Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0011873

Physical Location & Seq

Genomic Coordinates Forward (+)

11867201 .. 11872808

Gene Structure 5608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G127000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGATCGCGTCACATGGCGAACCCAAGTCCTCTCGAATCATCTCAACCAACCTTCTATGTCCTCGCCTCTCTCCCCCAACCCATGCGTCGGCTTTTCTCCTCCTGAGCTCTCCGAGCCCTTTGAATTCGATACCAAGGAGATGCGCAAGCTCCTGGACGCCCACAATCTTGAGGACCGGGACTGGCTCTTCGGGCTGATGAAGCAGAGCAAGCCGTTTAATCCCAGAGAGGCCGGTGGCCGAGTGTTTGTCTCGCCTGACTACAACCAAAGCATGGAGCAGCAGAGAGAGATGACCATGAAGCGAATTGCCTACTTGTTGGATCGTGGGGTTTTCGAAGGTTGGCTTACGGAGAAAGGGGTCGAAGCTGAGTTGAGAAAGCTTGCGTTGCATGAGGTTATTGGGATTTATGATCACTCCCTTTCTGTGAAGCTCGGTGTCCATTTCTTTTTGTGGGGTGGTGCCATTCAGTTTTTCGGCACAAAGCGCCATCACGACAAGTGGCTGAGGGACACCGAGAATTATACAATCAAGGGTTGCTTTGCAATGTCAGAGTTGGGGCATGGGAGTAATGTTCGAGGAATTGAAACAGTCACCACTTATGATTCAAATACTGGAGAATTTGTCATTAATACTCCTTGTGAATCAGCTCAGAAGTATTGGATTGGAGGAGCAGCTAATCATGCCACACACACAATAGTCTTTTCACAACTCAATATATCTGGGAAAAACCATGGTGTCCATGCTTTTATAGCCCAGATCCGGGATGCAAATGGTAACATCTGTCCAAACATTCGTATTGCTGACTGTGGTCATAAAATTGGGTTAAATGGTGTTGATAATGGTCGAATATGGTTTGACAACGTTCGAATCCCCAGGGAAAATTTGTTAAATTCAGTGGCTGATGTTTCTCCAGATGGGCAATATCTGAGTGCAATAAAAGACCCAGATCAGAGATTTGCAGCATTCTTGGCTCCATTAACATCTGGTCGTGTAACAATAGCAGTTGGTGCAATTTTATCATCACAGATAAGTTTAGCAATAGCCATAAGGTACTCACTGACAAGGCGGGCCTTTTCTGTTACGCCAAAAGGGCCTGAAGTCCTATTGCTCGACTACCCTAGTCATCAACAGCGGCTTTTGCCTCTTCTTGCAAAGACATATGCTATGAGTTTTGCTGCAAATCACTTAAAAATGATCTACGTTAAGCGGACGCCTGAGTTGAGCAAAACCATCCATGTTGTTTCTAGTGCATTCAAGGCTACACTGACCTGGCATAACATGCGAACTCTTCAGGAATGCCGCGAAGCCTGCGGAGGGCAAGGTCTGAAGACTGAAAACCGTATCGGTCCTCTCAAAGGTGAATATGATGTGCAGTCCACTTTTGAGGGGGACAACAATGTTCTGATGCAGCAGGTCAGCAAAGCACTTCTTGCAGAGTATATAGCAGCTCACAAGAGAAGTAAACCATTTAAAGCTTTGGGATTAGAACACATGAATAAACCTTGTCCTGTCATTCCATCTCAACTTACAAGTTCTACCCTCCAGAGTAGCCAATTCCAGATGGATGCTTTCTGCTTAAGAGAGCGAGATCTACTGAATCGCTTTGCTATGGAAGTGTCAGAACGTCAAAAACAGGGAGAAAGCAAAGAATACTCCGTCATTCTGAGTTATCAACTTGCCCAAGATCTGGGCAGAGCTTTCTCAGATCGAACAATATTGCAAGCCCTCCTAGATGCTGAGGCAGGTGTACCTTCTGGTTCATTGAAGAATGTCTTAGCTATGTTGAGGTCCATGTATGCATTGATTTGCCTGGAAGAAGACCCGGCATTCCTCCGATTTGGGTACTTATCAACTGATAATGTTGCTGCTGTGAGGAAAGAAGTAAGCAGACTGTGTGGTGAACTGCGACCACATGCACTTGCCTTGGTCAGTTCCTTTGGCATCCCTGATGCTTTTTTGAGTCCTATAGCTTTTAACTGGATTGATGCAAATTCGTGGTCTTCAGTTCAGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0050660 GO:0050662 GO:0051791 GO:0055114 GO:0071704 GO:0072329 GO:0097159 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_1 Acyl-CoA_dh_M

Protein Analysis

673

Amino Acids

75.16

Weight (kDa)

8.18

Isoelectric Point (pI)

41.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06290 AT1G06310 AT3G06690
fragaria_vesca	FvH4_6g26900 FvH4_6g26900 FvH4_6g26900
malus_domestica	MD17G1234100.v1.1
prunus_persica	Prupe.3G127000_v2.0.a1
pyrus_communis	pycom17g23740
rosa_chinensis	RchiOBHm_Chr2g0128641
rosa_laevigata	RLG00000019014
rosa_multiflora	Rmu_sc0000837.1_g000086 Rmu_sc0003465.1_g000047
rosa_roxburghii	Rroxscaffold_2G00115420 Rroxscaffold_2G00115900
rosa_rugosa	Rorug02G0279600
rosa_samantha	Rh2DG357400
rosa_wichuraiana	Rw2G026890 Rw2G027150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1736
Acc16I	TGCGCA	1 cut(s)	146
Acc36I	ACCTGC	2 cut(s)	1405, 1736
AccB1I	GGYRCC	1 cut(s)	461
AccB7I	CCANNNNNTGG	2 cut(s)	274, 1690
AccII	CGCG	2 cut(s)	9, 1305
AciI	CCGC	5 cut(s)	1069, 1135, 1210, 1303, 1314
AclI	AACGTT	1 cut(s)	864
AclWI	GGATC	3 cut(s)	12, 330, 754
AcoI	YGGCCR	1 cut(s)	238
AcsI	RAATTY	5 cut(s)	125, 620, 883, 892, 1993
AcuI	CTGAAG	4 cut(s)	1119, 1277, 1349, 1989
AcyI	GRCGYC	2 cut(s)	159, 1214
AfaI	GTAC	3 cut(s)	1055, 1752, 1847
AfiI	CCNNNNNNNGG	7 cut(s)	89, 274, 762, 763, 1317, 1358, 1690
AflII	CTTAAG	1 cut(s)	1579
AgsI	TTSAA	5 cut(s)	125, 587, 609, 1258, 1768
AjnI	CCWGG	4 cut(s)	153, 875, 1271, 1812
Alw21I	GWGCWC	1 cut(s)	111
Alw26I	GTCTC	1 cut(s)	256
AlwI	GGATC	3 cut(s)	12, 330, 754
AlwNI	CAGNNNCTG	1 cut(s)	902
AoxI	GGCC	4 cut(s)	231, 238, 1071, 1094
ApeKI	GCWGC	7 cut(s)	280, 674, 962, 1178, 1411, 1448, 1868
ApoI	RAATTY	5 cut(s)	125, 620, 883, 892, 1993
ArsI	GACNNNNNNTTYG	4 cut(s)	173, 205, 1985, 2017
AseI	ATTAAT	1 cut(s)	630
AspLEI	GCGC	2 cut(s)	147, 489
AspS9I	GGNCC	5 cut(s)	175, 1071, 1094, 1349, 1791
AsuC2I	CCSGG	3 cut(s)	179, 764, 1826
AsuHPI	GGTGA	3 cut(s)	586, 1373, 1913
AsuII	TTCGAA	2 cut(s)	336, 868
AvaII	GGWCC	3 cut(s)	175, 1349, 1791
BanI	GGYRCC	1 cut(s)	461
BanII	GRGCYC	2 cut(s)	111, 120
BbsI	GAAGAC	3 cut(s)	1337, 1827, 1995
Bbv12I	GWGCWC	1 cut(s)	111
BbvCI	CCTCAGC	2 cut(s)	506, 1740
BbvI	GCAGC	7 cut(s)	292, 686, 974, 1165, 1423, 1460, 1855
BccI	CCATC	5 cut(s)	498, 911, 1241, 1528, 1558
BceAI	ACGGC	1 cut(s)	199
BciT130I	CCWGG	4 cut(s)	155, 877, 1273, 1814
BclI	TGATCA	1 cut(s)	412
BcnI	CCSGG	3 cut(s)	179, 764, 1826
BcoDI	GTCTC	1 cut(s)	256
BfaI	CTAG	4 cut(s)	1122, 1248, 1733, 2017
BfmI	CTRYAG	1 cut(s)	1968
BfoI	RGCGCY	1 cut(s)	490
BfrI	CTTAAG	1 cut(s)	1579
BfuAI	ACCTGC	2 cut(s)	1405, 1736
BglI	GCCNNNNNGGC	1 cut(s)	1093
BglII	AGATCT	2 cut(s)	1591, 1687
BisI	GCNGC	9 cut(s)	281, 675, 963, 1136, 1179, 1303, 1412, 1449, 1869
BlsI	GCNGC	9 cut(s)	282, 676, 964, 1137, 1180, 1304, 1413, 1450, 1870
Bme1390I	CCNGG	7 cut(s)	155, 179, 764, 877, 1273, 1814, 1826
Bme18I	GGWCC	3 cut(s)	175, 1349, 1791
BmgT120I	GGNCC	5 cut(s)	175, 1071, 1094, 1349, 1791
BmiI	GGNNCC	2 cut(s)	463, 975
BmrFI	CCNGG	7 cut(s)	155, 179, 764, 877, 1273, 1814, 1826
BmsI	GCATC	8 cut(s)	132, 757, 1398, 1558, 1726, 1942, 1953, 1978
BoxI	GACNNNNGTC	1 cut(s)	810
BpiI	GAAGAC	3 cut(s)	1337, 1827, 1995
BpmI	CTGGAG	3 cut(s)	636, 897, 1529
Bpu10I	CCTNAGC	3 cut(s)	105, 506, 1740
Bpu14I	TTCGAA	2 cut(s)	336, 868
BpuEI	CTTGAG	1 cut(s)	191
BpuMI	CCSGG	3 cut(s)	179, 764, 1826
BsaHI	GRCGYC	2 cut(s)	159, 1214
BsaJI	CCNNGG	5 cut(s)	135, 733, 875, 876, 1926
BsaXI	ACNNNNNCTCC	2 cut(s)	609, 639
Bsc4I	CCNNNNNNNGG	7 cut(s)	89, 274, 762, 763, 1317, 1358, 1690
Bse118I	RCCGGY	1 cut(s)	233
Bse1I	ACTGG	3 cut(s)	188, 619, 1985
Bse3DI	GCAATG	1 cut(s)	552
BseBI	CCWGG	4 cut(s)	155, 877, 1273, 1814
BseDI	CCNNGG	5 cut(s)	135, 733, 875, 876, 1926
BseGI	GGATG	4 cut(s)	772, 1233, 1573, 1944
BseLI	CCNNNNNNNGG	7 cut(s)	89, 274, 762, 763, 1317, 1358, 1690
BseMI	GCAATG	1 cut(s)	552
BseMII	CTCAG	9 cut(s)	96, 360, 497, 665, 920, 1209, 1658, 1719, 1731
BseNI	ACTGG	3 cut(s)	188, 619, 1985
BseRI	GAGGAG	2 cut(s)	90, 684
BseXI	GCAGC	7 cut(s)	292, 686, 974, 1165, 1423, 1460, 1855
BsgI	GTGCAG	1 cut(s)	1394
Bsh1236I	CGCG	2 cut(s)	9, 1305
BshFI	GGCC	4 cut(s)	233, 240, 1073, 1096
BshNI	GGYRCC	1 cut(s)	461
BsiHKAI	GWGCWC	1 cut(s)	111
BsiSI	CCGG	4 cut(s)	178, 234, 763, 1826
BslFI	GGGAC	3 cut(s)	194, 524, 1406
BslI	CCNNNNNNNGG	7 cut(s)	89, 274, 762, 763, 1317, 1358, 1690
BsmAI	GTCTC	1 cut(s)	256
BsmFI	GGGAC	3 cut(s)	194, 524, 1406
BsmI	GAATGC	4 cut(s)	965, 1253, 1304, 1829
BsnI	GGCC	4 cut(s)	233, 240, 1073, 1096
Bsp119I	TTCGAA	2 cut(s)	336, 868
Bsp1286I	GDGCHC	2 cut(s)	111, 120
Bsp143I	GATC	9 cut(s)	4, 322, 412, 759, 949, 1197, 1591, 1687, 1708
Bsp19I	CCATGG	1 cut(s)	733
BspACI	CCGC	5 cut(s)	1069, 1135, 1210, 1303, 1314
BspANI	GGCC	4 cut(s)	233, 240, 1073, 1096
BspCNI	CTCAG	9 cut(s)	97, 361, 498, 664, 921, 1210, 1659, 1718, 1732
BspFNI	CGCG	2 cut(s)	9, 1305
BspLI	GGNNCC	2 cut(s)	463, 975
BspMI	ACCTGC	2 cut(s)	1405, 1736
BspPI	GGATC	3 cut(s)	12, 330, 754
BspQI	GCTCTTC	1 cut(s)	194
BspT104I	TTCGAA	2 cut(s)	336, 868
BspT107I	GGYRCC	1 cut(s)	461
BspTI	CTTAAG	1 cut(s)	1579
BsrDI	GCAATG	1 cut(s)	552
BsrFI	RCCGGY	1 cut(s)	233
BsrI	ACTGG	3 cut(s)	188, 619, 1985
BssAI	RCCGGY	1 cut(s)	233
BssECI	CCNNGG	5 cut(s)	135, 733, 875, 876, 1926
BssMI	GATC	9 cut(s)	4, 322, 412, 759, 949, 1197, 1591, 1687, 1708
BssNI	GRCGYC	2 cut(s)	159, 1214
BssT1I	CCWWGG	3 cut(s)	135, 733, 1926
Bst2UI	CCWGG	4 cut(s)	155, 877, 1273, 1814
Bst4CI	ACNGT	4 cut(s)	592, 809, 1343, 1896
Bst6I	CTCTTC	3 cut(s)	194, 1152, 1296
BstACI	GRCGYC	2 cut(s)	159, 1214
BstAFI	CTTAAG	1 cut(s)	1579
BstAPI	GCANNNNNTGC	3 cut(s)	1010, 1282, 1433
BstBI	TTCGAA	2 cut(s)	336, 868
BstC8I	GCNNGC	6 cut(s)	149, 212, 384, 1071, 1312, 1725
BstDSI	CCRYGG	1 cut(s)	733
BstENI	CCTNNNNNAGG	1 cut(s)	1356
BstF5I	GGATG	4 cut(s)	772, 1233, 1573, 1944
BstFNI	CGCG	2 cut(s)	9, 1305
BstH2I	RGCGCY	1 cut(s)	490
BstHHI	GCGC	2 cut(s)	147, 489
BstKTI	GATC	9 cut(s)	7, 325, 415, 762, 952, 1200, 1594, 1690, 1711
BstMAI	GTCTC	1 cut(s)	256
BstMBI	GATC	9 cut(s)	4, 322, 412, 759, 949, 1197, 1591, 1687, 1708
BstNI	CCWGG	4 cut(s)	155, 877, 1273, 1814
BstNSI	RCATGY	2 cut(s)	1285, 1919
BstPAI	GACNNNNGTC	1 cut(s)	810
BstSCI	CCNGG	7 cut(s)	153, 177, 762, 875, 1271, 1812, 1824
BstSFI	CTRYAG	1 cut(s)	1968
BstUI	CGCG	2 cut(s)	9, 1305
BstV1I	GCAGC	7 cut(s)	292, 686, 974, 1165, 1423, 1460, 1855
BstV2I	GAAGAC	3 cut(s)	1337, 1827, 1995
BstX2I	RGATCY	3 cut(s)	759, 1591, 1687
BstYI	RGATCY	3 cut(s)	759, 1591, 1687
BsuRI	GGCC	4 cut(s)	233, 240, 1073, 1096
BtgI	CCRYGG	1 cut(s)	733
BtsCI	GGATG	4 cut(s)	772, 1233, 1573, 1944
BtsIMutI	CAGTG	3 cut(s)	903, 1058, 1265
BveI	ACCTGC	2 cut(s)	1405, 1736
Cac8I	GCNNGC	6 cut(s)	149, 212, 384, 1071, 1312, 1725
CaiI	CAGNNNCTG	1 cut(s)	902
CfoI	GCGC	2 cut(s)	147, 489
Cfr10I	RCCGGY	1 cut(s)	233
Cfr13I	GGNCC	5 cut(s)	175, 1071, 1094, 1349, 1791
CseI	GACGC	3 cut(s)	76, 167, 1222
Csp6I	GTAC	3 cut(s)	1054, 1751, 1846
CviQI	GTAC	3 cut(s)	1054, 1751, 1846
DpnI	GATC	9 cut(s)	6, 324, 414, 761, 951, 1199, 1593, 1689, 1710
DpnII	GATC	9 cut(s)	4, 322, 412, 759, 949, 1197, 1591, 1687, 1708
DraI	TTTAAA	1 cut(s)	1474
EaeI	YGGCCR	1 cut(s)	238
Eam1104I	CTCTTC	3 cut(s)	194, 1152, 1296
EarI	CTCTTC	3 cut(s)	194, 1152, 1296
Ecl136II	GAGCTC	1 cut(s)	109
Eco130I	CCWWGG	3 cut(s)	135, 733, 1926
Eco24I	GRGCYC	2 cut(s)	111, 120
Eco47I	GGWCC	3 cut(s)	175, 1349, 1791
Eco53kI	GAGCTC	1 cut(s)	109
Eco57I	CTGAAG	4 cut(s)	1119, 1277, 1349, 1989
EcoICRI	GAGCTC	1 cut(s)	109
EcoNI	CCTNNNNNAGG	1 cut(s)	1356
EcoO109I	RGGNCCY	1 cut(s)	1094
EcoRI	GAATTC	1 cut(s)	125
EcoRII	CCWGG	4 cut(s)	153, 875, 1271, 1812
EcoT14I	CCWWGG	3 cut(s)	135, 733, 1926
EcoT22I	ATGCAT	1 cut(s)	1804
EcoT38I	GRGCYC	2 cut(s)	111, 120
ErhI	CCWWGG	3 cut(s)	135, 733, 1926
FalI	AAGNNNNNCTT	8 cut(s)	330, 362, 524, 556, 1416, 1448, 1760, 1792
FaqI	GGGAC	3 cut(s)	194, 524, 1406
FauI	CCCGC	1 cut(s)	1062
FauNDI	CATATG	1 cut(s)	1162
FbaI	TGATCA	1 cut(s)	412
Fnu4HI	GCNGC	9 cut(s)	281, 675, 963, 1136, 1179, 1303, 1412, 1449, 1869
FokI	GGATG	4 cut(s)	779, 1220, 1580, 1931
FriOI	GRGCYC	2 cut(s)	111, 120
Fsp4HI	GCNGC	9 cut(s)	281, 675, 963, 1136, 1179, 1303, 1412, 1449, 1869
FspBI	CTAG	4 cut(s)	1122, 1248, 1733, 2017
FspI	TGCGCA	1 cut(s)	146
GlaI	GCGC	2 cut(s)	146, 488
GluI	GCNGC	9 cut(s)	281, 675, 963, 1136, 1179, 1303, 1412, 1449, 1869
GsuI	CTGGAG	3 cut(s)	636, 897, 1529
HaeII	RGCGCY	1 cut(s)	490
HaeIII	GGCC	4 cut(s)	233, 240, 1073, 1096
HapII	CCGG	4 cut(s)	178, 234, 763, 1826
HgaI	GACGC	3 cut(s)	76, 167, 1222
HhaI	GCGC	2 cut(s)	147, 489
Hin1I	GRCGYC	2 cut(s)	159, 1214
Hin6I	GCGC	2 cut(s)	145, 487
HinP1I	GCGC	2 cut(s)	145, 487
HindIII	AAGCTT	2 cut(s)	380, 1476
HinfI	GANTC	6 cut(s)	37, 605, 644, 870, 1600, 1963
HpaII	CCGG	4 cut(s)	178, 234, 763, 1826
HphI	GGTGA	3 cut(s)	586, 1373, 1913
Hpy166II	GTNNAC	4 cut(s)	1380, 1466, 1751, 1904
Hpy188III	TCNNGA	8 cut(s)	34, 104, 170, 494, 914, 1295, 1546, 1561
Hpy8I	GTNNAC	4 cut(s)	1380, 1466, 1751, 1904
Hpy99I	CGWCG	1 cut(s)	92
HpyAV	CCTTC	3 cut(s)	63, 332, 1764
HpyCH4III	ACNGT	4 cut(s)	592, 809, 1343, 1896
HpyCH4IV	ACGT	3 cut(s)	864, 1203, 1627
HpySE526I	ACGT	3 cut(s)	864, 1203, 1627
Hsp92I	GRCGYC	2 cut(s)	159, 1214
HspAI	GCGC	2 cut(s)	145, 487
Ksp22I	TGATCA	1 cut(s)	412
Kzo9I	GATC	9 cut(s)	4, 322, 412, 759, 949, 1197, 1591, 1687, 1708
LguI	GCTCTTC	1 cut(s)	194
LmnI	GCTCC	4 cut(s)	156, 277, 671, 979
Lsp1109I	GCAGC	7 cut(s)	292, 686, 974, 1165, 1423, 1460, 1855
LweI	GCATC	8 cut(s)	132, 757, 1398, 1558, 1726, 1942, 1953, 1978
MaeI	CTAG	4 cut(s)	1122, 1248, 1733, 2017
MaeII	ACGT	3 cut(s)	864, 1203, 1627
MaeIII	GTNAC	5 cut(s)	10, 592, 776, 994, 1081
MalI	GATC	9 cut(s)	6, 324, 414, 761, 951, 1199, 1593, 1689, 1710
MboI	GATC	9 cut(s)	4, 322, 412, 759, 949, 1197, 1591, 1687, 1708
MboII	GAAGA	8 cut(s)	181, 1139, 1283, 1342, 1780, 1829, 1832, 1995
MflI	RGATCY	3 cut(s)	759, 1591, 1687
MhlI	GDGCHC	2 cut(s)	111, 120
MlyI	GAGTC	1 cut(s)	1972
MmeI	TCCRAC	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	1804
MspA1I	CMGCKG	1 cut(s)	1135
MspCI	CTTAAG	1 cut(s)	1579
MspI	CCGG	4 cut(s)	178, 234, 763, 1826
MspR9I	CCNGG	7 cut(s)	155, 179, 764, 877, 1273, 1814, 1826
Mva1269I	GAATGC	4 cut(s)	965, 1253, 1304, 1829
MvaI	CCWGG	4 cut(s)	155, 877, 1273, 1814
MvnI	CGCG	2 cut(s)	9, 1305
NciI	CCSGG	3 cut(s)	179, 764, 1826
NcoI	CCATGG	1 cut(s)	733
NdeI	CATATG	1 cut(s)	1162
NdeII	GATC	9 cut(s)	4, 322, 412, 759, 949, 1197, 1591, 1687, 1708
NlaIV	GGNNCC	2 cut(s)	463, 975
NmeAIII	GCCGAG	1 cut(s)	266
NmuCI	GTSAC	2 cut(s)	10, 592
NsbI	TGCGCA	1 cut(s)	146
NsiI	ATGCAT	1 cut(s)	1804
NspI	RCATGY	2 cut(s)	1285, 1919
NspV	TTCGAA	2 cut(s)	336, 868
PaqCI	CACCTGC	1 cut(s)	1736
PasI	CCCWGGG	1 cut(s)	876
PciSI	GCTCTTC	1 cut(s)	194
PctI	GAATGC	4 cut(s)	965, 1253, 1304, 1829
PfeI	GAWTC	5 cut(s)	37, 605, 644, 870, 1600
PflMI	CCANNNNNTGG	2 cut(s)	274, 1690
PfoI	TCCNGGA	2 cut(s)	153, 762
PkrI	GCNGC	9 cut(s)	282, 676, 964, 1137, 1180, 1304, 1413, 1450, 1870
PleI	GAGTC	1 cut(s)	1971
PpsI	GAGTC	1 cut(s)	1971
PshAI	GACNNNNGTC	1 cut(s)	810
PshBI	ATTAAT	1 cut(s)	630
Psp124BI	GAGCTC	1 cut(s)	111
Psp1406I	AACGTT	1 cut(s)	864
Psp6I	CCWGG	4 cut(s)	153, 875, 1271, 1812
PspGI	CCWGG	4 cut(s)	153, 875, 1271, 1812
PspN4I	GGNNCC	2 cut(s)	463, 975
PspPI	GGNCC	5 cut(s)	175, 1071, 1094, 1349, 1791
PstNI	CAGNNNCTG	1 cut(s)	902
PsuI	RGATCY	3 cut(s)	759, 1591, 1687
RsaI	GTAC	3 cut(s)	1055, 1752, 1847
RsaNI	GTAC	3 cut(s)	1054, 1751, 1846
SacI	GAGCTC	1 cut(s)	111
SapI	GCTCTTC	1 cut(s)	194
SatI	GCNGC	9 cut(s)	281, 675, 963, 1136, 1179, 1303, 1412, 1449, 1869
Sau3AI	GATC	9 cut(s)	4, 322, 412, 759, 949, 1197, 1591, 1687, 1708
Sau96I	GGNCC	5 cut(s)	175, 1071, 1094, 1349, 1791
SchI	GAGTC	1 cut(s)	1972
ScrFI	CCNGG	7 cut(s)	155, 179, 764, 877, 1273, 1814, 1826
SduI	GDGCHC	2 cut(s)	111, 120
SfaNI	GCATC	8 cut(s)	132, 757, 1398, 1558, 1726, 1942, 1953, 1978
SfcI	CTRYAG	1 cut(s)	1968
SfuI	TTCGAA	2 cut(s)	336, 868
SinI	GGWCC	3 cut(s)	175, 1349, 1791
SmlI	CTYRAG	2 cut(s)	170, 1579
SmoI	CTYRAG	2 cut(s)	170, 1579
SsiI	CCGC	5 cut(s)	1069, 1135, 1210, 1303, 1314
SspI	AATATT	1 cut(s)	1719
SspMI	CTAG	4 cut(s)	1122, 1248, 1733, 2017
SstI	GAGCTC	1 cut(s)	111
StyD4I	CCNGG	7 cut(s)	153, 177, 762, 875, 1271, 1812, 1824
StyI	CCWWGG	3 cut(s)	135, 733, 1926
TaaI	ACNGT	4 cut(s)	592, 809, 1343, 1896
TaiI	ACGT	3 cut(s)	867, 1206, 1630
TaqI	TCGA	9 cut(s)	35, 129, 336, 363, 577, 847, 868, 1113, 1711
TaqII	GACCGA	1 cut(s)	1337
TauI	GCSGC	2 cut(s)	1138, 1305
TfiI	GAWTC	5 cut(s)	37, 605, 644, 870, 1600
TscAI	CASTG	3 cut(s)	903, 1065, 1272
TseFI	GTSAC	2 cut(s)	10, 592
TseI	GCWGC	7 cut(s)	280, 674, 962, 1178, 1411, 1448, 1868
Tsp45I	GTSAC	2 cut(s)	10, 592
TspDTI	ATGAA	4 cut(s)	215, 314, 1511, 1752
TspGWI	ACGGA	2 cut(s)	365, 1648
TspRI	CASTG	3 cut(s)	903, 1065, 1272
Van91I	CCANNNNNTGG	2 cut(s)	274, 1690
Vha464I	CTTAAG	1 cut(s)	1579
VpaK11BI	GGWCC	3 cut(s)	175, 1349, 1791
VspI	ATTAAT	1 cut(s)	630
XagI	CCTNNNNNAGG	1 cut(s)	1356
XapI	RAATTY	5 cut(s)	125, 620, 883, 892, 1993
XceI	RCATGY	2 cut(s)	1285, 1919
XspI	CTAG	4 cut(s)	1122, 1248, 1733, 2017
Zsp2I	ATGCAT	1 cut(s)	1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.