Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0009544

Physical Location & Seq

Genomic Coordinates Forward (+)

32818556 .. 32825647

Gene Structure 7092 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G025040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGTACCGATGGAAGCACATATATGCAGCGGTAAATAGGGCTATTTGGTTGCTTTTGCTTTGTTGTGTGATGTCTGTCGCTGATGCCAATGTACCCTATGATTTACACAAAGCGCCCACAGTATCTTCGACGAGTGCACCTTTGGCAGCACCTCCTATGCCAAATCTTCCTTTGCCAGCCAGTATTGCCCCTCAGTCTATTGCTGGTTCAATTCCTCCTGGTTTAGATAAGCCACCAATCTCTCCATCCAGTTCCAGTAAACTGTTGCAAACAGAATATGGTACTGAGACGGGAAGTCAGGGTTGCAATTGTGTTTATCCCATAAAGCTTGACATTCTCCTGTTAAATGTTTCAACAAATCCTAATTGGAAACTCTTTCTTGACGACTTTGCTAAGCAGCTTGGTCTGGAAGTTTCTCAAATAGAGCTGATTAACTTTTATGTACTCAATTATGCAAGATTAAATATTTCAATGGATATTACTCCACATTCAGGGGTCAGTTTCTCTGCCAGTGATGCATCTGCAATAAACTCTTCTCTTGTCATGCACAAGGTTAATTTAGACCCTTCATTAGTGGGTAATTACAAACTCCTCAATATCACTTGGTTTAAGCCTCCACCTCCTTCTCAAGCTCCTGTTGCAACATCACCATTGGAAACCCCACCAAAACCATCACCAGCTCTTACATCCACAAGTGCTTCAAATAAAGGGAAACATTCAAATTGGATTCGTATTATTGGTATTGGTGCTGGCATACTGTTCCTTGCCATTATATCTGTGCTTATACTTTGTTTATGCATATTCCGTAAAGAGAAGATTAAAGCATCTCCTGCAGAAACAGAGAAACAGAGGACTGTTGACACAGTTCTACCAGTAGGATCTCTACCCCACCCTAGCAGCACTCGGTTTCTGGCATATGAAGAACTTAAACAAGCAACGAACAACTTTGAATCTGCAAGTATACTTGGAGAGGGTGGGTTTGGCAGGGTTTTCAAGGGTGTTTTAAGTGATGGTACAGCTGTAGCAATTAAAAGACTTACTAATGGAGGGCAACAGGGTGACAAGGAGTTCTTGGTGGAGGTTGAGATGCTTAGCAGGCTGCATCATCGTAATCTTGTGAAGCTTATCGGTTACTATAGCAGTCGTGACTCCTCACAAAACTTACTTTGCTATGAGCTTGTGCCAAATGGAAGCTTGGAGGCTTGGCTCCATGGTCCCCTGGGAGTGAATTGTCGTTTGGATTGGGACACCAGAATGAAGATTGCACTTGATGCTGCCAGAGGACTTGCTTACCTGCACGAGGACTCACAACCTTGTGTTATTCACAGAGATTTTAAAGCATCCAATATATTGCTGGAGAATGATTTTCATGCCAAAGTTGCTGATTTTGGCCTGGCTAAACAGGCACCTGAAGGCAGAGCAAATTACCTTTCTACTCGGGTGATGGGGACATTTGGGTATGTTGCTCCAGAGTATGCCATGACTGGACACCTACTAGTTAAAAGTGATGTTTACAGCTATGGGGTCGTCCTTCTTGAATTACTTACTGGAAGAAGGCCTGTAGATATGTCGCAGCCATCTGGGCAGGAGAATCTTGTCACTTGGGCAAGGCCAATTCTTAGAGACAAGGATCGGCTGGAAGAGCTTGCTGATCCTAGTCTTGGAGCAAAGTACCCAATGGAAGATTTTGTAAGAGTTTGCACCATTGCAGCAGCTTGTGTTGCTCCTGAGGCAGCCCAACGCCCCACAATGGGTGAAGTTGTACAGTCACTGAAGATGGTTCAAAGGATCACTGAATATCAGGATTCTGCGTTAACCACTTCCACCGCCAGACCCAATCATAGGTCATCAACTACCTTTGAGTCTGATGTATCATCCTCGATGTTCTCTTCTGGTCCATACTCTGGTCTAAGTGCGTTTGATAATGACAACATCTCCCGGACAGCATTTTTTTCTGAAGATCTTCATGAAGGACGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010065 GO:0010068 GO:0010154 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0042335 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0048316 GO:0048507 GO:0048508 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

659

Amino Acids

71.97

Weight (kDa)

6.58

Isoelectric Point (pI)

46.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALE2_N	PF23180	99 - 202	5.1e-08	Receptor-like PK ALE2 N-terminal domain
Pkinase	PF00069	317 - 589	1.2e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	320 - 591	7.1e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009544)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02010
malus_domestica	MD09G1283200.v1.1 MD17G1274000.v1.1
prunus_persica	Prupe.3G011000_v2.0.a1 Prupe.3G011000_v2.0.a1 Prupe.3G011000_v2.0.a1
pyrus_communis	pycom09g19120 pycom17g27200
rosa_chinensis	RchiOBHm_Chr3g0487601
rosa_laevigata	RLG00000022997
rosa_multiflora	Rmu_sc0005285.1_g000001 Rmu_sc0012412.1_g000008
rosa_roxburghii	Rroxscaffold_6G00394660
rosa_rugosa	Rorug03G0234600 Rorug03G0234700 Rorug03G0234800 Rorug03G0234900
rosa_samantha	Rh3AG283200 Rh3BG318900 Rh3CG317000 Rh3DG315200
rosa_wichuraiana	Rw3G025040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1302
AccB1I	GGYRCC	1 cut(s)	1405
AccB7I	CCANNNNNTGG	1 cut(s)	1904
AccI	GTMKAC	1 cut(s)	961
AciI	CCGC	2 cut(s)	29, 1827
AclWI	GGATC	4 cut(s)	886, 1638, 1646, 1796
AcuI	CTGAAG	3 cut(s)	1431, 1793, 1977
AfaI	GTAC	7 cut(s)	5, 93, 283, 444, 1015, 1673, 1764
AfiI	CCNNNNNNNGG	7 cut(s)	491, 1300, 1661, 1750, 1751, 1842, 1904
AgsI	TTSAA	9 cut(s)	210, 354, 471, 702, 720, 950, 994, 1538, 1784
AhdI	GACNNNNNGTC	1 cut(s)	294
AhlI	ACTAGT	1 cut(s)	1495
AjnI	CCWGG	3 cut(s)	217, 1218, 1392
AjuI	GAANNNNNNNTTGG	2 cut(s)	1220, 1252
Alw21I	GWGCWC	1 cut(s)	139
Alw26I	GTCTC	2 cut(s)	281, 1617
Alw44I	GTGCAC	1 cut(s)	135
AlwI	GGATC	4 cut(s)	886, 1638, 1646, 1796
AlwNI	CAGNNNCTG	1 cut(s)	1771
Ama87I	CYCGRG	1 cut(s)	1437
AoxI	GGCC	3 cut(s)	1390, 1556, 1610
ApaLI	GTGCAC	1 cut(s)	135
Asp700I	GAANNNNTTC	1 cut(s)	1962
AspLEI	GCGC	1 cut(s)	115
AspS9I	GGNCC	2 cut(s)	1214, 1895
AsuC2I	CCSGG	1 cut(s)	1939
AsuHPI	GGTGA	5 cut(s)	639, 666, 1070, 1453, 1766
AvaI	CYCGRG	1 cut(s)	1437
AvaII	GGWCC	2 cut(s)	1214, 1895
AxyI	CCTNAGG	1 cut(s)	1728
BaeGI	GKGCMC	1 cut(s)	139
BaeI	ACNNNNGTAYC	2 cut(s)	1005, 1038
BanI	GGYRCC	1 cut(s)	1405
BauI	CACGAG	1 cut(s)	1298
Bbv12I	GWGCWC	1 cut(s)	139
BccI	CCATC	7 cut(s)	3, 253, 679, 1004, 1438, 1585, 1771
BciT130I	CCWGG	3 cut(s)	219, 1220, 1394
BcnI	CCSGG	1 cut(s)	1939
BcoDI	GTCTC	2 cut(s)	281, 1617
BcuI	ACTAGT	1 cut(s)	1495
BfaI	CTAG	3 cut(s)	894, 1496, 1656
BfmI	CTRYAG	4 cut(s)	831, 1020, 1135, 1560
BfoI	RGCGCY	1 cut(s)	116
BfuAI	ACCTGC	1 cut(s)	1302
BglI	GCCNNNNNGGC	1 cut(s)	1582
BglII	AGATCT	1 cut(s)	1960
BlpI	GCTNAGC	2 cut(s)	393, 1091
Bme1390I	CCNGG	4 cut(s)	219, 1220, 1394, 1939
Bme18I	GGWCC	2 cut(s)	1214, 1895
BmeRI	GACNNNNNGTC	1 cut(s)	294
BmeT110I	CYCGRG	1 cut(s)	1437
BmgT120I	GGNCC	2 cut(s)	1214, 1895
BmiI	GGNNCC	3 cut(s)	1208, 1216, 1407
BmrFI	CCNGG	4 cut(s)	219, 1220, 1394, 1939
BmsI	GCATC	8 cut(s)	73, 505, 527, 833, 1077, 1111, 1261, 1349
BpmI	CTGGAG	2 cut(s)	1376, 1452
Bpu1102I	GCTNAGC	2 cut(s)	393, 1091
BpuEI	CTTGAG	1 cut(s)	612
BpuMI	CCSGG	1 cut(s)	1939
BsaJI	CCNNGG	3 cut(s)	1210, 1218, 1219
BsaXI	ACNNNNNCTCC	2 cut(s)	1919, 1949
Bsc4I	CCNNNNNNNGG	7 cut(s)	491, 1300, 1661, 1750, 1751, 1842, 1904
Bse1I	ACTGG	7 cut(s)	180, 249, 255, 510, 872, 1489, 1552
Bse21I	CCTNAGG	1 cut(s)	1728
Bse3DI	GCAATG	1 cut(s)	1704
BseBI	CCWGG	3 cut(s)	219, 1220, 1394
BseDI	CCNNGG	3 cut(s)	1210, 1218, 1219
BseGI	GGATG	4 cut(s)	245, 686, 1340, 1874
BseLI	CCNNNNNNNGG	7 cut(s)	491, 1300, 1661, 1750, 1751, 1842, 1904
BseMI	GCAATG	1 cut(s)	1704
BseMII	CTCAG	3 cut(s)	206, 276, 1719
BseNI	ACTGG	7 cut(s)	180, 249, 255, 510, 872, 1489, 1552
BseRI	GAGGAG	2 cut(s)	581, 1141
BseSI	GKGCMC	1 cut(s)	139
BsgI	GTGCAG	1 cut(s)	1280
BshFI	GGCC	3 cut(s)	1392, 1558, 1612
BshNI	GGYRCC	1 cut(s)	1405
BsiHKAI	GWGCWC	1 cut(s)	139
BsiHKCI	CYCGRG	1 cut(s)	1437
BsiSI	CCGG	1 cut(s)	1939
BslFI	GGGAC	3 cut(s)	1200, 1259, 1462
BslI	CCNNNNNNNGG	7 cut(s)	491, 1300, 1661, 1750, 1751, 1842, 1904
BsmAI	GTCTC	2 cut(s)	281, 1617
BsmBI	CGTCTC	1 cut(s)	281
BsmFI	GGGAC	3 cut(s)	1200, 1259, 1462
BsnI	GGCC	3 cut(s)	1392, 1558, 1612
BsoBI	CYCGRG	1 cut(s)	1437
Bsp1286I	GDGCHC	1 cut(s)	139
Bsp1407I	TGTACA	1 cut(s)	1762
Bsp143I	GATC	5 cut(s)	878, 1630, 1651, 1788, 1960
Bsp1720I	GCTNAGC	2 cut(s)	393, 1091
Bsp19I	CCATGG	1 cut(s)	1210
BspACI	CCGC	2 cut(s)	29, 1827
BspANI	GGCC	3 cut(s)	1392, 1558, 1612
BspCNI	CTCAG	3 cut(s)	205, 277, 1720
BspHI	TCATGA	1 cut(s)	1966
BspLI	GGNNCC	3 cut(s)	1208, 1216, 1407
BspMAI	CTGCAG	1 cut(s)	835
BspMI	ACCTGC	1 cut(s)	1302
BspPI	GGATC	4 cut(s)	886, 1638, 1646, 1796
BspQI	GCTCTTC	1 cut(s)	1635
BspT107I	GGYRCC	1 cut(s)	1405
BsrDI	GCAATG	1 cut(s)	1704
BsrGI	TGTACA	1 cut(s)	1762
BsrI	ACTGG	7 cut(s)	180, 249, 255, 510, 872, 1489, 1552
BssECI	CCNNGG	3 cut(s)	1210, 1218, 1219
BssMI	GATC	5 cut(s)	878, 1630, 1651, 1788, 1960
BssNAI	GTATAC	1 cut(s)	962
BssSI	CACGAG	1 cut(s)	1298
BssT1I	CCWWGG	1 cut(s)	1210
Bst1107I	GTATAC	1 cut(s)	962
Bst2BI	CACGAG	1 cut(s)	1298
Bst2UI	CCWGG	3 cut(s)	219, 1220, 1394
Bst4CI	ACNGT	6 cut(s)	121, 264, 759, 856, 865, 1767
Bst6I	CTCTTC	3 cut(s)	538, 1635, 1894
BstAPI	GCANNNNNTGC	2 cut(s)	830, 1271
BstAUI	TGTACA	1 cut(s)	1762
BstC8I	GCNNGC	4 cut(s)	177, 751, 1097, 1647
BstDEI	CTNAG	7 cut(s)	192, 285, 393, 1091, 1619, 1728, 1910
BstDSI	CCRYGG	1 cut(s)	1210
BstENI	CCTNNNNNAGG	1 cut(s)	1298
BstF5I	GGATG	4 cut(s)	245, 686, 1340, 1874
BstH2I	RGCGCY	1 cut(s)	116
BstHHI	GCGC	1 cut(s)	115
BstKTI	GATC	5 cut(s)	881, 1633, 1654, 1791, 1963
BstMAI	GTCTC	2 cut(s)	281, 1617
BstMBI	GATC	5 cut(s)	878, 1630, 1651, 1788, 1960
BstNI	CCWGG	3 cut(s)	219, 1220, 1394
BstSCI	CCNGG	4 cut(s)	217, 1218, 1392, 1937
BstSFI	CTRYAG	4 cut(s)	831, 1020, 1135, 1560
BstSLI	GKGCMC	1 cut(s)	139
BstX2I	RGATCY	2 cut(s)	878, 1960
BstYI	RGATCY	2 cut(s)	878, 1960
BstZ17I	GTATAC	1 cut(s)	962
Bsu36I	CCTNAGG	1 cut(s)	1728
BsuRI	GGCC	3 cut(s)	1392, 1558, 1612
BtgI	CCRYGG	1 cut(s)	1210
BtsCI	GGATG	4 cut(s)	245, 686, 1340, 1874
BtsIMutI	CAGTG	3 cut(s)	517, 1769, 1791
BveI	ACCTGC	1 cut(s)	1302
Cac8I	GCNNGC	4 cut(s)	177, 751, 1097, 1647
CaiI	CAGNNNCTG	1 cut(s)	1771
CciI	TCATGA	1 cut(s)	1966
CfoI	GCGC	1 cut(s)	115
Cfr13I	GGNCC	2 cut(s)	1214, 1895
Csp6I	GTAC	7 cut(s)	4, 92, 282, 443, 1014, 1672, 1763
CviAII	CATG	5 cut(s)	544, 1211, 1370, 1480, 1967
CviQI	GTAC	7 cut(s)	4, 92, 282, 443, 1014, 1672, 1763
DdeI	CTNAG	7 cut(s)	192, 285, 393, 1091, 1619, 1728, 1910
DpnI	GATC	5 cut(s)	880, 1632, 1653, 1790, 1962
DpnII	GATC	5 cut(s)	878, 1630, 1651, 1788, 1960
DraI	TTTAAA	1 cut(s)	1336
DriI	GACNNNNNGTC	1 cut(s)	294
Eam1104I	CTCTTC	3 cut(s)	538, 1635, 1894
Eam1105I	GACNNNNNGTC	1 cut(s)	294
EarI	CTCTTC	3 cut(s)	538, 1635, 1894
Eco130I	CCWWGG	1 cut(s)	1210
Eco147I	AGGCCT	1 cut(s)	1558
Eco47I	GGWCC	2 cut(s)	1214, 1895
Eco57I	CTGAAG	3 cut(s)	1431, 1793, 1977
Eco81I	CCTNAGG	1 cut(s)	1728
Eco88I	CYCGRG	1 cut(s)	1437
EcoNI	CCTNNNNNAGG	1 cut(s)	1298
EcoRII	CCWGG	3 cut(s)	217, 1218, 1392
EcoT14I	CCWWGG	1 cut(s)	1210
EcoT22I	ATGCAT	2 cut(s)	520, 800
ErhI	CCWWGG	1 cut(s)	1210
Esp3I	CGTCTC	1 cut(s)	281
FaeI	CATG	5 cut(s)	547, 1214, 1373, 1483, 1970
FalI	AAGNNNNNCTT	2 cut(s)	1055, 1087
FaqI	GGGAC	3 cut(s)	1200, 1259, 1462
FatI	CATG	5 cut(s)	543, 1210, 1369, 1479, 1966
FauNDI	CATATG	1 cut(s)	916
FblI	GTMKAC	1 cut(s)	961
FokI	GGATG	4 cut(s)	232, 673, 1327, 1861
FspBI	CTAG	3 cut(s)	894, 1496, 1656
GlaI	GCGC	1 cut(s)	114
GsuI	CTGGAG	2 cut(s)	1376, 1452
HaeII	RGCGCY	1 cut(s)	116
HaeIII	GGCC	3 cut(s)	1392, 1558, 1612
HapII	CCGG	1 cut(s)	1939
HhaI	GCGC	1 cut(s)	115
Hin1II	CATG	5 cut(s)	547, 1214, 1373, 1483, 1970
Hin6I	GCGC	1 cut(s)	113
HinP1I	GCGC	1 cut(s)	113
HincII	GTYRAC	2 cut(s)	859, 1815
HindII	GTYRAC	2 cut(s)	859, 1815
HindIII	AAGCTT	3 cut(s)	326, 1121, 1192
HinfI	GANTC	7 cut(s)	727, 950, 1148, 1304, 1591, 1805, 1862
HpaI	GTTAAC	1 cut(s)	1815
HpaII	CCGG	1 cut(s)	1939
HphI	GGTGA	5 cut(s)	639, 666, 1070, 1453, 1766
Hpy166II	GTNNAC	6 cut(s)	137, 260, 859, 962, 1513, 1815
Hpy188I	TCNGA	2 cut(s)	1867, 1957
Hpy188III	TCNNGA	8 cut(s)	380, 407, 1145, 1469, 1535, 1727, 1802, 1967
Hpy8I	GTNNAC	6 cut(s)	137, 260, 859, 962, 1513, 1815
Hpy99I	CGWCG	1 cut(s)	133
HpyAV	CCTTC	6 cut(s)	576, 633, 1406, 1541, 1548, 1964
HpyCH4III	ACNGT	6 cut(s)	121, 264, 759, 856, 865, 1767
HpyF3I	CTNAG	7 cut(s)	192, 285, 393, 1091, 1619, 1728, 1910
Hsp92II	CATG	5 cut(s)	547, 1214, 1373, 1483, 1970
HspAI	GCGC	1 cut(s)	113
KspAI	GTTAAC	1 cut(s)	1815
Kzo9I	GATC	5 cut(s)	878, 1630, 1651, 1788, 1960
LguI	GCTCTTC	1 cut(s)	1635
LmnI	GCTCC	5 cut(s)	637, 1212, 1471, 1664, 1729
LweI	GCATC	8 cut(s)	73, 505, 527, 833, 1077, 1111, 1261, 1349
MaeI	CTAG	3 cut(s)	894, 1496, 1656
MaeIII	GTNAC	5 cut(s)	1058, 1130, 1145, 1597, 1767
MalI	GATC	5 cut(s)	880, 1632, 1653, 1790, 1962
MboI	GATC	5 cut(s)	878, 1630, 1651, 1788, 1960
MfeI	CAATTG	1 cut(s)	307
MflI	RGATCY	2 cut(s)	878, 1960
MhlI	GDGCHC	1 cut(s)	139
MlyI	GAGTC	3 cut(s)	1142, 1298, 1871
Mph1103I	ATGCAT	2 cut(s)	520, 800
MroXI	GAANNNNTTC	1 cut(s)	1962
MslI	CAYNNNNRTG	2 cut(s)	21, 1253
MspA1I	CMGCKG	2 cut(s)	29, 1019
MspI	CCGG	1 cut(s)	1939
MspR9I	CCNGG	4 cut(s)	219, 1220, 1394, 1939
MunI	CAATTG	1 cut(s)	307
MvaI	CCWGG	3 cut(s)	219, 1220, 1394
NciI	CCSGG	1 cut(s)	1939
NcoI	CCATGG	1 cut(s)	1210
NdeI	CATATG	1 cut(s)	916
NdeII	GATC	5 cut(s)	878, 1630, 1651, 1788, 1960
NlaIII	CATG	5 cut(s)	547, 1214, 1373, 1483, 1970
NlaIV	GGNNCC	3 cut(s)	1208, 1216, 1407
NmuCI	GTSAC	4 cut(s)	1058, 1145, 1597, 1767
NsiI	ATGCAT	2 cut(s)	520, 800
PagI	TCATGA	1 cut(s)	1966
PasI	CCCWGGG	1 cut(s)	1219
PceI	AGGCCT	1 cut(s)	1558
PciSI	GCTCTTC	1 cut(s)	1635
PdmI	GAANNNNTTC	1 cut(s)	1962
PfeI	GAWTC	4 cut(s)	727, 950, 1591, 1805
PflMI	CCANNNNNTGG	1 cut(s)	1904
PfoI	TCCNGGA	1 cut(s)	1937
PleI	GAGTC	3 cut(s)	1142, 1298, 1870
PpsI	GAGTC	3 cut(s)	1142, 1298, 1870
Psp6I	CCWGG	3 cut(s)	217, 1218, 1392
PspGI	CCWGG	3 cut(s)	217, 1218, 1392
PspN4I	GGNNCC	3 cut(s)	1208, 1216, 1407
PspPI	GGNCC	2 cut(s)	1214, 1895
PstI	CTGCAG	1 cut(s)	835
PstNI	CAGNNNCTG	1 cut(s)	1771
PsuI	RGATCY	2 cut(s)	878, 1960
PvuII	CAGCTG	1 cut(s)	1019
RsaI	GTAC	7 cut(s)	5, 93, 283, 444, 1015, 1673, 1764
RsaNI	GTAC	7 cut(s)	4, 92, 282, 443, 1014, 1672, 1763
RseI	CAYNNNNRTG	2 cut(s)	21, 1253
SapI	GCTCTTC	1 cut(s)	1635
Sau3AI	GATC	5 cut(s)	878, 1630, 1651, 1788, 1960
Sau96I	GGNCC	2 cut(s)	1214, 1895
SchI	GAGTC	3 cut(s)	1142, 1298, 1871
ScrFI	CCNGG	4 cut(s)	219, 1220, 1394, 1939
SduI	GDGCHC	1 cut(s)	139
SfaNI	GCATC	8 cut(s)	73, 505, 527, 833, 1077, 1111, 1261, 1349
SfcI	CTRYAG	4 cut(s)	831, 1020, 1135, 1560
SinI	GGWCC	2 cut(s)	1214, 1895
SmiMI	CAYNNNNRTG	2 cut(s)	21, 1253
SmlI	CTYRAG	1 cut(s)	627
SmoI	CTYRAG	1 cut(s)	627
SpeI	ACTAGT	1 cut(s)	1495
SseBI	AGGCCT	1 cut(s)	1558
SsiI	CCGC	2 cut(s)	29, 1827
SspI	AATATT	1 cut(s)	466
SspMI	CTAG	3 cut(s)	894, 1496, 1656
StuI	AGGCCT	1 cut(s)	1558
StyD4I	CCNGG	4 cut(s)	217, 1218, 1392, 1937
StyI	CCWWGG	1 cut(s)	1210
TaaI	ACNGT	6 cut(s)	121, 264, 759, 856, 865, 1767
TaqI	TCGA	2 cut(s)	128, 1880
TatI	WGTACW	2 cut(s)	442, 1762
TfiI	GAWTC	4 cut(s)	727, 950, 1591, 1805
TscAI	CASTG	3 cut(s)	517, 1776, 1798
TseFI	GTSAC	4 cut(s)	1058, 1145, 1597, 1767
Tsp45I	GTSAC	4 cut(s)	1058, 1145, 1597, 1767
TspDTI	ATGAA	5 cut(s)	558, 933, 1271, 1358, 1955
TspGWI	ACGGA	1 cut(s)	794
TspRI	CASTG	3 cut(s)	517, 1776, 1798
Van91I	CCANNNNNTGG	1 cut(s)	1904
VneI	GTGCAC	1 cut(s)	135
VpaK11BI	GGWCC	2 cut(s)	1214, 1895
XagI	CCTNNNNNAGG	1 cut(s)	1298
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1351
XmiI	GTMKAC	1 cut(s)	961
XmnI	GAANNNNTTC	1 cut(s)	1962
XspI	CTAG	3 cut(s)	894, 1496, 1656
Zsp2I	ATGCAT	2 cut(s)	520, 800

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.