Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0011873

Physical Location & Seq

Genomic Coordinates Forward (+)

41660613 .. 41665753

Gene Structure 5141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00115420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGAGCAGCAGAGGGAGATGACGATGAAGCGGATTGCCTACTTGTTGGATCGCGGGGTTTTCAGAGGTTGGCTAACGGAGAAAGGGGTTGAGGTTGAGTTGAGGAAGTTTGCGTTGCAAGAAGTTGCTGCGATTTATGATCATTCGCTCTCTGTCAAGATCGGTGTGCATTTCTTTCTATGGGGTGGTGCCATTCTGTTCTTTGGCACAAAGCGCCATCACGACAAGTGGCTGAGGGACACTGAGAATTATGCAATCAAGGGTTGCTTTGCAATGTCTGAGTTAGGGCACGGCAGTAATGTTCGAGGAATCGAAACAGTCACCACTTACGATTCAAAAACTGGAGAGTTTGTCATTAATACTCCTTGTGAATCTGCTCAGAAGTATTGGATTGGAGGGGCAGCTAATCATGCCACACACACTATAGTCTTTTCACAACTCATCATATCCGGGACCAATCAAGGCGTCCATGCATTTATAGCCCAGATCAGGGATGGAAATGGGAACATCTGTCCAAACATCCGTATTGCTGATTGTGGTCATAAAATTGGTTTAAATGGTGTTGATAATGGTCGAATATGGTTTGACAATGTCCGAATCCCCAGGGAAAATTTGTTGAATTCAGTAGCAGATGTTTCCGCAGAAGGGCAATATCTGAGTGCAATAAAAGACCCAGATCAGAGATTCGCAGCGTTCTTGGCTCCATTGACATCTGGACGTGTAACTATAGCAACCAGTGCAATTTATACAGCAAAGATAAGTTTAGCAATTGCCATAAGGTACTCTTTGACAAGGCGGGCTTTTTCGGTTATACCAAACGGACCGGAAGTTCTATTGCTTGATTACCCAAGTCATCAACACCGGCTCTTGCCTCTCCTCGCAAAGACATATGCTATGACTTTTGCTGCAAATCACCTAAAGATGATCTATGTTAGGAGGACTCCTGAGTCGAGCAAAACCATCCATGTTGTTTCAAGTGCATTCAAGGCTACACTTACCTGGCATAACATGCGAACTCTTCAGGAGTGCCGTGAAGCCTGTGGAGGGCAAGGTCTGAAGACTGAAAACCGCATTGGTAATCTGAAAGGTGAATTTGATGTGCAGTCTACTTTTGAGGGGGACAATAATGTTCTGATGCAGCAGGTCAGCAAGGCACTTCTTGCAGAGTTTATAACAGCTCAGAAGAGAAGTAAACCATTTAAAGCTTTGGGATTAGAACATATGAATAAACCTTGCCCTGTCATTCCATCTCACCTTACAAGTTCTACTCTTCAGAGTATTGAATTTCAGTTGGATGCATTTTGCTTAAGAGAGCGGGATCTACTGAATCGCTTTGCTGTGGAAGTGTCACAACGACAAAAACAGGGAGAAAGCAAAGAGTACTCGGTTCTTCTGAGTTATCAGCTTGCAGATGATTTGGGAAGAGCTTTCTCAGATCGAACAATATTGCAAACCTTCATTGATGTAGAGGCAACTGTACCTGCTGGTTCACTGAAGAATGTCTTAGCTACGTTGAGGACCTTGTATGCATTGATTTGCTTGGAAGAGGATGTGGCATTCCTCCGATACGGGTACTTATCAACGGATAATGTTGCTGCCGTGAGGAAAGAAGTAAGCAGCCTCTGCAGAGAGCTACGACCCCATGCACTTGCCTTGGTCAGTTCTTTTGGCATCCCTGATGCTTTCCTCAGTCCTATAGCTTTTAACTGGATCGAGTCAAATTCATGGTCTTCAGTTCAGCAGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0050660 GO:0050662 GO:0051791 GO:0055114 GO:0071704 GO:0072329 GO:0097159 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_1 Acyl-CoA_dh_M

Protein Analysis

582

Amino Acids

65.0

Weight (kDa)

8.66

Isoelectric Point (pI)

37.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyl-CoA_dh_M	PF02770	89 - 198	2.2e-11	Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1	PF00441	231 - 387	4.7e-10	Acyl-CoA dehydrogenase, C-terminal domain
ACOX_C_alpha1	PF22924	236 - 387	3.6e-41	Acyl-CoA oxidase, C-alpha1 domain
ACOX	PF01756	428 - 563	1.6e-19	Acyl-CoA oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06290 AT1G06310 AT3G06690
fragaria_vesca	FvH4_6g26900 FvH4_6g26900 FvH4_6g26900
malus_domestica	MD17G1234100.v1.1
prunus_persica	Prupe.3G127000_v2.0.a1
pyrus_communis	pycom17g23740
rosa_chinensis	RchiOBHm_Chr2g0128641
rosa_laevigata	RLG00000019014
rosa_multiflora	Rmu_sc0000837.1_g000086 Rmu_sc0003465.1_g000047
rosa_roxburghii	Rroxscaffold_2G00115420 Rroxscaffold_2G00115900
rosa_rugosa	Rorug02G0279600
rosa_samantha	Rh2DG357400
rosa_wichuraiana	Rw2G026890 Rw2G027150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1172
AasI	GACNNNNNNGTC	1 cut(s)	946
Acc36I	ACCTGC	2 cut(s)	1132, 1489
AccB1I	GGYRCC	1 cut(s)	188
AccBSI	CCGCTC	1 cut(s)	1315
AccI	GTMKAC	1 cut(s)	1106
AccII	CGCG	1 cut(s)	54
AciI	CCGC	6 cut(s)	31, 54, 639, 796, 1069, 1315
AclWI	GGATC	3 cut(s)	57, 1326, 1718
AcsI	RAATTY	5 cut(s)	610, 619, 1091, 1283, 1720
AcuI	CTGAAG	5 cut(s)	1004, 1076, 1256, 1514, 1716
AcyI	GRCGYC	1 cut(s)	465
AfaI	GTAC	4 cut(s)	782, 1382, 1479, 1574
AfiI	CCNNNNNNNGG	4 cut(s)	489, 490, 645, 1044
AflII	CTTAAG	1 cut(s)	1306
AflIII	ACRYGT	1 cut(s)	718
AgsI	TTSAA	5 cut(s)	336, 619, 975, 985, 1283
AjiI	CACGTC	1 cut(s)	719
AjnI	CCWGG	2 cut(s)	602, 998
AjuI	GAANNNNNNNTTGG	2 cut(s)	1056, 1088
AloI	GAACNNNNNNTCC	2 cut(s)	813, 845
AluBI	AGCT	8 cut(s)	404, 1178, 1205, 1405, 1427, 1508, 1633, 1700
AluI	AGCT	8 cut(s)	404, 1178, 1205, 1405, 1427, 1508, 1633, 1700
AlwI	GGATC	3 cut(s)	57, 1326, 1718
AlwNI	CAGNNNCTG	1 cut(s)	1623
ApeKI	GCWGC	8 cut(s)	7, 128, 401, 689, 905, 1138, 1595, 1617
ApoI	RAATTY	5 cut(s)	610, 619, 1091, 1283, 1720
ArsI	GACNNNNNNTTYG	2 cut(s)	1712, 1744
AseI	ATTAAT	1 cut(s)	357
AspLEI	GCGC	1 cut(s)	216
AspS9I	GGNCC	3 cut(s)	453, 821, 1518
AsuC2I	CCSGG	1 cut(s)	451
AsuHPI	GGTGA	4 cut(s)	313, 905, 1100, 1244
AvaII	GGWCC	3 cut(s)	453, 821, 1518
BaeGI	GKGCMC	1 cut(s)	291
BanI	GGYRCC	1 cut(s)	188
BbsI	GAAGAC	2 cut(s)	1064, 1722
BbvCI	CCTCAGC	1 cut(s)	233
BbvI	GCAGC	8 cut(s)	19, 115, 413, 701, 892, 1150, 1582, 1629
BccI	CCATC	4 cut(s)	225, 488, 968, 1255
BceAI	ACGGC	3 cut(s)	307, 1014, 1583
BciT130I	CCWGG	2 cut(s)	604, 1000
BclI	TGATCA	1 cut(s)	139
BcnI	CCSGG	1 cut(s)	451
BfaI	CTAG	1 cut(s)	1747
BfmI	CTRYAG	4 cut(s)	423, 726, 1624, 1695
BfoI	RGCGCY	1 cut(s)	217
BfrI	CTTAAG	1 cut(s)	1306
BfuAI	ACCTGC	2 cut(s)	1132, 1489
BisI	GCNGC	8 cut(s)	8, 129, 402, 690, 906, 1139, 1596, 1618
BlsI	GCNGC	8 cut(s)	9, 130, 403, 691, 907, 1140, 1597, 1619
BmcAI	AGTACT	1 cut(s)	1382
Bme1390I	CCNGG	3 cut(s)	451, 604, 1000
Bme18I	GGWCC	3 cut(s)	453, 821, 1518
BmgBI	CACGTC	1 cut(s)	719
BmgT120I	GGNCC	3 cut(s)	453, 821, 1518
BmiI	GGNNCC	3 cut(s)	190, 454, 702
BmrFI	CCNGG	3 cut(s)	451, 604, 1000
BmsI	GCATC	4 cut(s)	1125, 1285, 1669, 1680
BpiI	GAAGAC	2 cut(s)	1064, 1722
BpmI	CTGGAG	1 cut(s)	363
Bpu10I	CCTNAGC	1 cut(s)	233
BpuMI	CCSGG	1 cut(s)	451
BsaHI	GRCGYC	1 cut(s)	465
BsaJI	CCNNGG	3 cut(s)	602, 603, 1653
BsaWI	WCCGGW	1 cut(s)	823
BsaXI	ACNNNNNCTCC	2 cut(s)	336, 366
Bsc4I	CCNNNNNNNGG	4 cut(s)	489, 490, 645, 1044
Bse118I	RCCGGY	1 cut(s)	861
Bse1I	ACTGG	3 cut(s)	346, 735, 1712
Bse3DI	GCAATG	1 cut(s)	279
BseBI	CCWGG	2 cut(s)	604, 1000
BseDI	CCNNGG	3 cut(s)	602, 603, 1653
BseGI	GGATG	6 cut(s)	499, 519, 960, 1300, 1555, 1671
BseLI	CCNNNNNNNGG	4 cut(s)	489, 490, 645, 1044
BseMI	GCAATG	1 cut(s)	279
BseNI	ACTGG	3 cut(s)	346, 735, 1712
BseRI	GAGGAG	1 cut(s)	866
BseSI	GKGCMC	1 cut(s)	291
BseXI	GCAGC	8 cut(s)	19, 115, 413, 701, 892, 1150, 1582, 1629
BsgI	GTGCAG	1 cut(s)	1121
Bsh1236I	CGCG	1 cut(s)	54
BshNI	GGYRCC	1 cut(s)	188
BsiSI	CCGG	3 cut(s)	450, 824, 862
BslFI	GGGAC	3 cut(s)	251, 466, 1133
BslI	CCNNNNNNNGG	4 cut(s)	489, 490, 645, 1044
BsmFI	GGGAC	3 cut(s)	251, 466, 1133
BsmI	GAATGC	2 cut(s)	980, 1556
Bsp1286I	GDGCHC	1 cut(s)	291
Bsp143I	GATC	9 cut(s)	49, 139, 159, 486, 676, 924, 1318, 1435, 1710
BspACI	CCGC	6 cut(s)	31, 54, 639, 796, 1069, 1315
BspFNI	CGCG	1 cut(s)	54
BspLI	GGNNCC	3 cut(s)	190, 454, 702
BspMAI	CTGCAG	1 cut(s)	1628
BspMI	ACCTGC	2 cut(s)	1132, 1489
BspPI	GGATC	3 cut(s)	57, 1326, 1718
BspQI	GCTCTTC	1 cut(s)	1417
BspT107I	GGYRCC	1 cut(s)	188
BspTI	CTTAAG	1 cut(s)	1306
BsrBI	CCGCTC	1 cut(s)	1315
BsrDI	GCAATG	1 cut(s)	279
BsrFI	RCCGGY	1 cut(s)	861
BsrI	ACTGG	3 cut(s)	346, 735, 1712
BssAI	RCCGGY	1 cut(s)	861
BssECI	CCNNGG	3 cut(s)	602, 603, 1653
BssMI	GATC	9 cut(s)	49, 139, 159, 486, 676, 924, 1318, 1435, 1710
BssNI	GRCGYC	1 cut(s)	465
BssT1I	CCWWGG	1 cut(s)	1653
Bst2UI	CCWGG	2 cut(s)	604, 1000
Bst4CI	ACNGT	2 cut(s)	319, 1477
Bst6I	CTCTTC	5 cut(s)	1023, 1178, 1275, 1417, 1539
BstACI	GRCGYC	1 cut(s)	465
BstAFI	CTTAAG	1 cut(s)	1306
BstAPI	GCANNNNNTGC	4 cut(s)	737, 1009, 1160, 1623
BstC8I	GCNNGC	2 cut(s)	798, 1407
BstF5I	GGATG	6 cut(s)	499, 519, 960, 1300, 1555, 1671
BstFNI	CGCG	1 cut(s)	54
BstH2I	RGCGCY	1 cut(s)	217
BstHHI	GCGC	1 cut(s)	216
BstKTI	GATC	9 cut(s)	52, 142, 162, 489, 679, 927, 1321, 1438, 1713
BstMBI	GATC	9 cut(s)	49, 139, 159, 486, 676, 924, 1318, 1435, 1710
BstMWI	GCNNNNNNNGC	9 cut(s)	213, 410, 479, 698, 737, 986, 1009, 1160, 1623
BstNI	CCWGG	2 cut(s)	604, 1000
BstNSI	RCATGY	1 cut(s)	1012
BstSCI	CCNGG	3 cut(s)	449, 602, 998
BstSFI	CTRYAG	4 cut(s)	423, 726, 1624, 1695
BstSLI	GKGCMC	1 cut(s)	291
BstUI	CGCG	1 cut(s)	54
BstV1I	GCAGC	8 cut(s)	19, 115, 413, 701, 892, 1150, 1582, 1629
BstV2I	GAAGAC	2 cut(s)	1064, 1722
BstX2I	RGATCY	1 cut(s)	1318
BstYI	RGATCY	1 cut(s)	1318
BtrI	CACGTC	1 cut(s)	719
BtsCI	GGATG	6 cut(s)	499, 519, 960, 1300, 1555, 1671
BtsIMutI	CAGTG	3 cut(s)	240, 742, 1490
BveI	ACCTGC	2 cut(s)	1132, 1489
Cac8I	GCNNGC	2 cut(s)	798, 1407
CaiI	CAGNNNCTG	1 cut(s)	1623
CfoI	GCGC	1 cut(s)	216
Cfr10I	RCCGGY	1 cut(s)	861
Cfr13I	GGNCC	3 cut(s)	453, 821, 1518
CpoI	CGGWCCG	1 cut(s)	821
CseI	GACGC	1 cut(s)	454
Csp6I	GTAC	4 cut(s)	781, 1381, 1478, 1573
CspI	CGGWCCG	1 cut(s)	821
CviAII	CATG	6 cut(s)	410, 470, 965, 1009, 1643, 1725
CviQI	GTAC	4 cut(s)	781, 1381, 1478, 1573
DpnI	GATC	9 cut(s)	51, 141, 161, 488, 678, 926, 1320, 1437, 1712
DpnII	GATC	9 cut(s)	49, 139, 159, 486, 676, 924, 1318, 1435, 1710
DraI	TTTAAA	2 cut(s)	555, 1201
DrdI	GACNNNNNNGTC	1 cut(s)	946
DseDI	GACNNNNNNGTC	1 cut(s)	946
Eam1104I	CTCTTC	5 cut(s)	1023, 1178, 1275, 1417, 1539
EarI	CTCTTC	5 cut(s)	1023, 1178, 1275, 1417, 1539
Eco130I	CCWWGG	1 cut(s)	1653
Eco47I	GGWCC	3 cut(s)	453, 821, 1518
Eco57I	CTGAAG	5 cut(s)	1004, 1076, 1256, 1514, 1716
EcoO109I	RGGNCCY	1 cut(s)	1518
EcoRI	GAATTC	1 cut(s)	619
EcoRII	CCWGG	2 cut(s)	602, 998
EcoT14I	CCWWGG	1 cut(s)	1653
EcoT22I	ATGCAT	3 cut(s)	475, 1300, 1531
ErhI	CCWWGG	1 cut(s)	1653
FaeI	CATG	6 cut(s)	413, 473, 968, 1012, 1646, 1728
FalI	AAGNNNNNCTT	8 cut(s)	251, 283, 769, 801, 784, 816, 1487, 1519
FaqI	GGGAC	3 cut(s)	251, 466, 1133
FatI	CATG	6 cut(s)	409, 469, 964, 1008, 1642, 1724
FauI	CCCGC	3 cut(s)	47, 789, 1308
FauNDI	CATATG	2 cut(s)	889, 1221
FbaI	TGATCA	1 cut(s)	139
FblI	GTMKAC	1 cut(s)	1106
Fnu4HI	GCNGC	8 cut(s)	8, 129, 402, 690, 906, 1139, 1596, 1618
FokI	GGATG	6 cut(s)	506, 506, 947, 1307, 1562, 1658
Fsp4HI	GCNGC	8 cut(s)	8, 129, 402, 690, 906, 1139, 1596, 1618
FspBI	CTAG	1 cut(s)	1747
GlaI	GCGC	1 cut(s)	215
GluI	GCNGC	8 cut(s)	8, 129, 402, 690, 906, 1139, 1596, 1618
GsuI	CTGGAG	1 cut(s)	363
HaeII	RGCGCY	1 cut(s)	217
HapII	CCGG	3 cut(s)	450, 824, 862
HgaI	GACGC	1 cut(s)	454
HhaI	GCGC	1 cut(s)	216
Hin1I	GRCGYC	1 cut(s)	465
Hin1II	CATG	6 cut(s)	413, 473, 968, 1012, 1646, 1728
Hin6I	GCGC	1 cut(s)	214
HinP1I	GCGC	1 cut(s)	214
HindIII	AAGCTT	1 cut(s)	1203
HinfI	GANTC	9 cut(s)	309, 332, 371, 597, 684, 940, 947, 1327, 1715
HpaII	CCGG	3 cut(s)	450, 824, 862
HphI	GGTGA	4 cut(s)	313, 905, 1100, 1244
Hpy166II	GTNNAC	3 cut(s)	1107, 1193, 1490
Hpy188III	TCNNGA	5 cut(s)	157, 221, 714, 944, 1022
Hpy8I	GTNNAC	3 cut(s)	1107, 1193, 1490
HpyAV	CCTTC	2 cut(s)	638, 1465
HpyCH4III	ACNGT	2 cut(s)	319, 1477
HpyCH4IV	ACGT	2 cut(s)	718, 1511
HpyF10VI	GCNNNNNNNGC	9 cut(s)	213, 410, 479, 698, 737, 986, 1009, 1160, 1623
HpySE526I	ACGT	2 cut(s)	718, 1511
Hsp92I	GRCGYC	1 cut(s)	465
Hsp92II	CATG	6 cut(s)	413, 473, 968, 1012, 1646, 1728
HspAI	GCGC	1 cut(s)	214
Ksp22I	TGATCA	1 cut(s)	139
Kzo9I	GATC	9 cut(s)	49, 139, 159, 486, 676, 924, 1318, 1435, 1710
LguI	GCTCTTC	1 cut(s)	1417
LmnI	GCTCC	2 cut(s)	4, 706
Lsp1109I	GCAGC	8 cut(s)	19, 115, 413, 701, 892, 1150, 1582, 1629
LweI	GCATC	4 cut(s)	1125, 1285, 1669, 1680
MaeI	CTAG	1 cut(s)	1747
MaeII	ACGT	2 cut(s)	718, 1511
MaeIII	GTNAC	3 cut(s)	319, 721, 1347
MalI	GATC	9 cut(s)	51, 141, 161, 488, 678, 926, 1320, 1437, 1712
MbiI	CCGCTC	1 cut(s)	1315
MboI	GATC	9 cut(s)	49, 139, 159, 486, 676, 924, 1318, 1435, 1710
MboII	GAAGA	9 cut(s)	1010, 1069, 1195, 1262, 1382, 1434, 1507, 1556, 1722
MfeI	CAATTG	1 cut(s)	768
MflI	RGATCY	1 cut(s)	1318
MhlI	GDGCHC	1 cut(s)	291
MluCI	AATT	9 cut(s)	247, 546, 610, 619, 741, 768, 1091, 1283, 1720
MlyI	GAGTC	3 cut(s)	934, 956, 1724
MmeI	TCCRAC	2 cut(s)	27, 1272
Mph1103I	ATGCAT	3 cut(s)	475, 1300, 1531
MseI	TTAA	5 cut(s)	357, 554, 1200, 1307, 1704
MspCI	CTTAAG	1 cut(s)	1306
MspI	CCGG	3 cut(s)	450, 824, 862
MspR9I	CCNGG	3 cut(s)	451, 604, 1000
MunI	CAATTG	1 cut(s)	768
Mva1269I	GAATGC	2 cut(s)	980, 1556
MvaI	CCWGG	2 cut(s)	604, 1000
MvnI	CGCG	1 cut(s)	54
MwoI	GCNNNNNNNGC	9 cut(s)	213, 410, 479, 698, 737, 986, 1009, 1160, 1623
NciI	CCSGG	1 cut(s)	451
NdeI	CATATG	2 cut(s)	889, 1221
NdeII	GATC	9 cut(s)	49, 139, 159, 486, 676, 924, 1318, 1435, 1710
NlaIII	CATG	6 cut(s)	413, 473, 968, 1012, 1646, 1728
NlaIV	GGNNCC	3 cut(s)	190, 454, 702
NmuCI	GTSAC	2 cut(s)	319, 1347
NsiI	ATGCAT	3 cut(s)	475, 1300, 1531
NspI	RCATGY	1 cut(s)	1012
PasI	CCCWGGG	1 cut(s)	603
PciSI	GCTCTTC	1 cut(s)	1417
PctI	GAATGC	2 cut(s)	980, 1556
PfeI	GAWTC	6 cut(s)	309, 332, 371, 597, 684, 1327
PflFI	GACNNNGTC	1 cut(s)	590
PfoI	TCCNGGA	1 cut(s)	449
PkrI	GCNGC	8 cut(s)	9, 130, 403, 691, 907, 1140, 1597, 1619
PleI	GAGTC	3 cut(s)	934, 955, 1723
PpsI	GAGTC	3 cut(s)	934, 955, 1723
PpuMI	RGGWCCY	1 cut(s)	1518
PshBI	ATTAAT	1 cut(s)	357
PsiI	TTATAA	1 cut(s)	1172
Psp5II	RGGWCCY	1 cut(s)	1518
Psp6I	CCWGG	2 cut(s)	602, 998
PspGI	CCWGG	2 cut(s)	602, 998
PspN4I	GGNNCC	3 cut(s)	190, 454, 702
PspPI	GGNCC	3 cut(s)	453, 821, 1518
PspPPI	RGGWCCY	1 cut(s)	1518
PstI	CTGCAG	1 cut(s)	1628
PstNI	CAGNNNCTG	1 cut(s)	1623
PsuI	RGATCY	1 cut(s)	1318
PsyI	GACNNNGTC	1 cut(s)	590
RsaI	GTAC	4 cut(s)	782, 1382, 1479, 1574
RsaNI	GTAC	4 cut(s)	781, 1381, 1478, 1573
Rsr2I	CGGWCCG	1 cut(s)	821
RsrII	CGGWCCG	1 cut(s)	821
SapI	GCTCTTC	1 cut(s)	1417
SaqAI	TTAA	5 cut(s)	357, 554, 1200, 1307, 1704
SatI	GCNGC	8 cut(s)	8, 129, 402, 690, 906, 1139, 1596, 1618
Sau3AI	GATC	9 cut(s)	49, 139, 159, 486, 676, 924, 1318, 1435, 1710
Sau96I	GGNCC	3 cut(s)	453, 821, 1518
ScaI	AGTACT	1 cut(s)	1382
SchI	GAGTC	3 cut(s)	934, 956, 1724
ScrFI	CCNGG	3 cut(s)	451, 604, 1000
SduI	GDGCHC	1 cut(s)	291
SfaNI	GCATC	4 cut(s)	1125, 1285, 1669, 1680
SfcI	CTRYAG	4 cut(s)	423, 726, 1624, 1695
SinI	GGWCC	3 cut(s)	453, 821, 1518
SmlI	CTYRAG	1 cut(s)	1306
SmoI	CTYRAG	1 cut(s)	1306
Sse9I	AATT	9 cut(s)	247, 546, 610, 619, 741, 768, 1091, 1283, 1720
SsiI	CCGC	6 cut(s)	31, 54, 639, 796, 1069, 1315
SspI	AATATT	1 cut(s)	1446
SspMI	CTAG	1 cut(s)	1747
StyD4I	CCNGG	3 cut(s)	449, 602, 998
StyI	CCWWGG	1 cut(s)	1653
TaaI	ACNGT	2 cut(s)	319, 1477
TaiI	ACGT	2 cut(s)	721, 1514
TaqI	TCGA	6 cut(s)	304, 312, 574, 950, 1438, 1713
TasI	AATT	9 cut(s)	247, 546, 610, 619, 741, 768, 1091, 1283, 1720
TatI	WGTACW	1 cut(s)	1380
TfiI	GAWTC	6 cut(s)	309, 332, 371, 597, 684, 1327
Tru1I	TTAA	5 cut(s)	357, 554, 1200, 1307, 1704
Tru9I	TTAA	5 cut(s)	357, 554, 1200, 1307, 1704
TscAI	CASTG	3 cut(s)	247, 742, 1497
TseFI	GTSAC	2 cut(s)	319, 1347
TseI	GCWGC	8 cut(s)	7, 128, 401, 689, 905, 1138, 1595, 1617
Tsp45I	GTSAC	2 cut(s)	319, 1347
TspDTI	ATGAA	4 cut(s)	41, 1238, 1447, 1713
TspGWI	ACGGA	4 cut(s)	92, 512, 834, 1598
TspRI	CASTG	3 cut(s)	247, 742, 1497
Tth111I	GACNNNGTC	1 cut(s)	590
Vha464I	CTTAAG	1 cut(s)	1306
VpaK11BI	GGWCC	3 cut(s)	453, 821, 1518
VspI	ATTAAT	1 cut(s)	357
XapI	RAATTY	5 cut(s)	610, 619, 1091, 1283, 1720
XceI	RCATGY	1 cut(s)	1012
XcmI	CCANNNNNNNNNTGG	1 cut(s)	491
XmiI	GTMKAC	1 cut(s)	1106
XspI	CTAG	1 cut(s)	1747
ZrmI	AGTACT	1 cut(s)	1382
Zsp2I	ATGCAT	3 cut(s)	475, 1300, 1531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.