Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0011873

Physical Location & Seq

Genomic Coordinates Forward (+)

22020635 .. 22025144

Gene Structure 4510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g23740.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGATCGCGTGACATGGAGAACTCGAGTCCTCTCAAACCATCTCAACCAACCCTCATGGAGCTCGAACCCTCTTTCCCCCAACCCCTGCCTCGGCTTTTCTCCTCCCGAGCTCTCGGAACCCTTCGAATTCGACACCAAGGAGATGCGCAAGCTCCTCGACGCGCACAATCTCGAGGACAGGGACTGGCTTTTCGGCCTCATGAAGCAGAGCAAGCTCTTTAATCCGAGAGAGGCTGGCGGCCGGGTGTTTATCGCGCCGGACTACAACCAAAGCATGGAGCAGCAGCGGCAGATGACCATGAAGCGAATTGCCTACTTGCTGGATCGTGGGGTTTTCAAAGGCTGGCTTACGGATAGAGGGGTCGATGCCGAATTGCGAAAGTTTGCGTTTTTCGAGGTTATCGGGATTTTTGATCATTCCCTTGCGGTCAAGCTCGGTGTCCATTTCTTTTTGTGGGGCGGTGCCATTCAATTTTTCGGCACAAAGCGCCATCACGACAAGTGGCTGAGTGACACTGAGAACTATGCAATCAAGGGTTGCTTTGCAATGTCTGAGTTGGGCCATGGCAGTAATGTTCGAGGGATTGAAACAGTCACCACTTATGATTCAAGTACTGAAGAATTTGTTATTAATACTCCTTGTGAATCAGCTCAGAAGTATTGGATTGGAGGAGCAGCTAATCATGCCACACACACTATAGTCTTTTCACAACTCAGTATCTCCGGGAACAACCAAGGCGTCCATGCTCTTATAGCTCAGATCAGGGATGAAAATGGTAATGTCTGTCCAGGAGTTCGTATTGCCGATTGTGGTCACAAAATTGGCTTAAATGGTGTTGATAATGGTCGAATATGGTTTGACAACGTTCGAATTCCAAGGGAAAATTTGTTAAATTCAGTAGCTGATGTTTCTCCAGATGGGAAATATCTGAGTGCAATAAAAGACCCAGATCAGAGATTTGCAGCATTCATGGCTCCATTGACATCTGGTCGTGTAACTATAGCAGTCAGTTCCATTTACTCATCACAGGTAAGTTTAGCAATAGCCATAAGGTACTCATTGACAAGGCGGGCCTTTTCTGTTACGCCAAATGGGCCTGAAGTCCTATTGCTTGACTACCCCAGTCATCAACAGCGGCTTTTGCCTCTTCTTGCAAAGACATATGCTATGACTTTTGCTTCAAATTACTTAAAGATGATTTATGTTAAGAGGACGCCTGAGTCGAGCAAAACCATCCATGTTGTTTCTAGTGCATTTAAGGCTATACATACCTGGCATAACATGCGGACTCTTCAGGAATGCCGCGAAGCCTGTGGAGGGCAAGGTATAAAGACTGAAAACCGTGTTGGTCATTTTAAAGGTGAATTTGATGTGCAGTCCACTTTTGAGGGGGACAACAATGTTTTGATGCAACAGGTCAGCAAAGCACTGCTTGCAGAGTATATAGCAGCTCAGAAGAGAGGCAAACCATTTAAAGCTTTGGGACTAGAGCATATGAATAAACCTTGCCCTGTCATTCCATCTCAGCTTACAAGTTCTACCCTCCAGTGTAGCCAGTTCCAGATGGACGCTTTCTGCTTAAGAGAGCGAGATCTATTGAATAGATTTGCTATGGAAGTGTCACAACGTCAAAAACAGGGAGAAAGCAAAGAGTACTCAATCATTCTTAGTTATCAGCTTGCAGGGGACCTGGGCAGAGCTTTTGCAGATCGAGCAATATTGCAAACCTTCATAGATGCTGAGGCGGCACTACCTGCTGGTTCATTAAAGAATGTCTTAGCTCTGTTGAGGTCTATGTACGCATTGATTTGCTTGGAAGAAGATGCGGCATTCCTCCGATATGGGTACTTATCGACCGATAATGTCGCTGCTGTGAGGAAAGAAGTAAGCAGACTGTGTGGTGAATTGCGGCCGCATGCACTGGCCTTGGTGAGTTCCTTCGGCATCCCTGATGCATGTCTGAGTCCCATAGCTTTTAACTGGATCGATTCAAATTCGTGGTCTTCAGTTGAGCGGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0050660 GO:0050662 GO:0051791 GO:0055114 GO:0071704 GO:0072329 GO:0097159 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_1 Acyl-CoA_dh_M

Protein Analysis

675

Amino Acids

75.51

Weight (kDa)

8.3

Isoelectric Point (pI)

37.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06290 AT1G06310 AT3G06690
fragaria_vesca	FvH4_6g26900 FvH4_6g26900 FvH4_6g26900
malus_domestica	MD17G1234100.v1.1
prunus_persica	Prupe.3G127000_v2.0.a1
pyrus_communis	pycom17g23740
rosa_chinensis	RchiOBHm_Chr2g0128641
rosa_laevigata	RLG00000019014
rosa_multiflora	Rmu_sc0000837.1_g000086 Rmu_sc0003465.1_g000047
rosa_roxburghii	Rroxscaffold_2G00115420 Rroxscaffold_2G00115900
rosa_rugosa	Rorug02G0279600
rosa_samantha	Rh2DG357400
rosa_wichuraiana	Rw2G026890 Rw2G027150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1222
Acc16I	TGCGCA	1 cut(s)	149
Acc36I	ACCTGC	1 cut(s)	1765
AccB1I	GGYRCC	1 cut(s)	464
AccB7I	CCANNNNNTGG	1 cut(s)	277
AccBSI	CCGCTC	1 cut(s)	2017
AccII	CGCG	4 cut(s)	9, 164, 257, 1308
AclI	AACGTT	1 cut(s)	867
AclWI	GGATC	3 cut(s)	12, 333, 1994
AcoI	YGGCCR	2 cut(s)	241, 1913
AcsI	RAATTY	7 cut(s)	128, 623, 873, 886, 895, 1367, 1996
AcuI	CTGAAG	4 cut(s)	639, 1122, 1280, 1992
AcyI	GRCGYC	2 cut(s)	741, 1217
AfaI	GTAC	5 cut(s)	616, 1058, 1658, 1802, 1850
AfiI	CCNNNNNNNGG	3 cut(s)	92, 277, 1320
AflII	CTTAAG	1 cut(s)	1582
AgsI	TTSAA	7 cut(s)	340, 473, 590, 612, 1185, 1603, 1995
AhdI	GACNNNNNGTC	1 cut(s)	990
AjnI	CCWGG	3 cut(s)	790, 1274, 1692
AjuI	GAANNNNNNNTTGG	2 cut(s)	1332, 1364
AloI	GAACNNNNNNTCC	2 cut(s)	59, 91
Alw21I	GWGCWC	2 cut(s)	65, 114
AlwI	GGATC	3 cut(s)	12, 333, 1994
AlwNI	CAGNNNCTG	2 cut(s)	186, 905
Ama87I	CYCGRG	3 cut(s)	24, 107, 173
AoxI	GGCC	7 cut(s)	196, 241, 562, 1074, 1097, 1913, 1926
ApeKI	GCWGC	6 cut(s)	283, 286, 677, 965, 1451, 1871
ApoI	RAATTY	7 cut(s)	128, 623, 873, 886, 895, 1367, 1996
ArsI	GACNNNNNNTTYG	4 cut(s)	176, 208, 1988, 2020
AseI	ATTAAT	1 cut(s)	633
AspLEI	GCGC	4 cut(s)	150, 166, 259, 492
AspS9I	GGNCC	4 cut(s)	562, 1074, 1097, 1690
AsuC2I	CCSGG	2 cut(s)	245, 727
AsuHPI	GGTGA	4 cut(s)	589, 1376, 1916, 1945
AsuII	TTCGAA	2 cut(s)	126, 871
AvaI	CYCGRG	3 cut(s)	24, 107, 173
AvaII	GGWCC	1 cut(s)	1690
BanI	GGYRCC	1 cut(s)	464
BanII	GRGCYC	2 cut(s)	65, 114
BbsI	GAAGAC	1 cut(s)	1998
Bbv12I	GWGCWC	2 cut(s)	65, 114
BbvCI	CCTCAGC	1 cut(s)	1743
BbvI	GCAGC	6 cut(s)	295, 298, 689, 977, 1463, 1858
BccI	CCATC	6 cut(s)	48, 501, 914, 1244, 1531, 1561
BcgI	CGANNNNNNTGC	2 cut(s)	139, 173
BciT130I	CCWGG	3 cut(s)	792, 1276, 1694
BclI	TGATCA	1 cut(s)	415
BcnI	CCSGG	2 cut(s)	245, 727
BfaI	CTAG	2 cut(s)	1251, 1490
BfmI	CTRYAG	2 cut(s)	699, 1002
BfoI	RGCGCY	1 cut(s)	493
BfrI	CTTAAG	1 cut(s)	1582
BfuAI	ACCTGC	1 cut(s)	1765
BglI	GCCNNNNNGGC	1 cut(s)	1096
BglII	AGATCT	1 cut(s)	1594
BmcAI	AGTACT	2 cut(s)	616, 1658
Bme1390I	CCNGG	5 cut(s)	245, 727, 792, 1276, 1694
Bme18I	GGWCC	1 cut(s)	1690
BmeRI	GACNNNNNGTC	1 cut(s)	990
BmeT110I	CYCGRG	3 cut(s)	24, 107, 173
BmgT120I	GGNCC	4 cut(s)	562, 1074, 1097, 1690
BmiI	GGNNCC	4 cut(s)	120, 466, 978, 1691
BmrFI	CCNGG	5 cut(s)	245, 727, 792, 1276, 1694
BmrI	ACTGGG	1 cut(s)	1119
BmsI	GCATC	7 cut(s)	135, 358, 1401, 1729, 1816, 1945, 1956
BmuI	ACTGGG	1 cut(s)	1119
BpiI	GAAGAC	1 cut(s)	1998
BpmI	CTGGAG	2 cut(s)	900, 1532
Bpu10I	CCTNAGC	1 cut(s)	1743
Bpu14I	TTCGAA	2 cut(s)	126, 871
BpuMI	CCSGG	2 cut(s)	245, 727
Bsa29I	ATCGAT	1 cut(s)	1989
BsaHI	GRCGYC	2 cut(s)	741, 1217
BsaJI	CCNNGG	7 cut(s)	91, 138, 565, 736, 878, 1693, 1929
Bsc4I	CCNNNNNNNGG	3 cut(s)	92, 277, 1320
Bse1I	ACTGG	6 cut(s)	191, 1125, 1549, 1558, 1929, 1988
Bse3DI	GCAATG	1 cut(s)	555
BseBI	CCWGG	3 cut(s)	792, 1276, 1694
BseCI	ATCGAT	1 cut(s)	1989
BseDI	CCNNGG	7 cut(s)	91, 138, 565, 736, 878, 1693, 1929
BseGI	GGATG	3 cut(s)	775, 1236, 1947
BseLI	CCNNNNNNNGG	3 cut(s)	92, 277, 1320
BseMI	GCAATG	1 cut(s)	555
BseNI	ACTGG	6 cut(s)	191, 1125, 1549, 1558, 1929, 1988
BseRI	GAGGAG	3 cut(s)	93, 146, 687
BseX3I	CGGCCG	2 cut(s)	241, 1913
BseXI	GCAGC	6 cut(s)	295, 298, 689, 977, 1463, 1858
BsgI	GTGCAG	1 cut(s)	1397
Bsh1236I	CGCG	4 cut(s)	9, 164, 257, 1308
Bsh1285I	CGRYCG	3 cut(s)	244, 1860, 1916
BshFI	GGCC	7 cut(s)	198, 243, 564, 1076, 1099, 1915, 1928
BshNI	GGYRCC	1 cut(s)	464
BshVI	ATCGAT	1 cut(s)	1989
BsiEI	CGRYCG	3 cut(s)	244, 1860, 1916
BsiHKAI	GWGCWC	2 cut(s)	65, 114
BsiHKCI	CYCGRG	3 cut(s)	24, 107, 173
BsiSI	CCGG	3 cut(s)	244, 260, 726
BslFI	GGGAC	5 cut(s)	197, 1409, 1500, 1703, 1953
BslI	CCNNNNNNNGG	3 cut(s)	92, 277, 1320
BsmFI	GGGAC	5 cut(s)	197, 1409, 1500, 1703, 1953
BsmI	GAATGC	3 cut(s)	968, 1307, 1832
BsnI	GGCC	7 cut(s)	198, 243, 564, 1076, 1099, 1915, 1928
BsoBI	CYCGRG	3 cut(s)	24, 107, 173
Bsp119I	TTCGAA	2 cut(s)	126, 871
Bsp1286I	GDGCHC	2 cut(s)	65, 114
Bsp143I	GATC	8 cut(s)	4, 325, 415, 762, 952, 1594, 1711, 1986
Bsp19I	CCATGG	1 cut(s)	565
BspANI	GGCC	7 cut(s)	198, 243, 564, 1076, 1099, 1915, 1928
BspDI	ATCGAT	1 cut(s)	1989
BspFNI	CGCG	4 cut(s)	9, 164, 257, 1308
BspHI	TCATGA	1 cut(s)	201
BspLI	GGNNCC	4 cut(s)	120, 466, 978, 1691
BspMI	ACCTGC	1 cut(s)	1765
BspPI	GGATC	3 cut(s)	12, 333, 1994
BspT104I	TTCGAA	2 cut(s)	126, 871
BspT107I	GGYRCC	1 cut(s)	464
BspTI	CTTAAG	1 cut(s)	1582
BsrBI	CCGCTC	1 cut(s)	2017
BsrDI	GCAATG	1 cut(s)	555
BsrI	ACTGG	6 cut(s)	191, 1125, 1549, 1558, 1929, 1988
BssECI	CCNNGG	7 cut(s)	91, 138, 565, 736, 878, 1693, 1929
BssMI	GATC	8 cut(s)	4, 325, 415, 762, 952, 1594, 1711, 1986
BssNI	GRCGYC	2 cut(s)	741, 1217
BssT1I	CCWWGG	5 cut(s)	138, 565, 736, 878, 1929
Bst2UI	CCWGG	3 cut(s)	792, 1276, 1694
Bst4CI	ACNGT	3 cut(s)	595, 1346, 1899
Bst6I	CTCTTC	3 cut(s)	1155, 1299, 1454
BstACI	GRCGYC	2 cut(s)	741, 1217
BstAFI	CTTAAG	1 cut(s)	1582
BstAPI	GCANNNNNTGC	3 cut(s)	1285, 1436, 1757
BstBI	TTCGAA	2 cut(s)	126, 871
BstC8I	GCNNGC	8 cut(s)	152, 215, 238, 347, 1074, 1437, 1683, 1920
BstDSI	CCRYGG	1 cut(s)	565
BstF5I	GGATG	3 cut(s)	775, 1236, 1947
BstFNI	CGCG	4 cut(s)	9, 164, 257, 1308
BstH2I	RGCGCY	1 cut(s)	493
BstHHI	GCGC	4 cut(s)	150, 166, 259, 492
BstKTI	GATC	8 cut(s)	7, 328, 418, 765, 955, 1597, 1714, 1989
BstMBI	GATC	8 cut(s)	4, 325, 415, 762, 952, 1594, 1711, 1986
BstMCI	CGRYCG	3 cut(s)	244, 1860, 1916
BstNI	CCWGG	3 cut(s)	792, 1276, 1694
BstNSI	RCATGY	3 cut(s)	1288, 1922, 1962
BstSCI	CCNGG	5 cut(s)	243, 725, 790, 1274, 1692
BstSFI	CTRYAG	2 cut(s)	699, 1002
BstUI	CGCG	4 cut(s)	9, 164, 257, 1308
BstV1I	GCAGC	6 cut(s)	295, 298, 689, 977, 1463, 1858
BstV2I	GAAGAC	1 cut(s)	1998
BstX2I	RGATCY	1 cut(s)	1594
BstYI	RGATCY	1 cut(s)	1594
BstZI	CGGCCG	2 cut(s)	241, 1913
Bsu15I	ATCGAT	1 cut(s)	1989
BsuRI	GGCC	7 cut(s)	198, 243, 564, 1076, 1099, 1915, 1928
BsuTUI	ATCGAT	1 cut(s)	1989
BtgI	CCRYGG	1 cut(s)	565
BtsCI	GGATG	3 cut(s)	775, 1236, 1947
BtsI	GCAGTG	1 cut(s)	1430
BtsIMutI	CAGTG	4 cut(s)	516, 1430, 1556, 1922
BveI	ACCTGC	1 cut(s)	1765
Cac8I	GCNNGC	8 cut(s)	152, 215, 238, 347, 1074, 1437, 1683, 1920
CaiI	CAGNNNCTG	2 cut(s)	186, 905
CciI	TCATGA	1 cut(s)	201
CciNI	GCGGCCGC	1 cut(s)	1913
CfoI	GCGC	4 cut(s)	150, 166, 259, 492
Cfr13I	GGNCC	4 cut(s)	562, 1074, 1097, 1690
ClaI	ATCGAT	1 cut(s)	1989
CseI	GACGC	4 cut(s)	170, 730, 1225, 1580
Csp6I	GTAC	5 cut(s)	615, 1057, 1657, 1801, 1849
CviQI	GTAC	5 cut(s)	615, 1057, 1657, 1801, 1849
DpnI	GATC	8 cut(s)	6, 327, 417, 764, 954, 1596, 1713, 1988
DpnII	GATC	8 cut(s)	4, 325, 415, 762, 952, 1594, 1711, 1986
DraI	TTTAAA	2 cut(s)	1360, 1477
DrdI	GACNNNNNNGTC	1 cut(s)	1222
DriI	GACNNNNNGTC	1 cut(s)	990
DseDI	GACNNNNNNGTC	1 cut(s)	1222
EaeI	YGGCCR	2 cut(s)	241, 1913
EagI	CGGCCG	2 cut(s)	241, 1913
Eam1104I	CTCTTC	3 cut(s)	1155, 1299, 1454
Eam1105I	GACNNNNNGTC	1 cut(s)	990
EarI	CTCTTC	3 cut(s)	1155, 1299, 1454
Ecl136II	GAGCTC	2 cut(s)	63, 112
EclXI	CGGCCG	2 cut(s)	241, 1913
Eco130I	CCWWGG	5 cut(s)	138, 565, 736, 878, 1929
Eco24I	GRGCYC	2 cut(s)	65, 114
Eco47I	GGWCC	1 cut(s)	1690
Eco52I	CGGCCG	2 cut(s)	241, 1913
Eco53kI	GAGCTC	2 cut(s)	63, 112
Eco57I	CTGAAG	4 cut(s)	639, 1122, 1280, 1992
Eco88I	CYCGRG	3 cut(s)	24, 107, 173
EcoICRI	GAGCTC	2 cut(s)	63, 112
EcoO109I	RGGNCCY	1 cut(s)	1690
EcoRI	GAATTC	2 cut(s)	128, 873
EcoRII	CCWGG	3 cut(s)	790, 1274, 1692
EcoT14I	CCWWGG	5 cut(s)	138, 565, 736, 878, 1929
EcoT22I	ATGCAT	1 cut(s)	1960
EcoT38I	GRGCYC	2 cut(s)	65, 114
ErhI	CCWWGG	5 cut(s)	138, 565, 736, 878, 1929
FalI	AAGNNNNNCTT	8 cut(s)	333, 365, 527, 559, 1419, 1451, 1763, 1795
FaqI	GGGAC	5 cut(s)	197, 1409, 1500, 1703, 1953
FauI	CCCGC	1 cut(s)	1065
FauNDI	CATATG	2 cut(s)	1165, 1497
FbaI	TGATCA	1 cut(s)	415
FokI	GGATG	3 cut(s)	782, 1223, 1934
FriOI	GRGCYC	2 cut(s)	65, 114
FspBI	CTAG	2 cut(s)	1251, 1490
FspI	TGCGCA	1 cut(s)	149
GlaI	GCGC	4 cut(s)	149, 165, 258, 491
GsuI	CTGGAG	2 cut(s)	900, 1532
HaeII	RGCGCY	1 cut(s)	493
HaeIII	GGCC	7 cut(s)	198, 243, 564, 1076, 1099, 1915, 1928
HapII	CCGG	3 cut(s)	244, 260, 726
HgaI	GACGC	4 cut(s)	170, 730, 1225, 1580
HhaI	GCGC	4 cut(s)	150, 166, 259, 492
Hin1I	GRCGYC	2 cut(s)	741, 1217
Hin6I	GCGC	4 cut(s)	148, 164, 257, 490
HinP1I	GCGC	4 cut(s)	148, 164, 257, 490
HindIII	AAGCTT	1 cut(s)	1479
HinfI	GANTC	7 cut(s)	27, 608, 647, 1223, 1291, 1966, 1991
HpaII	CCGG	3 cut(s)	244, 260, 726
HphI	GGTGA	4 cut(s)	589, 1376, 1916, 1945
Hpy166II	GTNNAC	1 cut(s)	1383
Hpy188III	TCNNGA	8 cut(s)	107, 173, 202, 406, 497, 917, 1298, 1564
Hpy8I	GTNNAC	1 cut(s)	1383
Hpy99I	CGWCG	1 cut(s)	164
HpyAV	CCTTC	3 cut(s)	133, 1741, 1951
HpyCH4III	ACNGT	3 cut(s)	595, 1346, 1899
HpyCH4IV	ACGT	2 cut(s)	867, 1630
HpySE526I	ACGT	2 cut(s)	867, 1630
Hsp92I	GRCGYC	2 cut(s)	741, 1217
HspAI	GCGC	4 cut(s)	148, 164, 257, 490
Ksp22I	TGATCA	1 cut(s)	415
Kzo9I	GATC	8 cut(s)	4, 325, 415, 762, 952, 1594, 1711, 1986
LmnI	GCTCC	5 cut(s)	60, 159, 280, 674, 982
Lsp1109I	GCAGC	6 cut(s)	295, 298, 689, 977, 1463, 1858
LweI	GCATC	7 cut(s)	135, 358, 1401, 1729, 1816, 1945, 1956
MaeI	CTAG	2 cut(s)	1251, 1490
MaeII	ACGT	2 cut(s)	867, 1630
MaeIII	GTNAC	7 cut(s)	10, 512, 595, 815, 997, 1084, 1623
MalI	GATC	8 cut(s)	6, 327, 417, 764, 954, 1596, 1713, 1988
MbiI	CCGCTC	1 cut(s)	2017
MboI	GATC	8 cut(s)	4, 325, 415, 762, 952, 1594, 1711, 1986
MboII	GAAGA	7 cut(s)	632, 1142, 1286, 1471, 1832, 1835, 1998
MflI	RGATCY	1 cut(s)	1594
MhlI	GDGCHC	2 cut(s)	65, 114
MlyI	GAGTC	4 cut(s)	36, 1232, 1285, 1975
Mph1103I	ATGCAT	1 cut(s)	1960
MspA1I	CMGCKG	2 cut(s)	289, 1138
MspCI	CTTAAG	1 cut(s)	1582
MspI	CCGG	3 cut(s)	244, 260, 726
MspR9I	CCNGG	5 cut(s)	245, 727, 792, 1276, 1694
Mva1269I	GAATGC	3 cut(s)	968, 1307, 1832
MvaI	CCWGG	3 cut(s)	792, 1276, 1694
MvnI	CGCG	4 cut(s)	9, 164, 257, 1308
NciI	CCSGG	2 cut(s)	245, 727
NcoI	CCATGG	1 cut(s)	565
NdeI	CATATG	2 cut(s)	1165, 1497
NdeII	GATC	8 cut(s)	4, 325, 415, 762, 952, 1594, 1711, 1986
NlaIV	GGNNCC	4 cut(s)	120, 466, 978, 1691
NmeAIII	GCCGAG	1 cut(s)	72
NmuCI	GTSAC	5 cut(s)	10, 512, 595, 815, 1623
NotI	GCGGCCGC	1 cut(s)	1913
NsbI	TGCGCA	1 cut(s)	149
NsiI	ATGCAT	1 cut(s)	1960
NspI	RCATGY	3 cut(s)	1288, 1922, 1962
NspV	TTCGAA	2 cut(s)	126, 871
PaeI	GCATGC	1 cut(s)	1922
PaeR7I	CTCGAG	2 cut(s)	24, 173
PagI	TCATGA	1 cut(s)	201
PcsI	WCGNNNNNNNCGW	1 cut(s)	1223
PctI	GAATGC	3 cut(s)	968, 1307, 1832
PfeI	GAWTC	3 cut(s)	608, 647, 1991
PflMI	CCANNNNNTGG	1 cut(s)	277
PfoI	TCCNGGA	2 cut(s)	725, 790
PleI	GAGTC	4 cut(s)	35, 1231, 1285, 1974
PpsI	GAGTC	4 cut(s)	35, 1231, 1285, 1974
PpuMI	RGGWCCY	1 cut(s)	1690
PshBI	ATTAAT	1 cut(s)	633
Psp124BI	GAGCTC	2 cut(s)	65, 114
Psp1406I	AACGTT	1 cut(s)	867
Psp5II	RGGWCCY	1 cut(s)	1690
Psp6I	CCWGG	3 cut(s)	790, 1274, 1692
PspGI	CCWGG	3 cut(s)	790, 1274, 1692
PspN4I	GGNNCC	4 cut(s)	120, 466, 978, 1691
PspPI	GGNCC	4 cut(s)	562, 1074, 1097, 1690
PspPPI	RGGWCCY	1 cut(s)	1690
PspXI	VCTCGAGB	1 cut(s)	24
PstNI	CAGNNNCTG	2 cut(s)	186, 905
PsuI	RGATCY	1 cut(s)	1594
RsaI	GTAC	5 cut(s)	616, 1058, 1658, 1802, 1850
RsaNI	GTAC	5 cut(s)	615, 1057, 1657, 1801, 1849
SacI	GAGCTC	2 cut(s)	65, 114
Sau3AI	GATC	8 cut(s)	4, 325, 415, 762, 952, 1594, 1711, 1986
Sau96I	GGNCC	4 cut(s)	562, 1074, 1097, 1690
ScaI	AGTACT	2 cut(s)	616, 1658
SchI	GAGTC	4 cut(s)	36, 1232, 1285, 1975
ScrFI	CCNGG	5 cut(s)	245, 727, 792, 1276, 1694
SduI	GDGCHC	2 cut(s)	65, 114
SfaNI	GCATC	7 cut(s)	135, 358, 1401, 1729, 1816, 1945, 1956
SfcI	CTRYAG	2 cut(s)	699, 1002
Sfr274I	CTCGAG	2 cut(s)	24, 173
SfuI	TTCGAA	2 cut(s)	126, 871
SinI	GGWCC	1 cut(s)	1690
SlaI	CTCGAG	2 cut(s)	24, 173
SmlI	CTYRAG	3 cut(s)	24, 173, 1582
SmoI	CTYRAG	3 cut(s)	24, 173, 1582
SphI	GCATGC	1 cut(s)	1922
SspI	AATATT	1 cut(s)	1722
SspMI	CTAG	2 cut(s)	1251, 1490
SstI	GAGCTC	2 cut(s)	65, 114
StyD4I	CCNGG	5 cut(s)	243, 725, 790, 1274, 1692
StyI	CCWWGG	5 cut(s)	138, 565, 736, 878, 1929
TaaI	ACNGT	3 cut(s)	595, 1346, 1899
TaiI	ACGT	2 cut(s)	870, 1633
TaqII	GACCGA	1 cut(s)	1874
TatI	WGTACW	2 cut(s)	614, 1656
TauI	GCSGC	9 cut(s)	243, 292, 1141, 1308, 1751, 1832, 1915, 1918, 2020
TfiI	GAWTC	3 cut(s)	608, 647, 1991
TscAI	CASTG	4 cut(s)	523, 1437, 1556, 1929
TseFI	GTSAC	5 cut(s)	10, 512, 595, 815, 1623
TseI	GCWGC	6 cut(s)	283, 286, 677, 965, 1451, 1871
Tsp45I	GTSAC	5 cut(s)	10, 512, 595, 815, 1623
TspDTI	ATGAA	7 cut(s)	218, 317, 786, 961, 1514, 1723, 1755
TspGWI	ACGGA	1 cut(s)	368
TspRI	CASTG	4 cut(s)	523, 1437, 1556, 1929
Van91I	CCANNNNNTGG	1 cut(s)	277
Vha464I	CTTAAG	1 cut(s)	1582
VpaK11BI	GGWCC	1 cut(s)	1690
VspI	ATTAAT	1 cut(s)	633
XapI	RAATTY	7 cut(s)	128, 623, 873, 886, 895, 1367, 1996
XceI	RCATGY	3 cut(s)	1288, 1922, 1962
XhoI	CTCGAG	2 cut(s)	24, 173
XspI	CTAG	2 cut(s)	1251, 1490
ZrmI	AGTACT	2 cut(s)	616, 1658
Zsp2I	ATGCAT	1 cut(s)	1960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.