Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011873

Physical Location & Seq

Genomic Coordinates Forward (+)

1922208 .. 1926278

Gene Structure 4071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G06290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGTCGGATAATCGTGCACTCCGACGAGCTCATGTTCTCGCCAATCACATACTCCAATCAAATCCTCCATCTTCGAACCCGTCCCTGTCGCGCGAGTTATGTTTGCAGTACTCTCCACCGGAGCTCAACGAGAGCTATGGATTCGATGTCAAGGAGATGAGAAAATTACTTGACGGACACAACGTGGTGGATCGGGACTGGATTTATGGACTCATGATGCAGAGCAATCTGTTTAATCGGAAGGAGAGAGGAGGTAAGATTTTCGTGTCGCCGGATTACAATCAGACGATGGAGCAGCAGCGTGAGATCACAATGAAACGGATCTGGTACTTGCTTGAGAATGGGGTTTTCAAAGGATGGTTGACGGAGACAGGTCCTGAGGCCGAGCTCAGGAAATTAGCTCTGCTTGAGGTTTGCGGGATTTATGATCACTCCGTCTCCATCAAAGTTGGTGTGCATTTCTTCCTGTGGGGTAATGCTGTAAAGTTTTTTGGAACAAAGCGTCACCATGAAAAGTGGCTGAAGAACACCGAAGATTATGTTGTCAAGGGCTGTTTTGCTATGACTGAGCTAGGCCATGGAAGTAATGTACGGGGAATTGAAACAGTGACAACTTATGACCCAAAAACTGAAGAGTTTGTGATAAATACTCCTTGTGAATCTGCTCAGAAGTATTGGATTGGTGGGGCAGCTAATCATGCAACCCACACAATTGTGTTTTCACAGCTTCATATCAACGGAACCAACCAGGGGGTCCATGCCTTTATCGCCCAAATCAGGGATCAAGATGGCAGCATATGTCCAAATATCCGCATTGCTGACTGTGGACACAAAATTGGTCTAAATGGTGTTGACAATGGCCGGATCTGGTTTGATAATCTTCGAATTCCAAGAGAGAATTTGTTGAATGCAGTTGCTGATGTTTCGTCTGATGGGAAGTATGTTAGCTCAATTAAAGATCCTGATCAGAGATTTGGAGCATTCATGGCCCCTTTGACTTCTGGCCGAGTCACAATTGCATCAAGTGCAATTTATTCTGCAAAGGTCGGATTATCTATTGCTATAAGGTACTCATTATCGAGAAGAGCCTTCTCTGTTACAGCTAATGGTCCTGAAGTCCTCCTCCTTGATTACCCAAGCCATCAAAGGCGACTGCTACCACTCCTAGCAAAGACATATGCTATGAGTTTTGCTGCAAATGAATTGAAGATGATTTACGTGAAGAGAACACCGGAGACCAACAAAGCCATCCACGTTGTTTCAAGTGGGTTCAAAGCTGTTCTCACCTGGCACAATATGCACACACTTCAGGAATGTCGAGAAGCTGTCGGAGGGCAAGGTGTGAAAACAGAAAATCTAGTTGGTCAGTTGAAAGGTGAATTTGATGTGCAGACTACATTTGAGGGTGACAATAATGTATTGATGCAGCAGGTGAGCAAGGCGCTTTTCGCTGAATATGTATCGTGTAAGAAGAGAAACAAACCTTTCAAGGGACTGGGATTGGAGCACATGAACAGTCCACGTCCTGTATTACCGACTCAACTCACATCATCAACCCTCAGATGCAGCCAATTCCAGACAAATGTGTTCTGCTTAAGAGAGCGAGATCTTCTGGAGCAATTTACTTCTGAAGTTGCACAGCTTCAAGGGAGAGGAGAAAGTCGAGAATTCTCTTTCCTCCTGAGTCATCAACTTGCTGAAGACTTAGGTAAAGCTTTCACAGAGAAAGCAATACTTCAAACCATTTTGGATGCTGAGGCAAAACTACCTACTGGCTCAGTAAAGGATGTGTTGGGTCTTGTAAGATCAATGTACGCATTGATCAGCTTGGAAGAAGATCCATCGTTGCTGCGATATGGTTACCTATCTCAGGATAATGTTGGAGATGTGAGGAGAGAAGTTTCAAAGCTCTGTGGAGAGCTTAGACCACACGCGCTTGCACTCGTCACTTCATTCGGCATTCCAGACTCCTTCTTGAGTCCAATTGCATTCAACTGGGTCGAAGCCAATGCTTGGTCTTCAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0050660 GO:0050662 GO:0051791 GO:0055114 GO:0071704 GO:0072329 GO:0097159 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_1 Acyl-CoA_dh_M

Protein Analysis

675

Amino Acids

75.68

Weight (kDa)

8.17

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyl-CoA_dh_M	PF02770	185 - 293	7.1e-12	Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1	PF00441	326 - 482	6.3e-10	Acyl-CoA dehydrogenase, C-terminal domain
ACOX_C_alpha1	PF22924	332 - 482	1.3e-39	Acyl-CoA oxidase, C-alpha1 domain
ACOX	PF01756	528 - 659	2.7e-15	Acyl-CoA oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06290 AT1G06310 AT3G06690
fragaria_vesca	FvH4_6g26900 FvH4_6g26900 FvH4_6g26900
malus_domestica	MD17G1234100.v1.1
prunus_persica	Prupe.3G127000_v2.0.a1
pyrus_communis	pycom17g23740
rosa_chinensis	RchiOBHm_Chr2g0128641
rosa_laevigata	RLG00000019014
rosa_multiflora	Rmu_sc0000837.1_g000086 Rmu_sc0003465.1_g000047
rosa_roxburghii	Rroxscaffold_2G00115420 Rroxscaffold_2G00115900
rosa_rugosa	Rorug02G0279600
rosa_samantha	Rh2DG357400
rosa_wichuraiana	Rw2G026890 Rw2G027150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1420
Acc36I	ACCTGC	1 cut(s)	1420
AccB7I	CCANNNNNTGG	1 cut(s)	2013
AccII	CGCG	3 cut(s)	91, 93, 1934
AciI	CCGC	2 cut(s)	417, 811
AclWI	GGATC	6 cut(s)	198, 329, 789, 872, 953, 1832
AcoI	YGGCCR	2 cut(s)	859, 1003
AcsI	RAATTY	4 cut(s)	885, 898, 1379, 1667
AcuI	CTGAAG	7 cut(s)	542, 651, 1134, 1292, 1650, 1719, 2004
AdeI	CACNNNGTG	1 cut(s)	184
AfaI	GTAC	5 cut(s)	110, 329, 591, 1070, 1814
AfiI	CCNNNNNNNGG	7 cut(s)	390, 750, 777, 778, 1490, 1870, 2013
AflII	CTTAAG	1 cut(s)	1594
AjiI	CACGTC	1 cut(s)	1523
AjnI	CCWGG	2 cut(s)	747, 1286
AjuI	GAANNNNNNNTTGG	2 cut(s)	1344, 1376
AleI	CACNNNNGTG	1 cut(s)	713
Alw21I	GWGCWC	5 cut(s)	19, 31, 126, 390, 1509
Alw26I	GTCTC	3 cut(s)	362, 442, 1229
Alw44I	GTGCAC	1 cut(s)	15
AlwI	GGATC	6 cut(s)	198, 329, 789, 872, 953, 1832
AlwNI	CAGNNNCTG	2 cut(s)	377, 917
AoxI	GGCC	5 cut(s)	381, 574, 859, 987, 1003
ApaLI	GTGCAC	1 cut(s)	15
ApeKI	GCWGC	8 cut(s)	295, 298, 689, 792, 1193, 1426, 1566, 1849
ApoI	RAATTY	4 cut(s)	885, 898, 1379, 1667
AspLEI	GCGC	3 cut(s)	93, 1444, 1936
AspS9I	GGNCC	4 cut(s)	374, 754, 988, 1109
AsuHPI	GGTGA	5 cut(s)	497, 1276, 1388, 1418, 1444
AsuII	TTCGAA	2 cut(s)	74, 883
AvaII	GGWCC	3 cut(s)	374, 754, 1109
AxyI	CCTNAGG	1 cut(s)	378
BaeGI	GKGCMC	1 cut(s)	19
BanII	GRGCYC	3 cut(s)	31, 126, 390
BarI	GAAGNNNNNNTAC	2 cut(s)	1199, 1231
BbsI	GAAGAC	2 cut(s)	1707, 2010
Bbv12I	GWGCWC	5 cut(s)	19, 31, 126, 390, 1509
BbvCI	CCTCAGC	1 cut(s)	1755
BbvI	GCAGC	8 cut(s)	307, 310, 701, 804, 1180, 1438, 1578, 1836
BccI	CCATC	9 cut(s)	76, 283, 351, 449, 782, 926, 1149, 1256, 1849
BcgI	CGANNNNNNTGC	2 cut(s)	1991, 2025
BciT130I	CCWGG	2 cut(s)	749, 1288
BclI	TGATCA	3 cut(s)	427, 964, 1821
BcoDI	GTCTC	3 cut(s)	362, 442, 1229
BfaI	CTAG	3 cut(s)	572, 1166, 1358
BfoI	RGCGCY	1 cut(s)	1445
BfrI	CTTAAG	1 cut(s)	1594
BfuAI	ACCTGC	1 cut(s)	1420
BglII	AGATCT	1 cut(s)	1606
BisI	GCNGC	8 cut(s)	296, 299, 690, 793, 1194, 1427, 1567, 1850
BlsI	GCNGC	8 cut(s)	297, 300, 691, 794, 1195, 1428, 1568, 1851
BmcAI	AGTACT	1 cut(s)	110
Bme1390I	CCNGG	2 cut(s)	749, 1288
Bme18I	GGWCC	3 cut(s)	374, 754, 1109
BmgBI	CACGTC	1 cut(s)	1523
BmgT120I	GGNCC	4 cut(s)	374, 754, 988, 1109
BmiI	GGNNCC	3 cut(s)	742, 755, 990
BmrFI	CCNGG	2 cut(s)	749, 1288
BmrI	ACTGGG	2 cut(s)	1505, 2005
BmsI	GCATC	5 cut(s)	207, 1028, 1413, 1553, 1741
BmuI	ACTGGG	2 cut(s)	1505, 2005
BpiI	GAAGAC	2 cut(s)	1707, 2010
BpmI	CTGGAG	1 cut(s)	1634
Bpu10I	CCTNAGC	2 cut(s)	389, 1755
Bpu14I	TTCGAA	2 cut(s)	74, 883
BpuEI	CTTGAG	3 cut(s)	356, 428, 1996
BsaAI	YACGTR	1 cut(s)	1219
BsaBI	GATNNNNATC	2 cut(s)	279, 963
BsaI	GGTCTC	1 cut(s)	1229
BsaJI	CCNNGG	2 cut(s)	577, 748
BsaWI	WCCGGW	2 cut(s)	118, 1231
BsaXI	ACNNNNNCTCC	2 cut(s)	422, 452
Bsc4I	CCNNNNNNNGG	7 cut(s)	390, 750, 777, 778, 1490, 1870, 2013
Bse1I	ACTGG	4 cut(s)	203, 1500, 1777, 2000
Bse21I	CCTNAGG	1 cut(s)	378
Bse3DI	GCAATG	1 cut(s)	813
Bse8I	GATNNNNATC	2 cut(s)	279, 963
BseBI	CCWGG	2 cut(s)	749, 1288
BseDI	CCNNGG	2 cut(s)	577, 748
BseGI	GGATG	4 cut(s)	362, 1248, 1756, 1792
BseJI	GATNNNNATC	2 cut(s)	279, 963
BseLI	CCNNNNNNNGG	7 cut(s)	390, 750, 777, 778, 1490, 1870, 2013
BseMI	GCAATG	1 cut(s)	813
BseMII	CTCAG	9 cut(s)	369, 403, 558, 680, 1573, 1673, 1746, 1791, 1883
BseNI	ACTGG	4 cut(s)	203, 1500, 1777, 2000
BseRI	GAGGAG	4 cut(s)	264, 1112, 1668, 1906
BseSI	GKGCMC	1 cut(s)	19
BseXI	GCAGC	8 cut(s)	307, 310, 701, 804, 1180, 1438, 1578, 1836
BsgI	GTGCAG	1 cut(s)	1409
Bsh1236I	CGCG	3 cut(s)	91, 93, 1934
BshFI	GGCC	5 cut(s)	383, 576, 861, 989, 1005
BsiHKAI	GWGCWC	5 cut(s)	19, 31, 126, 390, 1509
BsiSI	CCGG	4 cut(s)	119, 272, 862, 1232
BslFI	GGGAC	3 cut(s)	67, 209, 1506
BslI	CCNNNNNNNGG	7 cut(s)	390, 750, 777, 778, 1490, 1870, 2013
BsmAI	GTCTC	3 cut(s)	362, 442, 1229
BsmBI	CGTCTC	1 cut(s)	442
BsmFI	GGGAC	3 cut(s)	67, 209, 1506
BsmI	GAATGC	4 cut(s)	913, 980, 1959, 1988
BsnI	GGCC	5 cut(s)	383, 576, 861, 989, 1005
Bso31I	GGTCTC	1 cut(s)	1229
Bsp119I	TTCGAA	2 cut(s)	74, 883
Bsp1286I	GDGCHC	5 cut(s)	19, 31, 126, 390, 1509
Bsp19I	CCATGG	1 cut(s)	577
BspACI	CCGC	2 cut(s)	417, 811
BspANI	GGCC	5 cut(s)	383, 576, 861, 989, 1005
BspCNI	CTCAG	9 cut(s)	370, 402, 559, 679, 1572, 1674, 1747, 1790, 1882
BspFNI	CGCG	3 cut(s)	91, 93, 1934
BspHI	TCATGA	1 cut(s)	213
BspLI	GGNNCC	3 cut(s)	742, 755, 990
BspMI	ACCTGC	1 cut(s)	1420
BspPI	GGATC	6 cut(s)	198, 329, 789, 872, 953, 1832
BspQI	GCTCTTC	1 cut(s)	1078
BspT104I	TTCGAA	2 cut(s)	74, 883
BspTI	CTTAAG	1 cut(s)	1594
BspTNI	GGTCTC	1 cut(s)	1229
BsrDI	GCAATG	1 cut(s)	813
BsrI	ACTGG	4 cut(s)	203, 1500, 1777, 2000
BssECI	CCNNGG	2 cut(s)	577, 748
BssT1I	CCWWGG	1 cut(s)	577
Bst2UI	CCWGG	2 cut(s)	749, 1288
Bst4CI	ACNGT	3 cut(s)	607, 824, 1517
Bst6I	CTCTTC	4 cut(s)	627, 1078, 1217, 1466
BstAFI	CTTAAG	1 cut(s)	1594
BstAPI	GCANNNNNTGC	2 cut(s)	1025, 1297
BstBAI	YACGTR	1 cut(s)	1219
BstBI	TTCGAA	2 cut(s)	74, 883
BstC8I	GCNNGC	1 cut(s)	1938
BstDSI	CCRYGG	1 cut(s)	577
BstEII	GGTNACC	1 cut(s)	1859
BstENI	CCTNNNNNAGG	1 cut(s)	1868
BstF5I	GGATG	4 cut(s)	362, 1248, 1756, 1792
BstFNI	CGCG	3 cut(s)	91, 93, 1934
BstH2I	RGCGCY	1 cut(s)	1445
BstHHI	GCGC	3 cut(s)	93, 1444, 1936
BstMAI	GTCTC	3 cut(s)	362, 442, 1229
BstMWI	GCNNNNNNNGC	6 cut(s)	698, 767, 986, 1025, 1297, 1448
BstNI	CCWGG	2 cut(s)	749, 1288
BstPI	GGTNACC	1 cut(s)	1859
BstSCI	CCNGG	2 cut(s)	747, 1286
BstSLI	GKGCMC	1 cut(s)	19
BstUI	CGCG	3 cut(s)	91, 93, 1934
BstV1I	GCAGC	8 cut(s)	307, 310, 701, 804, 1180, 1438, 1578, 1836
BstV2I	GAAGAC	2 cut(s)	1707, 2010
BstX2I	RGATCY	5 cut(s)	321, 864, 958, 1606, 1837
BstYI	RGATCY	5 cut(s)	321, 864, 958, 1606, 1837
Bsu36I	CCTNAGG	1 cut(s)	378
BsuRI	GGCC	5 cut(s)	383, 576, 861, 989, 1005
BtgI	CCRYGG	1 cut(s)	577
BtrI	CACGTC	1 cut(s)	1523
BtsCI	GGATG	4 cut(s)	362, 1248, 1756, 1792
BtsIMutI	CAGTG	1 cut(s)	612
BveI	ACCTGC	1 cut(s)	1420
Cac8I	GCNNGC	1 cut(s)	1938
CaiI	CAGNNNCTG	2 cut(s)	377, 917
CciI	TCATGA	1 cut(s)	213
CfoI	GCGC	3 cut(s)	93, 1444, 1936
Cfr13I	GGNCC	4 cut(s)	374, 754, 988, 1109
CseI	GACGC	1 cut(s)	491
Csp6I	GTAC	5 cut(s)	109, 328, 590, 1069, 1813
CviAII	CATG	8 cut(s)	32, 214, 509, 578, 698, 758, 985, 1510
CviQI	GTAC	5 cut(s)	109, 328, 590, 1069, 1813
DraIII	CACNNNGTG	1 cut(s)	184
EaeI	YGGCCR	2 cut(s)	859, 1003
Eam1104I	CTCTTC	4 cut(s)	627, 1078, 1217, 1466
EarI	CTCTTC	4 cut(s)	627, 1078, 1217, 1466
Ecl136II	GAGCTC	3 cut(s)	29, 124, 388
Eco130I	CCWWGG	1 cut(s)	577
Eco24I	GRGCYC	3 cut(s)	31, 126, 390
Eco31I	GGTCTC	1 cut(s)	1229
Eco47I	GGWCC	3 cut(s)	374, 754, 1109
Eco53kI	GAGCTC	3 cut(s)	29, 124, 388
Eco57I	CTGAAG	7 cut(s)	542, 651, 1134, 1292, 1650, 1719, 2004
Eco81I	CCTNAGG	1 cut(s)	378
Eco91I	GGTNACC	1 cut(s)	1859
EcoICRI	GAGCTC	3 cut(s)	29, 124, 388
EcoNI	CCTNNNNNAGG	1 cut(s)	1868
EcoO109I	RGGNCCY	1 cut(s)	374
EcoO65I	GGTNACC	1 cut(s)	1859
EcoRI	GAATTC	2 cut(s)	885, 1667
EcoRII	CCWGG	2 cut(s)	747, 1286
EcoT14I	CCWWGG	1 cut(s)	577
EcoT38I	GRGCYC	3 cut(s)	31, 126, 390
ErhI	CCWWGG	1 cut(s)	577
Esp3I	CGTCTC	1 cut(s)	442
FaeI	CATG	8 cut(s)	35, 217, 512, 581, 701, 761, 988, 1513
FalI	AAGNNNNNCTT	2 cut(s)	1719, 1751
FaqI	GGGAC	3 cut(s)	67, 209, 1506
FatI	CATG	8 cut(s)	31, 213, 508, 577, 697, 757, 984, 1509
FauI	CCCGC	1 cut(s)	410
FauNDI	CATATG	2 cut(s)	797, 1177
FbaI	TGATCA	3 cut(s)	427, 964, 1821
Fnu4HI	GCNGC	8 cut(s)	296, 299, 690, 793, 1194, 1427, 1567, 1850
FokI	GGATG	4 cut(s)	369, 1235, 1763, 1799
FriOI	GRGCYC	3 cut(s)	31, 126, 390
Fsp4HI	GCNGC	8 cut(s)	296, 299, 690, 793, 1194, 1427, 1567, 1850
FspBI	CTAG	3 cut(s)	572, 1166, 1358
GlaI	GCGC	3 cut(s)	92, 1443, 1935
GluI	GCNGC	8 cut(s)	296, 299, 690, 793, 1194, 1427, 1567, 1850
GsuI	CTGGAG	1 cut(s)	1634
HaeII	RGCGCY	1 cut(s)	1445
HaeIII	GGCC	5 cut(s)	383, 576, 861, 989, 1005
HapII	CCGG	4 cut(s)	119, 272, 862, 1232
HgaI	GACGC	1 cut(s)	491
HhaI	GCGC	3 cut(s)	93, 1444, 1936
Hin1II	CATG	8 cut(s)	35, 217, 512, 581, 701, 761, 988, 1513
Hin6I	GCGC	3 cut(s)	91, 1442, 1934
HinP1I	GCGC	3 cut(s)	91, 1442, 1934
HincII	GTYRAC	2 cut(s)	363, 853
HindII	GTYRAC	2 cut(s)	363, 853
HindIII	AAGCTT	1 cut(s)	1713
HinfI	GANTC	8 cut(s)	141, 210, 659, 1008, 1537, 1684, 1967, 1978
HpaII	CCGG	4 cut(s)	119, 272, 862, 1232
HphI	GGTGA	5 cut(s)	497, 1276, 1388, 1418, 1444
Hpy166II	GTNNAC	5 cut(s)	17, 363, 827, 853, 1520
Hpy8I	GTNNAC	5 cut(s)	17, 363, 827, 853, 1520
Hpy99I	CGWCG	1 cut(s)	27
HpyAV	CCTTC	3 cut(s)	235, 1099, 1981
HpyCH4III	ACNGT	3 cut(s)	607, 824, 1517
HpyCH4IV	ACGT	4 cut(s)	183, 1218, 1254, 1522
HpyF10VI	GCNNNNNNNGC	6 cut(s)	698, 767, 986, 1025, 1297, 1448
HpySE526I	ACGT	4 cut(s)	183, 1218, 1254, 1522
Hsp92II	CATG	8 cut(s)	35, 217, 512, 581, 701, 761, 988, 1513
HspAI	GCGC	3 cut(s)	91, 1442, 1934
Ksp22I	TGATCA	3 cut(s)	427, 964, 1821
LguI	GCTCTTC	1 cut(s)	1078
LmnI	GCTCC	5 cut(s)	121, 292, 977, 1504, 1615
Lsp1109I	GCAGC	8 cut(s)	307, 310, 701, 804, 1180, 1438, 1578, 1836
LweI	GCATC	5 cut(s)	207, 1028, 1413, 1553, 1741
MaeI	CTAG	3 cut(s)	572, 1166, 1358
MaeII	ACGT	4 cut(s)	183, 1218, 1254, 1522
MaeIII	GTNAC	7 cut(s)	503, 607, 1009, 1096, 1406, 1859, 1945
MfeI	CAATTG	3 cut(s)	711, 1014, 1983
MflI	RGATCY	5 cut(s)	321, 864, 958, 1606, 1837
MhlI	GDGCHC	5 cut(s)	19, 31, 126, 390, 1509
MlyI	GAGTC	6 cut(s)	204, 1017, 1531, 1693, 1961, 1987
MmeI	TCCRAC	4 cut(s)	46, 1027, 1309, 1861
MseI	TTAA	3 cut(s)	234, 954, 1595
MslI	CAYNNNNRTG	1 cut(s)	713
MspCI	CTTAAG	1 cut(s)	1594
MspI	CCGG	4 cut(s)	119, 272, 862, 1232
MspR9I	CCNGG	2 cut(s)	749, 1288
MunI	CAATTG	3 cut(s)	711, 1014, 1983
Mva1269I	GAATGC	4 cut(s)	913, 980, 1959, 1988
MvaI	CCWGG	2 cut(s)	749, 1288
MvnI	CGCG	3 cut(s)	91, 93, 1934
MwoI	GCNNNNNNNGC	6 cut(s)	698, 767, 986, 1025, 1297, 1448
NcoI	CCATGG	1 cut(s)	577
NdeI	CATATG	2 cut(s)	797, 1177
NlaIII	CATG	8 cut(s)	35, 217, 512, 581, 701, 761, 988, 1513
NlaIV	GGNNCC	3 cut(s)	742, 755, 990
NmeAIII	GCCGAG	2 cut(s)	409, 1031
NmuCI	GTSAC	5 cut(s)	503, 607, 1009, 1406, 1945
NspV	TTCGAA	2 cut(s)	74, 883
OliI	CACNNNNGTG	1 cut(s)	713
PagI	TCATGA	1 cut(s)	213
PaqCI	CACCTGC	1 cut(s)	1420
PciSI	GCTCTTC	1 cut(s)	1078
PcsI	WCGNNNNNNNCGW	2 cut(s)	19, 180
PctI	GAATGC	4 cut(s)	913, 980, 1959, 1988
PfeI	GAWTC	2 cut(s)	141, 659
PflMI	CCANNNNNTGG	1 cut(s)	2013
PkrI	GCNGC	8 cut(s)	297, 300, 691, 794, 1195, 1428, 1568, 1851
PleI	GAGTC	6 cut(s)	204, 1016, 1531, 1692, 1961, 1986
PpsI	GAGTC	6 cut(s)	204, 1016, 1531, 1692, 1961, 1986
Ppu21I	YACGTR	1 cut(s)	1219
PpuMI	RGGWCCY	1 cut(s)	374
Psp124BI	GAGCTC	3 cut(s)	31, 126, 390
Psp5II	RGGWCCY	1 cut(s)	374
Psp6I	CCWGG	2 cut(s)	747, 1286
PspEI	GGTNACC	1 cut(s)	1859
PspGI	CCWGG	2 cut(s)	747, 1286
PspN4I	GGNNCC	3 cut(s)	742, 755, 990
PspPI	GGNCC	4 cut(s)	374, 754, 988, 1109
PspPPI	RGGWCCY	1 cut(s)	374
PstNI	CAGNNNCTG	2 cut(s)	377, 917
PsuI	RGATCY	5 cut(s)	321, 864, 958, 1606, 1837
RsaI	GTAC	5 cut(s)	110, 329, 591, 1070, 1814
RsaNI	GTAC	5 cut(s)	109, 328, 590, 1069, 1813
RseI	CAYNNNNRTG	1 cut(s)	713
SacI	GAGCTC	3 cut(s)	31, 126, 390
SapI	GCTCTTC	1 cut(s)	1078
SaqAI	TTAA	3 cut(s)	234, 954, 1595
SatI	GCNGC	8 cut(s)	296, 299, 690, 793, 1194, 1427, 1567, 1850
Sau96I	GGNCC	4 cut(s)	374, 754, 988, 1109
ScaI	AGTACT	1 cut(s)	110
SchI	GAGTC	6 cut(s)	204, 1017, 1531, 1693, 1961, 1987
ScrFI	CCNGG	2 cut(s)	749, 1288
SduI	GDGCHC	5 cut(s)	19, 31, 126, 390, 1509
SfaNI	GCATC	5 cut(s)	207, 1028, 1413, 1553, 1741
SfuI	TTCGAA	2 cut(s)	74, 883
SinI	GGWCC	3 cut(s)	374, 754, 1109
SmiMI	CAYNNNNRTG	1 cut(s)	713
SmlI	CTYRAG	4 cut(s)	335, 407, 1594, 1975
SmoI	CTYRAG	4 cut(s)	335, 407, 1594, 1975
SsiI	CCGC	2 cut(s)	417, 811
SspMI	CTAG	3 cut(s)	572, 1166, 1358
SstI	GAGCTC	3 cut(s)	31, 126, 390
StyD4I	CCNGG	2 cut(s)	747, 1286
StyI	CCWWGG	1 cut(s)	577
TaaI	ACNGT	3 cut(s)	607, 824, 1517
TaiI	ACGT	4 cut(s)	186, 1221, 1257, 1525
TaqI	TCGA	7 cut(s)	74, 144, 883, 1079, 1318, 1663, 2001
TatI	WGTACW	1 cut(s)	108
TfiI	GAWTC	2 cut(s)	141, 659
Tru1I	TTAA	3 cut(s)	234, 954, 1595
Tru9I	TTAA	3 cut(s)	234, 954, 1595
TscAI	CASTG	1 cut(s)	612
TseFI	GTSAC	5 cut(s)	503, 607, 1009, 1406, 1945
TseI	GCWGC	8 cut(s)	295, 298, 689, 792, 1193, 1426, 1566, 1849
Tsp45I	GTSAC	5 cut(s)	503, 607, 1009, 1406, 1945
TspDTI	ATGAA	7 cut(s)	329, 525, 719, 973, 1215, 1526, 1941
TspGWI	ACGGA	5 cut(s)	189, 334, 380, 424, 753
TspRI	CASTG	1 cut(s)	612
Van91I	CCANNNNNTGG	1 cut(s)	2013
Vha464I	CTTAAG	1 cut(s)	1594
VneI	GTGCAC	1 cut(s)	15
VpaK11BI	GGWCC	3 cut(s)	374, 754, 1109
XagI	CCTNNNNNAGG	1 cut(s)	1868
XapI	RAATTY	4 cut(s)	885, 898, 1379, 1667
XspI	CTAG	3 cut(s)	572, 1166, 1358
ZrmI	AGTACT	1 cut(s)	110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.