Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003465.1

Orthogroup ID

OG0011873

Physical Location & Seq

Genomic Coordinates Reverse (-)

209789 .. 221139

Gene Structure 11351 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003465.1_g000047.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

atgcttcgtccggcggcgcgtcttgagggcgaggatcttcacgcttcagatcggtctcgatctggagcgataaaggctgagagcggtggcgatggtgattgcagggtgcggaggacggtctgtgaaggggtttgcatcggttctaggtctggcaatgcgacgttaagcgacgctcatccttccggaggtgcggcgctgtgcgaagctctgcttggcgagggtgcgacgatggattggcgattcagcagcggtggtgatgaggcggcaacagcgggtcaaattggggcgttgggttgggccggactcttaggcctatacagtcacttggccatttgcttgggtattgggcctgtgatacttctttgggcccgaagtgggcgacgtgggctctgtcccggactgcacaccttggttgccttgtctactctggttaggtggcgagttccttgcttcgtcaaatggtcgcagcctcccagtggcaggacgaaatttagtgtcaccgaaattgtttttcggtggaaccatgcctactacatggacgccgagctttatgttttcgctgcgacgaggctgctcgaagggtttgtggctgaactgtatgttaatttatacgatctattggctcatcctatcggctgtcatttctggagattcgcagcattcttggctccattgacatttggacgtgtaactatagcaaccagtgcaatttatacagcaaagataagtttagcaattgccataaggtactctttgacaaggcgggctttttcggttacaccaaacggaccggaagttctattgcttgattacccaagtcatcaacaccggctcttgcctctccttgcaaagacatatgctatgacttttgctgcaaatcacctaaagatgatctatgttaggaggactcctgagtcgagcaaaaccatccatgttgtttcaagtgcattcaaggctacacttacctggcataacatgcgaactcttcaggagtgccgtgaagcctgtggagggcaaggtctgaagactgaaaaccgcattggtaatctgaaaggtgaatttgatgtgcagtcgacttttgagggggacaataatgttctgatgcagcaggtcagcaaggcacttcttgcagagtttataacagctcagaagagaagtaaaccatttaaagctttgggattagaacatatgaataaaccttgccctgtcattccatctcaccttacaagttctactcttcagagtatcgaatttcagatggatgcattttgcttaagagagcgggatctactgaatcgctttgctgtggaagtgtcacaacgacaaaaacagggagaaagaaaagagtactcggttcttctgagttatcagcttgcagatgatttgggaagagctttctccgatcgaacaatattgcaaaccttcatcgatgtagaggcaactgtacctgctggttcactgaagaatgtcttagctacgttgaggaccttgtatgcattgatttgcttggaagaggatgtggcattcctccgatacgggtacttatcaacggataatgttgctgctgtgaggaaagaagtaagcagcctctgcagagagctacgaccccatgcacttgccttggtcagttcttttggcatccctgatgctttcctcggtcctatagcttttaactggattgagtcaaattcatggtcttcagttcagcagcactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0050660 GO:0050662 GO:0051791 GO:0055114 GO:0071704 GO:0072329 GO:0097159 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_1 Acyl-CoA_dh_M

Protein Analysis

571

Amino Acids

63.0

Weight (kDa)

8.76

Isoelectric Point (pI)

45.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06290 AT1G06310 AT3G06690
fragaria_vesca	FvH4_6g26900 FvH4_6g26900 FvH4_6g26900
malus_domestica	MD17G1234100.v1.1
prunus_persica	Prupe.3G127000_v2.0.a1
pyrus_communis	pycom17g23740
rosa_chinensis	RchiOBHm_Chr2g0128641
rosa_laevigata	RLG00000019014
rosa_multiflora	Rmu_sc0000837.1_g000086 Rmu_sc0003465.1_g000047
rosa_roxburghii	Rroxscaffold_2G00115420 Rroxscaffold_2G00115900
rosa_rugosa	Rorug02G0279600
rosa_samantha	Rh2DG357400
rosa_wichuraiana	Rw2G026890 Rw2G027150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1139
AasI	GACNNNNNNGTC	1 cut(s)	913
Acc36I	ACCTGC	2 cut(s)	1099, 1456
AccBSI	CCGCTC	2 cut(s)	84, 1282
AccI	GTMKAC	2 cut(s)	422, 1073
AccII	CGCG	1 cut(s)	19
AccIII	TCCGGA	1 cut(s)	182
AclWI	GGATC	2 cut(s)	42, 1293
AcoI	YGGCCR	1 cut(s)	327
AcsI	RAATTY	4 cut(s)	488, 1058, 1250, 1687
AcuI	CTGAAG	6 cut(s)	30, 971, 1043, 1223, 1481, 1683
AcyI	GRCGYC	1 cut(s)	540
AfaI	GTAC	4 cut(s)	749, 1349, 1446, 1541
AfiI	CCNNNNNNNGG	5 cut(s)	185, 375, 476, 480, 1011
AflII	CTTAAG	1 cut(s)	1273
AflIII	ACRYGT	1 cut(s)	685
AgsI	TTSAA	2 cut(s)	942, 952
AjiI	CACGTC	2 cut(s)	383, 686
AjnI	CCWGG	1 cut(s)	965
AjuI	GAANNNNNNNTTGG	4 cut(s)	195, 227, 1023, 1055
AloI	GAACNNNNNNTCC	2 cut(s)	780, 812
AluBI	AGCT	9 cut(s)	206, 547, 1145, 1172, 1372, 1394, 1475, 1600, 1667
AluI	AGCT	9 cut(s)	206, 547, 1145, 1172, 1372, 1394, 1475, 1600, 1667
Alw26I	GTCTC	1 cut(s)	60
AlwI	GGATC	2 cut(s)	42, 1293
AlwNI	CAGNNNCTG	1 cut(s)	1590
Aor13HI	TCCGGA	1 cut(s)	182
AoxI	GGCC	5 cut(s)	297, 310, 327, 347, 366
ApaI	GGGCCC	1 cut(s)	370
ApoI	RAATTY	4 cut(s)	488, 1058, 1250, 1687
ArsI	GACNNNNNNTTYG	2 cut(s)	1679, 1711
AspLEI	GCGC	2 cut(s)	19, 196
AspS9I	GGNCC	7 cut(s)	297, 347, 366, 367, 788, 1485, 1658
AsuC2I	CCSGG	1 cut(s)	396
AsuHPI	GGTGA	6 cut(s)	107, 266, 490, 872, 1067, 1211
AvaII	GGWCC	3 cut(s)	788, 1485, 1658
BaeGI	GKGCMC	1 cut(s)	370
BalI	TGGCCA	1 cut(s)	329
BanII	GRGCYC	2 cut(s)	370, 390
BbsI	GAAGAC	2 cut(s)	1031, 1689
BbvI	GCAGC	9 cut(s)	258, 478, 547, 558, 668, 859, 1117, 1549, 1596
BccI	CCATC	5 cut(s)	86, 223, 935, 1222, 1252
BceAI	ACGGC	1 cut(s)	981
BcgI	CGANNNNNNTGC	4 cut(s)	429, 463, 553, 587
BciT130I	CCWGG	1 cut(s)	967
BcnI	CCSGG	1 cut(s)	396
BcoDI	GTCTC	1 cut(s)	60
BfaI	CTAG	2 cut(s)	144, 1714
BfmI	CTRYAG	3 cut(s)	693, 1591, 1662
BfoI	RGCGCY	1 cut(s)	197
BfrI	CTTAAG	1 cut(s)	1273
BfuAI	ACCTGC	2 cut(s)	1099, 1456
BmcAI	AGTACT	1 cut(s)	1349
Bme1390I	CCNGG	2 cut(s)	396, 967
Bme18I	GGWCC	3 cut(s)	788, 1485, 1658
BmgBI	CACGTC	2 cut(s)	383, 686
BmgT120I	GGNCC	7 cut(s)	297, 347, 366, 367, 788, 1485, 1658
BmiI	GGNNCC	3 cut(s)	368, 521, 669
BmrFI	CCNGG	2 cut(s)	396, 967
BmrI	ACTGGG	1 cut(s)	468
BmsI	GCATC	5 cut(s)	144, 1092, 1252, 1636, 1647
BmuI	ACTGGG	1 cut(s)	468
BpiI	GAAGAC	2 cut(s)	1031, 1689
BpmI	CTGGAG	2 cut(s)	84, 667
BpuEI	CTTGAG	1 cut(s)	44
BpuMI	CCSGG	1 cut(s)	396
Bsa29I	ATCGAT	1 cut(s)	1428
BsaHI	GRCGYC	1 cut(s)	540
BsaI	GGTCTC	1 cut(s)	60
BsaJI	CCNNGG	3 cut(s)	408, 1620, 1654
BsaWI	WCCGGW	2 cut(s)	182, 790
Bsc4I	CCNNNNNNNGG	5 cut(s)	185, 375, 476, 480, 1011
Bse118I	RCCGGY	1 cut(s)	828
Bse1I	ACTGG	3 cut(s)	474, 702, 1679
Bse3DI	GCAATG	1 cut(s)	160
BseAI	TCCGGA	1 cut(s)	182
BseBI	CCWGG	1 cut(s)	967
BseCI	ATCGAT	1 cut(s)	1428
BseDI	CCNNGG	3 cut(s)	408, 1620, 1654
BseGI	GGATG	6 cut(s)	175, 625, 927, 1267, 1522, 1638
BseLI	CCNNNNNNNGG	5 cut(s)	185, 375, 476, 480, 1011
BseMI	GCAATG	1 cut(s)	160
BseMII	CTCAG	4 cut(s)	69, 903, 1160, 1352
BseNI	ACTGG	3 cut(s)	474, 702, 1679
BseSI	GKGCMC	1 cut(s)	370
BseXI	GCAGC	9 cut(s)	258, 478, 547, 558, 668, 859, 1117, 1549, 1596
BsgI	GTGCAG	2 cut(s)	386, 1088
Bsh1236I	CGCG	1 cut(s)	19
Bsh1285I	CGRYCG	1 cut(s)	1405
BshFI	GGCC	5 cut(s)	299, 312, 329, 349, 368
BshVI	ATCGAT	1 cut(s)	1428
BsiEI	CGRYCG	1 cut(s)	1405
BsiSI	CCGG	6 cut(s)	11, 183, 300, 396, 791, 829
BslFI	GGGAC	2 cut(s)	378, 1100
BslI	CCNNNNNNNGG	5 cut(s)	185, 375, 476, 480, 1011
BsmAI	GTCTC	1 cut(s)	60
BsmFI	GGGAC	2 cut(s)	378, 1100
BsmI	GAATGC	3 cut(s)	659, 947, 1523
BsnI	GGCC	5 cut(s)	299, 312, 329, 349, 368
Bso31I	GGTCTC	1 cut(s)	60
Bsp120I	GGGCCC	1 cut(s)	366
Bsp1286I	GDGCHC	2 cut(s)	370, 390
Bsp13I	TCCGGA	1 cut(s)	182
Bsp143I	GATC	7 cut(s)	34, 49, 59, 613, 891, 1285, 1402
BspANI	GGCC	5 cut(s)	299, 312, 329, 349, 368
BspCNI	CTCAG	4 cut(s)	70, 904, 1159, 1353
BspDI	ATCGAT	1 cut(s)	1428
BspEI	TCCGGA	1 cut(s)	182
BspFNI	CGCG	1 cut(s)	19
BspLI	GGNNCC	3 cut(s)	368, 521, 669
BspMAI	CTGCAG	1 cut(s)	1595
BspMI	ACCTGC	2 cut(s)	1099, 1456
BspPI	GGATC	2 cut(s)	42, 1293
BspQI	GCTCTTC	1 cut(s)	1384
BspTI	CTTAAG	1 cut(s)	1273
BspTNI	GGTCTC	1 cut(s)	60
BsrBI	CCGCTC	2 cut(s)	84, 1282
BsrDI	GCAATG	1 cut(s)	160
BsrFI	RCCGGY	1 cut(s)	828
BsrI	ACTGG	3 cut(s)	474, 702, 1679
BssAI	RCCGGY	1 cut(s)	828
BssECI	CCNNGG	3 cut(s)	408, 1620, 1654
BssMI	GATC	7 cut(s)	34, 49, 59, 613, 891, 1285, 1402
BssNI	GRCGYC	1 cut(s)	540
BssT1I	CCWWGG	2 cut(s)	408, 1620
Bst2UI	CCWGG	1 cut(s)	967
Bst4CI	ACNGT	4 cut(s)	118, 320, 597, 1444
Bst6I	CTCTTC	5 cut(s)	990, 1145, 1242, 1384, 1506
BstACI	GRCGYC	1 cut(s)	540
BstAFI	CTTAAG	1 cut(s)	1273
BstAPI	GCANNNNNTGC	4 cut(s)	704, 976, 1127, 1590
BstC8I	GCNNGC	2 cut(s)	765, 1374
BstDEI	CTNAG	6 cut(s)	78, 307, 912, 1146, 1361, 1471
BstENI	CCTNNNNNAGG	1 cut(s)	183
BstF5I	GGATG	6 cut(s)	175, 625, 927, 1267, 1522, 1638
BstFNI	CGCG	1 cut(s)	19
BstH2I	RGCGCY	1 cut(s)	197
BstHHI	GCGC	2 cut(s)	19, 196
BstKTI	GATC	7 cut(s)	37, 52, 62, 616, 894, 1288, 1405
BstMAI	GTCTC	1 cut(s)	60
BstMBI	GATC	7 cut(s)	34, 49, 59, 613, 891, 1285, 1402
BstMCI	CGRYCG	1 cut(s)	1405
BstMWI	GCNNNNNNNGC	9 cut(s)	74, 269, 385, 665, 704, 953, 976, 1127, 1590
BstNI	CCWGG	1 cut(s)	967
BstNSI	RCATGY	1 cut(s)	979
BstSCI	CCNGG	2 cut(s)	394, 965
BstSFI	CTRYAG	3 cut(s)	693, 1591, 1662
BstSLI	GKGCMC	1 cut(s)	370
BstUI	CGCG	1 cut(s)	19
BstV1I	GCAGC	9 cut(s)	258, 478, 547, 558, 668, 859, 1117, 1549, 1596
BstV2I	GAAGAC	2 cut(s)	1031, 1689
BstX2I	RGATCY	2 cut(s)	34, 1285
BstXI	CCANNNNNNTGG	1 cut(s)	337
BstYI	RGATCY	2 cut(s)	34, 1285
Bsu15I	ATCGAT	1 cut(s)	1428
BsuRI	GGCC	5 cut(s)	299, 312, 329, 349, 368
BsuTUI	ATCGAT	1 cut(s)	1428
BtgZI	GCGATG	1 cut(s)	105
BtrI	CACGTC	2 cut(s)	383, 686
BtsCI	GGATG	6 cut(s)	175, 625, 927, 1267, 1522, 1638
BtsIMutI	CAGTG	3 cut(s)	481, 709, 1457
BveI	ACCTGC	2 cut(s)	1099, 1456
Cac8I	GCNNGC	2 cut(s)	765, 1374
CaiI	CAGNNNCTG	1 cut(s)	1590
CfoI	GCGC	2 cut(s)	19, 196
Cfr10I	RCCGGY	1 cut(s)	828
Cfr13I	GGNCC	7 cut(s)	297, 347, 366, 367, 788, 1485, 1658
ClaI	ATCGAT	1 cut(s)	1428
CpoI	CGGWCCG	1 cut(s)	788
CseI	GACGC	3 cut(s)	8, 179, 548
Csp6I	GTAC	4 cut(s)	748, 1348, 1445, 1540
CspI	CGGWCCG	1 cut(s)	788
CviAII	CATG	6 cut(s)	524, 535, 932, 976, 1610, 1692
CviQI	GTAC	4 cut(s)	748, 1348, 1445, 1540
DdeI	CTNAG	6 cut(s)	78, 307, 912, 1146, 1361, 1471
DpnI	GATC	7 cut(s)	36, 51, 61, 615, 893, 1287, 1404
DpnII	GATC	7 cut(s)	34, 49, 59, 613, 891, 1285, 1402
DraI	TTTAAA	1 cut(s)	1168
DrdI	GACNNNNNNGTC	1 cut(s)	913
DseDI	GACNNNNNNGTC	1 cut(s)	913
EaeI	YGGCCR	1 cut(s)	327
Eam1104I	CTCTTC	5 cut(s)	990, 1145, 1242, 1384, 1506
EarI	CTCTTC	5 cut(s)	990, 1145, 1242, 1384, 1506
Eco130I	CCWWGG	2 cut(s)	408, 1620
Eco147I	AGGCCT	1 cut(s)	312
Eco24I	GRGCYC	2 cut(s)	370, 390
Eco31I	GGTCTC	1 cut(s)	60
Eco47I	GGWCC	3 cut(s)	788, 1485, 1658
Eco57I	CTGAAG	6 cut(s)	30, 971, 1043, 1223, 1481, 1683
EcoNI	CCTNNNNNAGG	1 cut(s)	183
EcoO109I	RGGNCCY	1 cut(s)	1485
EcoRII	CCWGG	1 cut(s)	965
EcoT14I	CCWWGG	2 cut(s)	408, 1620
EcoT22I	ATGCAT	2 cut(s)	1267, 1498
EcoT38I	GRGCYC	2 cut(s)	370, 390
ErhI	CCWWGG	2 cut(s)	408, 1620
FaeI	CATG	6 cut(s)	527, 538, 935, 979, 1613, 1695
FalI	AAGNNNNNCTT	8 cut(s)	195, 227, 736, 768, 751, 783, 1454, 1486
FaqI	GGGAC	2 cut(s)	378, 1100
FatI	CATG	6 cut(s)	523, 534, 931, 975, 1609, 1691
FauI	CCCGC	3 cut(s)	265, 756, 1275
FauNDI	CATATG	2 cut(s)	856, 1188
FblI	GTMKAC	2 cut(s)	422, 1073
FokI	GGATG	6 cut(s)	162, 612, 914, 1274, 1529, 1625
FriOI	GRGCYC	2 cut(s)	370, 390
FspBI	CTAG	2 cut(s)	144, 1714
GlaI	GCGC	2 cut(s)	18, 195
GsuI	CTGGAG	2 cut(s)	84, 667
HaeII	RGCGCY	1 cut(s)	197
HaeIII	GGCC	5 cut(s)	299, 312, 329, 349, 368
HapII	CCGG	6 cut(s)	11, 183, 300, 396, 791, 829
HgaI	GACGC	3 cut(s)	8, 179, 548
HhaI	GCGC	2 cut(s)	19, 196
Hin1I	GRCGYC	1 cut(s)	540
Hin1II	CATG	6 cut(s)	527, 538, 935, 979, 1613, 1695
Hin6I	GCGC	2 cut(s)	17, 194
HinP1I	GCGC	2 cut(s)	17, 194
HincII	GTYRAC	1 cut(s)	1074
HindII	GTYRAC	1 cut(s)	1074
HindIII	AAGCTT	1 cut(s)	1170
HinfI	GANTC	7 cut(s)	240, 303, 651, 907, 914, 1294, 1682
HpaII	CCGG	6 cut(s)	11, 183, 300, 396, 791, 829
HphI	GGTGA	6 cut(s)	107, 266, 490, 872, 1067, 1211
Hpy166II	GTNNAC	4 cut(s)	423, 1074, 1160, 1457
Hpy188III	TCNNGA	7 cut(s)	23, 57, 63, 183, 646, 911, 989
Hpy8I	GTNNAC	4 cut(s)	423, 1074, 1160, 1457
Hpy99I	CGWCG	5 cut(s)	163, 173, 229, 384, 568
HpyAV	CCTTC	4 cut(s)	119, 189, 572, 1432
HpyCH4III	ACNGT	4 cut(s)	118, 320, 597, 1444
HpyCH4IV	ACGT	4 cut(s)	161, 382, 685, 1478
HpyF10VI	GCNNNNNNNGC	9 cut(s)	74, 269, 385, 665, 704, 953, 976, 1127, 1590
HpyF3I	CTNAG	6 cut(s)	78, 307, 912, 1146, 1361, 1471
HpySE526I	ACGT	4 cut(s)	161, 382, 685, 1478
Hsp92I	GRCGYC	1 cut(s)	540
Hsp92II	CATG	6 cut(s)	527, 538, 935, 979, 1613, 1695
HspAI	GCGC	2 cut(s)	17, 194
Kpn2I	TCCGGA	1 cut(s)	182
Kzo9I	GATC	7 cut(s)	34, 49, 59, 613, 891, 1285, 1402
LguI	GCTCTTC	1 cut(s)	1384
LmnI	GCTCC	2 cut(s)	65, 673
Lsp1109I	GCAGC	9 cut(s)	258, 478, 547, 558, 668, 859, 1117, 1549, 1596
LweI	GCATC	5 cut(s)	144, 1092, 1252, 1636, 1647
MaeI	CTAG	2 cut(s)	144, 1714
MaeII	ACGT	4 cut(s)	161, 382, 685, 1478
MaeIII	GTNAC	5 cut(s)	320, 496, 688, 775, 1314
MalI	GATC	7 cut(s)	36, 51, 61, 615, 893, 1287, 1404
MbiI	CCGCTC	2 cut(s)	84, 1282
MboI	GATC	7 cut(s)	34, 49, 59, 613, 891, 1285, 1402
MfeI	CAATTG	1 cut(s)	735
MflI	RGATCY	2 cut(s)	34, 1285
MhlI	GDGCHC	2 cut(s)	370, 390
MlsI	TGGCCA	1 cut(s)	329
MluCI	AATT	9 cut(s)	279, 488, 504, 604, 708, 735, 1058, 1250, 1687
MluNI	TGGCCA	1 cut(s)	329
MlyI	GAGTC	4 cut(s)	297, 901, 923, 1691
Mox20I	TGGCCA	1 cut(s)	329
Mph1103I	ATGCAT	2 cut(s)	1267, 1498
MroI	TCCGGA	1 cut(s)	182
MscI	TGGCCA	1 cut(s)	329
MseI	TTAA	5 cut(s)	164, 603, 1167, 1274, 1671
Msp20I	TGGCCA	1 cut(s)	329
MspA1I	CMGCKG	2 cut(s)	249, 272
MspCI	CTTAAG	1 cut(s)	1273
MspI	CCGG	6 cut(s)	11, 183, 300, 396, 791, 829
MspR9I	CCNGG	2 cut(s)	396, 967
MunI	CAATTG	1 cut(s)	735
Mva1269I	GAATGC	3 cut(s)	659, 947, 1523
MvaI	CCWGG	1 cut(s)	967
MvnI	CGCG	1 cut(s)	19
MwoI	GCNNNNNNNGC	9 cut(s)	74, 269, 385, 665, 704, 953, 976, 1127, 1590
NciI	CCSGG	1 cut(s)	396
NdeI	CATATG	2 cut(s)	856, 1188
NdeII	GATC	7 cut(s)	34, 49, 59, 613, 891, 1285, 1402
NlaIII	CATG	6 cut(s)	527, 538, 935, 979, 1613, 1695
NlaIV	GGNNCC	3 cut(s)	368, 521, 669
NmeAIII	GCCGAG	1 cut(s)	568
NmuCI	GTSAC	3 cut(s)	320, 496, 1314
NsiI	ATGCAT	2 cut(s)	1267, 1498
NspI	RCATGY	1 cut(s)	979
PceI	AGGCCT	1 cut(s)	312
PciSI	GCTCTTC	1 cut(s)	1384
PctI	GAATGC	3 cut(s)	659, 947, 1523
PfeI	GAWTC	3 cut(s)	240, 651, 1294
PfoI	TCCNGGA	1 cut(s)	394
Ple19I	CGATCG	1 cut(s)	1405
PleI	GAGTC	4 cut(s)	297, 901, 922, 1690
PpsI	GAGTC	4 cut(s)	297, 901, 922, 1690
PpuMI	RGGWCCY	1 cut(s)	1485
PsiI	TTATAA	1 cut(s)	1139
Psp5II	RGGWCCY	1 cut(s)	1485
Psp6I	CCWGG	1 cut(s)	965
PspGI	CCWGG	1 cut(s)	965
PspN4I	GGNNCC	3 cut(s)	368, 521, 669
PspOMI	GGGCCC	1 cut(s)	366
PspPI	GGNCC	7 cut(s)	297, 347, 366, 367, 788, 1485, 1658
PspPPI	RGGWCCY	1 cut(s)	1485
PsrI	GAACNNNNNNTAC	2 cut(s)	512, 544
PstI	CTGCAG	1 cut(s)	1595
PstNI	CAGNNNCTG	1 cut(s)	1590
PsuI	RGATCY	2 cut(s)	34, 1285
PvuI	CGATCG	1 cut(s)	1405
RsaI	GTAC	4 cut(s)	749, 1349, 1446, 1541
RsaNI	GTAC	4 cut(s)	748, 1348, 1445, 1540
Rsr2I	CGGWCCG	1 cut(s)	788
RsrII	CGGWCCG	1 cut(s)	788
SalI	GTCGAC	1 cut(s)	1072
SapI	GCTCTTC	1 cut(s)	1384
SaqAI	TTAA	5 cut(s)	164, 603, 1167, 1274, 1671
Sau3AI	GATC	7 cut(s)	34, 49, 59, 613, 891, 1285, 1402
Sau96I	GGNCC	7 cut(s)	297, 347, 366, 367, 788, 1485, 1658
ScaI	AGTACT	1 cut(s)	1349
SchI	GAGTC	4 cut(s)	297, 901, 923, 1691
ScrFI	CCNGG	2 cut(s)	396, 967
SduI	GDGCHC	2 cut(s)	370, 390
SfaNI	GCATC	5 cut(s)	144, 1092, 1252, 1636, 1647
SfcI	CTRYAG	3 cut(s)	693, 1591, 1662
SinI	GGWCC	3 cut(s)	788, 1485, 1658
SmlI	CTYRAG	2 cut(s)	23, 1273
SmoI	CTYRAG	2 cut(s)	23, 1273
Sse9I	AATT	9 cut(s)	279, 488, 504, 604, 708, 735, 1058, 1250, 1687
SseBI	AGGCCT	1 cut(s)	312
SspI	AATATT	1 cut(s)	1413
SspMI	CTAG	2 cut(s)	144, 1714
StuI	AGGCCT	1 cut(s)	312
StyD4I	CCNGG	2 cut(s)	394, 965
StyI	CCWWGG	2 cut(s)	408, 1620
TaaI	ACNGT	4 cut(s)	118, 320, 597, 1444
TaiI	ACGT	4 cut(s)	164, 385, 688, 1481
TaqI	TCGA	7 cut(s)	58, 576, 917, 1073, 1248, 1405, 1428
TaqII	GACCGA	2 cut(s)	42, 1646
TasI	AATT	9 cut(s)	279, 488, 504, 604, 708, 735, 1058, 1250, 1687
TatI	WGTACW	1 cut(s)	1347
TauI	GCSGC	3 cut(s)	17, 194, 266
TfiI	GAWTC	3 cut(s)	240, 651, 1294
Tru1I	TTAA	5 cut(s)	164, 603, 1167, 1274, 1671
Tru9I	TTAA	5 cut(s)	164, 603, 1167, 1274, 1671
TscAI	CASTG	3 cut(s)	481, 709, 1464
TseFI	GTSAC	3 cut(s)	320, 496, 1314
Tsp45I	GTSAC	3 cut(s)	320, 496, 1314
TspDTI	ATGAA	3 cut(s)	1205, 1414, 1680
TspGWI	ACGGA	2 cut(s)	801, 1565
TspRI	CASTG	3 cut(s)	481, 709, 1464
Vha464I	CTTAAG	1 cut(s)	1273
VpaK11BI	GGWCC	3 cut(s)	788, 1485, 1658
XagI	CCTNNNNNAGG	1 cut(s)	183
XapI	RAATTY	4 cut(s)	488, 1058, 1250, 1687
XceI	RCATGY	1 cut(s)	979
XmiI	GTMKAC	2 cut(s)	422, 1073
XspI	CTAG	2 cut(s)	144, 1714
ZrmI	AGTACT	1 cut(s)	1349
Zsp2I	ATGCAT	2 cut(s)	1267, 1498

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.