AT1G07880

mitogen-activated protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004899
Physical Location & Seq
Reverse (-)
2433896 .. 2435858
1963 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G07880.1

Sequence Viewer

Length: 765 bp
ATGGAGAAAAGGGAAGATGGAGGGATCTTGACATATGATGGTAGATATGTTATGTACAATGTACTCGGTAACATTTTCGAGCTATCTTCAAAATACATCCCTCCTATTGAACCCATCGGCCGAGGTGCTTATGGTATTGTCTGCTGTGCTACAAACTCAGAGACAAATGAAGAGGTTGCTATAAAGAAGATAGCAAACGCGTTTGACAACAGAGTTGATGCTAAAAGAACTCTCCGAGAGATCAAGCTCCTTTCCCACATGGATCATGACAATGTTATCAAAATTAAAGATATAATTGAGCTACCAGAGAAAGAAAGGTTCGAAGATGTATATATTGTTTATGAGTTGATGGATACAGATTTGCACCAGATCATTAGATCCACTCAAACTCTAACTGATGACCATTGTCAGTACTTCCTTTACCAAATTTTGAGAGGCCTTAAGTACATACACTCTGCAAATGTTCTTCACCGCGATCTGAAACCGAGCAACTTGGTTCTGAATACGAACTGTGACCTGAAAATCTGTGATTTTGGGCTAGCAAGAACGTCGAATGAGACAGAGATAATGACTGAGTATGTTGTGACGAGATGGTACCGTGCACCTGAATTGCTTCTCAACAGCTCTGAATACACAGGAGCTATTGACATTTGGTCTGTTGGTTGCATTTTCATGGAGATACTTAGAAGAGAGACGCTTTTCCCTGGTAAAGATTACGTTCAGCAGCTGAAACTTATTACTGAGGTAAGCAAATTAAAACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022622 GO:0023014 GO:0023052 GO:0032501 GO:0032502 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
ko01521 ko01522 ko01524 ko04010 ko04011 ko04012 ko04013 ko04014 ko04015 ko04022 ko04024 ko04062 ko04066 ko04068 ko04071 ko04072 ko04114 ko04140 ko04150 ko04151 ko04210 ko04214 ko04218 ko04261 ko04270 ko04320 ko04350 ko04360 ko04370 ko04371 ko04380 ko04510 ko04520 ko04540 ko04550 ko04611 ko04620 ko04621 ko04650 ko04657 ko04658 ko04659 ko04660 ko04662 ko04664 ko04666 ko04668 ko04713 ko04720 ko04722 ko04723 ko04724 ko04725 ko04726 ko04730 ko04810 ko04910 ko04912 ko04914 ko04915 ko04916 ko04917 ko04919 ko04921 ko04926 ko04930 ko04933 ko04934 ko04960 ko05010 ko05020 ko05034 ko05131 ko05132 ko05133 ko05140 ko05142 ko05145 ko05152 ko05160 ko05161 ko05164 ko05165 ko05167 ko05200 ko05203 ko05205 ko05210 ko05211 ko05212 ko05213 ko05214 ko05215 ko05216 ko05218 ko05219 ko05220 ko05221 ko05223 ko05224 ko05225 ko05226 ko05230 ko05231 map01521 map01522 map01524 map04010 map04011 map04012 map04013 map04014 map04015 map04022 map04024 map04062 map04066 map04068 map04071 map04072 map04114 map04140 map04150 map04151 map04210 map04214 map04218 map04261 map04270 map04320 map04350 map04360 map04370 map04371 map04380 map04510 map04520 map04540 map04550 map04611 map04620 map04621 map04650 map04657 map04658 map04659 map04660 map04662 map04664 map04666 map04668 map04713 map04720 map04722 map04723 map04724 map04725 map04726 map04730 map04810 map04910 map04912 map04914 map04915 map04916 map04917 map04919 map04921 map04926 map04930 map04933 map04934 map04960 map05010 map05020 map05034 map05131 map05132 map05133 map05140 map05142 map05145 map05152 map05160 map05161 map05164 map05165 map05167 map05200 map05203 map05205 map05210 map05211 map05212 map05213 map05214 map05215 map05216 map05218 map05219 map05220 map05221 map05223 map05224 map05225 map05226 map05230 map05231
Pfam Domains
Protein Families
Pkinase

Protein Analysis

254

Amino Acids

29.45

Weight (kDa)

5.47

Isoelectric Point (pI)

33.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 37 - 242 1.3e-62 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 37 - 232 4.6e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 594
AccII CGCG 2 cut(s) 200, 474
AciI CCGC 1 cut(s) 472
AclWI GGATC 3 cut(s) 32, 270, 372
AcoI YGGCCR 1 cut(s) 118
AcsI RAATTY 1 cut(s) 426
AfaI GTAC 5 cut(s) 56, 63, 413, 446, 596
AflII CTTAAG 1 cut(s) 440
AflIII ACRYGT 1 cut(s) 198
AgsI TTSAA 2 cut(s) 90, 110
AhdI GACNNNNNGTC 1 cut(s) 652
AjnI CCWGG 1 cut(s) 703
AluBI AGCT 6 cut(s) 82, 247, 301, 624, 641, 727
AluI AGCT 6 cut(s) 82, 247, 301, 624, 641, 727
Alw21I GWGCWC 1 cut(s) 604
Alw26I GTCTC 3 cut(s) 155, 551, 686
Alw44I GTGCAC 1 cut(s) 600
AlwI GGATC 3 cut(s) 32, 270, 372
AlwNI CAGNNNCTG 1 cut(s) 727
AoxI GGCC 2 cut(s) 118, 436
ApaLI GTGCAC 1 cut(s) 600
ApeKI GCWGC 1 cut(s) 724
ApoI RAATTY 1 cut(s) 426
Asp700I GAANNNNTTC 1 cut(s) 612
Asp718I GGTACC 1 cut(s) 594
AsuHPI GGTGA 1 cut(s) 461
AsuII TTCGAA 1 cut(s) 321
AsuNHI GCTAGC 1 cut(s) 538
BaeGI GKGCMC 1 cut(s) 604
BanI GGYRCC 1 cut(s) 594
Bbv12I GWGCWC 1 cut(s) 604
BbvI GCAGC 1 cut(s) 736
BccI CCATC 5 cut(s) 11, 32, 122, 343, 585
BcgI CGANNNNNNTGC 2 cut(s) 531, 565
BciT130I CCWGG 1 cut(s) 705
BciVI GTATCC 1 cut(s) 346
BcoDI GTCTC 3 cut(s) 155, 551, 686
BfaI CTAG 1 cut(s) 539
BfrI CTTAAG 1 cut(s) 440
BfuI GTATCC 1 cut(s) 346
BisI GCNGC 1 cut(s) 725
BlsI GCNGC 1 cut(s) 726
BmcAI AGTACT 1 cut(s) 413
Bme1390I CCNGG 1 cut(s) 705
BmeRI GACNNNNNGTC 1 cut(s) 652
BmiI GGNNCC 1 cut(s) 596
BmrFI CCNGG 1 cut(s) 705
BmsI GCATC 1 cut(s) 208
BmtI GCTAGC 1 cut(s) 542
BoxI GACNNNNGTC 1 cut(s) 405
Bpu14I TTCGAA 1 cut(s) 321
BsaJI CCNNGG 2 cut(s) 121, 703
BseBI CCWGG 1 cut(s) 705
BseDI CCNNGG 2 cut(s) 121, 703
BseGI GGATG 1 cut(s) 96
BseMII CTCAG 3 cut(s) 171, 564, 732
BseSI GKGCMC 1 cut(s) 604
BseX3I CGGCCG 1 cut(s) 118
BseXI GCAGC 1 cut(s) 736
Bsh1236I CGCG 2 cut(s) 200, 474
Bsh1285I CGRYCG 1 cut(s) 121
BshFI GGCC 2 cut(s) 120, 438
BshNI GGYRCC 1 cut(s) 594
BsiEI CGRYCG 1 cut(s) 121
BsiHKAI GWGCWC 1 cut(s) 604
BsmAI GTCTC 3 cut(s) 155, 551, 686
BsmBI CGTCTC 1 cut(s) 686
BsnI GGCC 2 cut(s) 120, 438
Bsp119I TTCGAA 1 cut(s) 321
Bsp1286I GDGCHC 1 cut(s) 604
Bsp1407I TGTACA 1 cut(s) 54
Bsp143I GATC 6 cut(s) 24, 240, 262, 369, 377, 475
BspACI CCGC 1 cut(s) 472
BspANI GGCC 2 cut(s) 120, 438
BspCNI CTCAG 3 cut(s) 170, 565, 733
BspFNI CGCG 2 cut(s) 200, 474
BspHI TCATGA 1 cut(s) 265
BspLI GGNNCC 1 cut(s) 596
BspOI GCTAGC 1 cut(s) 542
BspPI GGATC 3 cut(s) 32, 270, 372
BspT104I TTCGAA 1 cut(s) 321
BspT107I GGYRCC 1 cut(s) 594
BspTI CTTAAG 1 cut(s) 440
BsrGI TGTACA 1 cut(s) 54
BssECI CCNNGG 2 cut(s) 121, 703
BssMI GATC 6 cut(s) 24, 240, 262, 369, 377, 475
Bst2UI CCWGG 1 cut(s) 705
Bst4CI ACNGT 2 cut(s) 512, 599
Bst6I CTCTTC 2 cut(s) 165, 682
BstAFI CTTAAG 1 cut(s) 440
BstAUI TGTACA 1 cut(s) 54
BstBI TTCGAA 1 cut(s) 321
BstC8I GCNNGC 1 cut(s) 540
BstDEI CTNAG 4 cut(s) 157, 573, 683, 741
BstF5I GGATG 1 cut(s) 96
BstFNI CGCG 2 cut(s) 200, 474
BstKTI GATC 6 cut(s) 27, 243, 265, 372, 380, 478
BstMAI GTCTC 3 cut(s) 155, 551, 686
BstMBI GATC 6 cut(s) 24, 240, 262, 369, 377, 475
BstMCI CGRYCG 1 cut(s) 121
BstNI CCWGG 1 cut(s) 705
BstPAI GACNNNNGTC 1 cut(s) 405
BstSCI CCNGG 1 cut(s) 703
BstSLI GKGCMC 1 cut(s) 604
BstUI CGCG 2 cut(s) 200, 474
BstV1I GCAGC 1 cut(s) 736
BstX2I RGATCY 2 cut(s) 24, 377
BstYI RGATCY 2 cut(s) 24, 377
BstZI CGGCCG 1 cut(s) 118
BsuI GTATCC 1 cut(s) 346
BsuRI GGCC 2 cut(s) 120, 438
BtsCI GGATG 1 cut(s) 96
Cac8I GCNNGC 1 cut(s) 540
CaiI CAGNNNCTG 1 cut(s) 727
CciI TCATGA 1 cut(s) 265
CseI GACGC 1 cut(s) 703
Csp6I GTAC 5 cut(s) 55, 62, 412, 445, 595
CviAII CATG 3 cut(s) 259, 266, 673
CviJI RGCY 9 cut(s) 82, 120, 247, 301, 438, 538, 624, 641, 727
CviKI_1 RGCY 9 cut(s) 82, 120, 247, 301, 438, 538, 624, 641, 727
CviQI GTAC 5 cut(s) 55, 62, 412, 445, 595
DdeI CTNAG 4 cut(s) 157, 573, 683, 741
DpnI GATC 6 cut(s) 26, 242, 264, 371, 379, 477
DpnII GATC 6 cut(s) 24, 240, 262, 369, 377, 475
DriI GACNNNNNGTC 1 cut(s) 652
EaeI YGGCCR 1 cut(s) 118
EagI CGGCCG 1 cut(s) 118
Eam1104I CTCTTC 2 cut(s) 165, 682
Eam1105I GACNNNNNGTC 1 cut(s) 652
EarI CTCTTC 2 cut(s) 165, 682
EclXI CGGCCG 1 cut(s) 118
Eco147I AGGCCT 1 cut(s) 438
Eco52I CGGCCG 1 cut(s) 118
EcoRII CCWGG 1 cut(s) 703
Esp3I CGTCTC 1 cut(s) 686
FaeI CATG 3 cut(s) 262, 269, 676
FatI CATG 3 cut(s) 258, 265, 672
FauNDI CATATG 1 cut(s) 34
Fnu4HI GCNGC 1 cut(s) 725
FokI GGATG 1 cut(s) 83
Fsp4HI GCNGC 1 cut(s) 725
FspBI CTAG 1 cut(s) 539
GluI GCNGC 1 cut(s) 725
HaeIII GGCC 2 cut(s) 120, 438
HgaI GACGC 1 cut(s) 703
Hin1II CATG 3 cut(s) 262, 269, 676
HphI GGTGA 1 cut(s) 461
Hpy166II GTNNAC 1 cut(s) 602
Hpy188I TCNGA 5 cut(s) 160, 236, 480, 501, 628
Hpy188III TCNNGA 2 cut(s) 28, 266
Hpy8I GTNNAC 1 cut(s) 602
Hpy99I CGWCG 1 cut(s) 553
HpyCH4III ACNGT 2 cut(s) 512, 599
HpyCH4IV ACGT 2 cut(s) 548, 717
HpyCH4V TGCA 4 cut(s) 364, 458, 602, 666
HpyF3I CTNAG 4 cut(s) 157, 573, 683, 741
HpySE526I ACGT 2 cut(s) 548, 717
Hsp92II CATG 3 cut(s) 262, 269, 676
KpnI GGTACC 1 cut(s) 598
Kzo9I GATC 6 cut(s) 24, 240, 262, 369, 377, 475
LmnI GCTCC 2 cut(s) 252, 638
LpnPI CCDG 7 cut(s) 318, 380, 530, 618, 621, 690, 717
Lsp1109I GCAGC 1 cut(s) 736
LweI GCATC 1 cut(s) 208
MaeI CTAG 1 cut(s) 539
MaeII ACGT 2 cut(s) 548, 717
MaeIII GTNAC 3 cut(s) 68, 512, 583
MalI GATC 6 cut(s) 26, 242, 264, 371, 379, 477
MboI GATC 6 cut(s) 24, 240, 262, 369, 377, 475
MboII GAAGA 7 cut(s) 26, 78, 182, 199, 335, 458, 699
MflI RGATCY 2 cut(s) 24, 377
MhlI GDGCHC 1 cut(s) 604
MluCI AATT 5 cut(s) 282, 294, 426, 608, 752
MluI ACGCGT 1 cut(s) 198
MnlI CCTC 6 cut(s) 14, 111, 116, 166, 428, 736
MroXI GAANNNNTTC 1 cut(s) 612
MseI TTAA 4 cut(s) 285, 441, 755, 763
MslI CAYNNNNRTG 2 cut(s) 270, 671
MspA1I CMGCKG 1 cut(s) 727
MspCI CTTAAG 1 cut(s) 440
MspR9I CCNGG 1 cut(s) 705
MvaI CCWGG 1 cut(s) 705
MvnI CGCG 2 cut(s) 200, 474
NdeI CATATG 1 cut(s) 34
NdeII GATC 6 cut(s) 24, 240, 262, 369, 377, 475
NheI GCTAGC 1 cut(s) 538
NlaIII CATG 3 cut(s) 262, 269, 676
NlaIV GGNNCC 1 cut(s) 596
NmeAIII GCCGAG 1 cut(s) 146
NmuCI GTSAC 2 cut(s) 512, 583
NspV TTCGAA 1 cut(s) 321
PagI TCATGA 1 cut(s) 265
PceI AGGCCT 1 cut(s) 438
PdmI GAANNNNTTC 1 cut(s) 612
PkrI GCNGC 1 cut(s) 726
PshAI GACNNNNGTC 1 cut(s) 405
Psp6I CCWGG 1 cut(s) 703
PspGI CCWGG 1 cut(s) 703
PspN4I GGNNCC 1 cut(s) 596
PstNI CAGNNNCTG 1 cut(s) 727
PsuI RGATCY 2 cut(s) 24, 377
PvuII CAGCTG 1 cut(s) 727
RsaI GTAC 5 cut(s) 56, 63, 413, 446, 596
RsaNI GTAC 5 cut(s) 55, 62, 412, 445, 595
RseI CAYNNNNRTG 2 cut(s) 270, 671
SaqAI TTAA 4 cut(s) 285, 441, 755, 763
SatI GCNGC 1 cut(s) 725
Sau3AI GATC 6 cut(s) 24, 240, 262, 369, 377, 475
ScaI AGTACT 1 cut(s) 413
ScrFI CCNGG 1 cut(s) 705
SduI GDGCHC 1 cut(s) 604
SfaNI GCATC 1 cut(s) 208
SfuI TTCGAA 1 cut(s) 321
SmiMI CAYNNNNRTG 2 cut(s) 270, 671
SmlI CTYRAG 1 cut(s) 440
SmoI CTYRAG 1 cut(s) 440
Sse9I AATT 5 cut(s) 282, 294, 426, 608, 752
SseBI AGGCCT 1 cut(s) 438
SsiI CCGC 1 cut(s) 472
SspMI CTAG 1 cut(s) 539
StuI AGGCCT 1 cut(s) 438
StyD4I CCNGG 1 cut(s) 703
TaaI ACNGT 2 cut(s) 512, 599
TaiI ACGT 2 cut(s) 551, 720
TaqI TCGA 3 cut(s) 78, 321, 551
TasI AATT 5 cut(s) 282, 294, 426, 608, 752
TatI WGTACW 4 cut(s) 54, 61, 411, 444
Tru1I TTAA 4 cut(s) 285, 441, 755, 763
Tru9I TTAA 4 cut(s) 285, 441, 755, 763
TseFI GTSAC 2 cut(s) 512, 583
TseI GCWGC 1 cut(s) 724
Tsp45I GTSAC 2 cut(s) 512, 583
TspDTI ATGAA 2 cut(s) 183, 661
Vha464I CTTAAG 1 cut(s) 440
VneI GTGCAC 1 cut(s) 600
XapI RAATTY 1 cut(s) 426
XmnI GAANNNNTTC 1 cut(s) 612
XspI CTAG 1 cut(s) 539
ZrmI AGTACT 1 cut(s) 413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.