pycom05g18170

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0001303
Physical Location & Seq
Reverse (-)
21162164 .. 21164869
2706 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g18170.8

Sequence Viewer

Length: 1269 bp
ATGTGTCTCCCTCTATGGCTGGGGATTGAGAAATTCACGTTGCGAGTTTGGCATGGTGGTGGGCTGCATTGCGAGCAGGAGGAAATGGATTCGGCACGGAGTTGGCTGTCGAAGCTTCAGCCGCGTGAAAAGCTGAGGAGCTCGACGAGGAGGAAGGAGCCGTGCGCCGGCGGCGATGTAGGCGGAGAAGAGTCGAATATGGATGAGGAGGCGCTTTCCAATGTCACGAAGCAGAAGGCTGCAGCGGCGAAGCAGTATATTGAGAACCATTACAAGGAGCAAATGAAGAATCTCCAGGAGCGGAAGGAACGACGAAACATGTTAGAGAAAAAGTTGGCTGATGCCGACGTCTCTGAGGAAGATCAAAACAACCTTCTCAAGTTTCTTGAGAAGAAAGAAACCGAATACATGCGCCTTCAGAGGCATAAAATGGGTGTTGATGATTTCGAGCTGTTGACTATGATCGGCAAGGGCGCATTTGGTGAGGTTCGTGTATGCAGGGAAAAGACGTCTGGTTCTGTATATGCCATGAAAAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAGCATGTCAAGGCGGAAAGGAACTTACTTGCTGAGGTGGACAGCAATTGCATTGTCAAGCTGTACTGTTCATTTCAAGATGATGACTATCTTTATCTTATAATGGAATACTTACCTGGAGGAGATATGATGACATTGCTCATGAGAAAGGATATTTTGACTGAAGAGGAAGCTAGATTTTATGTTGCCGAAACAGTTTTGGCAATTGAGTCTATCCATAAACACAATTACATTCATAGGGATATTAAGCCTGACAATTTGCTACTCGATAGATATGGACACTTGAGACTGTCAGATTTTGGGTTGTGTAAACCTTTAGACTGCAGTACAATCCGAGAAGACTTTTCAGTAGCACCCAACGCTAATGGTGCTGCACAGAATGATGAACGTCCTGCAGCTCCAAAACGAACACAACAAGAGCAACTGCAACATTGGCAGAAGAATAGGAGAATGCTCGCTTATTCCACTGTTGGTACACCTGACTATATTGCTCCAGAAGTTCTGTTGAAAAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGTGCTATTATGTATGAAATGCTTGTGGGTTACCCGCCCTTCTATTCTGATCGATCCAATGTCAACATGCAGGAAGATTGTAAACTGGAAAACGCATTTGAAATTTCCAGAAGAAGCAAGGCTGTCTCCAGAAGCGAAAGATCTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_C

Protein Analysis

423

Amino Acids

48.98

Weight (kDa)

6.42

Isoelectric Point (pI)

57.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 674
AatII GACGTC 2 cut(s) 351, 512
AccBSI CCGCTC 1 cut(s) 301
AccII CGCG 1 cut(s) 124
AciI CCGC 7 cut(s) 122, 171, 183, 245, 301, 587, 1154
AclWI GGATC 1 cut(s) 1167
AcsI RAATTY 2 cut(s) 32, 1221
AcuI CTGAAG 3 cut(s) 101, 401, 756
AcyI GRCGYC 2 cut(s) 348, 509
AdeI CACNNNGTG 1 cut(s) 1121
AfaI GTAC 3 cut(s) 638, 901, 1048
AfiI CCNNNNNNNGG 2 cut(s) 167, 274
AflII CTTAAG 1 cut(s) 539
AflIII ACRYGT 1 cut(s) 318
AgsI TTSAA 3 cut(s) 650, 1081, 1220
AjnI CCWGG 3 cut(s) 294, 567, 688
AluBI AGCT 8 cut(s) 115, 133, 141, 451, 538, 634, 746, 971
AluI AGCT 8 cut(s) 115, 133, 141, 451, 538, 634, 746, 971
Alw21I GWGCWC 1 cut(s) 143
Alw26I GTCTC 4 cut(s) 11, 355, 853, 1249
AlwI GGATC 1 cut(s) 1167
AoxI GGCC 1 cut(s) 565
ApeKI GCWGC 5 cut(s) 64, 239, 242, 944, 968
ApoI RAATTY 2 cut(s) 32, 1221
AspLEI GCGC 4 cut(s) 167, 214, 414, 476
AsuHPI GGTGA 1 cut(s) 494
BanII GRGCYC 1 cut(s) 143
BbsI GAAGAC 1 cut(s) 918
Bbv12I GWGCWC 1 cut(s) 143
BbvCI CCTCAGC 2 cut(s) 134, 606
BbvI GCAGC 5 cut(s) 51, 226, 254, 931, 980
BccI CCATC 1 cut(s) 1090
BceAI ACGGC 1 cut(s) 145
BciT130I CCWGG 3 cut(s) 296, 569, 690
BcoDI GTCTC 4 cut(s) 11, 355, 853, 1249
BfaI CTAG 1 cut(s) 747
BfmI CTRYAG 3 cut(s) 240, 895, 966
BfoI RGCGCY 1 cut(s) 215
BfrI CTTAAG 1 cut(s) 539
BglII AGATCT 1 cut(s) 1259
BisI GCNGC 8 cut(s) 65, 122, 172, 240, 243, 246, 945, 969
BlsI GCNGC 8 cut(s) 66, 123, 173, 241, 244, 247, 946, 970
Bme1390I CCNGG 3 cut(s) 296, 569, 690
BmiI GGNNCC 1 cut(s) 159
BmrFI CCNGG 3 cut(s) 296, 569, 690
BmsI GCATC 2 cut(s) 331, 543
BpiI GAAGAC 1 cut(s) 918
BpmI CTGGAG 4 cut(s) 278, 711, 1050, 1231
Bpu10I CCTNAGC 2 cut(s) 134, 606
BpuEI CTTGAG 3 cut(s) 362, 407, 877
Bsa29I ATCGAT 1 cut(s) 1171
BsaBI GATNNNNATC 1 cut(s) 660
BsaHI GRCGYC 2 cut(s) 348, 509
Bsc4I CCNNNNNNNGG 2 cut(s) 167, 274
Bse118I RCCGGY 1 cut(s) 167
Bse1I ACTGG 1 cut(s) 1209
Bse3DI GCAATG 2 cut(s) 67, 707
Bse8I GATNNNNATC 1 cut(s) 660
BseBI CCWGG 3 cut(s) 296, 569, 690
BseCI ATCGAT 1 cut(s) 1171
BseGI GGATG 2 cut(s) 208, 1101
BseJI GATNNNNATC 1 cut(s) 660
BseLI CCNNNNNNNGG 2 cut(s) 167, 274
BseMI GCAATG 2 cut(s) 67, 707
BseMII CTCAG 3 cut(s) 125, 345, 597
BseNI ACTGG 1 cut(s) 1209
BseRI GAGGAG 4 cut(s) 151, 163, 221, 708
BseXI GCAGC 5 cut(s) 51, 226, 254, 931, 980
BseYI CCCAGC 1 cut(s) 19
BsgI GTGCAG 1 cut(s) 930
Bsh1236I CGCG 1 cut(s) 124
BshFI GGCC 1 cut(s) 567
BshVI ATCGAT 1 cut(s) 1171
BsiHKAI GWGCWC 1 cut(s) 143
BsiSI CCGG 1 cut(s) 168
BslI CCNNNNNNNGG 2 cut(s) 167, 274
BsmAI GTCTC 4 cut(s) 11, 355, 853, 1249
BsmBI CGTCTC 1 cut(s) 355
BsmI GAATGC 1 cut(s) 1029
BsnI GGCC 1 cut(s) 567
Bsp1286I GDGCHC 1 cut(s) 143
Bsp143I GATC 5 cut(s) 361, 462, 1168, 1172, 1259
BspACI CCGC 7 cut(s) 122, 171, 183, 245, 301, 587, 1154
BspANI GGCC 1 cut(s) 567
BspCNI CTCAG 3 cut(s) 126, 346, 598
BspDI ATCGAT 1 cut(s) 1171
BspFNI CGCG 1 cut(s) 124
BspHI TCATGA 1 cut(s) 714
BspLI GGNNCC 1 cut(s) 159
BspMAI CTGCAG 3 cut(s) 244, 899, 970
BspPI GGATC 1 cut(s) 1167
BspTI CTTAAG 1 cut(s) 539
BsrBI CCGCTC 1 cut(s) 301
BsrDI GCAATG 2 cut(s) 67, 707
BsrFI RCCGGY 1 cut(s) 167
BsrI ACTGG 1 cut(s) 1209
BssAI RCCGGY 1 cut(s) 167
BssMI GATC 5 cut(s) 361, 462, 1168, 1172, 1259
BssNI GRCGYC 2 cut(s) 348, 509
Bst2UI CCWGG 3 cut(s) 296, 569, 690
Bst4CI ACNGT 4 cut(s) 641, 769, 864, 1042
Bst6I CTCTTC 2 cut(s) 183, 732
BstACI GRCGYC 2 cut(s) 348, 509
BstAFI CTTAAG 1 cut(s) 539
BstC8I GCNNGC 3 cut(s) 74, 169, 1029
BstDEI CTNAG 3 cut(s) 134, 354, 606
BstEII GGTNACC 1 cut(s) 1148
BstF5I GGATG 2 cut(s) 208, 1101
BstFNI CGCG 1 cut(s) 124
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 4 cut(s) 167, 214, 414, 476
BstKTI GATC 5 cut(s) 364, 465, 1171, 1175, 1262
BstMAI GTCTC 4 cut(s) 11, 355, 853, 1249
BstMBI GATC 5 cut(s) 361, 462, 1168, 1172, 1259
BstNI CCWGG 3 cut(s) 296, 569, 690
BstNSI RCATGY 4 cut(s) 322, 412, 581, 1189
BstPI GGTNACC 1 cut(s) 1148
BstSCI CCNGG 3 cut(s) 294, 567, 688
BstSFI CTRYAG 3 cut(s) 240, 895, 966
BstUI CGCG 1 cut(s) 124
BstV1I GCAGC 5 cut(s) 51, 226, 254, 931, 980
BstV2I GAAGAC 1 cut(s) 918
BstX2I RGATCY 1 cut(s) 1259
BstYI RGATCY 1 cut(s) 1259
Bsu15I ATCGAT 1 cut(s) 1171
BsuRI GGCC 1 cut(s) 567
BsuTUI ATCGAT 1 cut(s) 1171
BtgZI GCGATG 1 cut(s) 189
BtsCI GGATG 2 cut(s) 208, 1101
BtsIMutI CAGTG 1 cut(s) 1038
Cac8I GCNNGC 3 cut(s) 74, 169, 1029
CciI TCATGA 1 cut(s) 714
CfoI GCGC 4 cut(s) 167, 214, 414, 476
Cfr10I RCCGGY 1 cut(s) 167
ClaI ATCGAT 1 cut(s) 1171
Csp6I GTAC 3 cut(s) 637, 900, 1047
CviAII CATG 7 cut(s) 53, 319, 409, 529, 578, 715, 1186
CviQI GTAC 3 cut(s) 637, 900, 1047
DdeI CTNAG 3 cut(s) 134, 354, 606
DpnI GATC 5 cut(s) 363, 464, 1170, 1174, 1261
DpnII GATC 5 cut(s) 361, 462, 1168, 1172, 1259
DraIII CACNNNGTG 1 cut(s) 1121
Eam1104I CTCTTC 2 cut(s) 183, 732
EarI CTCTTC 2 cut(s) 183, 732
EciI GGCGGA 2 cut(s) 198, 602
Ecl136II GAGCTC 1 cut(s) 141
Eco24I GRGCYC 1 cut(s) 143
Eco53kI GAGCTC 1 cut(s) 141
Eco57I CTGAAG 3 cut(s) 101, 401, 756
Eco91I GGTNACC 1 cut(s) 1148
EcoICRI GAGCTC 1 cut(s) 141
EcoO65I GGTNACC 1 cut(s) 1148
EcoRII CCWGG 3 cut(s) 294, 567, 688
EcoT38I GRGCYC 1 cut(s) 143
Esp3I CGTCTC 1 cut(s) 355
FaeI CATG 7 cut(s) 56, 322, 412, 532, 581, 718, 1189
FatI CATG 7 cut(s) 52, 318, 408, 528, 577, 714, 1185
FauI CCCGC 1 cut(s) 1161
Fnu4HI GCNGC 8 cut(s) 65, 122, 172, 240, 243, 246, 945, 969
FokI GGATG 2 cut(s) 215, 1108
FriOI GRGCYC 1 cut(s) 143
Fsp4HI GCNGC 8 cut(s) 65, 122, 172, 240, 243, 246, 945, 969
FspBI CTAG 1 cut(s) 747
GlaI GCGC 4 cut(s) 166, 213, 413, 475
GluI GCNGC 8 cut(s) 65, 122, 172, 240, 243, 246, 945, 969
GsaI CCCAGC 1 cut(s) 23
GsuI CTGGAG 4 cut(s) 278, 711, 1050, 1231
HaeII RGCGCY 1 cut(s) 215
HaeIII GGCC 1 cut(s) 567
HapII CCGG 1 cut(s) 168
HhaI GCGC 4 cut(s) 167, 214, 414, 476
Hin1I GRCGYC 2 cut(s) 348, 509
Hin1II CATG 7 cut(s) 56, 322, 412, 532, 581, 718, 1189
Hin6I GCGC 4 cut(s) 165, 212, 412, 474
HinP1I GCGC 4 cut(s) 165, 212, 412, 474
HincII GTYRAC 2 cut(s) 456, 1183
HindII GTYRAC 2 cut(s) 456, 1183
HindIII AAGCTT 2 cut(s) 113, 536
HinfI GANTC 4 cut(s) 89, 191, 289, 782
HpaII CCGG 1 cut(s) 168
HphI GGTGA 1 cut(s) 494
Hpy166II GTNNAC 6 cut(s) 456, 613, 884, 1049, 1183, 1202
Hpy188I TCNGA 6 cut(s) 355, 420, 550, 868, 908, 1168
Hpy188III TCNNGA 7 cut(s) 226, 386, 650, 715, 1067, 1227, 1248
Hpy8I GTNNAC 6 cut(s) 456, 613, 884, 1049, 1183, 1202
Hpy99I CGWCG 3 cut(s) 148, 315, 350
HpyAV CCTTC 6 cut(s) 148, 229, 298, 383, 425, 1168
HpyCH4III ACNGT 4 cut(s) 641, 769, 864, 1042
HpyCH4IV ACGT 4 cut(s) 38, 348, 509, 961
HpyCH4V TGCA 9 cut(s) 67, 242, 498, 624, 897, 947, 968, 1000, 1189
HpyF3I CTNAG 3 cut(s) 134, 354, 606
HpySE526I ACGT 4 cut(s) 38, 348, 509, 961
Hsp92I GRCGYC 2 cut(s) 348, 509
Hsp92II CATG 7 cut(s) 56, 322, 412, 532, 581, 718, 1189
HspAI GCGC 4 cut(s) 165, 212, 412, 474
KroI GCCGGC 1 cut(s) 167
KroNI GCCGGC 1 cut(s) 169
Kzo9I GATC 5 cut(s) 361, 462, 1168, 1172, 1259
LmnI GCTCC 6 cut(s) 138, 157, 277, 298, 976, 1069
Lsp1109I GCAGC 5 cut(s) 51, 226, 254, 931, 980
LweI GCATC 2 cut(s) 331, 543
MaeI CTAG 1 cut(s) 747
MaeII ACGT 4 cut(s) 38, 348, 509, 961
MaeIII GTNAC 3 cut(s) 223, 1113, 1148
MalI GATC 5 cut(s) 363, 464, 1170, 1174, 1261
MbiI CCGCTC 1 cut(s) 301
MboI GATC 5 cut(s) 361, 462, 1168, 1172, 1259
MboII GAAGA 9 cut(s) 200, 298, 371, 403, 749, 923, 1024, 1205, 1242
MfeI CAATTG 2 cut(s) 619, 777
MflI RGATCY 1 cut(s) 1259
MhlI GDGCHC 1 cut(s) 143
MluCI AATT 6 cut(s) 32, 619, 777, 799, 829, 1221
MlyI GAGTC 2 cut(s) 200, 791
MreI CGCCGGCG 1 cut(s) 167
MroNI GCCGGC 1 cut(s) 167
MseI TTAA 2 cut(s) 540, 819
MslI CAYNNNNRTG 1 cut(s) 57
MspA1I CMGCKG 1 cut(s) 245
MspCI CTTAAG 1 cut(s) 539
MspI CCGG 1 cut(s) 168
MspR9I CCNGG 3 cut(s) 296, 569, 690
MunI CAATTG 2 cut(s) 619, 777
Mva1269I GAATGC 1 cut(s) 1029
MvaI CCWGG 3 cut(s) 296, 569, 690
MvnI CGCG 1 cut(s) 124
NaeI GCCGGC 1 cut(s) 169
NdeII GATC 5 cut(s) 361, 462, 1168, 1172, 1259
NgoMIV GCCGGC 1 cut(s) 167
NlaIII CATG 7 cut(s) 56, 322, 412, 532, 581, 718, 1189
NlaIV GGNNCC 1 cut(s) 159
NmuCI GTSAC 2 cut(s) 223, 1113
NspI RCATGY 4 cut(s) 322, 412, 581, 1189
PagI TCATGA 1 cut(s) 714
PciI ACATGT 1 cut(s) 318
PctI GAATGC 1 cut(s) 1029
PdiI GCCGGC 1 cut(s) 169
PfeI GAWTC 2 cut(s) 89, 289
PfoI TCCNGGA 1 cut(s) 294
PkrI GCNGC 8 cut(s) 66, 123, 173, 241, 244, 247, 946, 970
PleI GAGTC 2 cut(s) 199, 790
PpsI GAGTC 2 cut(s) 199, 790
PscI ACATGT 1 cut(s) 318
PsiI TTATAA 1 cut(s) 674
Psp124BI GAGCTC 1 cut(s) 143
Psp6I CCWGG 3 cut(s) 294, 567, 688
PspEI GGTNACC 1 cut(s) 1148
PspFI CCCAGC 1 cut(s) 19
PspGI CCWGG 3 cut(s) 294, 567, 688
PspN4I GGNNCC 1 cut(s) 159
PstI CTGCAG 3 cut(s) 244, 899, 970
PsuI RGATCY 1 cut(s) 1259
RsaI GTAC 3 cut(s) 638, 901, 1048
RsaNI GTAC 3 cut(s) 637, 900, 1047
RseI CAYNNNNRTG 1 cut(s) 57
SacI GAGCTC 1 cut(s) 143
SaqAI TTAA 2 cut(s) 540, 819
SatI GCNGC 8 cut(s) 65, 122, 172, 240, 243, 246, 945, 969
Sau3AI GATC 5 cut(s) 361, 462, 1168, 1172, 1259
SchI GAGTC 2 cut(s) 200, 791
ScrFI CCNGG 3 cut(s) 296, 569, 690
SduI GDGCHC 1 cut(s) 143
SfaNI GCATC 2 cut(s) 331, 543
SfcI CTRYAG 3 cut(s) 240, 895, 966
SgrAI CRCCGGYG 1 cut(s) 167
SmiMI CAYNNNNRTG 1 cut(s) 57
SmlI CTYRAG 4 cut(s) 377, 386, 539, 856
SmoI CTYRAG 4 cut(s) 377, 386, 539, 856
Sse9I AATT 6 cut(s) 32, 619, 777, 799, 829, 1221
SsiI CCGC 7 cut(s) 122, 171, 183, 245, 301, 587, 1154
SspMI CTAG 1 cut(s) 747
SstI GAGCTC 1 cut(s) 143
StyD4I CCNGG 3 cut(s) 294, 567, 688
TaaI ACNGT 4 cut(s) 641, 769, 864, 1042
TaiI ACGT 4 cut(s) 41, 351, 512, 964
TaqI TCGA 6 cut(s) 110, 143, 194, 447, 840, 1171
TasI AATT 6 cut(s) 32, 619, 777, 799, 829, 1221
TatI WGTACW 2 cut(s) 636, 899
TauI GCSGC 3 cut(s) 124, 174, 248
TfiI GAWTC 2 cut(s) 89, 289
Tru1I TTAA 2 cut(s) 540, 819
Tru9I TTAA 2 cut(s) 540, 819
TscAI CASTG 1 cut(s) 1045
TseFI GTSAC 2 cut(s) 223, 1113
TseI GCWGC 5 cut(s) 64, 239, 242, 944, 968
Tsp45I GTSAC 2 cut(s) 223, 1113
TspDTI ATGAA 6 cut(s) 299, 545, 633, 797, 972, 1149
TspGWI ACGGA 1 cut(s) 112
TspRI CASTG 1 cut(s) 1045
Vha464I CTTAAG 1 cut(s) 539
XapI RAATTY 2 cut(s) 32, 1221
XceI RCATGY 4 cut(s) 322, 412, 581, 1189
XspI CTAG 1 cut(s) 747
ZraI GACGTC 2 cut(s) 349, 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.