cut(s) 179, 488, 539, 551, 975
MspR9I CCNGG 1 cut(s) 488
MunI CAATTG 1 cut(s) 1416
Mva1269I GAATGC 3 cut(s) 1061, 1404, 1728
MvnI CGCG 4 cut(s) 228, 281, 345, 481
MwoI GCNNNNNNNGC 4 cut(s) 230, 1105, 1457, 1679
NaeI GCCGGC 1 cut(s) 540
NciI CCSGG 1 cut(s) 488
NdeI CATATG 1 cut(s) 1221
NdeII GATC 6 cut(s) 192, 204, 261, 348, 573, 1944
NgoMIV GCCGGC 1 cut(s) 538
NlaIII CATG 5 cut(s) 238, 337, 1105, 1758, 1858
NlaIV GGNNCC 6 cut(s) 141, 477, 485, 492, 937, 1818
NmeAIII GCCGAG 2 cut(s) 156, 340
NmuCI GTSAC 8 cut(s) 124, 779, 1483, 1603, 1633, 1705, 1747, 1831
NspI RCATGY 1 cut(s) 1858
NspV TTCGAA 1 cut(s) 1258
PaqCI CACCTGC 1 cut(s) 1603
PctI GAATGC 3 cut(s) 1061, 1404, 1728
PdiI GCCGGC 1 cut(s) 540
PfeI GAWTC 6 cut(s) 175, 274, 1472, 1694, 1799, 1883
PfoI TCCNGGA 1 cut(s) 486
PleI GAGTC 1 cut(s) 159
PpsI GAGTC 1 cut(s) 159
PshBI ATTAAT 2 cut(s) 1479, 1827
Psp124BI GAGCTC 3 cut(s) 333, 558, 848
PspEI GGTNACC 1 cut(s) 779
PspN4I GGNNCC 6 cut(s) 141, 477, 485, 492, 937, 1818
PspPI GGNCC 5 cut(s) 120, 140, 404, 415, 936
PstI CTGCAG 2 cut(s) 1470, 1692
PstNI CAGNNNCTG 2 cut(s) 1679, 1781
RsaI GTAC 2 cut(s) 579, 1371
RsaNI GTAC 2 cut(s) 578, 1370
RseI CAYNNNNRTG 2 cut(s) 786, 1829
SacI GAGCTC 3 cut(s) 333, 558, 848
SacII CCGCGG 1 cut(s) 482
SaqAI TTAA 6 cut(s) 786, 1386, 1440, 1479, 1827, 1958
Sau3AI GATC 6 cut(s) 192, 204, 261, 348, 573, 1944
Sau96I GGNCC 5 cut(s) 120, 140, 404, 415, 936
SchI GAGTC 1 cut(s) 160
ScrFI CCNGG 1 cut(s) 488
SduI GDGCHC 8 cut(s) 333, 381, 501, 558, 739, 848, 1101, 1508
SfaNI GCATC 5 cut(s) 1095, 1316, 1436, 1538, 1573
SfcI CTRYAG 3 cut(s) 753, 1466, 1688
Sfr303I CCGCGG 1 cut(s) 482
SfuI TTCGAA 1 cut(s) 1258
SgrBI CCGCGG 1 cut(s) 482
SinI GGWCC 1 cut(s) 140
SmiMI CAYNNNNRTG 2 cut(s) 786, 1829
SmlI CTYRAG 1 cut(s) 1232
SmoI CTYRAG 1 cut(s) 1232
SspMI CTAG 4 cut(s) 1461, 1683, 1764, 1785
SstI GAGCTC 3 cut(s) 333, 558, 848
StyD4I CCNGG 1 cut(s) 486
TaaI ACNGT 3 cut(s) 64, 754, 1364
TaiI ACGT 1 cut(s) 30
TaqI TCGA 4 cut(s) 387, 426, 1247, 1258
TauI GCSGC 7 cut(s) 284, 298, 301, 481, 484, 1427, 1529
TfiI GAWTC 6 cut(s) 175, 274, 1472, 1694, 1799, 1883
Tru1I TTAA 6 cut(s) 786, 1386, 1440, 1479, 1827, 1958
Tru9I TTAA 6 cut(s) 786, 1386, 1440, 1479, 1827, 1958
TscAI CASTG 3 cut(s) 880, 916, 1047
TseFI GTSAC 8 cut(s) 124, 779, 1483, 1603, 1633, 1705, 1747, 1831
TseI GCWGC 8 cut(s) 238, 917, 1421, 1465, 1687, 1739, 1742, 1789
Tsp45I GTSAC 8 cut(s) 124, 779, 1483, 1603, 1633, 1705, 1747, 1831
TspDTI ATGAA 3 cut(s) 371, 984, 1950
TspGWI ACGGA 2 cut(s) 1291, 1867
TspRI CASTG 3 cut(s) 880, 916, 1047
VneI GTGCAC 1 cut(s) 1097
VpaK11BI GGWCC 1 cut(s) 140
VspI ATTAAT 2 cut(s) 1479, 1827
XapI RAATTY 6 cut(s) 5, 11, 1139, 1158, 1519, 1912
XceI RCATGY 1 cut(s) 1858
XcmI CCANNNNNNNNNTGG 1 cut(s) 1300
XmiI GTMKAC 1 cut(s) 24
XspI CTAG 4 cut(s) 1461, 1683, 1764, 1785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.