MD14G1121700.v1.1

Probable zinc-ribbon domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0008950
Physical Location & Seq
Forward (+)
19642150 .. 19646309
4160 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1121700.v1.1.491

Sequence Viewer

Length: 2652 bp
ATGGATTTAAGGAGAGGTAGAGGAAAAGAGAGAGTTTTCGGAGATCGAAAGGTTAATTCGATTAGTGGTAGTTCATCAAGAACAGATAACAAGGAGGTTATGGTTGATAATTATGGTAATAATGTTAGGGAAAGGGTTAATGCTTTAAGGTTTGAGCAAAGAGGTGCAGCTATAGAAACTGAGTTTGTTGAAAAATACAGTCGAATTTCACAGTTCCCAATAGATAATTGGATGTCTGGAGATGAGATTGAAATGAACATGAGTAGGTCTATGTCTGTAAATTCAAGTGTAGGAGATGTTTCAGCCCACTTACAGAATTTTGCTGGGTCAGTGAGAGCAAAAGGAAGTATGGACCAGTTTCGGGGTGTAGAAAGAGATCGGTTTGATGGGTTTTACGCGAGCTCCAGGGTCGGGGCTCAGCGTGGAAGAATCCCAACTTCTGCTTATCCTGATGAGGGGCCTTCAAACTATAAGGTAGATTCTTTTGATGCTATGAGTGAAGTTGAAAATTTGGAGCAGGATCGAGCGGAGCTTCTAAGGAAGTTGGATGAGCTGAAGCAGAAACTGAGCAGATCTTATGATGTGGTAGATAAACCATGGGAACCGGTTCCTATGGAGAGGAGTAGGACCCCGCCTGATCCTTATGGTGACCGGTTAACTTATAATCTTTCCATGCAGCCTTACGCTGTGGACGAGCAGATGACAAGGCCCCCTTACTTAAACTATAGTCATGGACATGTTCCTTTTATGGGTTATCGTAACATGGATACGCCAAACTTCTATCCTCCTCAAAGGCATCCCTTGAATGCAATTCCAGAATATGAGGATCCATCTCAGCAACAAATGAAACGGAGGCCTCCCCCTCATCTACTCCAGTACCCAAGACCACAATCTCATGAGTACTTTATGGGGCAGCGCATGGAATTCAATTCAAATCCACATGATAACACTTCTCACTCGCCTGCTTGCTCTTGTTTAGGATGCTACAACCAGAATCGGGTAGCTTCACCCCAAGTCTCGCTTGATGATTTTGGGAATCGAAGGGTTCCAAAAGCTCCGGTTAGTTTGAATACCTACCAACAAGTCAAGCCACATGATTATAATCCCCGACATGCTAGTCCTCCTCCATTGCACACAAGATGGCAAAGCGACTTTGATTCAGAACCAAGAAGCGCAATGGCAGTTAATAGGCGTGGACGAATCTTCCATCCTGTAGCAGGAGGTGCCCCATTCATCACATGCTTTAGTTGCTTTGAAGTACTGAAACTTCCTAGAAAACTTAAGAATACGAATAATAATCAGTCAAAACTGCGGTGTGGTTCCTGTTCAACAGTTATCTCACTTGAAATCAAGAGTAAAAAGCTCATTACTTCTGCTCCTAAAGATTCCAAGCAACAATCTTCTGAGGTTGATCAAAGTTCTAACGAGGCATTAAAAGGCAGCATTTCAAGTCATCATGGTAGTCCGAATGCAGGTGACACCAAATCCTGCTGTGATGATTTAGATCATTCTGATCATTACTTGCCATCCATAGAAACCAAAGACAATTTACTGACAGAAGCATTAAAAGGCAGCATTTCAAGTCTTCATGGTAGTCCGAATGCAGGTGACATCAAATCCCGCTGTGATGATTTAGATCATTCTGATCATAACTTGCCATCCATAGAAACCAAAGACAATTTACTGACAGAAGATCAGACGCTGAACGTGGATGAATCTGAGAAGAGGCAAGGTCTTACTTCAACATCTTCCATCTCTTCCAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGATATCAGATTGTGTAATCGCAAATAGAGATGTTCCCGACTCTGCTGAGTTGCTAAAAAAAGATTCATTTTCTCCAAAGCGTCCAGGTTCGCCTCTTTGGGAGCAGTCTGATAGTCCTAAACGTGCAGTAAGCAGAGATGAGAAGGGAAATGATAGTGACTGCAAGAACCAAGACAAGGCACTCTTTAGAAAGATCATTTCTCCACAGAATTCCGTGAAAGATAGTTCAGTGGAAACTGACGTAGATGTTTCTTACAATGAATATCTCAATACCAACATTTCTCAAGACTCTGCAGAGGGAAGAAAAGAACAAGATCACCCCAAAATCGGCAAGGGTGCTGATTCCTTCTTGGTGGGTCTCATCAAAAAGAGCTTTAAAGATTTCTCAAAATCTAATCAAGCTGTGGAGAAAACAAGGCCTACTGTTTTTATTAATGGGCAACCTATACCGGATCATGTCGTTAAGAAAGCTGAAAAGCTCGCTGGCCCGATTCAACCTGGAGATTATTGGTATGACTTCAGAGCCGGATTCTGGGGTGTGATGGGCCAAACTTGCCTTGGCATAATTCCTCCTTTTATTGAAGAATTCTATTACCCCATTCCAACAAATTGTGCTGCTGGCAATACCAGTGTCTACGTAAATGGGAGAGAGCTACATCAGAGAGATTTGGACCTACTTGCAAGCAGAGGACTACCAACTACAAGAGATAAATTTTATATCGTCGAAATGTCTGGGAGAGTTGTGGATGAGGACTCTGGGAAAGAGTTAAAAAGCCTTGGCAAACTTGCCCCCTCAGTTGAGAAGGCAAAGCGGGGATTCGGCATGAAAGTCCCCAGAATGGTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zinc_ribbon_12

Protein Analysis

884

Amino Acids

99.36

Weight (kDa)

6.12

Isoelectric Point (pI)

55.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_12 PF11331 406 - 450 2.2e-19 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 663, 1101
AarI CACCTGC 2 cut(s) 1463, 1595
AasI GACNNNNNNGTC 1 cut(s) 1116
Acc36I ACCTGC 2 cut(s) 1463, 1595
AccB1I GGYRCC 1 cut(s) 1223
AccBSI CCGCTC 1 cut(s) 527
AccI GTMKAC 1 cut(s) 2436
AccII CGCG 1 cut(s) 398
AciI CCGC 5 cut(s) 527, 632, 1312, 1621, 2614
AclWI GGATC 5 cut(s) 528, 632, 821, 834, 2262
AcsI RAATTY 8 cut(s) 204, 280, 316, 508, 923, 2011, 2387, 2513
AcuI CTGAAG 2 cut(s) 575, 2305
AfaI GTAC 3 cut(s) 878, 902, 1260
AflII CTTAAG 1 cut(s) 1280
AflIII ACRYGT 1 cut(s) 736
AgeI ACCGGT 2 cut(s) 604, 651
AjnI CCWGG 3 cut(s) 404, 1885, 2299
Alw21I GWGCWC 1 cut(s) 404
Alw26I GTCTC 2 cut(s) 1021, 2165
AlwI GGATC 5 cut(s) 528, 632, 821, 834, 2262
AlwNI CAGNNNCTG 2 cut(s) 565, 1702
AoxI GGCC 6 cut(s) 458, 707, 854, 2219, 2287, 2347
ApeKI GCWGC 6 cut(s) 167, 676, 913, 1440, 1572, 2417
ApoI RAATTY 8 cut(s) 204, 280, 316, 508, 923, 2011, 2387, 2513
AseI ATTAAT 1 cut(s) 2235
AsiGI ACCGGT 2 cut(s) 604, 651
Asp700I GAANNNNTTC 1 cut(s) 606
AspLEI GCGC 2 cut(s) 918, 1175
AspS9I GGNCC 7 cut(s) 352, 458, 627, 708, 2288, 2347, 2473
AsuHPI GGTGA 5 cut(s) 659, 999, 1487, 1619, 2111
AvaII GGWCC 3 cut(s) 352, 627, 2473
BaeGI GKGCMC 1 cut(s) 1228
BaeI ACNNNNGTAYC 2 cut(s) 860, 893
BamHI GGATCC 1 cut(s) 826
BanI GGYRCC 1 cut(s) 1223
BanII GRGCYC 2 cut(s) 404, 418
BarI GAAGNNNNNNTAC 2 cut(s) 1251, 1283
BbsI GAAGAC 1 cut(s) 1577
Bbv12I GWGCWC 1 cut(s) 404
BbvI GCAGC 6 cut(s) 179, 688, 925, 1452, 1584, 2404
BccI CCATC 8 cut(s) 380, 838, 1134, 1215, 1534, 1666, 1760, 2338
BciT130I CCWGG 3 cut(s) 406, 1887, 2301
BciVI GTATCC 1 cut(s) 760
BclI TGATCA 3 cut(s) 1411, 1513, 1645
BcoDI GTCTC 2 cut(s) 1021, 2165
BfaI CTAG 2 cut(s) 1116, 1272
BfmI CTRYAG 4 cut(s) 171, 724, 1212, 2094
BfrI CTTAAG 1 cut(s) 1280
BfuAI ACCTGC 2 cut(s) 1463, 1595
BfuI GTATCC 1 cut(s) 760
BglII AGATCT 1 cut(s) 572
BisI GCNGC 6 cut(s) 168, 677, 914, 1441, 1573, 2418
BlpI GCTNAGC 1 cut(s) 417
BlsI GCNGC 6 cut(s) 169, 678, 915, 1442, 1574, 2419
BmcAI AGTACT 2 cut(s) 902, 1260
Bme1390I CCNGG 3 cut(s) 406, 1887, 2301
Bme18I GGWCC 3 cut(s) 352, 627, 2473
BmgT120I GGNCC 7 cut(s) 352, 458, 627, 708, 2288, 2347, 2473
BmiI GGNNCC 9 cut(s) 459, 603, 609, 629, 710, 828, 1047, 1225, 1321
BmrFI CCNGG 3 cut(s) 406, 1887, 2301
BmsI GCATC 3 cut(s) 478, 805, 971
BpiI GAAGAC 1 cut(s) 1577
BpmI CTGGAG 4 cut(s) 258, 388, 857, 2322
Bpu1102I GCTNAGC 1 cut(s) 417
BpuEI CTTGAG 1 cut(s) 2070
BsaAI YACGTR 1 cut(s) 2440
BsaBI GATNNNNATC 3 cut(s) 1101, 1503, 1635
BsaI GGTCTC 1 cut(s) 2165
BsaJI CCNNGG 4 cut(s) 405, 596, 2359, 2578
BsaWI WCCGGW 4 cut(s) 604, 651, 1057, 2251
BsaXI ACNNNNNCTCC 4 cut(s) 386, 416, 1360, 1390
Bse118I RCCGGY 2 cut(s) 604, 651
Bse1I ACTGG 3 cut(s) 355, 874, 2430
Bse3DI GCAATG 2 cut(s) 1127, 1182
Bse8I GATNNNNATC 3 cut(s) 1101, 1503, 1635
BseBI CCWGG 3 cut(s) 406, 1887, 2301
BseDI CCNNGG 4 cut(s) 405, 596, 2359, 2578
BseGI GGATG 9 cut(s) 237, 553, 796, 986, 1207, 1526, 1658, 1717, 2554
BseJI GATNNNNATC 3 cut(s) 1101, 1503, 1635
BseMI GCAATG 2 cut(s) 1127, 1182
BseMII CTCAG 8 cut(s) 171, 431, 557, 848, 1395, 1710, 1839, 2610
BseNI ACTGG 3 cut(s) 355, 874, 2430
BseSI GKGCMC 1 cut(s) 1228
BseXI GCAGC 6 cut(s) 179, 688, 925, 1452, 1584, 2404
BseYI CCCAGC 1 cut(s) 323
BsgI GTGCAG 2 cut(s) 186, 1947
Bsh1236I CGCG 1 cut(s) 398
BshFI GGCC 6 cut(s) 460, 709, 856, 2221, 2289, 2349
BshNI GGYRCC 1 cut(s) 1223
BshTI ACCGGT 2 cut(s) 604, 651
BsiHKAI GWGCWC 1 cut(s) 404
BsiSI CCGG 5 cut(s) 605, 652, 1058, 2252, 2328
BslFI GGGAC 1 cut(s) 2618
BsmAI GTCTC 2 cut(s) 1021, 2165
BsmFI GGGAC 1 cut(s) 2618
BsmI GAATGC 3 cut(s) 811, 1474, 1606
BsnI GGCC 6 cut(s) 460, 709, 856, 2221, 2289, 2349
Bso31I GGTCTC 1 cut(s) 2165
Bsp1286I GDGCHC 3 cut(s) 404, 418, 1228
Bsp1720I GCTNAGC 1 cut(s) 417
Bsp19I CCATGG 1 cut(s) 596
BspACI CCGC 5 cut(s) 527, 632, 1312, 1621, 2614
BspANI GGCC 6 cut(s) 460, 709, 856, 2221, 2289, 2349
BspCNI CTCAG 8 cut(s) 172, 430, 558, 847, 1396, 1711, 1840, 2609
BspFNI CGCG 1 cut(s) 398
BspHI TCATGA 1 cut(s) 895
BspLI GGNNCC 9 cut(s) 459, 603, 609, 629, 710, 828, 1047, 1225, 1321
BspMAI CTGCAG 1 cut(s) 2098
BspMI ACCTGC 2 cut(s) 1463, 1595
BspPI GGATC 5 cut(s) 528, 632, 821, 834, 2262
BspT107I GGYRCC 1 cut(s) 1223
BspTI CTTAAG 1 cut(s) 1280
BspTNI GGTCTC 1 cut(s) 2165
BsrBI CCGCTC 1 cut(s) 527
BsrDI GCAATG 2 cut(s) 1127, 1182
BsrFI RCCGGY 2 cut(s) 604, 651
BsrI ACTGG 3 cut(s) 355, 874, 2430
BssAI RCCGGY 2 cut(s) 604, 651
BssECI CCNNGG 4 cut(s) 405, 596, 2359, 2578
BssT1I CCWWGG 3 cut(s) 596, 2359, 2578
Bst2UI CCWGG 3 cut(s) 406, 1887, 2301
Bst4CI ACNGT 4 cut(s) 200, 213, 1333, 2227
Bst6I CTCTTC 2 cut(s) 1718, 1762
BstAFI CTTAAG 1 cut(s) 1280
BstAPI GCANNNNNTGC 1 cut(s) 1223
BstBAI YACGTR 1 cut(s) 2440
BstC8I GCNNGC 7 cut(s) 400, 963, 967, 2283, 2287, 2422, 2485
BstDEI CTNAG 9 cut(s) 180, 417, 536, 566, 834, 1404, 1719, 1848, 2596
BstDSI CCRYGG 1 cut(s) 596
BstEII GGTNACC 1 cut(s) 647
BstENI CCTNNNNNAGG 1 cut(s) 1215
BstF5I GGATG 9 cut(s) 237, 553, 796, 986, 1207, 1526, 1658, 1717, 2554
BstFNI CGCG 1 cut(s) 398
BstHHI GCGC 2 cut(s) 918, 1175
BstMAI GTCTC 2 cut(s) 1021, 2165
BstMWI GCNNNNNNNGC 3 cut(s) 1223, 1248, 2355
BstNI CCWGG 3 cut(s) 406, 1887, 2301
BstNSI RCATGY 3 cut(s) 740, 1115, 1242
BstPI GGTNACC 1 cut(s) 647
BstSCI CCNGG 3 cut(s) 404, 1885, 2299
BstSFI CTRYAG 4 cut(s) 171, 724, 1212, 2094
BstSLI GKGCMC 1 cut(s) 1228
BstSNI TACGTA 1 cut(s) 2440
BstUI CGCG 1 cut(s) 398
BstV1I GCAGC 6 cut(s) 179, 688, 925, 1452, 1584, 2404
BstV2I GAAGAC 1 cut(s) 1577
BstX2I RGATCY 2 cut(s) 572, 826
BstYI RGATCY 2 cut(s) 572, 826
BsuI GTATCC 1 cut(s) 760
BsuRI GGCC 6 cut(s) 460, 709, 856, 2221, 2289, 2349
BtgI CCRYGG 1 cut(s) 596
BtsCI GGATG 9 cut(s) 237, 553, 796, 986, 1207, 1526, 1658, 1717, 2554
BtsIMutI CAGTG 3 cut(s) 336, 2037, 2437
BveI ACCTGC 2 cut(s) 1463, 1595
Cac8I GCNNGC 7 cut(s) 400, 963, 967, 2283, 2287, 2422, 2485
CaiI CAGNNNCTG 2 cut(s) 565, 1702
CciI TCATGA 1 cut(s) 895
CfoI GCGC 2 cut(s) 918, 1175
Cfr10I RCCGGY 2 cut(s) 604, 651
Cfr13I GGNCC 7 cut(s) 352, 458, 627, 708, 2288, 2347, 2473
CseI GACGC 2 cut(s) 1708, 1871
Csp6I GTAC 3 cut(s) 877, 901, 1259
CspAI ACCGGT 2 cut(s) 604, 651
CviQI GTAC 3 cut(s) 877, 901, 1259
DdeI CTNAG 9 cut(s) 180, 417, 536, 566, 834, 1404, 1719, 1848, 2596
DraI TTTAAA 1 cut(s) 2179
DrdI GACNNNNNNGTC 1 cut(s) 1116
DseDI GACNNNNNNGTC 1 cut(s) 1116
Eam1104I CTCTTC 2 cut(s) 1718, 1762
EarI CTCTTC 2 cut(s) 1718, 1762
Ecl136II GAGCTC 1 cut(s) 402
Eco105I TACGTA 1 cut(s) 2440
Eco130I CCWWGG 3 cut(s) 596, 2359, 2578
Eco147I AGGCCT 2 cut(s) 856, 2221
Eco24I GRGCYC 2 cut(s) 404, 418
Eco31I GGTCTC 1 cut(s) 2165
Eco32I GATATC 1 cut(s) 1806
Eco47I GGWCC 3 cut(s) 352, 627, 2473
Eco53kI GAGCTC 1 cut(s) 402
Eco57I CTGAAG 2 cut(s) 575, 2305
Eco91I GGTNACC 1 cut(s) 647
EcoICRI GAGCTC 1 cut(s) 402
EcoNI CCTNNNNNAGG 1 cut(s) 1215
EcoO109I RGGNCCY 3 cut(s) 458, 627, 708
EcoO65I GGTNACC 1 cut(s) 647
EcoRI GAATTC 3 cut(s) 923, 2011, 2387
EcoRII CCWGG 3 cut(s) 404, 1885, 2299
EcoRV GATATC 1 cut(s) 1806
EcoT14I CCWWGG 3 cut(s) 596, 2359, 2578
EcoT38I GRGCYC 2 cut(s) 404, 418
ErhI CCWWGG 3 cut(s) 596, 2359, 2578
FalI AAGNNNNNCTT 6 cut(s) 697, 729, 1005, 1037, 1970, 2002
FaqI GGGAC 1 cut(s) 2618
FauI CCCGC 3 cut(s) 639, 1628, 2607
FbaI TGATCA 3 cut(s) 1411, 1513, 1645
FblI GTMKAC 1 cut(s) 2436
Fnu4HI GCNGC 6 cut(s) 168, 677, 914, 1441, 1573, 2418
FokI GGATG 9 cut(s) 244, 560, 783, 993, 1194, 1513, 1645, 1724, 2561
FriOI GRGCYC 2 cut(s) 404, 418
Fsp4HI GCNGC 6 cut(s) 168, 677, 914, 1441, 1573, 2418
FspBI CTAG 2 cut(s) 1116, 1272
GlaI GCGC 2 cut(s) 917, 1174
GluI GCNGC 6 cut(s) 168, 677, 914, 1441, 1573, 2418
GsaI CCCAGC 1 cut(s) 327
GsuI CTGGAG 4 cut(s) 258, 388, 857, 2322
HaeIII GGCC 6 cut(s) 460, 709, 856, 2221, 2289, 2349
HapII CCGG 5 cut(s) 605, 652, 1058, 2252, 2328
HgaI GACGC 2 cut(s) 1708, 1871
HhaI GCGC 2 cut(s) 918, 1175
Hin6I GCGC 2 cut(s) 916, 1173
HinP1I GCGC 2 cut(s) 916, 1173
HincII GTYRAC 1 cut(s) 657
HindII GTYRAC 1 cut(s) 657
HpaI GTTAAC 1 cut(s) 657
HpaII CCGG 5 cut(s) 605, 652, 1058, 2252, 2328
HphI GGTGA 5 cut(s) 659, 999, 1487, 1619, 2111
Hpy166II GTNNAC 4 cut(s) 657, 691, 1196, 2437
Hpy188III TCNNGA 8 cut(s) 78, 237, 449, 815, 896, 1351, 1838, 2087
Hpy8I GTNNAC 4 cut(s) 657, 691, 1196, 2437
Hpy99I CGWCG 1 cut(s) 2528
HpyAV CCTTC 6 cut(s) 471, 1035, 1759, 1939, 2158, 2599
HpyCH4III ACNGT 4 cut(s) 200, 213, 1333, 2227
HpyCH4IV ACGT 4 cut(s) 1707, 1924, 2043, 2439
HpyF10VI GCNNNNNNNGC 3 cut(s) 1223, 1248, 2355
HpyF3I CTNAG 9 cut(s) 180, 417, 536, 566, 834, 1404, 1719, 1848, 2596
HpySE526I ACGT 4 cut(s) 1707, 1924, 2043, 2439
HspAI GCGC 2 cut(s) 916, 1173
Ksp22I TGATCA 3 cut(s) 1411, 1513, 1645
KspAI GTTAAC 1 cut(s) 657
LmnI GCTCC 6 cut(s) 407, 514, 529, 1060, 1381, 1903
Lsp1109I GCAGC 6 cut(s) 179, 688, 925, 1452, 1584, 2404
LweI GCATC 3 cut(s) 478, 805, 971
MaeI CTAG 2 cut(s) 1116, 1272
MaeII ACGT 4 cut(s) 1707, 1924, 2043, 2439
MaeIII GTNAC 5 cut(s) 647, 758, 1475, 1607, 1958
MbiI CCGCTC 1 cut(s) 527
MflI RGATCY 2 cut(s) 572, 826
MhlI GDGCHC 3 cut(s) 404, 418, 1228
MlyI GAGTC 3 cut(s) 1835, 2084, 2549
MmeI TCCRAC 2 cut(s) 525, 2429
MroXI GAANNNNTTC 1 cut(s) 606
MslI CAYNNNNRTG 1 cut(s) 735
MspA1I CMGCKG 1 cut(s) 1623
MspCI CTTAAG 1 cut(s) 1280
MspI CCGG 5 cut(s) 605, 652, 1058, 2252, 2328
MspR9I CCNGG 3 cut(s) 406, 1887, 2301
Mva1269I GAATGC 3 cut(s) 811, 1474, 1606
MvaI CCWGG 3 cut(s) 406, 1887, 2301
MvnI CGCG 1 cut(s) 398
MwoI GCNNNNNNNGC 3 cut(s) 1223, 1248, 2355
NcoI CCATGG 1 cut(s) 596
NlaIV GGNNCC 9 cut(s) 459, 603, 609, 629, 710, 828, 1047, 1225, 1321
NmuCI GTSAC 4 cut(s) 647, 1475, 1607, 1958
NspI RCATGY 3 cut(s) 740, 1115, 1242
PagI TCATGA 1 cut(s) 895
PaqCI CACCTGC 2 cut(s) 1463, 1595
PceI AGGCCT 2 cut(s) 856, 2221
PciI ACATGT 1 cut(s) 736
PcsI WCGNNNNNNNCGW 1 cut(s) 690
PctI GAATGC 3 cut(s) 811, 1474, 1606
PdmI GAANNNNTTC 1 cut(s) 606
PinAI ACCGGT 2 cut(s) 604, 651
PkrI GCNGC 6 cut(s) 169, 678, 915, 1442, 1574, 2419
PleI GAGTC 3 cut(s) 1835, 2084, 2549
PpsI GAGTC 3 cut(s) 1835, 2084, 2549
Ppu21I YACGTR 1 cut(s) 2440
PpuMI RGGWCCY 1 cut(s) 627
PscI ACATGT 1 cut(s) 736
PshBI ATTAAT 1 cut(s) 2235
PsiI TTATAA 2 cut(s) 663, 1101
Psp124BI GAGCTC 1 cut(s) 404
Psp5II RGGWCCY 1 cut(s) 627
Psp6I CCWGG 3 cut(s) 404, 1885, 2299
PspEI GGTNACC 1 cut(s) 647
PspFI CCCAGC 1 cut(s) 323
PspGI CCWGG 3 cut(s) 404, 1885, 2299
PspN4I GGNNCC 9 cut(s) 459, 603, 609, 629, 710, 828, 1047, 1225, 1321
PspPI GGNCC 7 cut(s) 352, 458, 627, 708, 2288, 2347, 2473
PspPPI RGGWCCY 1 cut(s) 627
PstI CTGCAG 1 cut(s) 2098
PstNI CAGNNNCTG 2 cut(s) 565, 1702
PsuI RGATCY 2 cut(s) 572, 826
RsaI GTAC 3 cut(s) 878, 902, 1260
RsaNI GTAC 3 cut(s) 877, 901, 1259
RseI CAYNNNNRTG 1 cut(s) 735
SacI GAGCTC 1 cut(s) 404
SatI GCNGC 6 cut(s) 168, 677, 914, 1441, 1573, 2418
Sau96I GGNCC 7 cut(s) 352, 458, 627, 708, 2288, 2347, 2473
ScaI AGTACT 2 cut(s) 902, 1260
SchI GAGTC 3 cut(s) 1835, 2084, 2549
ScrFI CCNGG 3 cut(s) 406, 1887, 2301
SduI GDGCHC 3 cut(s) 404, 418, 1228
SfaNI GCATC 3 cut(s) 478, 805, 971
SfcI CTRYAG 4 cut(s) 171, 724, 1212, 2094
SinI GGWCC 3 cut(s) 352, 627, 2473
SmiMI CAYNNNNRTG 1 cut(s) 735
SmlI CTYRAG 2 cut(s) 1280, 2085
SmoI CTYRAG 2 cut(s) 1280, 2085
SnaBI TACGTA 1 cut(s) 2440
SseBI AGGCCT 2 cut(s) 856, 2221
SsiI CCGC 5 cut(s) 527, 632, 1312, 1621, 2614
SspMI CTAG 2 cut(s) 1116, 1272
SstI GAGCTC 1 cut(s) 404
StuI AGGCCT 2 cut(s) 856, 2221
StyD4I CCNGG 3 cut(s) 404, 1885, 2299
StyI CCWWGG 3 cut(s) 596, 2359, 2578
TaaI ACNGT 4 cut(s) 200, 213, 1333, 2227
TaiI ACGT 4 cut(s) 1710, 1927, 2046, 2442
TaqI TCGA 6 cut(s) 46, 59, 202, 523, 1039, 2526
TatI WGTACW 2 cut(s) 900, 1258
TscAI CASTG 3 cut(s) 336, 2037, 2437
TseFI GTSAC 4 cut(s) 647, 1475, 1607, 1958
TseI GCWGC 6 cut(s) 167, 676, 913, 1440, 1572, 2417
Tsp45I GTSAC 4 cut(s) 647, 1475, 1607, 1958
TspDTI ATGAA 9 cut(s) 63, 269, 860, 1222, 1577, 1728, 1857, 2076, 2642
TspGWI ACGGA 2 cut(s) 865, 2005
TspRI CASTG 3 cut(s) 336, 2037, 2437
Vha464I CTTAAG 1 cut(s) 1280
VpaK11BI GGWCC 3 cut(s) 352, 627, 2473
VspI ATTAAT 1 cut(s) 2235
XagI CCTNNNNNAGG 1 cut(s) 1215
XapI RAATTY 8 cut(s) 204, 280, 316, 508, 923, 2011, 2387, 2513
XceI RCATGY 3 cut(s) 740, 1115, 1242
XcmI CCANNNNNNNNNTGG 2 cut(s) 225, 2357
XmiI GTMKAC 1 cut(s) 2436
XmnI GAANNNNTTC 1 cut(s) 606
XspI CTAG 2 cut(s) 1116, 1272
ZrmI AGTACT 2 cut(s) 902, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.