AT1G06840
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005593
Physical Location & Seq
Reverse (-)
2097747 .. 2103507
5761 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G06840.1

Sequence Viewer

Length: 2862 bp
ATGTTTTCGACCCATCATGTCTCTCGTCTCCTCATACCTCTGCTCTTCTTCTTCCTCTTCTGTTGCTTTTCTTCTACTTTTGCTCAAGACGACATCACCAATCCCGTTGAAGTGAGGGCTTTGCGAGTGATCAAAGAAAGTTTGAACGATCCTGTTCATAGATTGAGAAATTGGAAGCATGGAGACCCGTGCAATTCGAATTGGACTGGTGTTGTCTGCTTCAACTCCACTCTTGATGATGGTTATCTTCATGTCAGCGAATTGCAATTGTTCAGTATGAATCTCTCAGGGAACTTGTCTCCGGAGCTTGGCCGGTTGTCTCGTCTTACTATCCTGAGTTTCATGTGGAATAAGATCACCGGAAGTATACCAAAGGAAATTGGGAATATCAAGTCCTTAGAACTCTTGCTCCTGAATGGAAATCTGTTAAATGGAAACTTACCAGAGGAGCTAGGGTTTCTTCCAAACTTGGACAGAATACAGATTGATGAAAACCGTATATCAGGACCACTTCCCAAATCTTTTGCAAACTTAAACAAAACGAAGCACTTTCACATGAACAATAATTCTATTAGCGGGCAGATACCACCAGAGCTTGGAAGCCTACCATCCATTGTTCACATCCTTCTTGATAACAACAATTTATCAGGCTATCTTCCCCCTGAGTTATCAAACATGCCGCGTTTACTTATCCTACAATTAGATAACAATCACTTTGACGGGACTACGATTCCACAATCTTATGGAAACATGTCTAAACTTTTGAAGATGAGTCTTAGGAACTGCAGCTTGCAAGGGCCAGTGCCTGATCTTAGCAGCATACCGAACCTTGGTTATTTGGACCTAAGTCAAAATCAGTTAAATGGATCTATACCTGCAGGGAAGCTTTCTGATAGTATCACAACCATCGATCTATCCAATAACAGTCTAACTGGAACCATTCCAACAAATTTCTCAGGCCTTCCACGGCTTCAAAAGCTGTCGCTTGCAAACAATGCTCTGAGTGGTTCCATTCCCTCTAGAATATGGCAGGAAAGAGAGCTGAATTCAACCGAGAGTATTATCGTGGATCTGCGGAACAATGGGTTTTCAAATATCTCTGGCAGATCCGATCTCCGTCCAAATGTGACCGTCTGGCTTCAGGGGAATCCGTTGTGCTCAGATGGAAATCTGCTTCGATTGTGTGGACCTATAACTGAGGAAGACATTAATCAGGGTTCAACCAATTCTAATACTACAATTTGTTCTGACTGCCCACCCCCTTATGAATTTTCACCAGAACCTCTTAGACGTTGCTTTTGTGCTGCTCCTCTGCTTGTTGGATATCGGTTGAAAAGTCCTGGTTTCTCGGACTTTGTTCCTTACAGATCCGAATTTGAGCAATATATCACCTCTGGTCTTAGTTTGAATCTGTATCAGCTACGCCTTGACTCATTCCAGTGGCAGAAAGGACCTAGACTTCGAATGTATTTGAAGTTCTTTCCTGTTTTTGGTTCAAATGCCAACAATTCTTTCATATTCAATCGTAGCGAGGTTCGGCGAATAAGGGGCATGTTCACTGGATGGAATATCCGAGACGAAGATCTCTTTGGTCCTTATGAGCTTATGAATTTCACATTGTTAGATGTCTACAGAGATGTGTTTCCTTCAGCTTCGCCATCTGGTCTAAGTAATGGTGCAGTTGCGGGAATAGTTCTTGGTTCTGTTGCAGCTGCAGTAACGCTAACTGCTATCATTGCCCTTATCATTATGAGAAAACGTATGAGAGGATACAGTGCAGTTGCTAGAAGAAAGCGATCTTCCAAAGCTTCTTTGAAAATCGAAGGTGTGAAGAGCTTCACTTATGCTGAGTTGGCTCTGGCTACAGACAATTTTAATAGTTCCACTCAAATTGGGCAAGGGGGTTATGGAAAGGTATACAAAGGTACACTTGGGAGTGGAACGGTTGTGGCAATTAAAAGAGCACAAGAGGGATCATTGCAGGGTGAGAAGGAGTTCCTAACTGAAATTGAATTGTTATCGAGATTGCATCACAGAAACCTTGTTTCGTTGCTTGGATTCTGTGATGAAGAAGGCGAACAGATGCTGGTTTATGAGTACATGGAAAATGGTACTTTGCGAGACAACATTTCTGTTAAATTAAAAGAGCCTCTAGACTTTGCGATGAGACTACGGATTGCTTTAGGTTCAGCCAAGGGAATCTTGTATTTACACACGGAAGCTAATCCCCCGATATTTCATCGCGATATCAAAGCAAGCAACATATTGTTGGACTCCAGATTCACCGCAAAGGTTGCAGATTTTGGACTCTCAAGACTTGCCCCAGTACCTGATATGGAAGGCATCTCACCTCAGCACGTGTCTACTGTTGTAAAAGGGACTCCTGGTTACCTTGACCCGGAATATTTCTTGACTCATCAATTGACGGACAAAAGTGATGTATATAGTCTAGGCGTAGTGTTGTTAGAGCTCTTTACTGGAATGCAGCCAATCACACATGGCAAGAACATTGTGCGAGAGATCAACATTGCCTACGAGTCTGGTTCGATATTATCAACCGTGGATAAGAGAATGAGCTCAGTTCCAGACGAATGCCTCGAAAAGTTTGCAACTTTAGCGCTGCGATGCTGCAGAGAGGAGACAGATGCGAGGCCTTCAATGGCAGAAGTTGTAAGAGAACTAGAAATCATATGGGAACTGATGCCGGAATCTCATGTAGCCAAGACAGCGGATCTCTCTGAGACAATGACTCATCCATCATCGTCATCGAATTCTTCAATCATGAAGCATCATTATACATCGATGGATGTCTCCGGCTCTGACCTCGTCAGTGGAGTTGCTCCCTCAGTTGCACCTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

953

Amino Acids

105.62

Weight (kDa)

6.4

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 73 3.4e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 155 - 215 2e-06 Leucine rich repeat
LRR_8 PF13855 300 - 336 2.2e-06 Leucine rich repeat
Pkinase PF00069 626 - 892 3.3e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 628 - 894 3.5e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 883
AccB7I CCANNNNNTGG 1 cut(s) 596
AccI GTMKAC 4 cut(s) 367, 1629, 1917, 2363
AccII CGCG 2 cut(s) 682, 2244
AccIII TCCGGA 1 cut(s) 301
AciI CCGC 6 cut(s) 576, 680, 1075, 1685, 2286, 2729
AclWI GGATC 7 cut(s) 143, 874, 1077, 1101, 1362, 1981, 2739
AcoI YGGCCR 1 cut(s) 310
AcsI RAATTY 6 cut(s) 949, 1045, 1268, 1373, 1609, 2770
AcuI CTGAAG 2 cut(s) 1124, 1632
AcvI CACGTG 1 cut(s) 2359
AfaI GTAC 4 cut(s) 1927, 2099, 2113, 2328
AfeI AGCGCT 1 cut(s) 2619
AfiI CCNNNNNNNGG 5 cut(s) 308, 596, 830, 1490, 2398
AflIII ACRYGT 2 cut(s) 750, 2358
AjnI CCWGG 2 cut(s) 1339, 2383
AjuI GAANNNNNNNTTGG 4 cut(s) 1496, 1528, 1572, 1604
AloI GAACNNNNNNTCC 2 cut(s) 393, 425
Alw21I GWGCWC 4 cut(s) 1160, 1966, 2472, 2579
AlwI GGATC 7 cut(s) 143, 874, 1077, 1101, 1362, 1981, 2739
AlwNI CAGNNNCTG 3 cut(s) 806, 2086, 2330
Aor13HI TCCGGA 1 cut(s) 301
Aor51HI AGCGCT 1 cut(s) 2619
AoxI GGCC 4 cut(s) 310, 797, 958, 2651
ApeKI GCWGC 8 cut(s) 786, 816, 1304, 1709, 1712, 2485, 2620, 2628
ApoI RAATTY 6 cut(s) 949, 1045, 1268, 1373, 1609, 2770
ArsI GACNNNNNNTTYG 4 cut(s) 1281, 1313, 1443, 1475
AseI ATTAAT 1 cut(s) 1209
Asp700I GAANNNNTTC 2 cut(s) 1835, 1994
AspLEI GCGC 1 cut(s) 2620
AspS9I GGNCC 6 cut(s) 506, 797, 841, 1187, 1451, 1592
AsuC2I CCSGG 1 cut(s) 2399
AsuHPI GGTGA 7 cut(s) 88, 349, 1266, 1381, 1997, 2275, 2340
AsuII TTCGAA 2 cut(s) 197, 1462
AvaII GGWCC 5 cut(s) 506, 841, 1187, 1451, 1592
BanII GRGCYC 2 cut(s) 2472, 2579
BbrPI CACGTG 1 cut(s) 2359
BbsI GAAGAC 1 cut(s) 1209
Bbv12I GWGCWC 4 cut(s) 1160, 1966, 2472, 2579
BbvCI CCTCAGC 1 cut(s) 2352
BbvI GCAGC 8 cut(s) 798, 828, 1291, 1699, 1721, 2497, 2607, 2615
BccI CCATC 9 cut(s) 21, 233, 616, 914, 1157, 1557, 1666, 2764, 2797
BceAI ACGGC 1 cut(s) 983
BcgI CGANNNNNNTGC 2 cut(s) 2588, 2622
BciT130I CCWGG 2 cut(s) 1341, 2385
BciVI GTATCC 1 cut(s) 1763
BclI TGATCA 1 cut(s) 129
BcnI CCSGG 1 cut(s) 2399
BfaI CTAG 8 cut(s) 452, 1020, 1455, 1785, 2153, 2450, 2681, 2856
BfmI CTRYAG 6 cut(s) 784, 876, 1630, 1713, 1863, 2629
BfoI RGCGCY 1 cut(s) 2621
BfuAI ACCTGC 1 cut(s) 883
BfuI GTATCC 1 cut(s) 1763
BglII AGATCT 1 cut(s) 1582
BisI GCNGC 9 cut(s) 680, 787, 817, 1305, 1710, 1713, 2486, 2621, 2629
BlsI GCNGC 9 cut(s) 681, 788, 818, 1306, 1711, 1714, 2487, 2622, 2630
Bme1390I CCNGG 3 cut(s) 1341, 2385, 2399
Bme18I GGWCC 5 cut(s) 506, 841, 1187, 1451, 1592
BmgT120I GGNCC 6 cut(s) 506, 797, 841, 1187, 1451, 1592
BmiI GGNNCC 2 cut(s) 937, 1009
BmrFI CCNGG 3 cut(s) 1341, 2385, 2399
BmrI ACTGGG 1 cut(s) 2318
BmsI GCATC 7 cut(s) 2038, 2073, 2352, 2615, 2635, 2691, 2797
BmuI ACTGGG 1 cut(s) 2318
BoxI GACNNNNGTC 1 cut(s) 846
BpiI GAAGAC 1 cut(s) 1209
BpmI CTGGAG 1 cut(s) 2260
Bpu10I CCTNAGC 1 cut(s) 2352
Bpu14I TTCGAA 2 cut(s) 197, 1462
BpuEI CTTGAG 2 cut(s) 69, 2296
BpuMI CCSGG 1 cut(s) 2399
Bsa29I ATCGAT 2 cut(s) 909, 2801
BsaAI YACGTR 1 cut(s) 2359
BsaBI GATNNNNATC 3 cut(s) 243, 708, 1167
BsaI GGTCTC 1 cut(s) 177
BsaJI CCNNGG 4 cut(s) 829, 965, 2193, 2559
BsaWI WCCGGW 2 cut(s) 301, 359
BsaXI ACNNNNNCTCC 4 cut(s) 393, 423, 440, 470
Bsc4I CCNNNNNNNGG 5 cut(s) 308, 596, 830, 1490, 2398
Bse118I RCCGGY 1 cut(s) 312
Bse1I ACTGG 7 cut(s) 211, 800, 937, 1438, 1564, 2324, 2482
Bse3DI GCAATG 3 cut(s) 1734, 1976, 2526
Bse8I GATNNNNATC 3 cut(s) 243, 708, 1167
BseAI TCCGGA 1 cut(s) 301
BseBI CCWGG 2 cut(s) 1341, 2385
BseCI ATCGAT 2 cut(s) 909, 2801
BseDI CCNNGG 4 cut(s) 829, 965, 2193, 2559
BseGI GGATG 5 cut(s) 608, 621, 1568, 2752, 2812
BseJI GATNNNNATC 3 cut(s) 243, 708, 1167
BseLI CCNNNNNNNGG 5 cut(s) 308, 596, 830, 1490, 2398
BseMI GCAATG 3 cut(s) 1734, 1976, 2526
BseNI ACTGG 7 cut(s) 211, 800, 937, 1438, 1564, 2324, 2482
BseRI GAGGAG 4 cut(s) 20, 461, 1299, 2651
BseXI GCAGC 8 cut(s) 798, 828, 1291, 1699, 1721, 2497, 2607, 2615
BsgI GTGCAG 2 cut(s) 1698, 1797
Bsh1236I CGCG 2 cut(s) 682, 2244
BshFI GGCC 4 cut(s) 312, 799, 960, 2653
BshVI ATCGAT 2 cut(s) 909, 2801
BsiHKAI GWGCWC 4 cut(s) 1160, 1966, 2472, 2579
BsiSI CCGG 6 cut(s) 302, 313, 360, 2399, 2705, 2814
BslFI GGGAC 2 cut(s) 736, 2392
BslI CCNNNNNNNGG 5 cut(s) 308, 596, 830, 1490, 2398
BsmBI CGTCTC 2 cut(s) 32, 1569
BsmFI GGGAC 2 cut(s) 736, 2392
BsmI GAATGC 2 cut(s) 2487, 2597
BsnI GGCC 4 cut(s) 312, 799, 960, 2653
Bso31I GGTCTC 1 cut(s) 177
Bsp119I TTCGAA 2 cut(s) 197, 1462
Bsp1286I GDGCHC 4 cut(s) 1160, 1966, 2472, 2579
Bsp13I TCCGGA 1 cut(s) 301
Bsp68I TCGCGA 1 cut(s) 2244
BspACI CCGC 6 cut(s) 576, 680, 1075, 1685, 2286, 2729
BspANI GGCC 4 cut(s) 312, 799, 960, 2653
BspDI ATCGAT 2 cut(s) 909, 2801
BspEI TCCGGA 1 cut(s) 301
BspFNI CGCG 2 cut(s) 682, 2244
BspHI TCATGA 1 cut(s) 2781
BspLI GGNNCC 2 cut(s) 937, 1009
BspMAI CTGCAG 4 cut(s) 788, 880, 1717, 2633
BspMI ACCTGC 1 cut(s) 883
BspPI GGATC 7 cut(s) 143, 874, 1077, 1101, 1362, 1981, 2739
BspQI GCTCTTC 2 cut(s) 50, 1826
BspT104I TTCGAA 2 cut(s) 197, 1462
BspTNI GGTCTC 1 cut(s) 177
BsrDI GCAATG 3 cut(s) 1734, 1976, 2526
BsrFI RCCGGY 1 cut(s) 312
BsrI ACTGG 7 cut(s) 211, 800, 937, 1438, 1564, 2324, 2482
BssAI RCCGGY 1 cut(s) 312
BssECI CCNNGG 4 cut(s) 829, 965, 2193, 2559
BssNAI GTATAC 2 cut(s) 368, 1918
BssT1I CCWWGG 2 cut(s) 829, 2193
Bst1107I GTATAC 2 cut(s) 368, 1918
Bst2UI CCWGG 2 cut(s) 1341, 2385
Bst4CI ACNGT 7 cut(s) 497, 926, 1132, 1775, 1945, 2368, 2560
Bst6I CTCTTC 3 cut(s) 50, 62, 1826
BstAPI GCANNNNNTGC 2 cut(s) 995, 2294
BstBAI YACGTR 1 cut(s) 2359
BstBI TTCGAA 2 cut(s) 197, 1462
BstC8I GCNNGC 4 cut(s) 578, 791, 987, 2257
BstDSI CCRYGG 2 cut(s) 965, 2559
BstEII GGTNACC 1 cut(s) 2387
BstF5I GGATG 5 cut(s) 608, 621, 1568, 2752, 2812
BstFNI CGCG 2 cut(s) 682, 2244
BstH2I RGCGCY 1 cut(s) 2621
BstHHI GCGC 1 cut(s) 2620
BstMWI GCNNNNNNNGC 7 cut(s) 976, 995, 1736, 1853, 2294, 2615, 2726
BstNI CCWGG 2 cut(s) 1341, 2385
BstNSI RCATGY 3 cut(s) 679, 754, 1555
BstPAI GACNNNNGTC 1 cut(s) 846
BstPI GGTNACC 1 cut(s) 2387
BstSCI CCNGG 3 cut(s) 1339, 2383, 2397
BstSFI CTRYAG 6 cut(s) 784, 876, 1630, 1713, 1863, 2629
BstUI CGCG 2 cut(s) 682, 2244
BstV1I GCAGC 8 cut(s) 798, 828, 1291, 1699, 1721, 2497, 2607, 2615
BstV2I GAAGAC 1 cut(s) 1209
BstX2I RGATCY 6 cut(s) 866, 1069, 1106, 1367, 1582, 2731
BstYI RGATCY 6 cut(s) 866, 1069, 1106, 1367, 1582, 2731
BstZ17I GTATAC 2 cut(s) 368, 1918
Bsu15I ATCGAT 2 cut(s) 909, 2801
BsuI GTATCC 1 cut(s) 1763
BsuRI GGCC 4 cut(s) 312, 799, 960, 2653
BsuTUI ATCGAT 2 cut(s) 909, 2801
BtgI CCRYGG 2 cut(s) 965, 2559
BtgZI GCGATG 3 cut(s) 2177, 2225, 2638
BtsCI GGATG 5 cut(s) 608, 621, 1568, 2752, 2812
BtsIMutI CAGTG 5 cut(s) 807, 1445, 1557, 1780, 2836
BtuMI TCGCGA 1 cut(s) 2244
BveI ACCTGC 1 cut(s) 883
Cac8I GCNNGC 4 cut(s) 578, 791, 987, 2257
CaiI CAGNNNCTG 3 cut(s) 806, 2086, 2330
CciI TCATGA 1 cut(s) 2781
CfoI GCGC 1 cut(s) 2620
Cfr10I RCCGGY 1 cut(s) 312
Cfr13I GGNCC 6 cut(s) 506, 797, 841, 1187, 1451, 1592
ClaI ATCGAT 2 cut(s) 909, 2801
Csp6I GTAC 4 cut(s) 1926, 2098, 2112, 2327
CspCI CAANNNNNGTGG 2 cut(s) 1873, 1908
CviQI GTAC 4 cut(s) 1926, 2098, 2112, 2327
EaeI YGGCCR 1 cut(s) 310
Eam1104I CTCTTC 3 cut(s) 50, 62, 1826
EarI CTCTTC 3 cut(s) 50, 62, 1826
Ecl136II GAGCTC 2 cut(s) 2470, 2577
Eco130I CCWWGG 2 cut(s) 829, 2193
Eco147I AGGCCT 2 cut(s) 960, 2653
Eco24I GRGCYC 2 cut(s) 2472, 2579
Eco31I GGTCTC 1 cut(s) 177
Eco32I GATATC 2 cut(s) 1325, 2248
Eco47I GGWCC 5 cut(s) 506, 841, 1187, 1451, 1592
Eco47III AGCGCT 1 cut(s) 2619
Eco53kI GAGCTC 2 cut(s) 2470, 2577
Eco57I CTGAAG 2 cut(s) 1124, 1632
Eco72I CACGTG 1 cut(s) 2359
Eco91I GGTNACC 1 cut(s) 2387
EcoICRI GAGCTC 2 cut(s) 2470, 2577
EcoO109I RGGNCCY 1 cut(s) 1451
EcoO65I GGTNACC 1 cut(s) 2387
EcoRI GAATTC 2 cut(s) 1045, 2770
EcoRII CCWGG 2 cut(s) 1339, 2383
EcoRV GATATC 2 cut(s) 1325, 2248
EcoT14I CCWWGG 2 cut(s) 829, 2193
EcoT38I GRGCYC 2 cut(s) 2472, 2579
ErhI CCWWGG 2 cut(s) 829, 2193
Esp3I CGTCTC 2 cut(s) 32, 1569
FalI AAGNNNNNCTT 4 cut(s) 1914, 1946, 2186, 2218
FaqI GGGAC 2 cut(s) 736, 2392
FauI CCCGC 2 cut(s) 569, 1678
FauNDI CATATG 1 cut(s) 2690
FbaI TGATCA 1 cut(s) 129
FblI GTMKAC 4 cut(s) 367, 1629, 1917, 2363
Fnu4HI GCNGC 9 cut(s) 680, 787, 817, 1305, 1710, 1713, 2486, 2621, 2629
FokI GGATG 5 cut(s) 595, 608, 1575, 2739, 2819
FriOI GRGCYC 2 cut(s) 2472, 2579
Fsp4HI GCNGC 9 cut(s) 680, 787, 817, 1305, 1710, 1713, 2486, 2621, 2629
FspBI CTAG 8 cut(s) 452, 1020, 1455, 1785, 2153, 2450, 2681, 2856
GlaI GCGC 1 cut(s) 2619
GluI GCNGC 9 cut(s) 680, 787, 817, 1305, 1710, 1713, 2486, 2621, 2629
GsuI CTGGAG 1 cut(s) 2260
HaeII RGCGCY 1 cut(s) 2621
HaeIII GGCC 4 cut(s) 312, 799, 960, 2653
HapII CCGG 6 cut(s) 302, 313, 360, 2399, 2705, 2814
HhaI GCGC 1 cut(s) 2620
Hin6I GCGC 1 cut(s) 2618
HinP1I GCGC 1 cut(s) 2618
HindIII AAGCTT 2 cut(s) 884, 1806
HpaII CCGG 6 cut(s) 302, 313, 360, 2399, 2705, 2814
HphI GGTGA 7 cut(s) 88, 349, 1266, 1381, 1997, 2275, 2340
Hpy166II GTNNAC 9 cut(s) 368, 619, 686, 1187, 1557, 1630, 1918, 1928, 2364
Hpy8I GTNNAC 9 cut(s) 368, 619, 686, 1187, 1557, 1630, 1918, 1928, 2364
HpyAV CCTTC 8 cut(s) 635, 971, 1656, 1817, 1984, 2066, 2333, 2664
HpyCH4III ACNGT 7 cut(s) 497, 926, 1132, 1775, 1945, 2368, 2560
HpyCH4IV ACGT 3 cut(s) 1291, 1759, 2358
HpyF10VI GCNNNNNNNGC 7 cut(s) 976, 995, 1736, 1853, 2294, 2615, 2726
HpySE526I ACGT 3 cut(s) 1291, 1759, 2358
HspAI GCGC 1 cut(s) 2618
Kpn2I TCCGGA 1 cut(s) 301
Ksp22I TGATCA 1 cut(s) 129
LguI GCTCTTC 2 cut(s) 50, 1826
LmnI GCTCC 5 cut(s) 304, 414, 448, 1312, 2845
Lsp1109I GCAGC 8 cut(s) 798, 828, 1291, 1699, 1721, 2497, 2607, 2615
LweI GCATC 7 cut(s) 2038, 2073, 2352, 2615, 2635, 2691, 2797
MaeI CTAG 8 cut(s) 452, 1020, 1455, 1785, 2153, 2450, 2681, 2856
MaeII ACGT 3 cut(s) 1291, 1759, 2358
MaeIII GTNAC 3 cut(s) 1126, 1717, 2387
MfeI CAATTG 2 cut(s) 266, 2420
MflI RGATCY 6 cut(s) 866, 1069, 1106, 1367, 1582, 2731
MhlI GDGCHC 4 cut(s) 1160, 1966, 2472, 2579
MlyI GAGTC 8 cut(s) 781, 1424, 2267, 2301, 2374, 2407, 2546, 2743
MmeI TCCRAC 3 cut(s) 968, 1300, 2250
MroI TCCGGA 1 cut(s) 301
MroXI GAANNNNTTC 2 cut(s) 1835, 1994
MseI TTAA 8 cut(s) 428, 533, 860, 1209, 1875, 1956, 2136, 2141
MslI CAYNNNNRTG 1 cut(s) 1438
MspA1I CMGCKG 2 cut(s) 1712, 2729
MspI CCGG 6 cut(s) 302, 313, 360, 2399, 2705, 2814
MspR9I CCNGG 3 cut(s) 1341, 2385, 2399
MunI CAATTG 2 cut(s) 266, 2420
Mva1269I GAATGC 2 cut(s) 2487, 2597
MvaI CCWGG 2 cut(s) 1341, 2385
MvnI CGCG 2 cut(s) 682, 2244
MwoI GCNNNNNNNGC 7 cut(s) 976, 995, 1736, 1853, 2294, 2615, 2726
NciI CCSGG 1 cut(s) 2399
NdeI CATATG 1 cut(s) 2690
NlaIV GGNNCC 2 cut(s) 937, 1009
NmuCI GTSAC 1 cut(s) 1126
NruI TCGCGA 1 cut(s) 2244
NspI RCATGY 3 cut(s) 679, 754, 1555
NspV TTCGAA 2 cut(s) 197, 1462
PagI TCATGA 1 cut(s) 2781
PceI AGGCCT 2 cut(s) 960, 2653
PciI ACATGT 1 cut(s) 750
PciSI GCTCTTC 2 cut(s) 50, 1826
PcsI WCGNNNNNNNCGW 1 cut(s) 2595
PctI GAATGC 2 cut(s) 2487, 2597
PdmI GAANNNNTTC 2 cut(s) 1835, 1994
PfeI GAWTC 8 cut(s) 280, 730, 1147, 1408, 2058, 2199, 2280, 2708
PflFI GACNNNGTC 1 cut(s) 2825
PflMI CCANNNNNTGG 1 cut(s) 596
PkrI GCNGC 9 cut(s) 681, 788, 818, 1306, 1711, 1714, 2487, 2622, 2630
PleI GAGTC 8 cut(s) 780, 1424, 2267, 2301, 2374, 2407, 2545, 2743
PmaCI CACGTG 1 cut(s) 2359
PmlI CACGTG 1 cut(s) 2359
PpsI GAGTC 8 cut(s) 780, 1424, 2267, 2301, 2374, 2407, 2545, 2743
Ppu21I YACGTR 1 cut(s) 2359
PpuMI RGGWCCY 1 cut(s) 1451
PscI ACATGT 1 cut(s) 750
PshAI GACNNNNGTC 1 cut(s) 846
PshBI ATTAAT 1 cut(s) 1209
Psp124BI GAGCTC 2 cut(s) 2472, 2579
Psp5II RGGWCCY 1 cut(s) 1451
Psp6I CCWGG 2 cut(s) 1339, 2383
PspCI CACGTG 1 cut(s) 2359
PspEI GGTNACC 1 cut(s) 2387
PspGI CCWGG 2 cut(s) 1339, 2383
PspN4I GGNNCC 2 cut(s) 937, 1009
PspPI GGNCC 6 cut(s) 506, 797, 841, 1187, 1451, 1592
PspPPI RGGWCCY 1 cut(s) 1451
PsrI GAACNNNNNNTAC 2 cut(s) 1460, 1492
PstI CTGCAG 4 cut(s) 788, 880, 1717, 2633
PstNI CAGNNNCTG 3 cut(s) 806, 2086, 2330
PsuI RGATCY 6 cut(s) 866, 1069, 1106, 1367, 1582, 2731
PsyI GACNNNGTC 1 cut(s) 2825
PvuII CAGCTG 1 cut(s) 1712
RruI TCGCGA 1 cut(s) 2244
RsaI GTAC 4 cut(s) 1927, 2099, 2113, 2328
RsaNI GTAC 4 cut(s) 1926, 2098, 2112, 2327
RseI CAYNNNNRTG 1 cut(s) 1438
SacI GAGCTC 2 cut(s) 2472, 2579
SapI GCTCTTC 2 cut(s) 50, 1826
SaqAI TTAA 8 cut(s) 428, 533, 860, 1209, 1875, 1956, 2136, 2141
SatI GCNGC 9 cut(s) 680, 787, 817, 1305, 1710, 1713, 2486, 2621, 2629
Sau96I GGNCC 6 cut(s) 506, 797, 841, 1187, 1451, 1592
SbfI CCTGCAGG 1 cut(s) 880
SchI GAGTC 8 cut(s) 781, 1424, 2267, 2301, 2374, 2407, 2546, 2743
ScrFI CCNGG 3 cut(s) 1341, 2385, 2399
SdaI CCTGCAGG 1 cut(s) 880
SduI GDGCHC 4 cut(s) 1160, 1966, 2472, 2579
SfaNI GCATC 7 cut(s) 2038, 2073, 2352, 2615, 2635, 2691, 2797
SfcI CTRYAG 6 cut(s) 784, 876, 1630, 1713, 1863, 2629
SfuI TTCGAA 2 cut(s) 197, 1462
SinI GGWCC 5 cut(s) 506, 841, 1187, 1451, 1592
SmiMI CAYNNNNRTG 1 cut(s) 1438
SmlI CTYRAG 2 cut(s) 84, 2311
SmoI CTYRAG 2 cut(s) 84, 2311
Sse8387I CCTGCAGG 1 cut(s) 880
SseBI AGGCCT 2 cut(s) 960, 2653
SsiI CCGC 6 cut(s) 576, 680, 1075, 1685, 2286, 2729
SspI AATATT 1 cut(s) 2405
SspMI CTAG 8 cut(s) 452, 1020, 1455, 1785, 2153, 2450, 2681, 2856
SstI GAGCTC 2 cut(s) 2472, 2579
StuI AGGCCT 2 cut(s) 960, 2653
StyD4I CCNGG 3 cut(s) 1339, 2383, 2397
StyI CCWWGG 2 cut(s) 829, 2193
TaaI ACNGT 7 cut(s) 497, 926, 1132, 1775, 1945, 2368, 2560
TaiI ACGT 3 cut(s) 1294, 1762, 2361
TatI WGTACW 1 cut(s) 2097
TauI GCSGC 1 cut(s) 682
TfiI GAWTC 8 cut(s) 280, 730, 1147, 1408, 2058, 2199, 2280, 2708
Tru1I TTAA 8 cut(s) 428, 533, 860, 1209, 1875, 1956, 2136, 2141
Tru9I TTAA 8 cut(s) 428, 533, 860, 1209, 1875, 1956, 2136, 2141
TscAI CASTG 5 cut(s) 807, 1445, 1564, 1780, 2836
TseFI GTSAC 1 cut(s) 1126
TseI GCWGC 8 cut(s) 786, 816, 1304, 1709, 1712, 2485, 2620, 2628
Tsp45I GTSAC 1 cut(s) 1126
TspGWI ACGGA 5 cut(s) 1106, 1140, 2188, 2231, 2441
TspRI CASTG 5 cut(s) 807, 1445, 1564, 1780, 2836
Tth111I GACNNNGTC 1 cut(s) 2825
Van91I CCANNNNNTGG 1 cut(s) 596
VpaK11BI GGWCC 5 cut(s) 506, 841, 1187, 1451, 1592
VspI ATTAAT 1 cut(s) 1209
XapI RAATTY 6 cut(s) 949, 1045, 1268, 1373, 1609, 2770
XbaI TCTAGA 2 cut(s) 1019, 2152
XceI RCATGY 3 cut(s) 679, 754, 1555
XmiI GTMKAC 4 cut(s) 367, 1629, 1917, 2363
XmnI GAANNNNTTC 2 cut(s) 1835, 1994
XspI CTAG 8 cut(s) 452, 1020, 1455, 1785, 2153, 2450, 2681, 2856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.