FvH4_5g04100

Probable zinc-ribbon domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0008950
Physical Location & Seq
Forward (+)
2448667 .. 2452839
4173 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g04100.t2

Sequence Viewer

Length: 2547 bp
ATGGACTTGAGGCGAGGTAGAGGAAAAGAGAGGGTCCTTGGAGAAAGAAAGGTTGATTCGAGTAGTGGTAGTAGTACAAGTTCATTAAGAAGAGAGACTAAAGAGGTTTCGAATGATAATCATGTTAATGTTAGGGAAGGGGTTTGGGGTTTAAGGCTTGAGGAAAGTGGTGCAGCAAAGAGAAAGGAGTTTGTTGAAAGATATAGTCGATTATCAGAGTTCCCCATTGATAATCTGACCCCTGTAAATGATTTTGATACGAATATGAATAGGTCTGAGTCTGTAAATTCAAGTGTAGGAGATATTTCGACCCAGTTCAGGTATCTTCCAGGGTCATTGAGATCAAAAGAAAGTATGGATCAGTGGGGTGTTGAAAGAGATCGGTATGAGGGGTTTTATGGGAACACCAGAGCTGCTGCTGAGCGAGGAAGAATGCCAATTTCTGCTTATCCTAATGAGGGGCCTTCAAATTACCAGCTAGAGTCTTTTCATGGTTATGGTGAGCAGAAGTATGATGTGAATGGAGTTGAAGATTTAGGACCTGATCGAGCTGAGCTGCTTAGGAAATTGGATCAGCTGAAGGAGCAACTTAGCAGATCTTATGCTGTGGCAGATAGACCAAGGGATATGGTTCCCCCAGAGAGGAGTAGGACTCCACCGGATCCTTATGGTGACCTGTTAACTTATAATCTTTCACTGCAGCAGCAATATGCTGTGGACAAGCAGATGCCGAGATCCCCTTACTTGACCTATAGCCATGGGCCGGTTCCTATTATGGATCATCACAACATGGATATGCCGAACTTTTATCCTCCACAAAGGAATAACTTGAATGTGATTCCAGAATACGAGGATCCATCTCAGCCACAAATGACAAGGAGGGCCTCCCATCATCCACTCCAATACGCACAACCACAACACTTTATGGGCCAACACATGGGTTTCAACCGGAATCCACTTGCATCATATCCACATGAACATGTTTTACACTCGCCTGCATGCACTTGTTCAGGCTGCTACAGCCAGAATTGGGTGGTTCCACCCCAAGCCCCGGATACTGATTTTGGCAACAGAAGTATTCCAAAAGGTCCAGTTAATTTGAATTCCTATCATCATGTCAATCCTGCTACATATAACCCACGTAATTTACCCAGAGATGCTAGTCCCATGTTGCACACAAGATGGCAAGGTGATGTTGACAAAGACATGAGTGGTTATGGTGATCGACATCTAGGAAAGATGATCAACAGGAAGACACAGATTTCCCATCCTTTCCGAGGTGGTGCCCCATTCATTACATGCTTCCATTGCTTTGAGTTGCTGAAACTTCCCAGAAAATTCAAGAAAAGAAGTAAACATCAGTCAGAGCTGCGTTGTGGTTCCTGTCTGACTGTTATTTCACTTGAAGTTAATAACAAAAGGCTCATTACATCTGCTCCTAAAGAATCCAAGCAATCATCTTCTGAGGTTGATCAAAATTCTAAGGAGGTAGTAAAGCGCAACGTCTTAAATTTTCCTGATTGTGTGAATGCCGATGACACCAACTCCTACCATGATGATGTAGATAACTCTGGTCAGAACCTTCAGTTGATAGTTGCCGAAGATAATTCACTGGCAGAAGATGAGAGGCTGAACTTGGATAAATCTGAAAAGAGGGAAGGCCATAGCTCTTCATCTTCCATCTTTTCCCAGGAGGAAGAAGGCATCCCAGATAGTTTGGTTATCCAGAGAGATGTTTCTGACTCCGTTGAAATGCTCACAAAAGATGCCTGTCCTCCAACAGCTCCAGGTTCACCTCTTTGGGAGCAGCCTGATAGTCCTTCCAAACATGAAGTAAGCAGAGATGAGAAGGGAAATAAGGGTGCATGTATAGACCAAGACAAGGTGATCTTTAGTAGGAGCACATCTGCGCAGAATTCTGTGAAAGAGATGTCAGTAGAAACCGGGGTGGATGATTCGTTCAATGATTATCTCAATACCAACATATCACAGGACTCTACAGAGGCAAGCAAAGAAGATCGTCCCAAGATCCGCAAGGGTTCGGATAACTTCTTGATTGGTCTCATCAAAAAGAGTTTTAAAGATTCGTCGAAATCTTATCAAAATGTGGAGAGAACTAAGGTTTTAATCAATGGGCAACCTATACCGGATCATCTCATAAGGAAAGCTGAAAAGCTTGCTGGCACAATTCAACCAGGAGATTATTGGTATGACTTCAGAGCTGGATTCTGGGGTGTGATGGACCATCCTTGCCTTGGCATAATTCCTCCATTTATAGAAGAGTTCAGTTACCCGATGCCAACAAATTGTGGTGCCGGCAATACTGGTGTCTATGTTAACGGAAGAGAGCTACATCAGAGAGATTTAGACCTACTTGCAAGCAGGGGACTGCCAACTACAAGAGAGAGATTTTATATCCTTGAAATTTCTGGGAGACTTGTGGATGAGGACTCTGGGGAAGAACTAAAAAGCCTAGGCAGACTTGCCCCGACAATTGAGAAGGTAAAACATGGATTTGGCATGAAAGTCCCCAGAATGGCTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zinc_ribbon_12

Protein Analysis

849

Amino Acids

95.86

Weight (kDa)

6.2

Isoelectric Point (pI)

49.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_12 PF11331 427 - 470 6.8e-18 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 687
Acc16I TGCGCA 1 cut(s) 1911
AccB1I GGYRCC 2 cut(s) 1283, 2312
AccB7I CCANNNNNTGG 1 cut(s) 937
AciI CCGC 1 cut(s) 2032
AcsI RAATTY 7 cut(s) 286, 1102, 1337, 1477, 1510, 1915, 2424
AcuI CTGAAG 3 cut(s) 599, 1568, 2200
AfaI GTAC 1 cut(s) 76
AflIII ACRYGT 1 cut(s) 979
AjnI CCWGG 4 cut(s) 328, 1689, 1786, 2194
AloI GAACNNNNNNTCC 2 cut(s) 1943, 1975
Alw21I GWGCWC 1 cut(s) 1904
Alw26I GTCTC 3 cut(s) 89, 2066, 2428
AoxI GGCC 5 cut(s) 461, 761, 882, 928, 1660
ApeKI GCWGC 9 cut(s) 173, 413, 416, 556, 700, 703, 1014, 1369, 1807
ApoI RAATTY 7 cut(s) 286, 1102, 1337, 1477, 1510, 1915, 2424
AspA2I CCTAGG 1 cut(s) 2473
AspLEI GCGC 2 cut(s) 1500, 1912
AspS9I GGNCC 8 cut(s) 34, 461, 539, 761, 882, 928, 1088, 2242
AsuC2I CCSGG 2 cut(s) 1052, 1945
AsuHPI GGTGA 6 cut(s) 512, 683, 1202, 1232, 1785, 1897
AsuII TTCGAA 1 cut(s) 110
AvaII GGWCC 4 cut(s) 34, 539, 1088, 2242
AvrII CCTAGG 1 cut(s) 2473
BaeGI GKGCMC 1 cut(s) 1288
BamHI GGATCC 2 cut(s) 661, 853
BanI GGYRCC 2 cut(s) 1283, 2312
BbsI GAAGAC 1 cut(s) 1259
Bbv12I GWGCWC 1 cut(s) 1904
BbvI GCAGC 9 cut(s) 185, 400, 403, 543, 712, 715, 1001, 1356, 1819
BccI CCATC 7 cut(s) 865, 897, 1176, 1275, 1688, 2233, 2253
BciT130I CCWGG 4 cut(s) 330, 1691, 1788, 2196
BciVI GTATCC 1 cut(s) 1048
BclI TGATCA 2 cut(s) 1242, 1471
BcnI CCSGG 2 cut(s) 1052, 1945
BcoDI GTCTC 3 cut(s) 89, 2066, 2428
BfaI CTAG 4 cut(s) 479, 1161, 1232, 2474
BfmI CTRYAG 4 cut(s) 698, 751, 1018, 1998
BfuI GTATCC 1 cut(s) 1048
BglII AGATCT 1 cut(s) 596
BisI GCNGC 9 cut(s) 174, 414, 417, 557, 701, 704, 1015, 1370, 1808
BlnI CCTAGG 1 cut(s) 2473
BlpI GCTNAGC 2 cut(s) 420, 552
BlsI GCNGC 9 cut(s) 175, 415, 418, 558, 702, 705, 1016, 1371, 1809
Bme1390I CCNGG 6 cut(s) 330, 1052, 1691, 1788, 1945, 2196
Bme18I GGWCC 4 cut(s) 34, 539, 1088, 2242
BmgT120I GGNCC 8 cut(s) 34, 461, 539, 761, 882, 928, 1088, 2242
BmrFI CCNGG 6 cut(s) 330, 1052, 1691, 1788, 1945, 2196
BmrI ACTGGG 1 cut(s) 307
BmsI GCATC 6 cut(s) 717, 971, 1147, 1713, 1756, 2286
BmuI ACTGGG 1 cut(s) 307
BpiI GAAGAC 1 cut(s) 1259
BplI GAGNNNNNCTC 2 cut(s) 637, 669
BpmI CTGGAG 1 cut(s) 1770
Bpu10I CCTNAGC 1 cut(s) 560
Bpu1102I GCTNAGC 2 cut(s) 420, 552
Bpu14I TTCGAA 1 cut(s) 110
BpuEI CTTGAG 2 cut(s) 28, 179
BpuMI CCSGG 2 cut(s) 1052, 1945
BsaAI YACGTR 1 cut(s) 1142
BsaBI GATNNNNATC 1 cut(s) 1227
BsaI GGTCTC 1 cut(s) 2066
BsaWI WCCGGW 3 cut(s) 658, 948, 2146
BsaXI ACNNNNNCTCC 4 cut(s) 1420, 1450, 1529, 1559
Bse118I RCCGGY 2 cut(s) 763, 2315
Bse1I ACTGG 4 cut(s) 313, 1091, 1617, 2329
Bse3DI GCAATG 1 cut(s) 1306
Bse8I GATNNNNATC 1 cut(s) 1227
BseBI CCWGG 4 cut(s) 330, 1691, 1788, 2196
BseGI GGATG 6 cut(s) 892, 1267, 1704, 1957, 2245, 2449
BseJI GATNNNNATC 1 cut(s) 1227
BseMI GCAATG 1 cut(s) 1306
BseMII CTCAG 5 cut(s) 267, 411, 543, 875, 1455
BseNI ACTGG 4 cut(s) 313, 1091, 1617, 2329
BseRI GAGGAG 1 cut(s) 658
BseSI GKGCMC 1 cut(s) 1288
BseXI GCAGC 9 cut(s) 185, 400, 403, 543, 712, 715, 1001, 1356, 1819
BsgI GTGCAG 1 cut(s) 192
BshFI GGCC 5 cut(s) 463, 763, 884, 930, 1662
BshNI GGYRCC 2 cut(s) 1283, 2312
BsiHKAI GWGCWC 1 cut(s) 1904
BsiSI CCGG 7 cut(s) 659, 764, 949, 1052, 1944, 2147, 2316
BslFI GGGAC 4 cut(s) 1149, 2007, 2400, 2513
BsmAI GTCTC 3 cut(s) 89, 2066, 2428
BsmFI GGGAC 4 cut(s) 1149, 2007, 2400, 2513
BsmI GAATGC 2 cut(s) 438, 1534
BsnI GGCC 5 cut(s) 463, 763, 884, 930, 1662
Bso31I GGTCTC 1 cut(s) 2066
Bsp119I TTCGAA 1 cut(s) 110
Bsp1286I GDGCHC 2 cut(s) 1288, 1904
Bsp1720I GCTNAGC 2 cut(s) 420, 552
Bsp19I CCATGG 1 cut(s) 757
BspACI CCGC 1 cut(s) 2032
BspANI GGCC 5 cut(s) 463, 763, 884, 930, 1662
BspCNI CTCAG 5 cut(s) 268, 412, 544, 874, 1456
BspMAI CTGCAG 1 cut(s) 702
BspQI GCTCTTC 1 cut(s) 1675
BspT104I TTCGAA 1 cut(s) 110
BspT107I GGYRCC 2 cut(s) 1283, 2312
BspTNI GGTCTC 1 cut(s) 2066
BsrDI GCAATG 1 cut(s) 1306
BsrFI RCCGGY 2 cut(s) 763, 2315
BsrI ACTGG 4 cut(s) 313, 1091, 1617, 2329
BssAI RCCGGY 2 cut(s) 763, 2315
BssT1I CCWWGG 5 cut(s) 37, 620, 757, 2254, 2473
Bst2UI CCWGG 4 cut(s) 330, 1691, 1788, 2196
Bst4CI ACNGT 1 cut(s) 1393
Bst6I CTCTTC 4 cut(s) 85, 1675, 2274, 2338
BstBAI YACGTR 1 cut(s) 1142
BstBI TTCGAA 1 cut(s) 110
BstC8I GCNNGC 7 cut(s) 996, 1000, 2008, 2178, 2182, 2317, 2380
BstDEI CTNAG 9 cut(s) 276, 420, 552, 560, 590, 861, 1464, 1482, 2118
BstDSI CCRYGG 1 cut(s) 757
BstEII GGTNACC 1 cut(s) 671
BstENI CCTNNNNNAGG 1 cut(s) 1275
BstF5I GGATG 6 cut(s) 892, 1267, 1704, 1957, 2245, 2449
BstHHI GCGC 2 cut(s) 1500, 1912
BstMAI GTCTC 3 cut(s) 89, 2066, 2428
BstMWI GCNNNNNNNGC 3 cut(s) 583, 1020, 1308
BstNI CCWGG 4 cut(s) 330, 1691, 1788, 2196
BstNSI RCATGY 4 cut(s) 983, 1002, 1302, 1869
BstPI GGTNACC 1 cut(s) 671
BstSCI CCNGG 6 cut(s) 328, 1050, 1689, 1786, 1943, 2194
BstSFI CTRYAG 4 cut(s) 698, 751, 1018, 1998
BstSLI GKGCMC 1 cut(s) 1288
BstV1I GCAGC 9 cut(s) 185, 400, 403, 543, 712, 715, 1001, 1356, 1819
BstV2I GAAGAC 1 cut(s) 1259
BstX2I RGATCY 5 cut(s) 596, 661, 734, 853, 2028
BstYI RGATCY 5 cut(s) 596, 661, 734, 853, 2028
BsuI GTATCC 1 cut(s) 1048
BsuRI GGCC 5 cut(s) 463, 763, 884, 930, 1662
BtgI CCRYGG 1 cut(s) 757
BtsCI GGATG 6 cut(s) 892, 1267, 1704, 1957, 2245, 2449
BtsI GCAGTG 1 cut(s) 695
BtsIMutI CAGTG 3 cut(s) 368, 695, 1610
Cac8I GCNNGC 7 cut(s) 996, 1000, 2008, 2178, 2182, 2317, 2380
CfoI GCGC 2 cut(s) 1500, 1912
Cfr10I RCCGGY 2 cut(s) 763, 2315
Cfr13I GGNCC 8 cut(s) 34, 461, 539, 761, 882, 928, 1088, 2242
Csp6I GTAC 1 cut(s) 75
CviQI GTAC 1 cut(s) 75
DdeI CTNAG 9 cut(s) 276, 420, 552, 560, 590, 861, 1464, 1482, 2118
DraI TTTAAA 1 cut(s) 2080
Eam1104I CTCTTC 4 cut(s) 85, 1675, 2274, 2338
EarI CTCTTC 4 cut(s) 85, 1675, 2274, 2338
Eco130I CCWWGG 5 cut(s) 37, 620, 757, 2254, 2473
Eco31I GGTCTC 1 cut(s) 2066
Eco47I GGWCC 4 cut(s) 34, 539, 1088, 2242
Eco57I CTGAAG 3 cut(s) 599, 1568, 2200
Eco91I GGTNACC 1 cut(s) 671
EcoNI CCTNNNNNAGG 1 cut(s) 1275
EcoO109I RGGNCCY 4 cut(s) 34, 461, 539, 882
EcoO65I GGTNACC 1 cut(s) 671
EcoRI GAATTC 2 cut(s) 1102, 1915
EcoRII CCWGG 4 cut(s) 328, 1689, 1786, 2194
EcoT14I CCWWGG 5 cut(s) 37, 620, 757, 2254, 2473
ErhI CCWWGG 5 cut(s) 37, 620, 757, 2254, 2473
FalI AAGNNNNNCTT 2 cut(s) 1874, 1906
FaqI GGGAC 4 cut(s) 1149, 2007, 2400, 2513
FbaI TGATCA 2 cut(s) 1242, 1471
Fnu4HI GCNGC 9 cut(s) 174, 414, 417, 557, 701, 704, 1015, 1370, 1808
FokI GGATG 6 cut(s) 879, 1254, 1691, 1964, 2232, 2456
Fsp4HI GCNGC 9 cut(s) 174, 414, 417, 557, 701, 704, 1015, 1370, 1808
FspBI CTAG 4 cut(s) 479, 1161, 1232, 2474
FspI TGCGCA 1 cut(s) 1911
GlaI GCGC 2 cut(s) 1499, 1911
GluI GCNGC 9 cut(s) 174, 414, 417, 557, 701, 704, 1015, 1370, 1808
GsuI CTGGAG 1 cut(s) 1770
HaeIII GGCC 5 cut(s) 463, 763, 884, 930, 1662
HapII CCGG 7 cut(s) 659, 764, 949, 1052, 1944, 2147, 2316
HhaI GCGC 2 cut(s) 1500, 1912
Hin6I GCGC 2 cut(s) 1498, 1910
HinP1I GCGC 2 cut(s) 1498, 1910
HincII GTYRAC 3 cut(s) 681, 1198, 2338
HindII GTYRAC 3 cut(s) 681, 1198, 2338
HindIII AAGCTT 1 cut(s) 2174
HpaI GTTAAC 2 cut(s) 681, 2338
HpaII CCGG 7 cut(s) 659, 764, 949, 1052, 1944, 2147, 2316
HphI GGTGA 6 cut(s) 512, 683, 1202, 1232, 1785, 1897
Hpy166II GTNNAC 6 cut(s) 681, 718, 1198, 1355, 1793, 2338
Hpy188III TCNNGA 5 cut(s) 842, 1342, 1517, 1726, 2053
Hpy8I GTNNAC 6 cut(s) 681, 718, 1198, 1355, 1793, 2338
Hpy99I CGWCG 1 cut(s) 2092
HpyAV CCTTC 9 cut(s) 131, 474, 574, 1592, 1652, 1694, 1830, 1843, 2494
HpyCH4III ACNGT 1 cut(s) 1393
HpyCH4IV ACGT 2 cut(s) 1141, 1503
HpyCH4V TGCA 8 cut(s) 173, 700, 962, 998, 1002, 1174, 1865, 2378
HpyF10VI GCNNNNNNNGC 3 cut(s) 583, 1020, 1308
HpyF3I CTNAG 9 cut(s) 276, 420, 552, 560, 590, 861, 1464, 1482, 2118
HpySE526I ACGT 2 cut(s) 1141, 1503
HspAI GCGC 2 cut(s) 1498, 1910
KroI GCCGGC 1 cut(s) 2315
KroNI GCCGGC 1 cut(s) 2317
Ksp22I TGATCA 2 cut(s) 1242, 1471
KspAI GTTAAC 2 cut(s) 681, 2338
LguI GCTCTTC 1 cut(s) 1675
LmnI GCTCC 5 cut(s) 583, 1441, 1789, 1804, 1899
Lsp1109I GCAGC 9 cut(s) 185, 400, 403, 543, 712, 715, 1001, 1356, 1819
LweI GCATC 6 cut(s) 717, 971, 1147, 1713, 1756, 2286
MaeI CTAG 4 cut(s) 479, 1161, 1232, 2474
MaeII ACGT 2 cut(s) 1141, 1503
MaeIII GTNAC 2 cut(s) 671, 2288
MfeI CAATTG 1 cut(s) 2493
MflI RGATCY 5 cut(s) 596, 661, 734, 853, 2028
MhlI GDGCHC 2 cut(s) 1288, 1904
MlyI GAGTC 6 cut(s) 287, 491, 646, 1736, 1988, 2444
MmeI TCCRAC 1 cut(s) 1802
MroNI GCCGGC 1 cut(s) 2315
MslI CAYNNNNRTG 5 cut(s) 126, 495, 794, 978, 1557
MspA1I CMGCKG 1 cut(s) 577
MspI CCGG 7 cut(s) 659, 764, 949, 1052, 1944, 2147, 2316
MspR9I CCNGG 6 cut(s) 330, 1052, 1691, 1788, 1945, 2196
MunI CAATTG 1 cut(s) 2493
Mva1269I GAATGC 2 cut(s) 438, 1534
MvaI CCWGG 4 cut(s) 330, 1691, 1788, 2196
MwoI GCNNNNNNNGC 3 cut(s) 583, 1020, 1308
NaeI GCCGGC 1 cut(s) 2317
NciI CCSGG 2 cut(s) 1052, 1945
NcoI CCATGG 1 cut(s) 757
NgoMIV GCCGGC 1 cut(s) 2315
NmeAIII GCCGAG 1 cut(s) 756
NmuCI GTSAC 1 cut(s) 671
NsbI TGCGCA 1 cut(s) 1911
NspI RCATGY 4 cut(s) 983, 1002, 1302, 1869
NspV TTCGAA 1 cut(s) 110
PaeI GCATGC 1 cut(s) 1002
PciI ACATGT 1 cut(s) 979
PciSI GCTCTTC 1 cut(s) 1675
PctI GAATGC 2 cut(s) 438, 1534
PdiI GCCGGC 1 cut(s) 2317
PfeI GAWTC 7 cut(s) 56, 838, 952, 1445, 1955, 2084, 2226
PflMI CCANNNNNTGG 1 cut(s) 937
PkrI GCNGC 9 cut(s) 175, 415, 418, 558, 702, 705, 1016, 1371, 1809
PleI GAGTC 6 cut(s) 286, 490, 646, 1736, 1988, 2444
PpsI GAGTC 6 cut(s) 286, 490, 646, 1736, 1988, 2444
Ppu21I YACGTR 1 cut(s) 1142
PpuMI RGGWCCY 2 cut(s) 34, 539
PscI ACATGT 1 cut(s) 979
PsiI TTATAA 1 cut(s) 687
Psp5II RGGWCCY 2 cut(s) 34, 539
Psp6I CCWGG 4 cut(s) 328, 1689, 1786, 2194
PspEI GGTNACC 1 cut(s) 671
PspGI CCWGG 4 cut(s) 328, 1689, 1786, 2194
PspPI GGNCC 8 cut(s) 34, 461, 539, 761, 882, 928, 1088, 2242
PspPPI RGGWCCY 2 cut(s) 34, 539
PsrI GAACNNNNNNTAC 4 cut(s) 64, 96, 969, 1001
PstI CTGCAG 1 cut(s) 702
PsuI RGATCY 5 cut(s) 596, 661, 734, 853, 2028
PvuII CAGCTG 1 cut(s) 577
RsaI GTAC 1 cut(s) 76
RsaNI GTAC 1 cut(s) 75
RseI CAYNNNNRTG 5 cut(s) 126, 495, 794, 978, 1557
SapI GCTCTTC 1 cut(s) 1675
SatI GCNGC 9 cut(s) 174, 414, 417, 557, 701, 704, 1015, 1370, 1808
Sau96I GGNCC 8 cut(s) 34, 461, 539, 761, 882, 928, 1088, 2242
SchI GAGTC 6 cut(s) 287, 491, 646, 1736, 1988, 2444
ScrFI CCNGG 6 cut(s) 330, 1052, 1691, 1788, 1945, 2196
SduI GDGCHC 2 cut(s) 1288, 1904
SfaNI GCATC 6 cut(s) 717, 971, 1147, 1713, 1756, 2286
SfcI CTRYAG 4 cut(s) 698, 751, 1018, 1998
SfuI TTCGAA 1 cut(s) 110
SinI GGWCC 4 cut(s) 34, 539, 1088, 2242
SmiMI CAYNNNNRTG 5 cut(s) 126, 495, 794, 978, 1557
SmlI CTYRAG 2 cut(s) 7, 158
SmoI CTYRAG 2 cut(s) 7, 158
SphI GCATGC 1 cut(s) 1002
SsiI CCGC 1 cut(s) 2032
SspMI CTAG 4 cut(s) 479, 1161, 1232, 2474
StyD4I CCNGG 6 cut(s) 328, 1050, 1689, 1786, 1943, 2194
StyI CCWWGG 5 cut(s) 37, 620, 757, 2254, 2473
TaaI ACNGT 1 cut(s) 1393
TaiI ACGT 2 cut(s) 1144, 1506
TaqI TCGA 7 cut(s) 59, 110, 208, 308, 547, 1225, 2090
TatI WGTACW 1 cut(s) 74
TfiI GAWTC 7 cut(s) 56, 838, 952, 1445, 1955, 2084, 2226
TscAI CASTG 3 cut(s) 368, 702, 1617
TseFI GTSAC 1 cut(s) 671
TseI GCWGC 9 cut(s) 173, 413, 416, 556, 700, 703, 1014, 1369, 1807
Tsp45I GTSAC 1 cut(s) 671
TspDTI ATGAA 8 cut(s) 72, 281, 479, 990, 1282, 1662, 1845, 2537
TspGWI ACGGA 2 cut(s) 1735, 2355
TspRI CASTG 3 cut(s) 368, 702, 1617
Van91I CCANNNNNTGG 1 cut(s) 937
VpaK11BI GGWCC 4 cut(s) 34, 539, 1088, 2242
XagI CCTNNNNNAGG 1 cut(s) 1275
XapI RAATTY 7 cut(s) 286, 1102, 1337, 1477, 1510, 1915, 2424
XceI RCATGY 4 cut(s) 983, 1002, 1302, 1869
XcmI CCANNNNNNNNNTGG 2 cut(s) 2202, 2252
XmaJI CCTAGG 1 cut(s) 2473
XspI CTAG 4 cut(s) 479, 1161, 1232, 2474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.