Rw7G012830

Probable zinc-ribbon domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0008950
Physical Location & Seq
Reverse (-)
12195469 .. 12199873
4405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G012830.1

Sequence Viewer

Length: 2619 bp
ATGGACTTGAGGCGAGGTAGAGGAAAAGAGAGGGTCTTTGGAGAAAGAAAGGTTGATTCCAGTAGTAGTAGTACTAGTTCATTAAGAAGAGAGAATAAAGAGGTTTTCGATGATAATCATATTAATGTTAGGGAAGGGGTTAGGGGTTTAAGGCTTGAGGAAAGTGGTGCACCGCAGAAAAAGGAGTTTGTTGAAAGATATAGTCGATTATCCGAGTTCCCAATTGATAATAGAATCCCTGGAAATGATCTTGACACGAATATGAATAGGTCCGAGTCTGTAAATTCAAGTGTAGGGGATATTTCAGCCCAATTAAGGTATCTTGCTGGGTCATTGAGATCAAGGGAAAGTATGGACCAGTGGGGTGTTGAAAGAGATCGGTATGAGGGGTTTTATGGAAACATCAGGGTTGCTGCCGAGCGAGGAAGAATGCCAATTTCTTCTTATCCTAATGAGGGGCCTTCAAATTACCATCTAGAGTCTTCTTATGGTCATGGTGAGCACAAGTATGATGTGAATGGAGTTGAAAATTTAGGACCTGATCGAGTTGAGCTTCTTAGGAAAATGGATGAGTTGAAGGAGCAACTTAGAAGATCTTATGATGTGGCAGATAAACCAAGGGATATGGTTCCCCCAGAGAGGAGTAGGACTCCACCTGATCCTTATGGTGACCGGTTAACTTATAGTCTTTCACTGCAGCAGCAATATGTTGTGGACAAGCAGATGCCAAGATCCCCTTACTTGAACTATAGCCATGGGCCGGTTCCTTTTATGGATCATCATAACATGCATACGCAGAACTTTTATCCTCAGAGGAATAACTTGAATGTGATTCCGGAATATGAGGATCCATCTCAGCCACAAATGACAAGGAGGCCTTCCCATCATCCACTCCAATACCCACAACCACAACCTCATGATTACTTTAGGGGGCAACACATGGGTTTCAACCAGAATCCACTTGCATCATATCCACATGAACTTGTTGTACACTCGCCTGCATGCACTTGTTCAGGCTGCTACAACCAGAATTGTGTGGTTCCACCCCAAGTTCCTCATACTGATTTTGGCAACAGAAGTATTCCAAAAGGTCCAGTTAATTTGAATTCCTATCATCATGTCAATCCTGTTACATACACTCCACATAATTACCCCAGAAATGCTAGTCCAACAAGATGGCAAGGTGATGTTGATTCAGACATTGATGGCTATGGTGAGAGATATCTAGGAAAGATGATCAACAGGAGGGCACAGATTTCCCATCCTTTCCGAGGTGGTGCCCCATTCATTACATGCTTCCATTGCTTCGAGTTGCTGAAACTTCCCAGAAAATTCAAGAAGAGAAGTAAGAATCAGTCAGAGCTACGTTGTGGTTCCTGTTTGACTATTATTTCAGTTGAACTTAATAACAAAAGGCTCATTACATCTGCATCTGCTCCTAAAGAATCCAAGCAATCATCTTCTGAGGTTGATCAAAATTCTAAGGAGGTATTAAGGGGCAATGTCTTAAGTTCTCCTGATTGTCTGAATGCTGATGACACCAACTCCTGCCATGATGATTTAGATAACTCTGGTCAGAACCTTCAGTTGATAGTTGCAGAAGATAATTCACTGGCAGAAGATGAGAGGCTGAACTTGGATATATCTGAGAAGAGGGAAGGCCATAGCTCTTCACCTTCCATCTCTTCCAAGGAGGAAGAAGATACCCCAGATAGTATGATTATTCAGAGAGACGTTTCTGATTCTGTTGAACAGCTCGCAAAAGATGCCTGTTCTCCAATAGCTCCAGGTTCACCTCTTTGGGAGCAGCCTGATAGTCCTTCCAAACATGAAGTAAGTGAGCAGCTTGATAGTCCTTCCAAACATGAAGTAAGTGAGCAGCTTGATAGTCCTTCCAAACATGATGTAAGCATAGATGGGAATGGAAATAAGAGTGCATGTATAGACCAAGACAAGTTGCTCTTTAGTAGGAGCACATCTGCACAGAAATCTGTGAAAGATATGTCAGTGGAAACCGAGGTGGATGATTCATACAATGACTATCTCAATACCAACATATCGCAGGACTCTACAGAGGCAAGCAAAGAAGATCGTCCCAAGATCCGCAAGGGTACTGATAACTTCTTGGTTGGTCTCATCAAAAAGAGTTTTAAAGATTCCTCGAAATCTGATCAAATTGTGGAGAGAACTAAGGTTTTGATCAATGGGCAACCTATACCAGATCATCTAGTAAGGAAAGCTGAAAAGCTTGCTGGCCCAATTCAACCTGGAGATTATTGGTATGACTTCAGAGCCGGATTCTGGGGTGTGATGGGTCACTCTTGCCTTGGCATAATTCCTCCATCTATTGAAGAGTTCAGTTACCCGATGCCAACAAATTGTGGTGCCGGCAATACTGGTGTCTATGTAAACGGAAGAGAGCTACATCAGAGAGATTTAGACCTACTTGCAAGCAGGGGACTGCCAACTACCAGAGAGAGATTTTATATCCTTGAAATTTCTGGGAGAGTTGTGGATGAGGACTCTGGGGAAGAGCTAAAATCCCTCGGCAGACTTGCCCCAACAATTGAGAAGGTAGGACATGGATTTGGCATGAAAGTCCCCAGAATGGCTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zinc_ribbon_12

Protein Analysis

872

Amino Acids

98.37

Weight (kDa)

5.89

Isoelectric Point (pI)

57.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_12 PF11331 425 - 468 1.2e-17 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1277, 2384
AccIII TCCGGA 1 cut(s) 835
AciI CCGC 2 cut(s) 173, 2104
AclWI GGATC 6 cut(s) 653, 726, 783, 842, 855, 2095
AcsI RAATTY 6 cut(s) 283, 529, 1105, 1331, 1477, 2496
AcuI CTGAAG 2 cut(s) 1568, 2272
AfaI GTAC 3 cut(s) 73, 990, 2113
AfiI CCNNNNNNNGG 7 cut(s) 315, 455, 639, 760, 1271, 2301, 2608
AflII CTTAAG 1 cut(s) 1507
AgeI ACCGGT 1 cut(s) 672
AhlI ACTAGT 1 cut(s) 74
AjnI CCWGG 3 cut(s) 238, 1786, 2266
Alw21I GWGCWC 3 cut(s) 172, 504, 1976
Alw26I GTCTC 2 cut(s) 1725, 2138
Alw44I GTGCAC 1 cut(s) 168
AlwI GGATC 6 cut(s) 653, 726, 783, 842, 855, 2095
Aor13HI TCCGGA 1 cut(s) 835
AoxI GGCC 5 cut(s) 458, 758, 875, 1660, 2254
ApaLI GTGCAC 1 cut(s) 168
ApeKI GCWGC 7 cut(s) 413, 697, 700, 1017, 1807, 1843, 1879
ApoI RAATTY 6 cut(s) 283, 529, 1105, 1331, 1477, 2496
AseI ATTAAT 1 cut(s) 123
AsiGI ACCGGT 1 cut(s) 672
AspS9I GGNCC 7 cut(s) 270, 355, 458, 536, 758, 1091, 2255
AsuHPI GGTGA 6 cut(s) 509, 680, 1196, 1226, 1665, 1785
AvaII GGWCC 4 cut(s) 270, 355, 536, 1091
BaeGI GKGCMC 3 cut(s) 172, 1252, 1282
BamHI GGATCC 1 cut(s) 847
BanI GGYRCC 2 cut(s) 1277, 2384
BbsI GAAGAC 1 cut(s) 474
Bbv12I GWGCWC 3 cut(s) 172, 504, 1976
BbvI GCAGC 7 cut(s) 400, 709, 712, 1004, 1819, 1855, 1891
BciT130I CCWGG 3 cut(s) 240, 1788, 2268
BclI TGATCA 4 cut(s) 1236, 1471, 2170, 2199
BcoDI GTCTC 2 cut(s) 1725, 2138
BcuI ACTAGT 1 cut(s) 74
BfaI CTAG 5 cut(s) 75, 476, 1164, 1226, 2228
BfmI CTRYAG 3 cut(s) 695, 748, 2070
BfrI CTTAAG 1 cut(s) 1507
BglII AGATCT 1 cut(s) 593
BisI GCNGC 7 cut(s) 414, 698, 701, 1018, 1808, 1844, 1880
BlsI GCNGC 7 cut(s) 415, 699, 702, 1019, 1809, 1845, 1881
BmcAI AGTACT 1 cut(s) 73
Bme1390I CCNGG 3 cut(s) 240, 1788, 2268
Bme18I GGWCC 4 cut(s) 270, 355, 536, 1091
BmgT120I GGNCC 7 cut(s) 270, 355, 458, 536, 758, 1091, 2255
BmiI GGNNCC 8 cut(s) 459, 630, 765, 849, 1041, 1279, 1375, 2386
BmrFI CCNGG 3 cut(s) 240, 1788, 2268
BmsI GCATC 5 cut(s) 714, 974, 1439, 1756, 2358
BpiI GAAGAC 1 cut(s) 474
BplI GAGNNNNNCTC 2 cut(s) 634, 666
BpmI CTGGAG 2 cut(s) 1770, 2289
BpuEI CTTGAG 2 cut(s) 28, 176
BsaBI GATNNNNATC 1 cut(s) 114
BsaI GGTCTC 1 cut(s) 2138
BsaJI CCNNGG 8 cut(s) 238, 617, 754, 1270, 1689, 2016, 2326, 2545
BsaWI WCCGGW 2 cut(s) 672, 835
BsaXI ACNNNNNCTCC 4 cut(s) 1123, 1153, 1529, 1559
Bsc4I CCNNNNNNNGG 7 cut(s) 315, 455, 639, 760, 1271, 2301, 2608
Bse118I RCCGGY 3 cut(s) 672, 760, 2387
Bse1I ACTGG 5 cut(s) 60, 358, 1094, 1617, 2401
Bse3DI GCAATG 2 cut(s) 1300, 1507
Bse8I GATNNNNATC 1 cut(s) 114
BseAI TCCGGA 1 cut(s) 835
BseBI CCWGG 3 cut(s) 240, 1788, 2268
BseDI CCNNGG 8 cut(s) 238, 617, 754, 1270, 1689, 2016, 2326, 2545
BseGI GGATG 5 cut(s) 574, 886, 1261, 2029, 2521
BseJI GATNNNNATC 1 cut(s) 114
BseLI CCNNNNNNNGG 7 cut(s) 315, 455, 639, 760, 1271, 2301, 2608
BseMI GCAATG 2 cut(s) 1300, 1507
BseMII CTCAG 4 cut(s) 824, 869, 1455, 1638
BseNI ACTGG 5 cut(s) 60, 358, 1094, 1617, 2401
BseRI GAGGAG 1 cut(s) 655
BseSI GKGCMC 3 cut(s) 172, 1252, 1282
BseXI GCAGC 7 cut(s) 400, 709, 712, 1004, 1819, 1855, 1891
BseYI CCCAGC 1 cut(s) 326
BsgI GTGCAG 1 cut(s) 1965
BshFI GGCC 5 cut(s) 460, 760, 877, 1662, 2256
BshNI GGYRCC 2 cut(s) 1277, 2384
BshTI ACCGGT 1 cut(s) 672
BsiHKAI GWGCWC 3 cut(s) 172, 504, 1976
BsiSI CCGG 5 cut(s) 673, 761, 836, 2295, 2388
BslFI GGGAC 3 cut(s) 2079, 2472, 2585
BslI CCNNNNNNNGG 7 cut(s) 315, 455, 639, 760, 1271, 2301, 2608
BsmAI GTCTC 2 cut(s) 1725, 2138
BsmBI CGTCTC 1 cut(s) 1725
BsmFI GGGAC 3 cut(s) 2079, 2472, 2585
BsmI GAATGC 2 cut(s) 435, 1534
BsnI GGCC 5 cut(s) 460, 760, 877, 1662, 2256
Bso31I GGTCTC 1 cut(s) 2138
Bsp1286I GDGCHC 5 cut(s) 172, 504, 1252, 1282, 1976
Bsp13I TCCGGA 1 cut(s) 835
Bsp1407I TGTACA 1 cut(s) 988
Bsp19I CCATGG 1 cut(s) 754
BspACI CCGC 2 cut(s) 173, 2104
BspANI GGCC 5 cut(s) 460, 760, 877, 1662, 2256
BspCNI CTCAG 4 cut(s) 823, 868, 1456, 1639
BspEI TCCGGA 1 cut(s) 835
BspHI TCATGA 1 cut(s) 916
BspLI GGNNCC 8 cut(s) 459, 630, 765, 849, 1041, 1279, 1375, 2386
BspMAI CTGCAG 1 cut(s) 699
BspPI GGATC 6 cut(s) 653, 726, 783, 842, 855, 2095
BspQI GCTCTTC 2 cut(s) 1675, 2526
BspT107I GGYRCC 2 cut(s) 1277, 2384
BspTI CTTAAG 1 cut(s) 1507
BspTNI GGTCTC 1 cut(s) 2138
BsrDI GCAATG 2 cut(s) 1300, 1507
BsrFI RCCGGY 3 cut(s) 672, 760, 2387
BsrGI TGTACA 1 cut(s) 988
BsrI ACTGG 5 cut(s) 60, 358, 1094, 1617, 2401
BssAI RCCGGY 3 cut(s) 672, 760, 2387
BssECI CCNNGG 8 cut(s) 238, 617, 754, 1270, 1689, 2016, 2326, 2545
BssT1I CCWWGG 4 cut(s) 617, 754, 1689, 2326
Bst2UI CCWGG 3 cut(s) 240, 1788, 2268
Bst6I CTCTTC 8 cut(s) 82, 1334, 1646, 1675, 1690, 2346, 2410, 2526
BstAFI CTTAAG 1 cut(s) 1507
BstAPI GCANNNNNTGC 1 cut(s) 1766
BstAUI TGTACA 1 cut(s) 988
BstC8I GCNNGC 8 cut(s) 999, 1003, 1758, 2080, 2250, 2254, 2389, 2452
BstDEI CTNAG 8 cut(s) 557, 587, 810, 855, 1464, 1482, 1647, 2190
BstDSI CCRYGG 1 cut(s) 754
BstEII GGTNACC 1 cut(s) 668
BstENI CCTNNNNNAGG 1 cut(s) 1269
BstF5I GGATG 5 cut(s) 574, 886, 1261, 2029, 2521
BstMAI GTCTC 2 cut(s) 1725, 2138
BstMWI GCNNNNNNNGC 2 cut(s) 1302, 1766
BstNI CCWGG 3 cut(s) 240, 1788, 2268
BstNSI RCATGY 4 cut(s) 790, 1005, 1296, 1941
BstPI GGTNACC 1 cut(s) 668
BstSCI CCNGG 3 cut(s) 238, 1786, 2266
BstSFI CTRYAG 3 cut(s) 695, 748, 2070
BstSLI GKGCMC 3 cut(s) 172, 1252, 1282
BstV1I GCAGC 7 cut(s) 400, 709, 712, 1004, 1819, 1855, 1891
BstV2I GAAGAC 1 cut(s) 474
BstX2I RGATCY 4 cut(s) 593, 731, 847, 2100
BstXI CCANNNNNNTGG 1 cut(s) 1176
BstYI RGATCY 4 cut(s) 593, 731, 847, 2100
BsuRI GGCC 5 cut(s) 460, 760, 877, 1662, 2256
BtgI CCRYGG 1 cut(s) 754
BtsCI GGATG 5 cut(s) 574, 886, 1261, 2029, 2521
BtsI GCAGTG 1 cut(s) 692
BtsIMutI CAGTG 4 cut(s) 365, 692, 1610, 2013
Cac8I GCNNGC 8 cut(s) 999, 1003, 1758, 2080, 2250, 2254, 2389, 2452
CciI TCATGA 1 cut(s) 916
Cfr10I RCCGGY 3 cut(s) 672, 760, 2387
Cfr13I GGNCC 7 cut(s) 270, 355, 458, 536, 758, 1091, 2255
Csp6I GTAC 3 cut(s) 72, 989, 2112
CspAI ACCGGT 1 cut(s) 672
CviQI GTAC 3 cut(s) 72, 989, 2112
DdeI CTNAG 8 cut(s) 557, 587, 810, 855, 1464, 1482, 1647, 2190
DraI TTTAAA 1 cut(s) 2152
Eam1104I CTCTTC 8 cut(s) 82, 1334, 1646, 1675, 1690, 2346, 2410, 2526
EarI CTCTTC 8 cut(s) 82, 1334, 1646, 1675, 1690, 2346, 2410, 2526
Eco130I CCWWGG 4 cut(s) 617, 754, 1689, 2326
Eco147I AGGCCT 1 cut(s) 877
Eco31I GGTCTC 1 cut(s) 2138
Eco32I GATATC 1 cut(s) 1223
Eco47I GGWCC 4 cut(s) 270, 355, 536, 1091
Eco57I CTGAAG 2 cut(s) 1568, 2272
Eco91I GGTNACC 1 cut(s) 668
EcoNI CCTNNNNNAGG 1 cut(s) 1269
EcoO109I RGGNCCY 2 cut(s) 458, 536
EcoO65I GGTNACC 1 cut(s) 668
EcoRI GAATTC 1 cut(s) 1105
EcoRII CCWGG 3 cut(s) 238, 1786, 2266
EcoRV GATATC 1 cut(s) 1223
EcoT14I CCWWGG 4 cut(s) 617, 754, 1689, 2326
EcoT22I ATGCAT 1 cut(s) 792
ErhI CCWWGG 4 cut(s) 617, 754, 1689, 2326
Esp3I CGTCTC 1 cut(s) 1725
FalI AAGNNNNNCTT 6 cut(s) 721, 753, 862, 894, 1946, 1978
FaqI GGGAC 3 cut(s) 2079, 2472, 2585
FbaI TGATCA 4 cut(s) 1236, 1471, 2170, 2199
Fnu4HI GCNGC 7 cut(s) 414, 698, 701, 1018, 1808, 1844, 1880
FokI GGATG 5 cut(s) 581, 873, 1248, 2036, 2528
Fsp4HI GCNGC 7 cut(s) 414, 698, 701, 1018, 1808, 1844, 1880
FspBI CTAG 5 cut(s) 75, 476, 1164, 1226, 2228
GluI GCNGC 7 cut(s) 414, 698, 701, 1018, 1808, 1844, 1880
GsaI CCCAGC 1 cut(s) 330
GsuI CTGGAG 2 cut(s) 1770, 2289
HaeIII GGCC 5 cut(s) 460, 760, 877, 1662, 2256
HapII CCGG 5 cut(s) 673, 761, 836, 2295, 2388
HincII GTYRAC 1 cut(s) 678
HindII GTYRAC 1 cut(s) 678
HindIII AAGCTT 1 cut(s) 2246
HpaI GTTAAC 1 cut(s) 678
HpaII CCGG 5 cut(s) 673, 761, 836, 2295, 2388
HphI GGTGA 6 cut(s) 509, 680, 1196, 1226, 1665, 1785
Hpy166II GTNNAC 6 cut(s) 170, 678, 715, 991, 1793, 2410
Hpy188III TCNNGA 6 cut(s) 251, 476, 836, 917, 1336, 1517
Hpy8I GTNNAC 6 cut(s) 170, 678, 715, 991, 1793, 2410
HpyCH4IV ACGT 2 cut(s) 1366, 1734
HpyF10VI GCNNNNNNNGC 2 cut(s) 1302, 1766
HpyF3I CTNAG 8 cut(s) 557, 587, 810, 855, 1464, 1482, 1647, 2190
HpySE526I ACGT 2 cut(s) 1366, 1734
Kpn2I TCCGGA 1 cut(s) 835
KroI GCCGGC 1 cut(s) 2387
KroNI GCCGGC 1 cut(s) 2389
Ksp22I TGATCA 4 cut(s) 1236, 1471, 2170, 2199
KspAI GTTAAC 1 cut(s) 678
LguI GCTCTTC 2 cut(s) 1675, 2526
LmnI GCTCC 5 cut(s) 580, 1441, 1789, 1804, 1971
Lsp1109I GCAGC 7 cut(s) 400, 709, 712, 1004, 1819, 1855, 1891
LweI GCATC 5 cut(s) 714, 974, 1439, 1756, 2358
MaeI CTAG 5 cut(s) 75, 476, 1164, 1226, 2228
MaeII ACGT 2 cut(s) 1366, 1734
MaeIII GTNAC 4 cut(s) 668, 1129, 2315, 2360
MfeI CAATTG 2 cut(s) 222, 2565
MflI RGATCY 4 cut(s) 593, 731, 847, 2100
MhlI GDGCHC 5 cut(s) 172, 504, 1252, 1282, 1976
MlyI GAGTC 5 cut(s) 284, 488, 643, 2060, 2516
MmeI TCCRAC 1 cut(s) 1193
Mph1103I ATGCAT 1 cut(s) 792
MroI TCCGGA 1 cut(s) 835
MroNI GCCGGC 1 cut(s) 2387
MslI CAYNNNNRTG 3 cut(s) 123, 260, 507
MspCI CTTAAG 1 cut(s) 1507
MspI CCGG 5 cut(s) 673, 761, 836, 2295, 2388
MspR9I CCNGG 3 cut(s) 240, 1788, 2268
MunI CAATTG 2 cut(s) 222, 2565
Mva1269I GAATGC 2 cut(s) 435, 1534
MvaI CCWGG 3 cut(s) 240, 1788, 2268
MwoI GCNNNNNNNGC 2 cut(s) 1302, 1766
NaeI GCCGGC 1 cut(s) 2389
NcoI CCATGG 1 cut(s) 754
NgoMIV GCCGGC 1 cut(s) 2387
NlaIV GGNNCC 8 cut(s) 459, 630, 765, 849, 1041, 1279, 1375, 2386
NmeAIII GCCGAG 2 cut(s) 442, 2526
NmuCI GTSAC 2 cut(s) 668, 2315
NsiI ATGCAT 1 cut(s) 792
NspI RCATGY 4 cut(s) 790, 1005, 1296, 1941
PaeI GCATGC 1 cut(s) 1005
PagI TCATGA 1 cut(s) 916
PceI AGGCCT 1 cut(s) 877
PciSI GCTCTTC 2 cut(s) 1675, 2526
PctI GAATGC 2 cut(s) 435, 1534
PdiI GCCGGC 1 cut(s) 2389
PinAI ACCGGT 1 cut(s) 672
PkrI GCNGC 7 cut(s) 415, 699, 702, 1019, 1809, 1845, 1881
PleI GAGTC 5 cut(s) 283, 487, 643, 2060, 2516
PpsI GAGTC 5 cut(s) 283, 487, 643, 2060, 2516
PpuMI RGGWCCY 1 cut(s) 536
PshBI ATTAAT 1 cut(s) 123
Psp5II RGGWCCY 1 cut(s) 536
Psp6I CCWGG 3 cut(s) 238, 1786, 2266
PspEI GGTNACC 1 cut(s) 668
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 3 cut(s) 238, 1786, 2266
PspN4I GGNNCC 8 cut(s) 459, 630, 765, 849, 1041, 1279, 1375, 2386
PspPI GGNCC 7 cut(s) 270, 355, 458, 536, 758, 1091, 2255
PspPPI RGGWCCY 1 cut(s) 536
PsrI GAACNNNNNNTAC 4 cut(s) 61, 93, 972, 1004
PstI CTGCAG 1 cut(s) 699
PsuI RGATCY 4 cut(s) 593, 731, 847, 2100
RsaI GTAC 3 cut(s) 73, 990, 2113
RsaNI GTAC 3 cut(s) 72, 989, 2112
RseI CAYNNNNRTG 3 cut(s) 123, 260, 507
SapI GCTCTTC 2 cut(s) 1675, 2526
SatI GCNGC 7 cut(s) 414, 698, 701, 1018, 1808, 1844, 1880
Sau96I GGNCC 7 cut(s) 270, 355, 458, 536, 758, 1091, 2255
ScaI AGTACT 1 cut(s) 73
SchI GAGTC 5 cut(s) 284, 488, 643, 2060, 2516
ScrFI CCNGG 3 cut(s) 240, 1788, 2268
SduI GDGCHC 5 cut(s) 172, 504, 1252, 1282, 1976
SfaNI GCATC 5 cut(s) 714, 974, 1439, 1756, 2358
SfcI CTRYAG 3 cut(s) 695, 748, 2070
SinI GGWCC 4 cut(s) 270, 355, 536, 1091
SmiMI CAYNNNNRTG 3 cut(s) 123, 260, 507
SmlI CTYRAG 3 cut(s) 7, 155, 1507
SmoI CTYRAG 3 cut(s) 7, 155, 1507
SpeI ACTAGT 1 cut(s) 74
SphI GCATGC 1 cut(s) 1005
SseBI AGGCCT 1 cut(s) 877
SsiI CCGC 2 cut(s) 173, 2104
SspMI CTAG 5 cut(s) 75, 476, 1164, 1226, 2228
StuI AGGCCT 1 cut(s) 877
StyD4I CCNGG 3 cut(s) 238, 1786, 2266
StyI CCWWGG 4 cut(s) 617, 754, 1689, 2326
TaiI ACGT 2 cut(s) 1369, 1737
TaqI TCGA 5 cut(s) 108, 205, 544, 1308, 2162
TatI WGTACW 2 cut(s) 71, 988
TscAI CASTG 4 cut(s) 365, 699, 1617, 2013
TseFI GTSAC 2 cut(s) 668, 2315
TseI GCWGC 7 cut(s) 413, 697, 700, 1017, 1807, 1843, 1879
Tsp45I GTSAC 2 cut(s) 668, 2315
TspDTI ATGAA 8 cut(s) 69, 278, 993, 1276, 1845, 1881, 2019, 2609
TspGWI ACGGA 1 cut(s) 2427
TspRI CASTG 4 cut(s) 365, 699, 1617, 2013
Vha464I CTTAAG 1 cut(s) 1507
VneI GTGCAC 1 cut(s) 168
VpaK11BI GGWCC 4 cut(s) 270, 355, 536, 1091
VspI ATTAAT 1 cut(s) 123
XagI CCTNNNNNAGG 1 cut(s) 1269
XapI RAATTY 6 cut(s) 283, 529, 1105, 1331, 1477, 2496
XbaI TCTAGA 1 cut(s) 475
XceI RCATGY 4 cut(s) 790, 1005, 1296, 1941
XspI CTAG 5 cut(s) 75, 476, 1164, 1226, 2228
ZrmI AGTACT 1 cut(s) 73
Zsp2I ATGCAT 1 cut(s) 792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.