AT1G03920

Protein kinase C terminal domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
1001116 .. 1004410
3295 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G03920.1

Sequence Viewer

Length: 1710 bp
ATGGATTCTGCAAGAAGTTGGTTTCACAAGTTTCAACCACGAGATAAGCCTCGGAAAAAGGATATGTTCTCCGGAAGCACTTACGGCGGTGGCGTGACAGAAACCACCGTCCCCGACGGAGGAAATGATACAGAAACGGCAACGAAACTTCCACCACTAGGCGGTGACGGAGAAGCACTCTCAAATTCAACAAAACAGAAAGTTGCTGCAGCCAAACAGTACATTGAGAATCATTATAAGGAACAGATGAAGAACCTCAACGAGAGGAAAGAGAGACGAACAACGTTAGAGAAGAAGCTAGCGGATGCAGATGTATGTGAAGAAGACCAAACCAATCTTATGAAGTTTCTTGAGAAGAAAGAAACAGAGTACATGAGACTCCAAAGGCATAAAATGGGTGCTGATGACTTCGAACTCTTAACTATGATCGGTAAAGGTGCTTTTGGAGAGGTTCGAGTTGTTAGAGAGATCAACACAGGTCATGTTTTTGCTATGAAGAAACTCAAGAAATCAGAAATGCTTCGCAGAGGCCAGGTGGAGCATGTAAGAGCAGAGAGGAATCTATTGGCAGAAGTAGATAGTAACTGTATAGTGAAGCTTTACTGTTCTTTTCAAGACAATGAGTATCTTTATCTGATAATGGAGTATTTGCCCGGTGGCGATATGATGACTCTTCTGATGAGGAAAGACACTTTAAGTGAAGATGAAGCTAAGTTCTATATCGCCGAATCTGTTCTCGCTATAGAATCTATCCATAACCGCAACTATATCCACAGAGACATAAAGCCGGATAACTTGTTGCTTGATAGATATGGACATTTAAGGTTATCTGATTTTGGACTATGTAAGCCATTGGATTGTAGTGTTATTGACGGAGAAGATTTCACGGTAGGAAATGCGGGTAGCGGAGGAGGTTCAGAGAGCGTATCAACCACTCCTAAACGCTCGCAGCAAGAACAGTTGGAACATTGGCAGAAGAATCGAAGAATGCTTGCTTACTCAACCGTTGGTACACCAGACTACATTGCACCTGAAGTCTTGTTAAAGAAAGGATACGGCATGGAATGTGACTGGTGGTCACTAGGAGCTATAATGTACGAAATGCTGGTTGGGTATCCACCCTTTTACGCCGACGACCCAATGTCTACTTGTAGAAAGATAGTGAATTGGAAAACACATTTGAAGTTCCCTGAAGAATCAAGGCTATCACGAGGGGCAAGAGATCTTATTGGTAAGCTCTTGTGTAGCGTTAACCAACGACTAGGCTCTACTGGTGCCTCCCAAATTAAGGCACATCCTTGGTTCGAAGGTGTACAATGGGAAAAGATTTACCAAATGGAAGCTGCGTTCATTCCTGAGGTCAACGACGATTTGGATACTCAAAACTTTGAGAAGTTCGATGAGGAAGATAATCAAACTCAAGCACCTTCTAGAACAGGGCCATGGAGAAAAATGTTATCTTCAAAAGACATAAATTTTGTCGGCTACACATACAAAAACTTTGAAATCGTCAACGATTATCAAGTCCCCGGTATAGCCGAACTAAAAAAGAAAGAGTCAAAATCAAAGAGACCATCGGTTAAGTCACTATTCGAGAGCGAATCAGACTCGTCATCTTCTGGTTCGGAGCAACAGACCATTAACCGGAGCTATTCTAATCCGACGCCTCGTGGAATGGAACCCAACCTGAGACGTCTAGATTCTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

569

Amino Acids

65.03

Weight (kDa)

6.11

Isoelectric Point (pI)

39.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 138 - 285 2e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 138 - 285 1.5e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 332 - 435 1.6e-21 Protein kinase domain
Pkinase_C PF00433 454 - 498 1.6e-09 Protein kinase C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 237
AatII GACGTC 1 cut(s) 1696
AccB1I GGYRCC 1 cut(s) 1274
AccI GTMKAC 1 cut(s) 1145
AccIII TCCGGA 1 cut(s) 71
AciI CCGC 6 cut(s) 87, 162, 302, 760, 899, 906
AclI AACGTT 1 cut(s) 284
AcsI RAATTY 2 cut(s) 184, 1474
AcuI CTGAAG 2 cut(s) 1053, 1212
AcyI GRCGYC 2 cut(s) 1664, 1693
AfaI GTAC 5 cut(s) 221, 371, 1012, 1097, 1314
AfiI CCNNNNNNNGG 5 cut(s) 119, 158, 161, 1288, 1644
AgsI TTSAA 6 cut(s) 35, 189, 614, 1183, 1464, 1505
AhdI GACNNNNNGTC 2 cut(s) 1075, 1141
AjnI CCWGG 1 cut(s) 531
AjuI GAANNNNNNNTTGG 2 cut(s) 1092, 1124
AloI GAACNNNNNNTCC 2 cut(s) 1331, 1363
AluBI AGCT 7 cut(s) 298, 598, 710, 1088, 1237, 1343, 1650
AluI AGCT 7 cut(s) 298, 598, 710, 1088, 1237, 1343, 1650
Alw26I GTCTC 5 cut(s) 268, 370, 771, 1564, 1684
Aor13HI TCCGGA 1 cut(s) 71
AoxI GGCC 2 cut(s) 529, 1439
ApeKI GCWGC 4 cut(s) 206, 209, 949, 1343
ApoI RAATTY 2 cut(s) 184, 1474
ArsI GACNNNNNNTTYG 2 cut(s) 1460, 1492
Asp700I GAANNNNTTC 2 cut(s) 519, 732
AspS9I GGNCC 1 cut(s) 1439
AsuC2I CCSGG 2 cut(s) 654, 1530
AsuHPI GGTGA 1 cut(s) 176
AsuII TTCGAA 2 cut(s) 411, 1305
AsuNHI GCTAGC 1 cut(s) 298
AxyI CCTNAGG 1 cut(s) 1356
BanI GGYRCC 1 cut(s) 1274
BauI CACGAG 3 cut(s) 39, 1209, 1668
BbsI GAAGAC 1 cut(s) 330
BbvI GCAGC 4 cut(s) 193, 221, 961, 1330
BccI CCATC 1 cut(s) 1582
BceAI ACGGC 3 cut(s) 100, 153, 1072
BcgI CGANNNNNNTGC 2 cut(s) 962, 996
BciT130I CCWGG 1 cut(s) 533
BciVI GTATCC 3 cut(s) 1046, 1125, 1369
BcnI CCSGG 2 cut(s) 654, 1530
BcoDI GTCTC 5 cut(s) 268, 370, 771, 1564, 1684
BfaI CTAG 6 cut(s) 158, 299, 1082, 1262, 1431, 1697
BfmI CTRYAG 2 cut(s) 207, 741
BfuI GTATCC 3 cut(s) 1046, 1125, 1369
BglII AGATCT 1 cut(s) 1222
BisI GCNGC 4 cut(s) 207, 210, 950, 1344
BlsI GCNGC 4 cut(s) 208, 211, 951, 1345
Bme1390I CCNGG 3 cut(s) 533, 654, 1530
BmeRI GACNNNNNGTC 2 cut(s) 1075, 1141
BmgT120I GGNCC 1 cut(s) 1439
BmiI GGNNCC 2 cut(s) 1276, 1680
BmrFI CCNGG 3 cut(s) 533, 654, 1530
BmsI GCATC 1 cut(s) 295
BmtI GCTAGC 1 cut(s) 302
BpiI GAAGAC 1 cut(s) 330
BplI GAGNNNNNCTC 2 cut(s) 162, 194
Bpu14I TTCGAA 2 cut(s) 411, 1305
BpuEI CTTGAG 3 cut(s) 371, 488, 1404
BpuMI CCSGG 2 cut(s) 654, 1530
BsaHI GRCGYC 2 cut(s) 1664, 1693
BsaI GGTCTC 1 cut(s) 1564
BsaJI CCNNGG 4 cut(s) 50, 1298, 1442, 1528
BsaWI WCCGGW 2 cut(s) 71, 1644
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 158, 161, 1288, 1644
Bse1I ACTGG 2 cut(s) 1076, 1276
Bse21I CCTNAGG 1 cut(s) 1356
Bse3DI GCAATG 1 cut(s) 1023
BseAI TCCGGA 1 cut(s) 71
BseBI CCWGG 1 cut(s) 533
BseDI CCNNGG 4 cut(s) 50, 1298, 1442, 1528
BseGI GGATG 2 cut(s) 310, 1294
BseLI CCNNNNNNNGG 5 cut(s) 119, 158, 161, 1288, 1644
BseMI GCAATG 1 cut(s) 1023
BseMII CTCAG 3 cut(s) 1347, 1679, 1695
BseNI ACTGG 2 cut(s) 1076, 1276
BseRI GAGGAG 1 cut(s) 924
BseXI GCAGC 4 cut(s) 193, 221, 961, 1330
BshFI GGCC 2 cut(s) 531, 1441
BshNI GGYRCC 1 cut(s) 1274
BsiSI CCGG 5 cut(s) 72, 654, 788, 1530, 1645
BslFI GGGAC 2 cut(s) 95, 1511
BslI CCNNNNNNNGG 5 cut(s) 119, 158, 161, 1288, 1644
BsmAI GTCTC 5 cut(s) 268, 370, 771, 1564, 1684
BsmBI CGTCTC 2 cut(s) 268, 1684
BsmFI GGGAC 2 cut(s) 95, 1511
BsmI GAATGC 1 cut(s) 993
BsnI GGCC 2 cut(s) 531, 1441
Bso31I GGTCTC 1 cut(s) 1564
Bsp119I TTCGAA 2 cut(s) 411, 1305
Bsp13I TCCGGA 1 cut(s) 71
Bsp1407I TGTACA 1 cut(s) 1312
Bsp143I GATC 3 cut(s) 426, 468, 1222
Bsp19I CCATGG 1 cut(s) 1442
BspACI CCGC 6 cut(s) 87, 162, 302, 760, 899, 906
BspANI GGCC 2 cut(s) 531, 1441
BspCNI CTCAG 3 cut(s) 1348, 1680, 1696
BspEI TCCGGA 1 cut(s) 71
BspLI GGNNCC 2 cut(s) 1276, 1680
BspMAI CTGCAG 1 cut(s) 211
BspOI GCTAGC 1 cut(s) 302
BspT104I TTCGAA 2 cut(s) 411, 1305
BspT107I GGYRCC 1 cut(s) 1274
BspTNI GGTCTC 1 cut(s) 1564
BsrDI GCAATG 1 cut(s) 1023
BsrGI TGTACA 1 cut(s) 1312
BsrI ACTGG 2 cut(s) 1076, 1276
BssECI CCNNGG 4 cut(s) 50, 1298, 1442, 1528
BssMI GATC 3 cut(s) 426, 468, 1222
BssNI GRCGYC 2 cut(s) 1664, 1693
BssSI CACGAG 3 cut(s) 39, 1209, 1668
BssT1I CCWWGG 2 cut(s) 1298, 1442
Bst2BI CACGAG 3 cut(s) 39, 1209, 1668
Bst2UI CCWGG 1 cut(s) 533
Bst4CI ACNGT 7 cut(s) 109, 219, 587, 605, 889, 960, 1006
Bst6I CTCTTC 1 cut(s) 678
BstACI GRCGYC 2 cut(s) 1664, 1693
BstAUI TGTACA 1 cut(s) 1312
BstBI TTCGAA 2 cut(s) 411, 1305
BstC8I GCNNGC 3 cut(s) 300, 947, 993
BstDEI CTNAG 4 cut(s) 711, 1356, 1688, 1704
BstDSI CCRYGG 1 cut(s) 1442
BstF5I GGATG 2 cut(s) 310, 1294
BstKTI GATC 3 cut(s) 429, 471, 1225
BstMAI GTCTC 5 cut(s) 268, 370, 771, 1564, 1684
BstMBI GATC 3 cut(s) 426, 468, 1222
BstMWI GCNNNNNNNGC 1 cut(s) 84
BstNI CCWGG 1 cut(s) 533
BstNSI RCATGY 1 cut(s) 545
BstSCI CCNGG 3 cut(s) 531, 652, 1528
BstSFI CTRYAG 2 cut(s) 207, 741
BstV1I GCAGC 4 cut(s) 193, 221, 961, 1330
BstV2I GAAGAC 1 cut(s) 330
BstX2I RGATCY 1 cut(s) 1222
BstYI RGATCY 1 cut(s) 1222
Bsu36I CCTNAGG 1 cut(s) 1356
BsuI GTATCC 3 cut(s) 1046, 1125, 1369
BsuRI GGCC 2 cut(s) 531, 1441
BtgI CCRYGG 1 cut(s) 1442
BtsCI GGATG 2 cut(s) 310, 1294
Cac8I GCNNGC 3 cut(s) 300, 947, 993
Cfr13I GGNCC 1 cut(s) 1439
CseI GACGC 1 cut(s) 1672
Csp6I GTAC 5 cut(s) 220, 370, 1011, 1096, 1313
CviAII CATG 5 cut(s) 373, 482, 542, 1060, 1443
CviQI GTAC 5 cut(s) 220, 370, 1011, 1096, 1313
DdeI CTNAG 4 cut(s) 711, 1356, 1688, 1704
DpnI GATC 3 cut(s) 428, 470, 1224
DpnII GATC 3 cut(s) 426, 468, 1222
DriI GACNNNNNGTC 2 cut(s) 1075, 1141
Eam1104I CTCTTC 1 cut(s) 678
Eam1105I GACNNNNNGTC 2 cut(s) 1075, 1141
EarI CTCTTC 1 cut(s) 678
Eco130I CCWWGG 2 cut(s) 1298, 1442
Eco31I GGTCTC 1 cut(s) 1564
Eco57I CTGAAG 2 cut(s) 1053, 1212
Eco81I CCTNAGG 1 cut(s) 1356
EcoRII CCWGG 1 cut(s) 531
EcoT14I CCWWGG 2 cut(s) 1298, 1442
ErhI CCWWGG 2 cut(s) 1298, 1442
Esp3I CGTCTC 2 cut(s) 268, 1684
FaeI CATG 5 cut(s) 376, 485, 545, 1063, 1446
FaqI GGGAC 2 cut(s) 95, 1511
FatI CATG 5 cut(s) 372, 481, 541, 1059, 1442
FauI CCCGC 1 cut(s) 892
FblI GTMKAC 1 cut(s) 1145
Fnu4HI GCNGC 4 cut(s) 207, 210, 950, 1344
FokI GGATG 2 cut(s) 317, 1281
Fsp4HI GCNGC 4 cut(s) 207, 210, 950, 1344
FspBI CTAG 6 cut(s) 158, 299, 1082, 1262, 1431, 1697
GluI GCNGC 4 cut(s) 207, 210, 950, 1344
HaeIII GGCC 2 cut(s) 531, 1441
HapII CCGG 5 cut(s) 72, 654, 788, 1530, 1645
HgaI GACGC 1 cut(s) 1672
Hin1I GRCGYC 2 cut(s) 1664, 1693
Hin1II CATG 5 cut(s) 376, 485, 545, 1063, 1446
HincII GTYRAC 3 cut(s) 1252, 1363, 1513
HindII GTYRAC 3 cut(s) 1252, 1363, 1513
HindIII AAGCTT 1 cut(s) 596
HpaI GTTAAC 1 cut(s) 1252
HpaII CCGG 5 cut(s) 72, 654, 788, 1530, 1645
HphI GGTGA 1 cut(s) 176
Hpy166II GTNNAC 6 cut(s) 1013, 1146, 1252, 1313, 1363, 1513
Hpy188III TCNNGA 9 cut(s) 72, 350, 505, 614, 1209, 1355, 1431, 1594, 1697
Hpy8I GTNNAC 6 cut(s) 1013, 1146, 1252, 1313, 1363, 1513
Hpy99I CGWCG 4 cut(s) 119, 1136, 1370, 1666
HpyAV CCTTC 2 cut(s) 1301, 1437
HpyCH4III ACNGT 7 cut(s) 109, 219, 587, 605, 889, 960, 1006
HpyCH4IV ACGT 2 cut(s) 284, 1693
HpyCH4V TGCA 4 cut(s) 11, 209, 308, 1028
HpyF10VI GCNNNNNNNGC 1 cut(s) 84
HpyF3I CTNAG 4 cut(s) 711, 1356, 1688, 1704
HpySE526I ACGT 2 cut(s) 284, 1693
Hsp92I GRCGYC 2 cut(s) 1664, 1693
Hsp92II CATG 5 cut(s) 376, 485, 545, 1063, 1446
Kpn2I TCCGGA 1 cut(s) 71
KspAI GTTAAC 1 cut(s) 1252
Kzo9I GATC 3 cut(s) 426, 468, 1222
LmnI GCTCC 4 cut(s) 538, 1085, 1627, 1647
Lsp1109I GCAGC 4 cut(s) 193, 221, 961, 1330
LweI GCATC 1 cut(s) 295
MaeI CTAG 6 cut(s) 158, 299, 1082, 1262, 1431, 1697
MaeII ACGT 2 cut(s) 284, 1693
MaeIII GTNAC 6 cut(s) 94, 164, 581, 1067, 1077, 1584
MalI GATC 3 cut(s) 428, 470, 1224
MboI GATC 3 cut(s) 426, 468, 1222
MflI RGATCY 1 cut(s) 1222
MluCI AATT 4 cut(s) 184, 1165, 1284, 1474
MlyI GAGTC 4 cut(s) 372, 664, 1565, 1601
MmeI TCCRAC 2 cut(s) 942, 1685
MroI TCCGGA 1 cut(s) 71
MroXI GAANNNNTTC 2 cut(s) 519, 732
MseI TTAA 8 cut(s) 419, 695, 821, 1043, 1251, 1287, 1581, 1641
MspI CCGG 5 cut(s) 72, 654, 788, 1530, 1645
MspR9I CCNGG 3 cut(s) 533, 654, 1530
Mva1269I GAATGC 1 cut(s) 993
MvaI CCWGG 1 cut(s) 533
MwoI GCNNNNNNNGC 1 cut(s) 84
NciI CCSGG 2 cut(s) 654, 1530
NcoI CCATGG 1 cut(s) 1442
NdeII GATC 3 cut(s) 426, 468, 1222
NheI GCTAGC 1 cut(s) 298
NlaIII CATG 5 cut(s) 376, 485, 545, 1063, 1446
NlaIV GGNNCC 2 cut(s) 1276, 1680
NmuCI GTSAC 5 cut(s) 94, 164, 1067, 1077, 1584
NspI RCATGY 1 cut(s) 545
NspV TTCGAA 2 cut(s) 411, 1305
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PctI GAATGC 1 cut(s) 993
PdmI GAANNNNTTC 2 cut(s) 519, 732
PfeI GAWTC 9 cut(s) 5, 229, 559, 728, 746, 979, 1196, 1601, 1700
PkrI GCNGC 4 cut(s) 208, 211, 951, 1345
PleI GAGTC 4 cut(s) 372, 664, 1564, 1601
PpsI GAGTC 4 cut(s) 372, 664, 1564, 1601
PsiI TTATAA 1 cut(s) 237
Psp1406I AACGTT 1 cut(s) 284
Psp6I CCWGG 1 cut(s) 531
PspGI CCWGG 1 cut(s) 531
PspN4I GGNNCC 2 cut(s) 1276, 1680
PspPI GGNCC 1 cut(s) 1439
PstI CTGCAG 1 cut(s) 211
PsuI RGATCY 1 cut(s) 1222
RsaI GTAC 5 cut(s) 221, 371, 1012, 1097, 1314
RsaNI GTAC 5 cut(s) 220, 370, 1011, 1096, 1313
SaqAI TTAA 8 cut(s) 419, 695, 821, 1043, 1251, 1287, 1581, 1641
SatI GCNGC 4 cut(s) 207, 210, 950, 1344
Sau3AI GATC 3 cut(s) 426, 468, 1222
Sau96I GGNCC 1 cut(s) 1439
SchI GAGTC 4 cut(s) 372, 664, 1565, 1601
ScrFI CCNGG 3 cut(s) 533, 654, 1530
SfaNI GCATC 1 cut(s) 295
SfcI CTRYAG 2 cut(s) 207, 741
SfuI TTCGAA 2 cut(s) 411, 1305
SmlI CTYRAG 3 cut(s) 350, 503, 1419
SmoI CTYRAG 3 cut(s) 350, 503, 1419
Sse9I AATT 4 cut(s) 184, 1165, 1284, 1474
SsiI CCGC 6 cut(s) 87, 162, 302, 760, 899, 906
SspMI CTAG 6 cut(s) 158, 299, 1082, 1262, 1431, 1697
StyD4I CCNGG 3 cut(s) 531, 652, 1528
StyI CCWWGG 2 cut(s) 1298, 1442
TaaI ACNGT 7 cut(s) 109, 219, 587, 605, 889, 960, 1006
TaiI ACGT 2 cut(s) 287, 1696
TaqI TCGA 6 cut(s) 411, 454, 982, 1305, 1398, 1593
TasI AATT 4 cut(s) 184, 1165, 1284, 1474
TatI WGTACW 3 cut(s) 219, 369, 1312
TfiI GAWTC 9 cut(s) 5, 229, 559, 728, 746, 979, 1196, 1601, 1700
Tru1I TTAA 8 cut(s) 419, 695, 821, 1043, 1251, 1287, 1581, 1641
Tru9I TTAA 8 cut(s) 419, 695, 821, 1043, 1251, 1287, 1581, 1641
TseFI GTSAC 5 cut(s) 94, 164, 1067, 1077, 1584
TseI GCWGC 4 cut(s) 206, 209, 949, 1343
Tsp45I GTSAC 5 cut(s) 94, 164, 1067, 1077, 1584
TspDTI ATGAA 5 cut(s) 263, 356, 509, 720, 1339
TspGWI ACGGA 3 cut(s) 132, 183, 888
XapI RAATTY 2 cut(s) 184, 1474
XbaI TCTAGA 2 cut(s) 1430, 1696
XceI RCATGY 1 cut(s) 545
XmiI GTMKAC 1 cut(s) 1145
XmnI GAANNNNTTC 2 cut(s) 519, 732
XspI CTAG 6 cut(s) 158, 299, 1082, 1262, 1431, 1697
ZraI GACGTC 1 cut(s) 1694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.