Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007366.1

Orthogroup ID

OG0008950

Physical Location & Seq

Genomic Coordinates Reverse (-)

58932 .. 62061

Gene Structure 3130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007366.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2619 bp

atggacttgaggcgaggtagaggaaaagagagggtctttggagaaagaaaggttgattccagtagtagtagtactagttcattaagaagagagaataaagaggttttcgatgataatcatattaatgttagggaaggggttaggggtttaaggcttgaggaaagtggtgcaccgcagaaaaaggagtttgttgaaagatatagtcgattatccgagttcccaattgataatagaatccctggaaatgatcttgacacgaatatgaataggtccgagtctgtaaattcaagtgtaggggatatttcagcccaattaaggtatcttgctgggtcattgagatcaagggaaagtatggaccagtggggtgttgaaagagatcggtatgaggggttttatggaaacatcagggttgctgccgagcgaggaagaatgccaatttcttcttatcctaatgaggggccttcaaattaccatctagagtcttcttatggtcatggtgagcacaagtatgatgtgaatggagttgaaaatttaggacctgatcgagttgagcttcttaggaaaatggatgagttgaaggagcaacttagaagatcttatgatgtggcagataaaccaagggatatggttcccccagagaggagtaggactccacctgatccttatggtgaccggttaacttatagtctttcactgcagcagcaatatgttgtggacaagcagatgccaagatccccttacttgaactatacccatgggccggttccttttatggatcatcataacatgcatacgcagaacttttatcctcagaggaataacttgaatgtgattccggaatatgaggatccatctcagccacaaatgacaaggaggccttcccatcatccactccaatacccacaaccacaacctcatgattactttagggggcaacacatgggtttcaaccagaatccacttgcatcatatccacatgaacttgttgtacactcgcctgcatgcacttgttcaggctgctacaaccagaattgtgtggttccaccccaagttcctcatactgattttggcaacagaagtattccaaaaggtccagttaatttgaattcctatcatcatgtcaatcctgttacatacactccacataattaccccagaaatgctagtccaacaagatggcaaggtgatgttgattcagacattgatggctatggtgagagatatctaggaaagatgatcaacaggagggcacagatttcccgtcctttccgaggtggtgccccattcattacatgcttccattgtttcgagttgctgaaacttcccagaaaattcaagaagagaagtaagaatcagtcagagctacgttgtggttcctgtttgactattatttcagttgaacttaataacaaaaggctcattacatctgcatctgctcctaaagaatccaagcaatcatcttctgaggttgatcaaaattctaaggaggtattaaggggcaatgtcttaagttctcctgattgtctgaatgctgatgacaccaactcctgccatgatgatttagataactctggtcagaaccttcagttgatagtttcagaagataattcactggcagaagatgagaggctgaacttggatatatctgagaagagggaaggccatagctcttcaccttccatctcttccaaggaggaagaagacaccccagatagtatgattattcagagagacgtttctgattctgttgaacagctcgcaaaagatgcctgttctccaatagctccaggttcacctctttgggagcagcctgatagtccttccaaacatgaagtaagtaagcagcttgatagtccttccaaacatgaagtaagtgagcagcttgatagtccttccaaacatgatgtaagcagagatgggaatggaaataagagtgcatgtatagaccaagacaaggtgctctttagtaggagcacatctgcacagaaatctgtgaaagatatgtcagtggaaaccgaggtggatgattcatacaatgactatctcaataccaacatatcgcaggactctacagaggcaagcaaagaagatcgtcccaagatccgcaagggtactgataacttcttggttggtctcatcaaaaagagttttaaagattcctcgaaatctgatcaaattgtggagagaactaaggttttgatcaatgggcaacctataccagatcatctagtaaggaaagctgaaaagcttgctggcctaattcaacctggagattattggtatgacttcagagccggattctggggtgtgatgggtcacccttgccttggcataattcctccatctattgaagagttcagttacccgatgccaacaaattgtggtgccggcaatactggtgtctatgtaaacggaagagagctacatcagagagatttagacctacttgcaagcaggggactgccaactaccagagagagattttatatccttgaaatttctgggagagttgtggatgaggactctggggaagagctaaaatccctcggcagacttgccccaacaattgagaaggtaggacatggatttggcatgaaagtccccagaatggctgtgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zinc_ribbon_12

Protein Analysis

872

Amino Acids

98.47

Weight (kDa)

6.04

Isoelectric Point (pI)

57.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01440 AT4G01090
fragaria_vesca	FvH4_5g04100 FvH4_5g04100 FvH4_5g04100 FvH4_5g04100
malus_domestica	MD06G1102600.v1.1 MD06G1102800.v1.1 MD14G1121700.v1.1
prunus_persica	Prupe.5G115600_v2.0.a1 Prupe.5G115600_v2.0.a1
pyrus_communis	pycom06g09740
rosa_chinensis	RchiOBHm_Chr7g0195401
rosa_laevigata	RLG00000004123
rosa_multiflora	Rmu_sc0007366.1_g000012
rosa_roxburghii	Rroxscaffold_3G00260510
rosa_rugosa	Rorug07G0023100
rosa_samantha	Rh7AG150400 Rh7BG151900 Rh7CG155600 Rh7DG151400
rosa_wichuraiana	Rw7G012830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1277, 2384
AccIII	TCCGGA	1 cut(s)	835
AciI	CCGC	2 cut(s)	173, 2104
AclWI	GGATC	6 cut(s)	653, 726, 783, 842, 855, 2095
AcsI	RAATTY	6 cut(s)	283, 529, 1105, 1331, 1477, 2496
AcuI	CTGAAG	2 cut(s)	1568, 2272
AfaI	GTAC	3 cut(s)	73, 990, 2113
AfiI	CCNNNNNNNGG	9 cut(s)	315, 455, 639, 760, 1271, 1954, 2301, 2327, 2608
AflII	CTTAAG	1 cut(s)	1507
AgeI	ACCGGT	1 cut(s)	672
AhlI	ACTAGT	1 cut(s)	74
AjnI	CCWGG	3 cut(s)	238, 1786, 2266
Alw21I	GWGCWC	4 cut(s)	172, 504, 1962, 1976
Alw26I	GTCTC	2 cut(s)	1725, 2138
Alw44I	GTGCAC	1 cut(s)	168
AlwI	GGATC	6 cut(s)	653, 726, 783, 842, 855, 2095
Aor13HI	TCCGGA	1 cut(s)	835
AoxI	GGCC	5 cut(s)	458, 758, 875, 1660, 2254
ApaLI	GTGCAC	1 cut(s)	168
ApeKI	GCWGC	7 cut(s)	413, 697, 700, 1017, 1807, 1843, 1879
ApoI	RAATTY	6 cut(s)	283, 529, 1105, 1331, 1477, 2496
AseI	ATTAAT	1 cut(s)	123
AsiGI	ACCGGT	1 cut(s)	672
AspS9I	GGNCC	6 cut(s)	270, 355, 458, 536, 758, 1091
AsuHPI	GGTGA	7 cut(s)	509, 680, 1196, 1226, 1665, 1785, 2309
AvaII	GGWCC	4 cut(s)	270, 355, 536, 1091
BaeGI	GKGCMC	3 cut(s)	172, 1252, 1282
BamHI	GGATCC	1 cut(s)	847
BanI	GGYRCC	2 cut(s)	1277, 2384
BbsI	GAAGAC	2 cut(s)	474, 1707
Bbv12I	GWGCWC	4 cut(s)	172, 504, 1962, 1976
BbvI	GCAGC	7 cut(s)	400, 709, 712, 1004, 1819, 1855, 1891
BccI	CCATC	9 cut(s)	480, 859, 891, 1170, 1199, 1688, 1910, 2305, 2350
BciT130I	CCWGG	3 cut(s)	240, 1788, 2268
BclI	TGATCA	4 cut(s)	1236, 1471, 2170, 2199
BcoDI	GTCTC	2 cut(s)	1725, 2138
BcuI	ACTAGT	1 cut(s)	74
BfaI	CTAG	5 cut(s)	75, 476, 1164, 1226, 2228
BfmI	CTRYAG	2 cut(s)	695, 2070
BfrI	CTTAAG	1 cut(s)	1507
BglII	AGATCT	1 cut(s)	593
BisI	GCNGC	7 cut(s)	414, 698, 701, 1018, 1808, 1844, 1880
BlsI	GCNGC	7 cut(s)	415, 699, 702, 1019, 1809, 1845, 1881
BmcAI	AGTACT	1 cut(s)	73
Bme1390I	CCNGG	3 cut(s)	240, 1788, 2268
Bme18I	GGWCC	4 cut(s)	270, 355, 536, 1091
BmgT120I	GGNCC	6 cut(s)	270, 355, 458, 536, 758, 1091
BmiI	GGNNCC	8 cut(s)	459, 630, 765, 849, 1041, 1279, 1375, 2386
BmrFI	CCNGG	3 cut(s)	240, 1788, 2268
BmsI	GCATC	5 cut(s)	714, 974, 1439, 1756, 2358
BpiI	GAAGAC	2 cut(s)	474, 1707
BplI	GAGNNNNNCTC	2 cut(s)	634, 666
BpmI	CTGGAG	2 cut(s)	1770, 2289
BpuEI	CTTGAG	2 cut(s)	28, 176
BsaBI	GATNNNNATC	1 cut(s)	114
BsaI	GGTCTC	1 cut(s)	2138
BsaJI	CCNNGG	8 cut(s)	238, 617, 754, 1270, 1689, 2016, 2326, 2545
BsaWI	WCCGGW	2 cut(s)	672, 835
BsaXI	ACNNNNNCTCC	4 cut(s)	1123, 1153, 1529, 1559
Bsc4I	CCNNNNNNNGG	9 cut(s)	315, 455, 639, 760, 1271, 1954, 2301, 2327, 2608
Bse118I	RCCGGY	3 cut(s)	672, 760, 2387
Bse1I	ACTGG	5 cut(s)	60, 358, 1094, 1617, 2401
Bse3DI	GCAATG	1 cut(s)	1507
Bse8I	GATNNNNATC	1 cut(s)	114
BseAI	TCCGGA	1 cut(s)	835
BseBI	CCWGG	3 cut(s)	240, 1788, 2268
BseDI	CCNNGG	8 cut(s)	238, 617, 754, 1270, 1689, 2016, 2326, 2545
BseGI	GGATG	4 cut(s)	574, 886, 2029, 2521
BseJI	GATNNNNATC	1 cut(s)	114
BseLI	CCNNNNNNNGG	9 cut(s)	315, 455, 639, 760, 1271, 1954, 2301, 2327, 2608
BseMI	GCAATG	1 cut(s)	1507
BseMII	CTCAG	4 cut(s)	824, 869, 1455, 1638
BseNI	ACTGG	5 cut(s)	60, 358, 1094, 1617, 2401
BseRI	GAGGAG	1 cut(s)	655
BseSI	GKGCMC	3 cut(s)	172, 1252, 1282
BseXI	GCAGC	7 cut(s)	400, 709, 712, 1004, 1819, 1855, 1891
BseYI	CCCAGC	1 cut(s)	326
BsgI	GTGCAG	1 cut(s)	1965
BshFI	GGCC	5 cut(s)	460, 760, 877, 1662, 2256
BshNI	GGYRCC	2 cut(s)	1277, 2384
BshTI	ACCGGT	1 cut(s)	672
BsiHKAI	GWGCWC	4 cut(s)	172, 504, 1962, 1976
BsiSI	CCGG	5 cut(s)	673, 761, 836, 2295, 2388
BslFI	GGGAC	3 cut(s)	2079, 2472, 2585
BslI	CCNNNNNNNGG	9 cut(s)	315, 455, 639, 760, 1271, 1954, 2301, 2327, 2608
BsmAI	GTCTC	2 cut(s)	1725, 2138
BsmBI	CGTCTC	1 cut(s)	1725
BsmFI	GGGAC	3 cut(s)	2079, 2472, 2585
BsmI	GAATGC	2 cut(s)	435, 1534
BsnI	GGCC	5 cut(s)	460, 760, 877, 1662, 2256
Bso31I	GGTCTC	1 cut(s)	2138
Bsp1286I	GDGCHC	6 cut(s)	172, 504, 1252, 1282, 1962, 1976
Bsp13I	TCCGGA	1 cut(s)	835
Bsp1407I	TGTACA	1 cut(s)	988
Bsp19I	CCATGG	1 cut(s)	754
BspACI	CCGC	2 cut(s)	173, 2104
BspANI	GGCC	5 cut(s)	460, 760, 877, 1662, 2256
BspCNI	CTCAG	4 cut(s)	823, 868, 1456, 1639
BspEI	TCCGGA	1 cut(s)	835
BspHI	TCATGA	1 cut(s)	916
BspLI	GGNNCC	8 cut(s)	459, 630, 765, 849, 1041, 1279, 1375, 2386
BspMAI	CTGCAG	1 cut(s)	699
BspPI	GGATC	6 cut(s)	653, 726, 783, 842, 855, 2095
BspQI	GCTCTTC	2 cut(s)	1675, 2526
BspT107I	GGYRCC	2 cut(s)	1277, 2384
BspTI	CTTAAG	1 cut(s)	1507
BspTNI	GGTCTC	1 cut(s)	2138
BsrDI	GCAATG	1 cut(s)	1507
BsrFI	RCCGGY	3 cut(s)	672, 760, 2387
BsrGI	TGTACA	1 cut(s)	988
BsrI	ACTGG	5 cut(s)	60, 358, 1094, 1617, 2401
BssAI	RCCGGY	3 cut(s)	672, 760, 2387
BssECI	CCNNGG	8 cut(s)	238, 617, 754, 1270, 1689, 2016, 2326, 2545
BssT1I	CCWWGG	4 cut(s)	617, 754, 1689, 2326
Bst2UI	CCWGG	3 cut(s)	240, 1788, 2268
Bst6I	CTCTTC	8 cut(s)	82, 1334, 1646, 1675, 1690, 2346, 2410, 2526
BstAFI	CTTAAG	1 cut(s)	1507
BstAPI	GCANNNNNTGC	1 cut(s)	1766
BstAUI	TGTACA	1 cut(s)	988
BstC8I	GCNNGC	8 cut(s)	999, 1003, 1758, 2080, 2250, 2254, 2389, 2452
BstDEI	CTNAG	8 cut(s)	557, 587, 810, 855, 1464, 1482, 1647, 2190
BstDSI	CCRYGG	1 cut(s)	754
BstEII	GGTNACC	2 cut(s)	668, 2315
BstENI	CCTNNNNNAGG	1 cut(s)	1269
BstF5I	GGATG	4 cut(s)	574, 886, 2029, 2521
BstMAI	GTCTC	2 cut(s)	1725, 2138
BstMWI	GCNNNNNNNGC	1 cut(s)	1766
BstNI	CCWGG	3 cut(s)	240, 1788, 2268
BstNSI	RCATGY	4 cut(s)	790, 1005, 1296, 1941
BstPI	GGTNACC	2 cut(s)	668, 2315
BstSCI	CCNGG	3 cut(s)	238, 1786, 2266
BstSFI	CTRYAG	2 cut(s)	695, 2070
BstSLI	GKGCMC	3 cut(s)	172, 1252, 1282
BstV1I	GCAGC	7 cut(s)	400, 709, 712, 1004, 1819, 1855, 1891
BstV2I	GAAGAC	2 cut(s)	474, 1707
BstX2I	RGATCY	4 cut(s)	593, 731, 847, 2100
BstXI	CCANNNNNNTGG	1 cut(s)	1176
BstYI	RGATCY	4 cut(s)	593, 731, 847, 2100
BsuRI	GGCC	5 cut(s)	460, 760, 877, 1662, 2256
BtgI	CCRYGG	1 cut(s)	754
BtsCI	GGATG	4 cut(s)	574, 886, 2029, 2521
BtsI	GCAGTG	1 cut(s)	692
BtsIMutI	CAGTG	4 cut(s)	365, 692, 1610, 2013
Cac8I	GCNNGC	8 cut(s)	999, 1003, 1758, 2080, 2250, 2254, 2389, 2452
CciI	TCATGA	1 cut(s)	916
Cfr10I	RCCGGY	3 cut(s)	672, 760, 2387
Cfr13I	GGNCC	6 cut(s)	270, 355, 458, 536, 758, 1091
Csp6I	GTAC	3 cut(s)	72, 989, 2112
CspAI	ACCGGT	1 cut(s)	672
CviQI	GTAC	3 cut(s)	72, 989, 2112
DdeI	CTNAG	8 cut(s)	557, 587, 810, 855, 1464, 1482, 1647, 2190
DraI	TTTAAA	1 cut(s)	2152
Eam1104I	CTCTTC	8 cut(s)	82, 1334, 1646, 1675, 1690, 2346, 2410, 2526
EarI	CTCTTC	8 cut(s)	82, 1334, 1646, 1675, 1690, 2346, 2410, 2526
Eco130I	CCWWGG	4 cut(s)	617, 754, 1689, 2326
Eco147I	AGGCCT	1 cut(s)	877
Eco31I	GGTCTC	1 cut(s)	2138
Eco32I	GATATC	1 cut(s)	1223
Eco47I	GGWCC	4 cut(s)	270, 355, 536, 1091
Eco57I	CTGAAG	2 cut(s)	1568, 2272
Eco91I	GGTNACC	2 cut(s)	668, 2315
EcoNI	CCTNNNNNAGG	1 cut(s)	1269
EcoO109I	RGGNCCY	2 cut(s)	458, 536
EcoO65I	GGTNACC	2 cut(s)	668, 2315
EcoRI	GAATTC	1 cut(s)	1105
EcoRII	CCWGG	3 cut(s)	238, 1786, 2266
EcoRV	GATATC	1 cut(s)	1223
EcoT14I	CCWWGG	4 cut(s)	617, 754, 1689, 2326
EcoT22I	ATGCAT	1 cut(s)	792
ErhI	CCWWGG	4 cut(s)	617, 754, 1689, 2326
Esp3I	CGTCTC	1 cut(s)	1725
FalI	AAGNNNNNCTT	6 cut(s)	721, 753, 862, 894, 1946, 1978
FaqI	GGGAC	3 cut(s)	2079, 2472, 2585
FbaI	TGATCA	4 cut(s)	1236, 1471, 2170, 2199
Fnu4HI	GCNGC	7 cut(s)	414, 698, 701, 1018, 1808, 1844, 1880
FokI	GGATG	4 cut(s)	581, 873, 2036, 2528
Fsp4HI	GCNGC	7 cut(s)	414, 698, 701, 1018, 1808, 1844, 1880
FspBI	CTAG	5 cut(s)	75, 476, 1164, 1226, 2228
GluI	GCNGC	7 cut(s)	414, 698, 701, 1018, 1808, 1844, 1880
GsaI	CCCAGC	1 cut(s)	330
GsuI	CTGGAG	2 cut(s)	1770, 2289
HaeIII	GGCC	5 cut(s)	460, 760, 877, 1662, 2256
HapII	CCGG	5 cut(s)	673, 761, 836, 2295, 2388
HincII	GTYRAC	1 cut(s)	678
HindII	GTYRAC	1 cut(s)	678
HindIII	AAGCTT	1 cut(s)	2246
HpaI	GTTAAC	1 cut(s)	678
HpaII	CCGG	5 cut(s)	673, 761, 836, 2295, 2388
HphI	GGTGA	7 cut(s)	509, 680, 1196, 1226, 1665, 1785, 2309
Hpy166II	GTNNAC	6 cut(s)	170, 678, 715, 991, 1793, 2410
Hpy188III	TCNNGA	6 cut(s)	251, 476, 836, 917, 1336, 1517
Hpy8I	GTNNAC	6 cut(s)	170, 678, 715, 991, 1793, 2410
HpyCH4IV	ACGT	2 cut(s)	1366, 1734
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1766
HpyF3I	CTNAG	8 cut(s)	557, 587, 810, 855, 1464, 1482, 1647, 2190
HpySE526I	ACGT	2 cut(s)	1366, 1734
Kpn2I	TCCGGA	1 cut(s)	835
KroI	GCCGGC	1 cut(s)	2387
KroNI	GCCGGC	1 cut(s)	2389
Ksp22I	TGATCA	4 cut(s)	1236, 1471, 2170, 2199
KspAI	GTTAAC	1 cut(s)	678
LguI	GCTCTTC	2 cut(s)	1675, 2526
LmnI	GCTCC	5 cut(s)	580, 1441, 1789, 1804, 1971
Lsp1109I	GCAGC	7 cut(s)	400, 709, 712, 1004, 1819, 1855, 1891
LweI	GCATC	5 cut(s)	714, 974, 1439, 1756, 2358
MaeI	CTAG	5 cut(s)	75, 476, 1164, 1226, 2228
MaeII	ACGT	2 cut(s)	1366, 1734
MaeIII	GTNAC	4 cut(s)	668, 1129, 2315, 2360
MfeI	CAATTG	2 cut(s)	222, 2565
MflI	RGATCY	4 cut(s)	593, 731, 847, 2100
MhlI	GDGCHC	6 cut(s)	172, 504, 1252, 1282, 1962, 1976
MlyI	GAGTC	5 cut(s)	284, 488, 643, 2060, 2516
MmeI	TCCRAC	1 cut(s)	1193
Mph1103I	ATGCAT	1 cut(s)	792
MroI	TCCGGA	1 cut(s)	835
MroNI	GCCGGC	1 cut(s)	2387
MslI	CAYNNNNRTG	3 cut(s)	123, 260, 507
MspCI	CTTAAG	1 cut(s)	1507
MspI	CCGG	5 cut(s)	673, 761, 836, 2295, 2388
MspR9I	CCNGG	3 cut(s)	240, 1788, 2268
MunI	CAATTG	2 cut(s)	222, 2565
Mva1269I	GAATGC	2 cut(s)	435, 1534
MvaI	CCWGG	3 cut(s)	240, 1788, 2268
MwoI	GCNNNNNNNGC	1 cut(s)	1766
NaeI	GCCGGC	1 cut(s)	2389
NcoI	CCATGG	1 cut(s)	754
NgoMIV	GCCGGC	1 cut(s)	2387
NlaIV	GGNNCC	8 cut(s)	459, 630, 765, 849, 1041, 1279, 1375, 2386
NmeAIII	GCCGAG	2 cut(s)	442, 2526
NmuCI	GTSAC	2 cut(s)	668, 2315
NsiI	ATGCAT	1 cut(s)	792
NspI	RCATGY	4 cut(s)	790, 1005, 1296, 1941
PaeI	GCATGC	1 cut(s)	1005
PagI	TCATGA	1 cut(s)	916
PceI	AGGCCT	1 cut(s)	877
PciSI	GCTCTTC	2 cut(s)	1675, 2526
PctI	GAATGC	2 cut(s)	435, 1534
PdiI	GCCGGC	1 cut(s)	2389
PinAI	ACCGGT	1 cut(s)	672
PkrI	GCNGC	7 cut(s)	415, 699, 702, 1019, 1809, 1845, 1881
PleI	GAGTC	5 cut(s)	283, 487, 643, 2060, 2516
PpsI	GAGTC	5 cut(s)	283, 487, 643, 2060, 2516
PpuMI	RGGWCCY	1 cut(s)	536
PshBI	ATTAAT	1 cut(s)	123
Psp5II	RGGWCCY	1 cut(s)	536
Psp6I	CCWGG	3 cut(s)	238, 1786, 2266
PspEI	GGTNACC	2 cut(s)	668, 2315
PspFI	CCCAGC	1 cut(s)	326
PspGI	CCWGG	3 cut(s)	238, 1786, 2266
PspN4I	GGNNCC	8 cut(s)	459, 630, 765, 849, 1041, 1279, 1375, 2386
PspPI	GGNCC	6 cut(s)	270, 355, 458, 536, 758, 1091
PspPPI	RGGWCCY	1 cut(s)	536
PsrI	GAACNNNNNNTAC	4 cut(s)	61, 93, 972, 1004
PstI	CTGCAG	1 cut(s)	699
PsuI	RGATCY	4 cut(s)	593, 731, 847, 2100
RsaI	GTAC	3 cut(s)	73, 990, 2113
RsaNI	GTAC	3 cut(s)	72, 989, 2112
RseI	CAYNNNNRTG	3 cut(s)	123, 260, 507
SapI	GCTCTTC	2 cut(s)	1675, 2526
SatI	GCNGC	7 cut(s)	414, 698, 701, 1018, 1808, 1844, 1880
Sau96I	GGNCC	6 cut(s)	270, 355, 458, 536, 758, 1091
ScaI	AGTACT	1 cut(s)	73
SchI	GAGTC	5 cut(s)	284, 488, 643, 2060, 2516
ScrFI	CCNGG	3 cut(s)	240, 1788, 2268
SduI	GDGCHC	6 cut(s)	172, 504, 1252, 1282, 1962, 1976
SfaNI	GCATC	5 cut(s)	714, 974, 1439, 1756, 2358
SfcI	CTRYAG	2 cut(s)	695, 2070
SinI	GGWCC	4 cut(s)	270, 355, 536, 1091
SmiMI	CAYNNNNRTG	3 cut(s)	123, 260, 507
SmlI	CTYRAG	3 cut(s)	7, 155, 1507
SmoI	CTYRAG	3 cut(s)	7, 155, 1507
SpeI	ACTAGT	1 cut(s)	74
SphI	GCATGC	1 cut(s)	1005
SseBI	AGGCCT	1 cut(s)	877
SsiI	CCGC	2 cut(s)	173, 2104
SspMI	CTAG	5 cut(s)	75, 476, 1164, 1226, 2228
StuI	AGGCCT	1 cut(s)	877
StyD4I	CCNGG	3 cut(s)	238, 1786, 2266
StyI	CCWWGG	4 cut(s)	617, 754, 1689, 2326
TaiI	ACGT	2 cut(s)	1369, 1737
TaqI	TCGA	5 cut(s)	108, 205, 544, 1308, 2162
TatI	WGTACW	2 cut(s)	71, 988
TscAI	CASTG	4 cut(s)	365, 699, 1617, 2013
TseFI	GTSAC	2 cut(s)	668, 2315
TseI	GCWGC	7 cut(s)	413, 697, 700, 1017, 1807, 1843, 1879
Tsp45I	GTSAC	2 cut(s)	668, 2315
TspDTI	ATGAA	8 cut(s)	69, 278, 993, 1276, 1845, 1881, 2019, 2609
TspGWI	ACGGA	1 cut(s)	2427
TspRI	CASTG	4 cut(s)	365, 699, 1617, 2013
Vha464I	CTTAAG	1 cut(s)	1507
VneI	GTGCAC	1 cut(s)	168
VpaK11BI	GGWCC	4 cut(s)	270, 355, 536, 1091
VspI	ATTAAT	1 cut(s)	123
XagI	CCTNNNNNAGG	1 cut(s)	1269
XapI	RAATTY	6 cut(s)	283, 529, 1105, 1331, 1477, 2496
XbaI	TCTAGA	1 cut(s)	475
XceI	RCATGY	4 cut(s)	790, 1005, 1296, 1941
XspI	CTAG	5 cut(s)	75, 476, 1164, 1226, 2228
ZrmI	AGTACT	1 cut(s)	73
Zsp2I	ATGCAT	1 cut(s)	792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.