AT1G01440

Probable zinc-ribbon domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008950
Physical Location & Seq
Reverse (-)
159628 .. 162953
3326 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G01440.1

Sequence Viewer

Length: 1995 bp
ATGAGGACAAGCGGTGACGTTTATGGAGCAGATACTGGTTCCTCAAGAAGTGATGAAGACAGAGGCTTTAAGGAGGATCTCAATGAATCCGCTACTAGCCCGATGAGAAATCGCCTAGACGATTCGAATTCACGACCTGGTTCTCAGAGATTCGTCAAGAGCTCGAGAAAGGAGGAAGAGACTGATTCAGATTCTTCTTCTTCTAAGAACACAACCACCAGAAACAACCCAATTCAGTACACTGATAAACAACAAGCCGAGCTTTTGAGAAAGCTTGATTCTATTAAAGATCATCTTCTCCGTGGTGGAGGTAATAATGCTACTGTTGTTGATCAGCCACCAATGGGTTTCCATGCCCATCATGGACCTCCTCCTTCTTATTACAATCCATACCCTGAGCCATTTCCTTATGGAATGTATCCTACCGCGAGTAACCAACCTCATGTTCCAGCTTATAGAGACCCTTATGGATTCCCAGTGCATAGGATACCTCAAAACTTTTATCAAGGACCAAGTCATTACCCTAATCAGATGCCGCCTCGTCCACCCTATCCTCAAGGACAGTATGTAGACATTGGCTCTGATATACTTGAGTCACAGTTACAGGACCCTAGATTCTTTCCGGGTACGCCAAGTAGGTATGGTGATGTCCCATTTAGCCCGGCTTTGCACCACGGTGAGAAAGTTGGACCCTTTAGTCCACATGGTGGTGTTCACACGAGGTGGCCTAGTGAAATTGATTCTGAAATGGGTGGTGCTTTTGCTCGTGGGTATGTTCAACAAGCTGTGTCTGATACTGATTCACGTCGTTGCCATCCTCTAGCAGGCGGTGCGCCTTTTATTGCTTGTCACAGTTGCTTTGAGCTGCTATATGTGCCTAAGAAGAAGCTTCTTGGTCAGGAAAGGCAACAAAAGATGCAATGTGGTGCTTGTTCTGAGGTTATCACGTTCAGAGTTGTTGATAAGAAGCTTGTTTTCTCATCTTCTGCCCTGGGGGAAACTACGAACCGGGTTTCTGTAGAGGTTGAAGATAGAAGCTCACCAATCCCTGTGGTAGATGATTATCCACTCAATGATGAAGAACCAAGAATACACCAGGAAACGAAAATTGTCCATGCTGTATCGCCTAGTGATCACTCAAACGATGAAGACAGGTCAAGCATTTCTAGTGAGCCGCGGAAACAGGTCGTCAAGTCTGTTCGCAGCAGAGCCCAAGGCGCGAAGGTTCCTCCTCCTCCTCCTCCGGAAAAGTCCAATCTTCTTGAGCTCTTTGAGTATTCTAATGTAAACCGAGCTGCAATCACTTACGGAATGGCGCAGTTAGGGTACTATAAGCAAGAATCATACACGAAACAAGACTCCCTGAAATCAGAATCAGTAGCTACTGAGACAGATGTTTCTTATAATGAGTACTATACTAACACCGAGGAGTCTGAAGATTCAAGGATCTCAAAAGCCAGCAAAGAAGGGAGACGACCAAGAAACCGAAAGCAGAGTAGTGAGCACAGTTTCGCAGAGGTCACAAATAATATCAGTTCTAACGACCAAAACAACGAGCAGCTAGAGGTTTGGGTGAATGGGTATCTGATACCAGAAGATCTGGTTATTAGCGCTGAGAAACAAGCTGGGCCAGTTCAAGCTGGCAAATACTGGTATGATTACCGTGCTGGATTCTGGGGAGTGATGGGAAACCCTTGTCTCGGTATAATACCACCATTTATAGAGGAGTTTAGTCGACCAATGCCGGATAACTGCGGTGCAGGAAACACGAGTGTGTTTGTAAACGGAAGAGAGCTTCACGAGAGAGACCTAGAGTTACTATCAAGTAGAGGTCTTCCTCGAGGCAAGAACCGTTCTTACATCATTGATATAGCAGGAAGAGTTCTTGATGGAGACTCTGGTGAAGAACTTAAGAGTCTTGGCAGATTAGCTCCAACGGTTGACAAGGTGAAGCATGGATTTGGCATGAGGGTTCCAAGATCATTAGTCTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zinc_ribbon_12

Protein Analysis

664

Amino Acids

74.07

Weight (kDa)

5.99

Isoelectric Point (pI)

56.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_12 PF11331 275 - 319 2.2e-21 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1404
AasI GACNNNNNNGTC 1 cut(s) 696
AbsI CCTCGAGG 1 cut(s) 1839
AccB7I CCANNNNNTGG 1 cut(s) 707
AccI GTMKAC 2 cut(s) 570, 1735
AccII CGCG 3 cut(s) 428, 1177, 1220
AccIII TCCGGA 1 cut(s) 1243
AciI CCGC 8 cut(s) 12, 90, 426, 536, 828, 1175, 1177, 1755
AclWI GGATC 2 cut(s) 84, 1454
AcsI RAATTY 1 cut(s) 127
AcuI CTGAAG 1 cut(s) 1455
AdeI CACNNNGTG 2 cut(s) 707, 723
AfaI GTAC 4 cut(s) 239, 628, 1328, 1412
AfeI AGCGCT 1 cut(s) 1612
AfiI CCNNNNNNNGG 4 cut(s) 344, 707, 824, 1700
AflII CTTAAG 1 cut(s) 1910
AgsI TTSAA 4 cut(s) 779, 1028, 1443, 1637
AjiI CACGTC 1 cut(s) 806
AjnI CCWGG 3 cut(s) 136, 990, 1095
AjuI GAANNNNNNNTTGG 2 cut(s) 429, 461
AleI CACNNNNGTG 2 cut(s) 675, 1772
Alw21I GWGCWC 3 cut(s) 164, 1269, 1506
Alw26I GTCTC 7 cut(s) 173, 453, 1382, 1465, 1703, 1800, 1887
AlwI GGATC 2 cut(s) 84, 1454
AlwNI CAGNNNCTG 1 cut(s) 35
Ama87I CYCGRG 2 cut(s) 163, 1839
Aor13HI TCCGGA 1 cut(s) 1243
Aor51HI AGCGCT 1 cut(s) 1612
AoxI GGCC 2 cut(s) 725, 1628
ApeKI GCWGC 4 cut(s) 865, 1203, 1295, 1558
ApoI RAATTY 1 cut(s) 127
AspLEI GCGC 4 cut(s) 835, 1220, 1318, 1613
AspS9I GGNCC 5 cut(s) 365, 509, 607, 689, 1628
AsuC2I CCSGG 3 cut(s) 624, 662, 1010
AsuHPI GGTGA 7 cut(s) 26, 656, 689, 1032, 1585, 1913, 1960
AsuII TTCGAA 1 cut(s) 125
AvaI CYCGRG 2 cut(s) 163, 1839
AvaII GGWCC 4 cut(s) 365, 509, 607, 689
BanII GRGCYC 3 cut(s) 164, 1213, 1269
BauI CACGAG 5 cut(s) 718, 765, 1768, 1799, 1990
BbsI GAAGAC 3 cut(s) 63, 1155, 1826
Bbv12I GWGCWC 3 cut(s) 164, 1269, 1506
BbvI GCAGC 4 cut(s) 852, 1215, 1282, 1570
BccI CCATC 4 cut(s) 366, 822, 1678, 1883
BciT130I CCWGG 3 cut(s) 138, 992, 1097
BciVI GTATCC 2 cut(s) 429, 480
BclI TGATCA 2 cut(s) 331, 1132
BcnI CCSGG 3 cut(s) 624, 662, 1010
BcoDI GTCTC 7 cut(s) 173, 453, 1382, 1465, 1703, 1800, 1887
BfaI CTAG 9 cut(s) 96, 116, 612, 729, 821, 1128, 1167, 1562, 1811
BfmI CTRYAG 1 cut(s) 1017
BfoI RGCGCY 1 cut(s) 1614
BfrI CTTAAG 1 cut(s) 1910
BfuI GTATCC 2 cut(s) 429, 480
BglII AGATCT 1 cut(s) 1597
BisI GCNGC 6 cut(s) 536, 866, 1175, 1204, 1296, 1559
BlsI GCNGC 6 cut(s) 537, 867, 1176, 1205, 1297, 1560
BmcAI AGTACT 1 cut(s) 1412
Bme1390I CCNGG 6 cut(s) 138, 624, 662, 992, 1010, 1097
Bme18I GGWCC 4 cut(s) 365, 509, 607, 689
BmeT110I CYCGRG 2 cut(s) 163, 1839
BmgBI CACGTC 1 cut(s) 806
BmgT120I GGNCC 5 cut(s) 365, 509, 607, 689, 1628
BmiI GGNNCC 5 cut(s) 40, 609, 691, 1227, 1974
BmrFI CCNGG 6 cut(s) 138, 624, 662, 992, 1010, 1097
BmrI ACTGGG 1 cut(s) 470
BmsI GCATC 2 cut(s) 522, 906
BmuI ACTGGG 1 cut(s) 470
BpiI GAAGAC 3 cut(s) 63, 1155, 1826
Bpu10I CCTNAGC 1 cut(s) 396
Bpu14I TTCGAA 1 cut(s) 125
BpuEI CTTGAG 4 cut(s) 28, 540, 611, 1283
BpuMI CCSGG 3 cut(s) 624, 662, 1010
BsaBI GATNNNNATC 1 cut(s) 1062
BsaI GGTCTC 2 cut(s) 453, 1800
BsaJI CCNNGG 7 cut(s) 301, 673, 990, 991, 1175, 1213, 1425
BsaWI WCCGGW 1 cut(s) 1243
Bsc4I CCNNNNNNNGG 4 cut(s) 344, 707, 824, 1700
Bse1I ACTGG 4 cut(s) 40, 476, 1631, 1655
Bse3DI GCAATG 1 cut(s) 926
Bse8I GATNNNNATC 1 cut(s) 1062
BseAI TCCGGA 1 cut(s) 1243
BseBI CCWGG 3 cut(s) 138, 992, 1097
BseDI CCNNGG 7 cut(s) 301, 673, 990, 991, 1175, 1213, 1425
BseGI GGATG 1 cut(s) 814
BseJI GATNNNNATC 1 cut(s) 1062
BseLI CCNNNNNNNGG 4 cut(s) 344, 707, 824, 1700
BseMI GCAATG 1 cut(s) 926
BseMII CTCAG 5 cut(s) 158, 387, 927, 1377, 1605
BseNI ACTGG 4 cut(s) 40, 476, 1631, 1655
BseRI GAGGAG 7 cut(s) 360, 1221, 1224, 1227, 1230, 1442, 1739
BseXI GCAGC 4 cut(s) 852, 1215, 1282, 1570
BseYI CCCAGC 1 cut(s) 1625
BsgI GTGCAG 1 cut(s) 1779
Bsh1236I CGCG 3 cut(s) 428, 1177, 1220
BshFI GGCC 2 cut(s) 727, 1630
BsiHKAI GWGCWC 3 cut(s) 164, 1269, 1506
BsiHKCI CYCGRG 2 cut(s) 163, 1839
BsiSI CCGG 5 cut(s) 623, 662, 1009, 1244, 1745
BslFI GGGAC 1 cut(s) 635
BslI CCNNNNNNNGG 4 cut(s) 344, 707, 824, 1700
BsmAI GTCTC 7 cut(s) 173, 453, 1382, 1465, 1703, 1800, 1887
BsmBI CGTCTC 1 cut(s) 1465
BsmFI GGGAC 1 cut(s) 635
BsnI GGCC 2 cut(s) 727, 1630
Bso31I GGTCTC 2 cut(s) 453, 1800
BsoBI CYCGRG 2 cut(s) 163, 1839
Bsp119I TTCGAA 1 cut(s) 125
Bsp1286I GDGCHC 4 cut(s) 164, 1213, 1269, 1506
Bsp13I TCCGGA 1 cut(s) 1243
Bsp143I GATC 7 cut(s) 76, 289, 331, 1132, 1446, 1597, 1979
BspACI CCGC 8 cut(s) 12, 90, 426, 536, 828, 1175, 1177, 1755
BspANI GGCC 2 cut(s) 727, 1630
BspCNI CTCAG 5 cut(s) 157, 388, 928, 1378, 1606
BspEI TCCGGA 1 cut(s) 1243
BspFNI CGCG 3 cut(s) 428, 1177, 1220
BspLI GGNNCC 5 cut(s) 40, 609, 691, 1227, 1974
BspPI GGATC 2 cut(s) 84, 1454
BspT104I TTCGAA 1 cut(s) 125
BspTI CTTAAG 1 cut(s) 1910
BspTNI GGTCTC 2 cut(s) 453, 1800
BsrDI GCAATG 1 cut(s) 926
BsrI ACTGG 4 cut(s) 40, 476, 1631, 1655
BssECI CCNNGG 7 cut(s) 301, 673, 990, 991, 1175, 1213, 1425
BssMI GATC 7 cut(s) 76, 289, 331, 1132, 1446, 1597, 1979
BssSI CACGAG 5 cut(s) 718, 765, 1768, 1799, 1990
BssT1I CCWWGG 1 cut(s) 1213
Bst2BI CACGAG 5 cut(s) 718, 765, 1768, 1799, 1990
Bst2UI CCWGG 3 cut(s) 138, 992, 1097
Bst4CI ACNGT 9 cut(s) 325, 564, 600, 677, 854, 1508, 1664, 1853, 1939
Bst6I CTCTTC 3 cut(s) 171, 1783, 1873
BstAFI CTTAAG 1 cut(s) 1910
BstAPI GCANNNNNTGC 1 cut(s) 830
BstBI TTCGAA 1 cut(s) 125
BstC8I GCNNGC 3 cut(s) 826, 1459, 1642
BstDEI CTNAG 7 cut(s) 144, 204, 396, 879, 936, 1386, 1614
BstDSI CCRYGG 3 cut(s) 301, 673, 1175
BstENI CCTNNNNNAGG 1 cut(s) 822
BstF5I GGATG 1 cut(s) 814
BstFNI CGCG 3 cut(s) 428, 1177, 1220
BstH2I RGCGCY 1 cut(s) 1614
BstHHI GCGC 4 cut(s) 835, 1220, 1318, 1613
BstKTI GATC 7 cut(s) 79, 292, 334, 1135, 1449, 1600, 1982
BstMAI GTCTC 7 cut(s) 173, 453, 1382, 1465, 1703, 1800, 1887
BstMBI GATC 7 cut(s) 76, 289, 331, 1132, 1446, 1597, 1979
BstMWI GCNNNNNNNGC 3 cut(s) 830, 874, 1217
BstNI CCWGG 3 cut(s) 138, 992, 1097
BstSCI CCNGG 6 cut(s) 136, 622, 660, 990, 1008, 1095
BstSFI CTRYAG 1 cut(s) 1017
BstUI CGCG 3 cut(s) 428, 1177, 1220
BstV1I GCAGC 4 cut(s) 852, 1215, 1282, 1570
BstV2I GAAGAC 3 cut(s) 63, 1155, 1826
BstX2I RGATCY 3 cut(s) 76, 1446, 1597
BstYI RGATCY 3 cut(s) 76, 1446, 1597
BsuI GTATCC 2 cut(s) 429, 480
BsuRI GGCC 2 cut(s) 727, 1630
BtgI CCRYGG 3 cut(s) 301, 673, 1175
BtrI CACGTC 1 cut(s) 806
BtsCI GGATG 1 cut(s) 814
BtsIMutI CAGTG 2 cut(s) 240, 483
Cac8I GCNNGC 3 cut(s) 826, 1459, 1642
CaiI CAGNNNCTG 1 cut(s) 35
CfoI GCGC 4 cut(s) 835, 1220, 1318, 1613
Cfr13I GGNCC 5 cut(s) 365, 509, 607, 689, 1628
Cfr42I CCGCGG 1 cut(s) 1178
CsiI ACCWGGT 1 cut(s) 136
Csp6I GTAC 4 cut(s) 238, 627, 1327, 1411
CspCI CAANNNNNGTGG 2 cut(s) 1032, 1067
CviAII CATG 7 cut(s) 353, 362, 443, 704, 1115, 1955, 1966
CviQI GTAC 4 cut(s) 238, 627, 1327, 1411
DdeI CTNAG 7 cut(s) 144, 204, 396, 879, 936, 1386, 1614
DpnI GATC 7 cut(s) 78, 291, 333, 1134, 1448, 1599, 1981
DpnII GATC 7 cut(s) 76, 289, 331, 1132, 1446, 1597, 1979
DraIII CACNNNGTG 2 cut(s) 707, 723
DrdI GACNNNNNNGTC 1 cut(s) 696
DseDI GACNNNNNNGTC 1 cut(s) 696
Eam1104I CTCTTC 3 cut(s) 171, 1783, 1873
EarI CTCTTC 3 cut(s) 171, 1783, 1873
Ecl136II GAGCTC 2 cut(s) 162, 1267
Eco130I CCWWGG 1 cut(s) 1213
Eco24I GRGCYC 3 cut(s) 164, 1213, 1269
Eco31I GGTCTC 2 cut(s) 453, 1800
Eco47I GGWCC 4 cut(s) 365, 509, 607, 689
Eco47III AGCGCT 1 cut(s) 1612
Eco53kI GAGCTC 2 cut(s) 162, 1267
Eco57I CTGAAG 1 cut(s) 1455
Eco88I CYCGRG 2 cut(s) 163, 1839
EcoICRI GAGCTC 2 cut(s) 162, 1267
EcoNI CCTNNNNNAGG 1 cut(s) 822
EcoO109I RGGNCCY 1 cut(s) 607
EcoRI GAATTC 1 cut(s) 127
EcoRII CCWGG 3 cut(s) 136, 990, 1095
EcoT14I CCWWGG 1 cut(s) 1213
EcoT38I GRGCYC 3 cut(s) 164, 1213, 1269
ErhI CCWWGG 1 cut(s) 1213
Esp3I CGTCTC 1 cut(s) 1465
FaeI CATG 7 cut(s) 356, 365, 446, 707, 1118, 1958, 1969
FalI AAGNNNNNCTT 4 cut(s) 246, 278, 279, 311
FaqI GGGAC 1 cut(s) 635
FatI CATG 7 cut(s) 352, 361, 442, 703, 1114, 1954, 1965
FbaI TGATCA 2 cut(s) 331, 1132
FblI GTMKAC 2 cut(s) 570, 1735
Fnu4HI GCNGC 6 cut(s) 536, 866, 1175, 1204, 1296, 1559
FokI GGATG 1 cut(s) 801
FriOI GRGCYC 3 cut(s) 164, 1213, 1269
Fsp4HI GCNGC 6 cut(s) 536, 866, 1175, 1204, 1296, 1559
FspBI CTAG 9 cut(s) 96, 116, 612, 729, 821, 1128, 1167, 1562, 1811
GlaI GCGC 4 cut(s) 834, 1219, 1317, 1612
GluI GCNGC 6 cut(s) 536, 866, 1175, 1204, 1296, 1559
GsaI CCCAGC 1 cut(s) 1629
HaeII RGCGCY 1 cut(s) 1614
HaeIII GGCC 2 cut(s) 727, 1630
HapII CCGG 5 cut(s) 623, 662, 1009, 1244, 1745
HhaI GCGC 4 cut(s) 835, 1220, 1318, 1613
Hin1II CATG 7 cut(s) 356, 365, 446, 707, 1118, 1958, 1969
Hin6I GCGC 4 cut(s) 833, 1218, 1316, 1611
HinP1I GCGC 4 cut(s) 833, 1218, 1316, 1611
HincII GTYRAC 2 cut(s) 1736, 1942
HindII GTYRAC 2 cut(s) 1736, 1942
HindIII AAGCTT 3 cut(s) 272, 887, 968
HpaII CCGG 5 cut(s) 623, 662, 1009, 1244, 1745
HphI GGTGA 7 cut(s) 26, 656, 689, 1032, 1585, 1913, 1960
Hpy166II GTNNAC 9 cut(s) 240, 545, 571, 701, 715, 1288, 1736, 1783, 1942
Hpy8I GTNNAC 9 cut(s) 240, 545, 571, 701, 715, 1288, 1736, 1783, 1942
Hpy99I CGWCG 1 cut(s) 810
HpyAV CCTTC 3 cut(s) 384, 1216, 1460
HpyCH4III ACNGT 9 cut(s) 325, 564, 600, 677, 854, 1508, 1664, 1853, 1939
HpyCH4IV ACGT 3 cut(s) 18, 805, 947
HpyCH4V TGCA 5 cut(s) 481, 670, 919, 1298, 1760
HpyF10VI GCNNNNNNNGC 3 cut(s) 830, 874, 1217
HpyF3I CTNAG 7 cut(s) 144, 204, 396, 879, 936, 1386, 1614
HpySE526I ACGT 3 cut(s) 18, 805, 947
Hsp92II CATG 7 cut(s) 356, 365, 446, 707, 1118, 1958, 1969
HspAI GCGC 4 cut(s) 833, 1218, 1316, 1611
Kpn2I TCCGGA 1 cut(s) 1243
Ksp22I TGATCA 2 cut(s) 331, 1132
KspI CCGCGG 1 cut(s) 1178
Kzo9I GATC 7 cut(s) 76, 289, 331, 1132, 1446, 1597, 1979
LmnI GCTCC 2 cut(s) 26, 1936
Lsp1109I GCAGC 4 cut(s) 852, 1215, 1282, 1570
LweI GCATC 2 cut(s) 522, 906
MabI ACCWGGT 1 cut(s) 136
MaeI CTAG 9 cut(s) 96, 116, 612, 729, 821, 1128, 1167, 1562, 1811
MaeII ACGT 3 cut(s) 18, 805, 947
MaeIII GTNAC 7 cut(s) 14, 431, 594, 600, 848, 1519, 1815
MalI GATC 7 cut(s) 78, 291, 333, 1134, 1448, 1599, 1981
MboI GATC 7 cut(s) 76, 289, 331, 1132, 1446, 1597, 1979
MflI RGATCY 3 cut(s) 76, 1446, 1597
MhlI GDGCHC 4 cut(s) 164, 1213, 1269, 1506
MluCI AATT 4 cut(s) 127, 231, 735, 1107
MlyI GAGTC 5 cut(s) 602, 1352, 1439, 1889, 1924
MmeI TCCRAC 2 cut(s) 667, 1958
MroI TCCGGA 1 cut(s) 1243
MseI TTAA 3 cut(s) 69, 285, 1911
MslI CAYNNNNRTG 3 cut(s) 675, 708, 1772
MspA1I CMGCKG 1 cut(s) 1177
MspCI CTTAAG 1 cut(s) 1910
MspI CCGG 5 cut(s) 623, 662, 1009, 1244, 1745
MspR9I CCNGG 6 cut(s) 138, 624, 662, 992, 1010, 1097
MvaI CCWGG 3 cut(s) 138, 992, 1097
MvnI CGCG 3 cut(s) 428, 1177, 1220
MwoI GCNNNNNNNGC 3 cut(s) 830, 874, 1217
NciI CCSGG 3 cut(s) 624, 662, 1010
NdeII GATC 7 cut(s) 76, 289, 331, 1132, 1446, 1597, 1979
NlaIII CATG 7 cut(s) 356, 365, 446, 707, 1118, 1958, 1969
NlaIV GGNNCC 5 cut(s) 40, 609, 691, 1227, 1974
NmeAIII GCCGAG 1 cut(s) 283
NmuCI GTSAC 4 cut(s) 14, 594, 848, 1519
NspV TTCGAA 1 cut(s) 125
OliI CACNNNNGTG 2 cut(s) 675, 1772
PaeR7I CTCGAG 2 cut(s) 163, 1839
PasI CCCWGGG 1 cut(s) 991
PflFI GACNNNGTC 1 cut(s) 513
PflMI CCANNNNNTGG 1 cut(s) 707
PkrI GCNGC 6 cut(s) 537, 867, 1176, 1205, 1297, 1560
PleI GAGTC 5 cut(s) 601, 1352, 1438, 1889, 1923
PpsI GAGTC 5 cut(s) 601, 1352, 1438, 1889, 1923
PpuMI RGGWCCY 1 cut(s) 607
PsiI TTATAA 1 cut(s) 1404
Psp124BI GAGCTC 2 cut(s) 164, 1269
Psp5II RGGWCCY 1 cut(s) 607
Psp6I CCWGG 3 cut(s) 136, 990, 1095
PspFI CCCAGC 1 cut(s) 1625
PspGI CCWGG 3 cut(s) 136, 990, 1095
PspN4I GGNNCC 5 cut(s) 40, 609, 691, 1227, 1974
PspPI GGNCC 5 cut(s) 365, 509, 607, 689, 1628
PspPPI RGGWCCY 1 cut(s) 607
PspXI VCTCGAGB 1 cut(s) 1839
PsrI GAACNNNNNNTAC 4 cut(s) 1074, 1106, 1841, 1873
PstNI CAGNNNCTG 1 cut(s) 35
PsuI RGATCY 3 cut(s) 76, 1446, 1597
PsyI GACNNNGTC 1 cut(s) 513
RsaI GTAC 4 cut(s) 239, 628, 1328, 1412
RsaNI GTAC 4 cut(s) 238, 627, 1327, 1411
RseI CAYNNNNRTG 3 cut(s) 675, 708, 1772
SacI GAGCTC 2 cut(s) 164, 1269
SacII CCGCGG 1 cut(s) 1178
SalI GTCGAC 1 cut(s) 1734
SaqAI TTAA 3 cut(s) 69, 285, 1911
SatI GCNGC 6 cut(s) 536, 866, 1175, 1204, 1296, 1559
Sau3AI GATC 7 cut(s) 76, 289, 331, 1132, 1446, 1597, 1979
Sau96I GGNCC 5 cut(s) 365, 509, 607, 689, 1628
ScaI AGTACT 1 cut(s) 1412
SchI GAGTC 5 cut(s) 602, 1352, 1439, 1889, 1924
ScrFI CCNGG 6 cut(s) 138, 624, 662, 992, 1010, 1097
SduI GDGCHC 4 cut(s) 164, 1213, 1269, 1506
SexAI ACCWGGT 1 cut(s) 136
SfaNI GCATC 2 cut(s) 522, 906
SfcI CTRYAG 1 cut(s) 1017
Sfr274I CTCGAG 2 cut(s) 163, 1839
Sfr303I CCGCGG 1 cut(s) 1178
SfuI TTCGAA 1 cut(s) 125
SgrBI CCGCGG 1 cut(s) 1178
SinI GGWCC 4 cut(s) 365, 509, 607, 689
SlaI CTCGAG 2 cut(s) 163, 1839
SmiMI CAYNNNNRTG 3 cut(s) 675, 708, 1772
SmlI CTYRAG 7 cut(s) 43, 163, 555, 590, 1262, 1839, 1910
SmoI CTYRAG 7 cut(s) 43, 163, 555, 590, 1262, 1839, 1910
Sse9I AATT 4 cut(s) 127, 231, 735, 1107
SsiI CCGC 8 cut(s) 12, 90, 426, 536, 828, 1175, 1177, 1755
SspMI CTAG 9 cut(s) 96, 116, 612, 729, 821, 1128, 1167, 1562, 1811
SstI GAGCTC 2 cut(s) 164, 1269
StyD4I CCNGG 6 cut(s) 136, 622, 660, 990, 1008, 1095
StyI CCWWGG 1 cut(s) 1213
TaaI ACNGT 9 cut(s) 325, 564, 600, 677, 854, 1508, 1664, 1853, 1939
TaiI ACGT 3 cut(s) 21, 808, 950
TaqI TCGA 4 cut(s) 125, 164, 1735, 1840
TasI AATT 4 cut(s) 127, 231, 735, 1107
TatI WGTACW 2 cut(s) 237, 1410
TauI GCSGC 2 cut(s) 538, 1177
Tru1I TTAA 3 cut(s) 69, 285, 1911
Tru9I TTAA 3 cut(s) 69, 285, 1911
TscAI CASTG 2 cut(s) 247, 483
TseFI GTSAC 4 cut(s) 14, 594, 848, 1519
TseI GCWGC 4 cut(s) 865, 1203, 1295, 1558
Tsp45I GTSAC 4 cut(s) 14, 594, 848, 1519
TspDTI ATGAA 4 cut(s) 69, 99, 1092, 1161
TspGWI ACGGA 3 cut(s) 290, 1323, 1800
TspRI CASTG 2 cut(s) 247, 483
Tth111I GACNNNGTC 1 cut(s) 513
Van91I CCANNNNNTGG 1 cut(s) 707
Vha464I CTTAAG 1 cut(s) 1910
VpaK11BI GGWCC 4 cut(s) 365, 509, 607, 689
XagI CCTNNNNNAGG 1 cut(s) 822
XapI RAATTY 1 cut(s) 127
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XhoI CTCGAG 2 cut(s) 163, 1839
XmiI GTMKAC 2 cut(s) 570, 1735
XspI CTAG 9 cut(s) 96, 116, 612, 729, 821, 1128, 1167, 1562, 1811
ZrmI AGTACT 1 cut(s) 1412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.