AT4G01090

Probable zinc-ribbon domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0008950
Physical Location & Seq
Reverse (-)
470506 .. 473879
3374 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G01090.1

Sequence Viewer

Length: 2145 bp
ATGAGGTCGCGAGGCGATGTCTCTGAAGCAGAAGGTACGAGATCAGATGCTGGTTCTTCAAGAAGCGAAGAAGAAACGAGTCTGAAGGAGAAACACTCAAATTCGCGAGCTGGGTCTCAAAGATCTGGAAAAAGCTTGAGAAATGACGAGCCTAATTACGGATCAGATTCTTCATCTAAGAACACAAGCAGCAGCAACAACCCTATTGAGTATACAGAGCATGAACGAGCTGAGCTTTTAAGAAGGTTAGATTCTATCAAAGATCATCTACTTCGCGGTGGTGGTGGTGGTAATAATGTAGTTGATAAACCTAAAGAACCAGATCAGAATCAGCCTTTCCTTAGACCAGTTCATCTTCATGGTCATGCTAATCATAATCCTGGTCCTTCTTATTACCATCAGTATCCAGAACCTATTCAATACCCTGGACCGGTTCATGGAATGTATCCTCAAGCTTATCAAGATCCTTATGGGTACCAAAGAAGACCACCTCCAGTTCCTAATCCAAACTGGTATCCTCCTGGTCATTACCCTAATCAGATGGCTCGTCAGTATCCTGGAGGTCAATATGTTGAACTTGGTCCTGATATAGTTGAGCCACATTCTTACTATCCAGCTACTCCTGGTAGGTACGGTGACCTGCCTCCGTATAGCCCGGTTTCGTCTCACCATCGTGAAGAGAAACTCGCTACACAGTACAGTGATATGCCTCCGTATAGCCCGGTTTCGTCTCACCATCGTGGCGAGAAACTCACGACACCGTATAGTCCACGTGTTAATAACGGTTCGAGTTTTCCTTCTTCGATGGGCACTCCAGGTCCTCGAGGTGGTTATGCAAGGTGGCCGAGTGAACATGATTCTGAAATGGGCGGTGCTTTTGCTCGTGGGTATGTTAAGAAAGCTGTATCGGATACTGGTGTTCGACGTTGTCATCCTCTTGCTGGTGGTGCTCCTTTTATAGCTTGTCATAGTTGCTTTGAGCTGCTTTACTTGCCTAAGAAGAAGCTTTTGTCTCAGGAAAGGTTACATAAGCTGCAGTGCGGTGCTTGTTCTGAAGTTATTAGTTTCACAATCGTTGATAGGAAACTCGTTTTCTCTTCTGGTAATGAGGAAACAAAACCGGTCTCTCTAGAGGTTGAAGATAGAAACACAACAAACACAGTAGTGATAGAGGAGGAAGTCTCTTCTGTTGATTTCAACAGCTCAGGTAGAGATATTCCACGTAAGGATGAAGAAGAACCAGTGCAAGAACTGAGAAATCATCAGGATACTATTACTACGCAAAGCGTCCGCTCTGAATCTCAACACTCAGATGATGAAGAAAGATCGAGCAATTCTAGTGAACAACAACAGAAGGAGGTCAAATCTGTTCGTCGGCGAGGTAAAGGGTCAAAAGCACCTGAACCCGCTGCTCCTGATAATGCCAGTCTCCTTGAACTTTTTGAGTATTCTAATGTAAACAGAGCTGCACTCGCTTATGGAATGGCGCAGTTAGGTTATGAAAAGCCAGATAAGCAAAAGTCTTTCATGACACAGGACTCGCTGAAACCAGAATCAGTAGCTACAGAGACAGAGGTTTCTTACAATGGATACTCTAACACCGAGATCTCAGAAGATTCAAGGTACTCAAACAGAAAGGGTAGTGAGTACGGTTCGACAGAGATCACAACGAGGTCCTCTACTGATCAAAACGAAGACCAGATGAAGTCATTAGAGGTTTGGGTTAATGGACATCTTATACCAGAAGATCTTGTTAGCAGTGCTGAGAAATTAGCTGGACCAATCCAAGCTGGAAAGTATTGGTATGATTACCGAGCTGGGTTCTGGGGAGTGATGGGCAAACCGTGTCTCGGTATAATACCTCCATTTATTGAAGAGTTTAGCCATCCAATGCTGGATAACTGCGCTGCAGGAAACACAGACGTGTTTGTGAATGGAAGAGAGCTTCACAAGAGAGATTTCGAGTTACTTGTGGGTCGTGGTCTGCCTAGAGACAAGAACCGTTCTTACATTGTTGATATATCAGGAAGAATCCTTGATCAAGATTCAGGAGAAGAACTTCACAGCCTTGGCAAATTAGCCCCAACGATTGAGAAAGTGAAGCATGGATTTGGTATGAGAGTTCCAAGATCATTAGCTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zinc_ribbon_12

Protein Analysis

714

Amino Acids

79.56

Weight (kDa)

6.03

Isoelectric Point (pI)

56.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_12 PF11331 314 - 358 1.1e-21 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 822
Acc36I ACCTGC 1 cut(s) 648
Acc65I GGTACC 1 cut(s) 474
AccB1I GGYRCC 1 cut(s) 474
AccBSI CCGCTC 1 cut(s) 1293
AccI GTMKAC 1 cut(s) 212
AccII CGCG 3 cut(s) 10, 106, 276
AciI CCGC 5 cut(s) 276, 870, 1041, 1291, 1407
AclWI GGATC 2 cut(s) 169, 458
AcoI YGGCCR 1 cut(s) 842
AcsI RAATTY 1 cut(s) 100
AcuI CTGAAG 3 cut(s) 45, 104, 1074
AcvI CACGTG 1 cut(s) 773
AfaI GTAC 6 cut(s) 37, 476, 632, 698, 1625, 1649
AfiI CCNNNNNNNGG 6 cut(s) 158, 430, 437, 827, 941, 1850
AflIII ACRYGT 2 cut(s) 772, 1923
AgeI ACCGGT 2 cut(s) 430, 1120
AgsI TTSAA 8 cut(s) 60, 419, 575, 1139, 1198, 1436, 1620, 1874
AjiI CACGTC 1 cut(s) 1924
AjnI CCWGG 6 cut(s) 379, 424, 520, 556, 622, 814
AleI CACNNNNGTG 4 cut(s) 672, 738, 1163, 1922
Alw21I GWGCWC 1 cut(s) 952
AlwI GGATC 2 cut(s) 169, 458
AlwNI CAGNNNCTG 1 cut(s) 50
Ama87I CYCGRG 1 cut(s) 822
AoxI GGCC 1 cut(s) 842
ApeKI GCWGC 7 cut(s) 189, 192, 982, 1033, 1409, 1466, 1907
ApoI RAATTY 1 cut(s) 100
AsiGI ACCGGT 2 cut(s) 430, 1120
Asp700I GAANNNNTTC 2 cut(s) 414, 2058
Asp718I GGTACC 1 cut(s) 474
AspLEI GCGC 2 cut(s) 1489, 1907
AspS9I GGNCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
AsuC2I CCSGG 2 cut(s) 656, 722
AsuHPI GGTGA 3 cut(s) 647, 659, 725
AvaI CYCGRG 1 cut(s) 822
AvaII GGWCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
BaeGI GKGCMC 1 cut(s) 812
BaeI ACNNNNGTAYC 2 cut(s) 903, 936
BanI GGYRCC 1 cut(s) 474
BauI CACGAG 1 cut(s) 882
BbrPI CACGTG 1 cut(s) 773
BbsI GAAGAC 2 cut(s) 490, 1701
Bbv12I GWGCWC 1 cut(s) 952
BbvI GCAGC 7 cut(s) 201, 204, 969, 1020, 1396, 1453, 1894
BccI CCATC 7 cut(s) 405, 535, 678, 744, 799, 1828, 1893
BciT130I CCWGG 6 cut(s) 381, 426, 522, 558, 624, 816
BciVI GTATCC 7 cut(s) 414, 456, 525, 564, 904, 1261, 1583
BclI TGATCA 2 cut(s) 1684, 2038
BcnI CCSGG 2 cut(s) 656, 722
BfaI CTAG 3 cut(s) 1130, 1338, 1989
BfmI CTRYAG 3 cut(s) 1034, 1563, 1908
BfuAI ACCTGC 1 cut(s) 648
BfuI GTATCC 7 cut(s) 414, 456, 525, 564, 904, 1261, 1583
BglII AGATCT 3 cut(s) 122, 1605, 1747
BisI GCNGC 7 cut(s) 190, 193, 983, 1034, 1410, 1467, 1908
BlpI GCTNAGC 1 cut(s) 231
BlsI GCNGC 7 cut(s) 191, 194, 984, 1035, 1411, 1468, 1909
Bme1390I CCNGG 8 cut(s) 381, 426, 522, 558, 624, 656, 722, 816
Bme18I GGWCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
BmeT110I CYCGRG 1 cut(s) 822
BmgBI CACGTC 1 cut(s) 1924
BmgT120I GGNCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
BmiI GGNNCC 1 cut(s) 476
BmrFI CCNGG 8 cut(s) 381, 426, 522, 558, 624, 656, 722, 816
BmsI GCATC 1 cut(s) 37
BpiI GAAGAC 2 cut(s) 490, 1701
BplI GAGNNNNNCTC 6 cut(s) 80, 112, 1166, 1198, 1455, 1487
BpmI CTGGAG 3 cut(s) 477, 579, 798
Bpu10I CCTNAGC 1 cut(s) 1204
Bpu1102I GCTNAGC 1 cut(s) 231
BpuEI CTTGAG 2 cut(s) 157, 435
BpuMI CCSGG 2 cut(s) 656, 722
BsaAI YACGTR 2 cut(s) 773, 1223
BsaBI GATNNNNATC 1 cut(s) 327
BsaI GGTCTC 2 cut(s) 120, 1129
BsaJI CCNNGG 2 cut(s) 424, 2068
BsaWI WCCGGW 2 cut(s) 430, 1120
Bsc4I CCNNNNNNNGG 6 cut(s) 158, 430, 437, 827, 941, 1850
Bse118I RCCGGY 2 cut(s) 430, 1120
Bse1I ACTGG 6 cut(s) 347, 494, 515, 919, 1241, 1425
Bse8I GATNNNNATC 1 cut(s) 327
BseBI CCWGG 6 cut(s) 381, 426, 522, 558, 624, 816
BseDI CCNNGG 2 cut(s) 424, 2068
BseGI GGATG 3 cut(s) 931, 1234, 1885
BseJI GATNNNNATC 1 cut(s) 327
BseLI CCNNNNNNNGG 6 cut(s) 158, 430, 437, 827, 941, 1850
BseMII CTCAG 7 cut(s) 222, 1028, 1218, 1244, 1323, 1623, 1755
BseNI ACTGG 6 cut(s) 347, 494, 515, 919, 1241, 1425
BseRI GAGGAG 1 cut(s) 1187
BseSI GKGCMC 1 cut(s) 812
BseXI GCAGC 7 cut(s) 201, 204, 969, 1020, 1396, 1453, 1894
BseYI CCCAGC 2 cut(s) 110, 1817
BsgI GTGCAG 1 cut(s) 1452
Bsh1236I CGCG 3 cut(s) 10, 106, 276
BshFI GGCC 1 cut(s) 844
BshNI GGYRCC 1 cut(s) 474
BshTI ACCGGT 2 cut(s) 430, 1120
BsiHKAI GWGCWC 1 cut(s) 952
BsiHKCI CYCGRG 1 cut(s) 822
BsiSI CCGG 4 cut(s) 431, 656, 722, 1121
BslI CCNNNNNNNGG 6 cut(s) 158, 430, 437, 827, 941, 1850
BsmBI CGTCTC 2 cut(s) 669, 735
BsnI GGCC 1 cut(s) 844
Bso31I GGTCTC 2 cut(s) 120, 1129
BsoBI CYCGRG 1 cut(s) 822
Bsp1286I GDGCHC 2 cut(s) 812, 952
Bsp1720I GCTNAGC 1 cut(s) 231
Bsp68I TCGCGA 2 cut(s) 10, 106
BspACI CCGC 5 cut(s) 276, 870, 1041, 1291, 1407
BspANI GGCC 1 cut(s) 844
BspCNI CTCAG 7 cut(s) 223, 1027, 1217, 1245, 1322, 1622, 1756
BspFNI CGCG 3 cut(s) 10, 106, 276
BspHI TCATGA 2 cut(s) 1527, 2141
BspLI GGNNCC 1 cut(s) 476
BspMAI CTGCAG 2 cut(s) 1038, 1912
BspMI ACCTGC 1 cut(s) 648
BspPI GGATC 2 cut(s) 169, 458
BspT107I GGYRCC 1 cut(s) 474
BspTNI GGTCTC 2 cut(s) 120, 1129
BsrBI CCGCTC 1 cut(s) 1293
BsrFI RCCGGY 2 cut(s) 430, 1120
BsrI ACTGG 6 cut(s) 347, 494, 515, 919, 1241, 1425
BssAI RCCGGY 2 cut(s) 430, 1120
BssECI CCNNGG 2 cut(s) 424, 2068
BssNAI GTATAC 1 cut(s) 213
BssSI CACGAG 1 cut(s) 882
BssT1I CCWWGG 1 cut(s) 2068
Bst1107I GTATAC 1 cut(s) 213
Bst2BI CACGAG 1 cut(s) 882
Bst2UI CCWGG 6 cut(s) 381, 426, 522, 558, 624, 816
Bst4CI ACNGT 9 cut(s) 635, 696, 701, 762, 785, 1162, 1652, 1845, 2003
Bst6I CTCTTC 5 cut(s) 672, 1102, 1189, 1869, 1933
BstBAI YACGTR 2 cut(s) 773, 1223
BstC8I GCNNGC 1 cut(s) 108
BstEII GGTNACC 1 cut(s) 635
BstF5I GGATG 3 cut(s) 931, 1234, 1885
BstFNI CGCG 3 cut(s) 10, 106, 276
BstHHI GCGC 2 cut(s) 1489, 1907
BstMWI GCNNNNNNNGC 4 cut(s) 947, 991, 1472, 1513
BstNI CCWGG 6 cut(s) 381, 426, 522, 558, 624, 816
BstPI GGTNACC 1 cut(s) 635
BstSCI CCNGG 8 cut(s) 379, 424, 520, 556, 622, 654, 720, 814
BstSFI CTRYAG 3 cut(s) 1034, 1563, 1908
BstSLI GKGCMC 1 cut(s) 812
BstUI CGCG 3 cut(s) 10, 106, 276
BstV1I GCAGC 7 cut(s) 201, 204, 969, 1020, 1396, 1453, 1894
BstV2I GAAGAC 2 cut(s) 490, 1701
BstX2I RGATCY 4 cut(s) 122, 463, 1605, 1747
BstYI RGATCY 4 cut(s) 122, 463, 1605, 1747
BstZ17I GTATAC 1 cut(s) 213
BsuI GTATCC 7 cut(s) 414, 456, 525, 564, 904, 1261, 1583
BsuRI GGCC 1 cut(s) 844
BtgZI GCGATG 1 cut(s) 30
BtrI CACGTC 1 cut(s) 1924
BtsCI GGATG 3 cut(s) 931, 1234, 1885
BtsI GCAGTG 2 cut(s) 1043, 1765
BtsIMutI CAGTG 4 cut(s) 706, 1043, 1248, 1765
BtuMI TCGCGA 2 cut(s) 10, 106
BveI ACCTGC 1 cut(s) 648
Cac8I GCNNGC 1 cut(s) 108
CaiI CAGNNNCTG 1 cut(s) 50
CciI TCATGA 2 cut(s) 1527, 2141
CfoI GCGC 2 cut(s) 1489, 1907
Cfr10I RCCGGY 2 cut(s) 430, 1120
Cfr13I GGNCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
CseI GACGC 1 cut(s) 1276
Csp6I GTAC 6 cut(s) 36, 475, 631, 697, 1624, 1648
CspAI ACCGGT 2 cut(s) 430, 1120
CviAII CATG 8 cut(s) 221, 359, 365, 437, 854, 1528, 2105, 2142
CviQI GTAC 6 cut(s) 36, 475, 631, 697, 1624, 1648
EaeI YGGCCR 1 cut(s) 842
Eam1104I CTCTTC 5 cut(s) 672, 1102, 1189, 1869, 1933
EarI CTCTTC 5 cut(s) 672, 1102, 1189, 1869, 1933
Eco130I CCWWGG 1 cut(s) 2068
Eco31I GGTCTC 2 cut(s) 120, 1129
Eco47I GGWCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
Eco57I CTGAAG 3 cut(s) 45, 104, 1074
Eco72I CACGTG 1 cut(s) 773
Eco88I CYCGRG 1 cut(s) 822
Eco91I GGTNACC 1 cut(s) 635
EcoO109I RGGNCCY 2 cut(s) 818, 1674
EcoO65I GGTNACC 1 cut(s) 635
EcoRII CCWGG 6 cut(s) 379, 424, 520, 556, 622, 814
EcoT14I CCWWGG 1 cut(s) 2068
ErhI CCWWGG 1 cut(s) 2068
Esp3I CGTCTC 2 cut(s) 669, 735
FaeI CATG 8 cut(s) 224, 362, 368, 440, 857, 1531, 2108, 2145
FatI CATG 8 cut(s) 220, 358, 364, 436, 853, 1527, 2104, 2141
FauI CCCGC 1 cut(s) 1414
FbaI TGATCA 2 cut(s) 1684, 2038
FblI GTMKAC 1 cut(s) 212
Fnu4HI GCNGC 7 cut(s) 190, 193, 983, 1034, 1410, 1467, 1908
FokI GGATG 3 cut(s) 918, 1241, 1872
Fsp4HI GCNGC 7 cut(s) 190, 193, 983, 1034, 1410, 1467, 1908
FspBI CTAG 3 cut(s) 1130, 1338, 1989
GlaI GCGC 2 cut(s) 1488, 1906
GluI GCNGC 7 cut(s) 190, 193, 983, 1034, 1410, 1467, 1908
GsaI CCCAGC 2 cut(s) 114, 1821
GsuI CTGGAG 3 cut(s) 477, 579, 798
HaeIII GGCC 1 cut(s) 844
HapII CCGG 4 cut(s) 431, 656, 722, 1121
HgaI GACGC 1 cut(s) 1276
HhaI GCGC 2 cut(s) 1489, 1907
Hin1II CATG 8 cut(s) 224, 362, 368, 440, 857, 1531, 2108, 2145
Hin6I GCGC 2 cut(s) 1487, 1905
HinP1I GCGC 2 cut(s) 1487, 1905
HindIII AAGCTT 3 cut(s) 133, 453, 1004
HpaII CCGG 4 cut(s) 431, 656, 722, 1121
HphI GGTGA 3 cut(s) 647, 659, 725
Hpy166II GTNNAC 5 cut(s) 213, 770, 851, 1343, 1459
Hpy8I GTNNAC 5 cut(s) 213, 770, 851, 1343, 1459
Hpy99I CGWCG 2 cut(s) 927, 1377
HpyAV CCTTC 6 cut(s) 26, 79, 237, 396, 807, 1348
HpyCH4III ACNGT 9 cut(s) 635, 696, 701, 762, 785, 1162, 1652, 1845, 2003
HpyCH4IV ACGT 4 cut(s) 772, 925, 1222, 1923
HpyCH4V TGCA 5 cut(s) 836, 1036, 1246, 1469, 1910
HpyF10VI GCNNNNNNNGC 4 cut(s) 947, 991, 1472, 1513
HpySE526I ACGT 4 cut(s) 772, 925, 1222, 1923
Hsp92II CATG 8 cut(s) 224, 362, 368, 440, 857, 1531, 2108, 2145
HspAI GCGC 2 cut(s) 1487, 1905
KpnI GGTACC 1 cut(s) 478
Ksp22I TGATCA 2 cut(s) 1684, 2038
LmnI GCTCC 2 cut(s) 955, 1417
Lsp1109I GCAGC 7 cut(s) 201, 204, 969, 1020, 1396, 1453, 1894
LweI GCATC 1 cut(s) 37
MaeI CTAG 3 cut(s) 1130, 1338, 1989
MaeII ACGT 4 cut(s) 772, 925, 1222, 1923
MaeIII GTNAC 3 cut(s) 635, 1023, 1965
MbiI CCGCTC 1 cut(s) 1293
MflI RGATCY 4 cut(s) 122, 463, 1605, 1747
MhlI GDGCHC 2 cut(s) 812, 952
MluCI AATT 5 cut(s) 100, 154, 1333, 1769, 2075
MlyI GAGTC 2 cut(s) 88, 1532
MroXI GAANNNNTTC 2 cut(s) 414, 2058
MseI TTAA 4 cut(s) 239, 777, 894, 1725
MslI CAYNNNNRTG 7 cut(s) 357, 363, 672, 738, 1163, 1311, 1922
MspA1I CMGCKG 1 cut(s) 1409
MspI CCGG 4 cut(s) 431, 656, 722, 1121
MspR9I CCNGG 8 cut(s) 381, 426, 522, 558, 624, 656, 722, 816
MvaI CCWGG 6 cut(s) 381, 426, 522, 558, 624, 816
MvnI CGCG 3 cut(s) 10, 106, 276
MwoI GCNNNNNNNGC 4 cut(s) 947, 991, 1472, 1513
NciI CCSGG 2 cut(s) 656, 722
NlaIII CATG 8 cut(s) 224, 362, 368, 440, 857, 1531, 2108, 2145
NlaIV GGNNCC 1 cut(s) 476
NmeAIII GCCGAG 1 cut(s) 870
NmuCI GTSAC 1 cut(s) 635
NruI TCGCGA 2 cut(s) 10, 106
OliI CACNNNNGTG 4 cut(s) 672, 738, 1163, 1922
PaeR7I CTCGAG 1 cut(s) 822
PagI TCATGA 2 cut(s) 1527, 2141
PdmI GAANNNNTTC 2 cut(s) 414, 2058
PfeI GAWTC 9 cut(s) 167, 251, 328, 857, 1298, 1553, 1616, 2031, 2045
PflFI GACNNNGTC 1 cut(s) 927
PfoI TCCNGGA 1 cut(s) 556
PinAI ACCGGT 2 cut(s) 430, 1120
PkrI GCNGC 7 cut(s) 191, 194, 984, 1035, 1411, 1468, 1909
PleI GAGTC 2 cut(s) 87, 1532
PmaCI CACGTG 1 cut(s) 773
PmlI CACGTG 1 cut(s) 773
PpsI GAGTC 2 cut(s) 87, 1532
Ppu21I YACGTR 2 cut(s) 773, 1223
PpuMI RGGWCCY 2 cut(s) 818, 1674
Psp5II RGGWCCY 2 cut(s) 818, 1674
Psp6I CCWGG 6 cut(s) 379, 424, 520, 556, 622, 814
PspCI CACGTG 1 cut(s) 773
PspEI GGTNACC 1 cut(s) 635
PspFI CCCAGC 2 cut(s) 110, 1817
PspGI CCWGG 6 cut(s) 379, 424, 520, 556, 622, 814
PspN4I GGNNCC 1 cut(s) 476
PspPI GGNCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
PspPPI RGGWCCY 2 cut(s) 818, 1674
PspXI VCTCGAGB 1 cut(s) 822
PsrI GAACNNNNNNTAC 2 cut(s) 1991, 2023
PstI CTGCAG 2 cut(s) 1038, 1912
PstNI CAGNNNCTG 1 cut(s) 50
PsuI RGATCY 4 cut(s) 122, 463, 1605, 1747
PsyI GACNNNGTC 1 cut(s) 927
RruI TCGCGA 2 cut(s) 10, 106
RsaI GTAC 6 cut(s) 37, 476, 632, 698, 1625, 1649
RsaNI GTAC 6 cut(s) 36, 475, 631, 697, 1624, 1648
RseI CAYNNNNRTG 7 cut(s) 357, 363, 672, 738, 1163, 1311, 1922
SaqAI TTAA 4 cut(s) 239, 777, 894, 1725
SatI GCNGC 7 cut(s) 190, 193, 983, 1034, 1410, 1467, 1908
Sau96I GGNCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
SchI GAGTC 2 cut(s) 88, 1532
ScrFI CCNGG 8 cut(s) 381, 426, 522, 558, 624, 656, 722, 816
SduI GDGCHC 2 cut(s) 812, 952
SfaNI GCATC 1 cut(s) 37
SfcI CTRYAG 3 cut(s) 1034, 1563, 1908
Sfr274I CTCGAG 1 cut(s) 822
SinI GGWCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
SlaI CTCGAG 1 cut(s) 822
SmiMI CAYNNNNRTG 7 cut(s) 357, 363, 672, 738, 1163, 1311, 1922
SmlI CTYRAG 3 cut(s) 136, 450, 822
SmoI CTYRAG 3 cut(s) 136, 450, 822
Sse9I AATT 5 cut(s) 100, 154, 1333, 1769, 2075
SsiI CCGC 5 cut(s) 276, 870, 1041, 1291, 1407
SspMI CTAG 3 cut(s) 1130, 1338, 1989
StyD4I CCNGG 8 cut(s) 379, 424, 520, 556, 622, 654, 720, 814
StyI CCWWGG 1 cut(s) 2068
TaaI ACNGT 9 cut(s) 635, 696, 701, 762, 785, 1162, 1652, 1845, 2003
TaiI ACGT 4 cut(s) 775, 928, 1225, 1926
TaqI TCGA 7 cut(s) 788, 803, 823, 922, 1328, 1655, 1962
TasI AATT 5 cut(s) 100, 154, 1333, 1769, 2075
TatI WGTACW 1 cut(s) 696
TfiI GAWTC 9 cut(s) 167, 251, 328, 857, 1298, 1553, 1616, 2031, 2045
Tru1I TTAA 4 cut(s) 239, 777, 894, 1725
Tru9I TTAA 4 cut(s) 239, 777, 894, 1725
TscAI CASTG 4 cut(s) 706, 1043, 1248, 1765
TseFI GTSAC 1 cut(s) 635
TseI GCWGC 7 cut(s) 189, 192, 982, 1033, 1409, 1466, 1907
Tsp45I GTSAC 1 cut(s) 635
TspGWI ACGGA 3 cut(s) 174, 636, 702
TspRI CASTG 4 cut(s) 706, 1043, 1248, 1765
Tth111I GACNNNGTC 1 cut(s) 927
VpaK11BI GGWCC 6 cut(s) 383, 428, 581, 818, 1674, 1778
XapI RAATTY 1 cut(s) 100
XbaI TCTAGA 1 cut(s) 1129
XhoI CTCGAG 1 cut(s) 822
XmiI GTMKAC 1 cut(s) 212
XmnI GAANNNNTTC 2 cut(s) 414, 2058
XspI CTAG 3 cut(s) 1130, 1338, 1989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.