Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0011873

Physical Location & Seq

Genomic Coordinates Reverse (-)

20571629 .. 20579959

Gene Structure 8331 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g26900.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGATCGGGTGACGTGGCGTACCCAAGTCCTCTCGAACCACCTCCACCGCCCCGCCGCCTCTTCCGCTCTGACCGCCAACCCTTGCCTGGGGTATTCTCCGCCGGAGCTGACGGAGCCGTTCGAATTCAACACCAAGGAGATGCGGAAGCTGCTGGACCACCACAATCTGGAGGAGCGGGACTGGCTCTTCGGCCTGATGAGGCAGAGCAAGCTGTTCAATCCCAAAGAGGCCGGCGACGGCCGAGTGTTTGTGTCGCCGGACTATAACCAGAGCATGGAGCAGCAGAGAGAGATGACCATGAAGAGAATCGAGTACTTATTAGATCGCGGAGTTTTCAAAGGGTGGCTCACCGAGAAAGGGGTTGAGGCTGAGCTCAGGAAGTTTGCGCTGCTTGAGGTTTCCGGAATTTACGATCATTCGCTCTCTGTCAAGCTCGGTGTGCATTTCTTTCTATGGGGTGGTGCCATTCTGTTCTTTGGCACAAAGCGCCATCACGACAAGTGGCTGAGGGACACTGAGAATTATGCAATCAAGGGTTGCTTTGCAATGACTGAGTTAGGGCACGGGAGTAATGTTCGAGGAATCGAAACAGTCACCACTTATGATTCAAAAACAGGAGAATTTGTCATTAATACTCCTTGTGAATCTGCTCAGAAGTATTGGATTGGAGGGGCAGCTAATCATGCAACACACACTATAGTCTTTTCACAACTCAACATATCCGGGACCAATCAAGGCGTTCATGCATTTATAGCACAGATCAGGGATGAAAATGGGAACATCTGTCCAAACATCCGTATTGCTGATTGCGGCCATAAAATTGGTCTAAATGGTGTTGATAATGGTCGAATATGGTTTGACAACATGAGAATCCCCAGGGAAAATTTGTTGAATTCAGTAGCAGATGTTACCGCAGAAGGGCAGTATCTGAGTGCAATAAAAGACCCTGATCAGAGATTTGCTGCATTCTTGGCTCCATTGACATCTGGACGTGTAACTATAGCAACCAGTGCAATTTACTCAGCGAAGATAAGTTTAGCGATTGCCATAAGGTATTCTTTGACAAGGCGGGCCTTTTCTCTTACACCAAACGGGCCGGAAGTCCTATTGCTTGATTACCCAAGTCATCAACATCGTCTCTTGCCTCTCCTTGCAAAGACATATGCTATGACTTTTGCTGCAAATCACCTAAAGACGATTTATGTTGGAAGGACTCCTGAGTCCAGCAAAATCATCCATGTTGTTTCAAGCGCATTCAAGGCTACACTTACTTGGCACAACATGCGAACTCTTCAGGAGTGCCGTGAAGCCTGTGGAGGGCAAGGCCTGAAGACTGAAAATCGCATTGGTAATCTGAAAGGTGAATTTGATGTCCAGTCTACTTTTGAGGGGGACAATAATGTTCTGATGCAGCAGGTTAGCAAGGCACTTCTCGCAGAGTTTATCACAGCTCAGAAGAAAAATCAACCATTTAAAGCTTTGGGTTTAGAACATATGAATAAACCTTGCCCTGTCATTCCACCTCACCTTACAAGTTCTACTCTCCAGAGTATCGAATTTCAGATGGATGCATTTTGCTTAAGAGAGCGGGATCTACTGAATCGCTTTGCTCTGGAAGTGTCACAACGGCAAAAACAGGGAGAAAGCAAAGAGTACTCGGTCCTTCTGAGTTATCAGCTTGCCGAGGACTTGGGAAGAGCTTTCTCTGATCGAACAATACTGCAAACCTTCATCGATGTAGAGGCAACTGTACCTGCTGGTTCACTGAAGAATGTCTTAGCTATGTTGAGGACAATGTATGCATTGATTTGTTTGGAAGAGGACGTGACATTCCTCCGATATGGGTACTTATCAACAGATAATGTTACTGCGGTTCAGAAAGAAGTAAGCAGCCTCTGCAGGGAGCTACGACCCCATGCGCTTACCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0050660 GO:0050662 GO:0051791 GO:0055114 GO:0071704 GO:0072329 GO:0097159 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_1 Acyl-CoA_dh_M

Protein Analysis

645

Amino Acids

72.5

Weight (kDa)

7.95

Isoelectric Point (pI)

35.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyl-CoA_dh_M	PF02770	181 - 290	2.1e-12	Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1	PF00441	323 - 479	1.5e-09	Acyl-CoA dehydrogenase, C-terminal domain
ACOX_C_alpha1	PF22924	328 - 479	5.5e-41	Acyl-CoA oxidase, C-alpha1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06290 AT1G06310 AT3G06690
fragaria_vesca	FvH4_6g26900 FvH4_6g26900 FvH4_6g26900
malus_domestica	MD17G1234100.v1.1
prunus_persica	Prupe.3G127000_v2.0.a1
pyrus_communis	pycom17g23740
rosa_chinensis	RchiOBHm_Chr2g0128641
rosa_laevigata	RLG00000019014
rosa_multiflora	Rmu_sc0000837.1_g000086 Rmu_sc0003465.1_g000047
rosa_roxburghii	Rroxscaffold_2G00115420 Rroxscaffold_2G00115900
rosa_rugosa	Rorug02G0279600
rosa_samantha	Rh2DG357400
rosa_wichuraiana	Rw2G026890 Rw2G027150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1222
Acc36I	ACCTGC	2 cut(s)	1408, 1765
AccB1I	GGYRCC	1 cut(s)	464
AccB7I	CCANNNNNTGG	2 cut(s)	169, 277
AccBSI	CCGCTC	3 cut(s)	68, 178, 1591
AccI	GTMKAC	1 cut(s)	1382
AccII	CGCG	1 cut(s)	330
AccIII	TCCGGA	1 cut(s)	404
AclWI	GGATC	2 cut(s)	12, 1602
AcoI	YGGCCR	2 cut(s)	241, 814
AcsI	RAATTY	7 cut(s)	125, 408, 623, 886, 895, 1367, 1559
AcuI	CTGAAG	3 cut(s)	1280, 1352, 1790
AfaI	GTAC	5 cut(s)	22, 317, 1658, 1755, 1850
AfiI	CCNNNNNNNGG	8 cut(s)	88, 89, 169, 277, 360, 921, 1320, 1903
AflII	CTTAAG	1 cut(s)	1582
AflIII	ACRYGT	1 cut(s)	994
AgsI	TTSAA	7 cut(s)	130, 220, 340, 612, 895, 1251, 1261
AjiI	CACGTC	3 cut(s)	15, 995, 1828
AjnI	CCWGG	2 cut(s)	87, 878
AjuI	GAANNNNNNNTTGG	2 cut(s)	1332, 1364
Alw21I	GWGCWC	1 cut(s)	378
Alw26I	GTCTC	1 cut(s)	1145
AlwI	GGATC	2 cut(s)	12, 1602
AlwNI	CAGNNNCTG	2 cut(s)	931, 1899
Aor13HI	TCCGGA	1 cut(s)	404
AoxI	GGCC	7 cut(s)	193, 231, 241, 814, 1074, 1097, 1327
ApeKI	GCWGC	8 cut(s)	151, 283, 391, 677, 965, 1181, 1414, 1893
ApoI	RAATTY	7 cut(s)	125, 408, 623, 886, 895, 1367, 1559
ArsI	GACNNNNNNTTYG	2 cut(s)	173, 205
AseI	ATTAAT	1 cut(s)	633
AspLEI	GCGC	4 cut(s)	391, 492, 1256, 1924
AspS9I	GGNCC	5 cut(s)	157, 729, 1074, 1097, 1663
AsuC2I	CCSGG	1 cut(s)	727
AsuHPI	GGTGA	6 cut(s)	22, 343, 589, 1181, 1376, 1520
AsuII	TTCGAA	1 cut(s)	123
AvaII	GGWCC	3 cut(s)	157, 729, 1663
BaeGI	GKGCMC	1 cut(s)	567
BanI	GGYRCC	1 cut(s)	464
BanII	GRGCYC	1 cut(s)	378
BbsI	GAAGAC	1 cut(s)	1340
Bbv12I	GWGCWC	1 cut(s)	378
BbvCI	CCTCAGC	1 cut(s)	509
BbvI	GCAGC	8 cut(s)	138, 295, 378, 689, 952, 1168, 1426, 1905
BccI	CCATC	2 cut(s)	501, 1561
BceAI	ACGGC	4 cut(s)	103, 256, 1290, 1646
BciT130I	CCWGG	2 cut(s)	89, 880
BclI	TGATCA	1 cut(s)	952
BcnI	CCSGG	1 cut(s)	727
BcoDI	GTCTC	1 cut(s)	1145
BfmI	CTRYAG	3 cut(s)	699, 1002, 1900
BfoI	RGCGCY	1 cut(s)	493
BfrI	CTTAAG	1 cut(s)	1582
BfuAI	ACCTGC	2 cut(s)	1408, 1765
BlpI	GCTNAGC	1 cut(s)	372
BmcAI	AGTACT	2 cut(s)	317, 1658
Bme1390I	CCNGG	3 cut(s)	89, 727, 880
Bme18I	GGWCC	3 cut(s)	157, 729, 1663
BmgBI	CACGTC	3 cut(s)	15, 995, 1828
BmgT120I	GGNCC	5 cut(s)	157, 729, 1074, 1097, 1663
BmiI	GGNNCC	4 cut(s)	117, 466, 730, 978
BmrFI	CCNGG	3 cut(s)	89, 727, 880
BmsI	GCATC	3 cut(s)	132, 1401, 1561
BpiI	GAAGAC	1 cut(s)	1340
BpmI	CTGGAG	2 cut(s)	191, 1532
Bpu10I	CCTNAGC	2 cut(s)	377, 509
Bpu1102I	GCTNAGC	1 cut(s)	372
Bpu14I	TTCGAA	1 cut(s)	123
BpuEI	CTTGAG	1 cut(s)	416
BpuMI	CCSGG	1 cut(s)	727
Bsa29I	ATCGAT	1 cut(s)	1737
BsaJI	CCNNGG	5 cut(s)	88, 135, 878, 879, 1686
BsaWI	WCCGGW	1 cut(s)	404
BsaXI	ACNNNNNCTCC	2 cut(s)	612, 642
Bsc4I	CCNNNNNNNGG	8 cut(s)	88, 89, 169, 277, 360, 921, 1320, 1903
Bse118I	RCCGGY	1 cut(s)	233
Bse1I	ACTGG	3 cut(s)	188, 1011, 1378
Bse3DI	GCAATG	1 cut(s)	555
BseAI	TCCGGA	1 cut(s)	404
BseBI	CCWGG	2 cut(s)	89, 880
BseCI	ATCGAT	1 cut(s)	1737
BseDI	CCNNGG	5 cut(s)	88, 135, 878, 879, 1686
BseGI	GGATG	4 cut(s)	775, 795, 1236, 1576
BseLI	CCNNNNNNNGG	8 cut(s)	88, 89, 169, 277, 360, 921, 1320, 1903
BseMI	GCAATG	1 cut(s)	555
BseNI	ACTGG	3 cut(s)	188, 1011, 1378
BseRI	GAGGAG	1 cut(s)	188
BseSI	GKGCMC	1 cut(s)	567
BseX3I	CGGCCG	1 cut(s)	241
BseXI	GCAGC	8 cut(s)	138, 295, 378, 689, 952, 1168, 1426, 1905
Bsh1236I	CGCG	1 cut(s)	330
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	7 cut(s)	195, 233, 243, 816, 1076, 1099, 1329
BshNI	GGYRCC	1 cut(s)	464
BshVI	ATCGAT	1 cut(s)	1737
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	1 cut(s)	378
BsiSI	CCGG	6 cut(s)	104, 234, 260, 405, 726, 1100
BslFI	GGGAC	4 cut(s)	194, 527, 742, 1409
BslI	CCNNNNNNNGG	8 cut(s)	88, 89, 169, 277, 360, 921, 1320, 1903
BsmAI	GTCTC	1 cut(s)	1145
BsmBI	CGTCTC	1 cut(s)	1145
BsmFI	GGGAC	4 cut(s)	194, 527, 742, 1409
BsmI	GAATGC	2 cut(s)	968, 1256
BsnI	GGCC	7 cut(s)	195, 233, 243, 816, 1076, 1099, 1329
Bsp119I	TTCGAA	1 cut(s)	123
Bsp1286I	GDGCHC	2 cut(s)	378, 567
Bsp13I	TCCGGA	1 cut(s)	404
Bsp143I	GATC	7 cut(s)	4, 325, 415, 762, 952, 1594, 1711
Bsp1720I	GCTNAGC	1 cut(s)	372
BspANI	GGCC	7 cut(s)	195, 233, 243, 816, 1076, 1099, 1329
BspDI	ATCGAT	1 cut(s)	1737
BspEI	TCCGGA	1 cut(s)	404
BspFNI	CGCG	1 cut(s)	330
BspLI	GGNNCC	4 cut(s)	117, 466, 730, 978
BspMAI	CTGCAG	1 cut(s)	1904
BspMI	ACCTGC	2 cut(s)	1408, 1765
BspPI	GGATC	2 cut(s)	12, 1602
BspQI	GCTCTTC	2 cut(s)	194, 1693
BspT104I	TTCGAA	1 cut(s)	123
BspT107I	GGYRCC	1 cut(s)	464
BspTI	CTTAAG	1 cut(s)	1582
BsrBI	CCGCTC	3 cut(s)	68, 178, 1591
BsrDI	GCAATG	1 cut(s)	555
BsrFI	RCCGGY	1 cut(s)	233
BsrI	ACTGG	3 cut(s)	188, 1011, 1378
BssAI	RCCGGY	1 cut(s)	233
BssECI	CCNNGG	5 cut(s)	88, 135, 878, 879, 1686
BssMI	GATC	7 cut(s)	4, 325, 415, 762, 952, 1594, 1711
BssT1I	CCWWGG	1 cut(s)	135
Bst2UI	CCWGG	2 cut(s)	89, 880
Bst4CI	ACNGT	2 cut(s)	595, 1753
Bst6I	CTCTTC	6 cut(s)	67, 194, 299, 1299, 1693, 1815
BstAFI	CTTAAG	1 cut(s)	1582
BstAPI	GCANNNNNTGC	3 cut(s)	1013, 1285, 1899
BstBI	TTCGAA	1 cut(s)	123
BstC8I	GCNNGC	4 cut(s)	212, 235, 1074, 1683
BstF5I	GGATG	4 cut(s)	775, 795, 1236, 1576
BstFNI	CGCG	1 cut(s)	330
BstH2I	RGCGCY	1 cut(s)	493
BstHHI	GCGC	4 cut(s)	391, 492, 1256, 1924
BstKTI	GATC	7 cut(s)	7, 328, 418, 765, 955, 1597, 1714
BstMAI	GTCTC	1 cut(s)	1145
BstMBI	GATC	7 cut(s)	4, 325, 415, 762, 952, 1594, 1711
BstMCI	CGRYCG	1 cut(s)	244
BstNI	CCWGG	2 cut(s)	89, 880
BstNSI	RCATGY	1 cut(s)	1288
BstSCI	CCNGG	3 cut(s)	87, 725, 878
BstSFI	CTRYAG	3 cut(s)	699, 1002, 1900
BstSLI	GKGCMC	1 cut(s)	567
BstUI	CGCG	1 cut(s)	330
BstV1I	GCAGC	8 cut(s)	138, 295, 378, 689, 952, 1168, 1426, 1905
BstV2I	GAAGAC	1 cut(s)	1340
BstX2I	RGATCY	1 cut(s)	1594
BstXI	CCANNNNNNTGG	1 cut(s)	824
BstYI	RGATCY	1 cut(s)	1594
BstZI	CGGCCG	1 cut(s)	241
Bsu15I	ATCGAT	1 cut(s)	1737
BsuRI	GGCC	7 cut(s)	195, 233, 243, 816, 1076, 1099, 1329
BsuTUI	ATCGAT	1 cut(s)	1737
BtrI	CACGTC	3 cut(s)	15, 995, 1828
BtsCI	GGATG	4 cut(s)	775, 795, 1236, 1576
BtsIMutI	CAGTG	3 cut(s)	516, 1018, 1766
BveI	ACCTGC	2 cut(s)	1408, 1765
Cac8I	GCNNGC	4 cut(s)	212, 235, 1074, 1683
CaiI	CAGNNNCTG	2 cut(s)	931, 1899
CfoI	GCGC	4 cut(s)	391, 492, 1256, 1924
Cfr10I	RCCGGY	1 cut(s)	233
Cfr13I	GGNCC	5 cut(s)	157, 729, 1074, 1097, 1663
ClaI	ATCGAT	1 cut(s)	1737
Csp6I	GTAC	5 cut(s)	21, 316, 1657, 1754, 1849
CviAII	CATG	8 cut(s)	277, 301, 686, 746, 868, 1241, 1285, 1919
CviQI	GTAC	5 cut(s)	21, 316, 1657, 1754, 1849
DpnI	GATC	7 cut(s)	6, 327, 417, 764, 954, 1596, 1713
DpnII	GATC	7 cut(s)	4, 325, 415, 762, 952, 1594, 1711
DraI	TTTAAA	1 cut(s)	1477
DrdI	GACNNNNNNGTC	1 cut(s)	1222
DseDI	GACNNNNNNGTC	1 cut(s)	1222
EaeI	YGGCCR	2 cut(s)	241, 814
EagI	CGGCCG	1 cut(s)	241
Eam1104I	CTCTTC	6 cut(s)	67, 194, 299, 1299, 1693, 1815
EarI	CTCTTC	6 cut(s)	67, 194, 299, 1299, 1693, 1815
EciI	GGCGGA	1 cut(s)	90
Ecl136II	GAGCTC	1 cut(s)	376
EclXI	CGGCCG	1 cut(s)	241
Eco130I	CCWWGG	1 cut(s)	135
Eco147I	AGGCCT	1 cut(s)	1329
Eco24I	GRGCYC	1 cut(s)	378
Eco47I	GGWCC	3 cut(s)	157, 729, 1663
Eco52I	CGGCCG	1 cut(s)	241
Eco53kI	GAGCTC	1 cut(s)	376
Eco57I	CTGAAG	3 cut(s)	1280, 1352, 1790
EcoICRI	GAGCTC	1 cut(s)	376
EcoRI	GAATTC	2 cut(s)	125, 895
EcoRII	CCWGG	2 cut(s)	87, 878
EcoT14I	CCWWGG	1 cut(s)	135
EcoT22I	ATGCAT	3 cut(s)	751, 1576, 1807
EcoT38I	GRGCYC	1 cut(s)	378
ErhI	CCWWGG	1 cut(s)	135
Esp3I	CGTCTC	1 cut(s)	1145
FaeI	CATG	8 cut(s)	280, 304, 689, 749, 871, 1244, 1288, 1922
FalI	AAGNNNNNCTT	6 cut(s)	527, 559, 1045, 1077, 1763, 1795
FaqI	GGGAC	4 cut(s)	194, 527, 742, 1409
FatI	CATG	8 cut(s)	276, 300, 685, 745, 867, 1240, 1284, 1918
FauI	CCCGC	4 cut(s)	61, 171, 1065, 1584
FauNDI	CATATG	2 cut(s)	1165, 1497
FbaI	TGATCA	1 cut(s)	952
FblI	GTMKAC	1 cut(s)	1382
FokI	GGATG	4 cut(s)	782, 782, 1223, 1583
FriOI	GRGCYC	1 cut(s)	378
GlaI	GCGC	4 cut(s)	390, 491, 1255, 1923
GsuI	CTGGAG	2 cut(s)	191, 1532
HaeII	RGCGCY	1 cut(s)	493
HaeIII	GGCC	7 cut(s)	195, 233, 243, 816, 1076, 1099, 1329
HapII	CCGG	6 cut(s)	104, 234, 260, 405, 726, 1100
HhaI	GCGC	4 cut(s)	391, 492, 1256, 1924
Hin1II	CATG	8 cut(s)	280, 304, 689, 749, 871, 1244, 1288, 1922
Hin6I	GCGC	4 cut(s)	389, 490, 1254, 1922
HinP1I	GCGC	4 cut(s)	389, 490, 1254, 1922
HindIII	AAGCTT	1 cut(s)	1479
HinfI	GANTC	8 cut(s)	309, 585, 608, 647, 873, 1216, 1223, 1603
HpaII	CCGG	6 cut(s)	104, 234, 260, 405, 726, 1100
HphI	GGTGA	6 cut(s)	22, 343, 589, 1181, 1376, 1520
Hpy166II	GTNNAC	2 cut(s)	1383, 1766
Hpy8I	GTNNAC	2 cut(s)	1383, 1766
Hpy99I	CGWCG	1 cut(s)	242
HpyAV	CCTTC	4 cut(s)	914, 1206, 1676, 1741
HpyCH4III	ACNGT	2 cut(s)	595, 1753
HpyCH4IV	ACGT	3 cut(s)	14, 994, 1827
HpySE526I	ACGT	3 cut(s)	14, 994, 1827
Hsp92II	CATG	8 cut(s)	280, 304, 689, 749, 871, 1244, 1288, 1922
HspAI	GCGC	4 cut(s)	389, 490, 1254, 1922
Kpn2I	TCCGGA	1 cut(s)	404
KroI	GCCGGC	1 cut(s)	233
KroNI	GCCGGC	1 cut(s)	235
Ksp22I	TGATCA	1 cut(s)	952
Kzo9I	GATC	7 cut(s)	4, 325, 415, 762, 952, 1594, 1711
LguI	GCTCTTC	2 cut(s)	194, 1693
LmnI	GCTCC	6 cut(s)	106, 115, 175, 280, 982, 1906
Lsp1109I	GCAGC	8 cut(s)	138, 295, 378, 689, 952, 1168, 1426, 1905
LweI	GCATC	3 cut(s)	132, 1401, 1561
MaeII	ACGT	3 cut(s)	14, 994, 1827
MaeIII	GTNAC	7 cut(s)	10, 595, 910, 997, 1623, 1828, 1867
MalI	GATC	7 cut(s)	6, 327, 417, 764, 954, 1596, 1713
MbiI	CCGCTC	3 cut(s)	68, 178, 1591
MboI	GATC	7 cut(s)	4, 325, 415, 762, 952, 1594, 1711
MflI	RGATCY	1 cut(s)	1594
MhlI	GDGCHC	2 cut(s)	378, 567
MlyI	GAGTC	2 cut(s)	1210, 1232
MmeI	TCCRAC	1 cut(s)	1189
Mph1103I	ATGCAT	3 cut(s)	751, 1576, 1807
MroI	TCCGGA	1 cut(s)	404
MroNI	GCCGGC	1 cut(s)	233
MseI	TTAA	3 cut(s)	633, 1476, 1583
MspCI	CTTAAG	1 cut(s)	1582
MspI	CCGG	6 cut(s)	104, 234, 260, 405, 726, 1100
MspR9I	CCNGG	3 cut(s)	89, 727, 880
Mva1269I	GAATGC	2 cut(s)	968, 1256
MvaI	CCWGG	2 cut(s)	89, 880
MvnI	CGCG	1 cut(s)	330
NaeI	GCCGGC	1 cut(s)	235
NciI	CCSGG	1 cut(s)	727
NdeI	CATATG	2 cut(s)	1165, 1497
NdeII	GATC	7 cut(s)	4, 325, 415, 762, 952, 1594, 1711
NgoMIV	GCCGGC	1 cut(s)	233
NlaIII	CATG	8 cut(s)	280, 304, 689, 749, 871, 1244, 1288, 1922
NlaIV	GGNNCC	4 cut(s)	117, 466, 730, 978
NmeAIII	GCCGAG	2 cut(s)	269, 1711
NmuCI	GTSAC	4 cut(s)	10, 595, 1623, 1828
NsiI	ATGCAT	3 cut(s)	751, 1576, 1807
NspI	RCATGY	1 cut(s)	1288
NspV	TTCGAA	1 cut(s)	123
PasI	CCCWGGG	1 cut(s)	879
PceI	AGGCCT	1 cut(s)	1329
PciSI	GCTCTTC	2 cut(s)	194, 1693
PctI	GAATGC	2 cut(s)	968, 1256
PdiI	GCCGGC	1 cut(s)	235
PfeI	GAWTC	6 cut(s)	309, 585, 608, 647, 873, 1603
PflMI	CCANNNNNTGG	2 cut(s)	169, 277
PfoI	TCCNGGA	1 cut(s)	725
PleI	GAGTC	2 cut(s)	1210, 1231
PpsI	GAGTC	2 cut(s)	1210, 1231
PshBI	ATTAAT	1 cut(s)	633
Psp124BI	GAGCTC	1 cut(s)	378
Psp6I	CCWGG	2 cut(s)	87, 878
PspGI	CCWGG	2 cut(s)	87, 878
PspN4I	GGNNCC	4 cut(s)	117, 466, 730, 978
PspPI	GGNCC	5 cut(s)	157, 729, 1074, 1097, 1663
PstI	CTGCAG	1 cut(s)	1904
PstNI	CAGNNNCTG	2 cut(s)	931, 1899
PsuI	RGATCY	1 cut(s)	1594
RsaI	GTAC	5 cut(s)	22, 317, 1658, 1755, 1850
RsaNI	GTAC	5 cut(s)	21, 316, 1657, 1754, 1849
SacI	GAGCTC	1 cut(s)	378
SapI	GCTCTTC	2 cut(s)	194, 1693
SaqAI	TTAA	3 cut(s)	633, 1476, 1583
Sau3AI	GATC	7 cut(s)	4, 325, 415, 762, 952, 1594, 1711
Sau96I	GGNCC	5 cut(s)	157, 729, 1074, 1097, 1663
ScaI	AGTACT	2 cut(s)	317, 1658
SchI	GAGTC	2 cut(s)	1210, 1232
ScrFI	CCNGG	3 cut(s)	89, 727, 880
SduI	GDGCHC	2 cut(s)	378, 567
SfaNI	GCATC	3 cut(s)	132, 1401, 1561
SfcI	CTRYAG	3 cut(s)	699, 1002, 1900
SfuI	TTCGAA	1 cut(s)	123
SinI	GGWCC	3 cut(s)	157, 729, 1663
SmlI	CTYRAG	2 cut(s)	395, 1582
SmoI	CTYRAG	2 cut(s)	395, 1582
SseBI	AGGCCT	1 cut(s)	1329
SstI	GAGCTC	1 cut(s)	378
StuI	AGGCCT	1 cut(s)	1329
StyD4I	CCNGG	3 cut(s)	87, 725, 878
StyI	CCWWGG	1 cut(s)	135
TaaI	ACNGT	2 cut(s)	595, 1753
TaiI	ACGT	3 cut(s)	17, 997, 1830
TaqI	TCGA	9 cut(s)	35, 123, 312, 580, 588, 850, 1557, 1714, 1737
TaqII	GACCGA	1 cut(s)	1651
TatI	WGTACW	2 cut(s)	315, 1656
TauI	GCSGC	2 cut(s)	59, 816
TfiI	GAWTC	6 cut(s)	309, 585, 608, 647, 873, 1603
Tru1I	TTAA	3 cut(s)	633, 1476, 1583
Tru9I	TTAA	3 cut(s)	633, 1476, 1583
TscAI	CASTG	3 cut(s)	523, 1018, 1773
TseFI	GTSAC	4 cut(s)	10, 595, 1623, 1828
TseI	GCWGC	8 cut(s)	151, 283, 391, 677, 965, 1181, 1414, 1893
Tsp45I	GTSAC	4 cut(s)	10, 595, 1623, 1828
TspDTI	ATGAA	5 cut(s)	317, 734, 786, 1514, 1723
TspGWI	ACGGA	2 cut(s)	128, 788
TspRI	CASTG	3 cut(s)	523, 1018, 1773
Van91I	CCANNNNNTGG	2 cut(s)	169, 277
Vha464I	CTTAAG	1 cut(s)	1582
VpaK11BI	GGWCC	3 cut(s)	157, 729, 1663
VspI	ATTAAT	1 cut(s)	633
XapI	RAATTY	7 cut(s)	125, 408, 623, 886, 895, 1367, 1559
XceI	RCATGY	1 cut(s)	1288
XcmI	CCANNNNNNNNNTGG	1 cut(s)	85
XmiI	GTMKAC	1 cut(s)	1382
ZrmI	AGTACT	2 cut(s)	317, 1658
Zsp2I	ATGCAT	3 cut(s)	751, 1576, 1807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.