Rh5CG441800

mitogen-activated protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0004899
Physical Location & Seq
Forward (+)
61410369 .. 61415551
5183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG441800.1

Sequence Viewer

Length: 846 bp
ATGGATCATGACAATATTGTCAAAATTAAGGACATCATAAGGCCACCAGATAAGGAGAATTTCAATGACGTTTACATTGTATATGAATTGATGGACACTGACCTAAATCAGATAATAAACTCCAGCCAGCCTTTGACAGATGATCACTGTCAGTACTTTCTGTATCAATTGCTGCGGGGATTGAAGTACATACACTCTGCGCATGTTTTGCACCGTGATCTGAAACCAAGCAATCTGCTTCTCAAAGCAAATTGTGACCTTAAGATTTGTGATTTTGGGCTTGCAAGAACTACATCTGAGACAGATTTCATGACAGAATATGTTGTCACTCGTTGGTATCGAGCCCCAGAATTACTACTCAACTGTTCTGAATACACTGCGGCTATTGATATTTGGTCAGTAGGATGTATTTTCATGGAGATTCTGATGAGGGAACCACTGTTCCCTGGTAAAGACTATGTACAGCAGTTGGGTCTCATAACTGAGCTACTAGGTTCACCGGAAGATTCAAATCTTGGCTTTCTAAGAAGTGAAAATGCTAAGAAGTATGTTAAGCAGCTCCCACATGTCCCAAAGAAACCCTTTGCTCAGAAGTTCCCAAATGTCTCACCAGTGGCAATTGATCTTGCGGAAAAAATGCTAGTTTTTGATCCAAGCAAACGTATAACTGTTGAGGAAGCATTGAATCATCCATATTTATCAAGTCTTCATGCGATCAACGAGGAGCCCATTTGCCCGTCTCCTTTCGTCTTTGATTTTGAGCAGGCATCCCTGGATGAAGAAGACATAAAGGAGCTCGTATGGAGGGAGTCTCTGCACTTCAACCCAGATAATATGCAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01521 ko01522 ko01524 ko04010 ko04011 ko04012 ko04013 ko04014 ko04015 ko04022 ko04024 ko04062 ko04066 ko04068 ko04071 ko04072 ko04114 ko04140 ko04150 ko04151 ko04210 ko04214 ko04218 ko04261 ko04270 ko04320 ko04350 ko04360 ko04370 ko04371 ko04380 ko04510 ko04520 ko04540 ko04550 ko04611 ko04620 ko04621 ko04650 ko04657 ko04658 ko04659 ko04660 ko04662 ko04664 ko04666 ko04668 ko04713 ko04720 ko04722 ko04723 ko04724 ko04725 ko04726 ko04730 ko04810 ko04910 ko04912 ko04914 ko04915 ko04916 ko04917 ko04919 ko04921 ko04926 ko04930 ko04933 ko04934 ko04960 ko05010 ko05020 ko05034 ko05131 ko05132 ko05133 ko05140 ko05142 ko05145 ko05152 ko05160 ko05161 ko05164 ko05165 ko05167 ko05200 ko05203 ko05205 ko05210 ko05211 ko05212 ko05213 ko05214 ko05215 ko05216 ko05218 ko05219 ko05220 ko05221 ko05223 ko05224 ko05225 ko05226 ko05230 ko05231 map01521 map01522 map01524 map04010 map04011 map04012 map04013 map04014 map04015 map04022 map04024 map04062 map04066 map04068 map04071 map04072 map04114 map04140 map04150 map04151 map04210 map04214 map04218 map04261 map04270 map04320 map04350 map04360 map04370 map04371 map04380 map04510 map04520 map04540 map04550 map04611 map04620 map04621 map04650 map04657 map04658 map04659 map04660 map04662 map04664 map04666 map04668 map04713 map04720 map04722 map04723 map04724 map04725 map04726 map04730 map04810 map04910 map04912 map04914 map04915 map04916 map04917 map04919 map04921 map04926 map04930 map04933 map04934 map04960 map05010 map05020 map05034 map05131 map05132 map05133 map05140 map05142 map05145 map05152 map05160 map05161 map05164 map05165 map05167 map05200 map05203 map05205 map05210 map05211 map05212 map05213 map05214 map05215 map05216 map05218 map05219 map05220 map05221 map05223 map05224 map05225 map05226 map05230 map05231
Pfam Domains
Protein Families
Pkinase

Protein Analysis

281

Amino Acids

32.55

Weight (kDa)

4.91

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 1 - 233 1.2e-56 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 2 - 143 2.2e-23 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 17
Acc16I TGCGCA 1 cut(s) 201
AciI CCGC 3 cut(s) 175, 380, 629
AclWI GGATC 2 cut(s) 12, 644
AcsI RAATTY 1 cut(s) 58
AfaI GTAC 3 cut(s) 155, 188, 462
AflII CTTAAG 1 cut(s) 260
AflIII ACRYGT 1 cut(s) 565
AgsI TTSAA 5 cut(s) 64, 184, 510, 685, 823
AjnI CCWGG 2 cut(s) 445, 771
AloI GAACNNNNNNTCC 4 cut(s) 425, 426, 457, 458
AluBI AGCT 3 cut(s) 487, 559, 796
AluI AGCT 3 cut(s) 487, 559, 796
Alw21I GWGCWC 1 cut(s) 798
Alw26I GTCTC 5 cut(s) 293, 479, 610, 744, 816
AlwI GGATC 2 cut(s) 12, 644
AoxI GGCC 1 cut(s) 41
ApeKI GCWGC 2 cut(s) 172, 556
ApoI RAATTY 1 cut(s) 58
AspLEI GCGC 1 cut(s) 202
AsuHPI GGTGA 2 cut(s) 489, 600
BanII GRGCYC 3 cut(s) 346, 729, 798
BbsI GAAGAC 2 cut(s) 698, 789
Bbv12I GWGCWC 1 cut(s) 798
BbvI GCAGC 2 cut(s) 159, 568
BccI CCATC 1 cut(s) 85
BciT130I CCWGG 2 cut(s) 447, 773
BclI TGATCA 1 cut(s) 142
BcoDI GTCTC 5 cut(s) 293, 479, 610, 744, 816
BfaI CTAG 2 cut(s) 491, 641
BfrI CTTAAG 1 cut(s) 260
BisI GCNGC 3 cut(s) 173, 381, 557
BlsI GCNGC 3 cut(s) 174, 382, 558
BmcAI AGTACT 1 cut(s) 155
Bme1390I CCNGG 2 cut(s) 447, 773
BmiI GGNNCC 2 cut(s) 435, 726
BmrFI CCNGG 2 cut(s) 447, 773
BmsI GCATC 1 cut(s) 776
BpiI GAAGAC 2 cut(s) 698, 789
BplI GAGNNNNNCTC 2 cut(s) 796, 828
BpmI CTGGAG 1 cut(s) 106
BsaBI GATNNNNATC 1 cut(s) 510
BsaI GGTCTC 1 cut(s) 479
BsaJI CCNNGG 2 cut(s) 445, 771
BsaWI WCCGGW 1 cut(s) 499
Bse1I ACTGG 1 cut(s) 611
Bse8I GATNNNNATC 1 cut(s) 510
BseBI CCWGG 2 cut(s) 447, 773
BseDI CCNNGG 2 cut(s) 445, 771
BseGI GGATG 4 cut(s) 410, 688, 767, 781
BseJI GATNNNNATC 1 cut(s) 510
BseMII CTCAG 3 cut(s) 288, 474, 602
BseNI ACTGG 1 cut(s) 611
BseRI GAGGAG 1 cut(s) 737
BseXI GCAGC 2 cut(s) 159, 568
BsgI GTGCAG 1 cut(s) 800
BshFI GGCC 1 cut(s) 43
BsiHKAI GWGCWC 1 cut(s) 798
BsiSI CCGG 1 cut(s) 500
BslFI GGGAC 1 cut(s) 554
BsmAI GTCTC 5 cut(s) 293, 479, 610, 744, 816
BsmBI CGTCTC 1 cut(s) 744
BsmFI GGGAC 1 cut(s) 554
BsnI GGCC 1 cut(s) 43
Bso31I GGTCTC 1 cut(s) 479
Bsp1286I GDGCHC 3 cut(s) 346, 729, 798
Bsp1407I TGTACA 1 cut(s) 460
Bsp143I GATC 6 cut(s) 4, 142, 217, 622, 649, 714
BspACI CCGC 3 cut(s) 175, 380, 629
BspANI GGCC 1 cut(s) 43
BspCNI CTCAG 3 cut(s) 289, 475, 601
BspHI TCATGA 2 cut(s) 7, 309
BspLI GGNNCC 2 cut(s) 435, 726
BspPI GGATC 2 cut(s) 12, 644
BspTI CTTAAG 1 cut(s) 260
BspTNI GGTCTC 1 cut(s) 479
BsrGI TGTACA 1 cut(s) 460
BsrI ACTGG 1 cut(s) 611
BssECI CCNNGG 2 cut(s) 445, 771
BssMI GATC 6 cut(s) 4, 142, 217, 622, 649, 714
Bst2UI CCWGG 2 cut(s) 447, 773
Bst4CI ACNGT 5 cut(s) 149, 215, 365, 441, 670
BstAFI CTTAAG 1 cut(s) 260
BstAPI GCANNNNNTGC 1 cut(s) 208
BstAUI TGTACA 1 cut(s) 460
BstC8I GCNNGC 3 cut(s) 128, 282, 765
BstDEI CTNAG 5 cut(s) 297, 483, 524, 540, 588
BstF5I GGATG 4 cut(s) 410, 688, 767, 781
BstHHI GCGC 1 cut(s) 202
BstKTI GATC 6 cut(s) 7, 145, 220, 625, 652, 717
BstMAI GTCTC 5 cut(s) 293, 479, 610, 744, 816
BstMBI GATC 6 cut(s) 4, 142, 217, 622, 649, 714
BstMWI GCNNNNNNNGC 1 cut(s) 208
BstNI CCWGG 2 cut(s) 447, 773
BstNSI RCATGY 2 cut(s) 206, 569
BstSCI CCNGG 2 cut(s) 445, 771
BstV1I GCAGC 2 cut(s) 159, 568
BstV2I GAAGAC 2 cut(s) 698, 789
BsuRI GGCC 1 cut(s) 43
BtsCI GGATG 4 cut(s) 410, 688, 767, 781
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 5 cut(s) 96, 145, 375, 437, 618
Cac8I GCNNGC 3 cut(s) 128, 282, 765
CciI TCATGA 2 cut(s) 7, 309
CfoI GCGC 1 cut(s) 202
Csp6I GTAC 3 cut(s) 154, 187, 461
CviAII CATG 6 cut(s) 8, 203, 310, 415, 566, 710
CviQI GTAC 3 cut(s) 154, 187, 461
DdeI CTNAG 5 cut(s) 297, 483, 524, 540, 588
DpnI GATC 6 cut(s) 6, 144, 219, 624, 651, 716
DpnII GATC 6 cut(s) 4, 142, 217, 622, 649, 714
DrdI GACNNNNNNGTC 1 cut(s) 17
DseDI GACNNNNNNGTC 1 cut(s) 17
Ecl136II GAGCTC 1 cut(s) 796
Eco24I GRGCYC 3 cut(s) 346, 729, 798
Eco31I GGTCTC 1 cut(s) 479
Eco53kI GAGCTC 1 cut(s) 796
EcoICRI GAGCTC 1 cut(s) 796
EcoRII CCWGG 2 cut(s) 445, 771
EcoT38I GRGCYC 3 cut(s) 346, 729, 798
Esp3I CGTCTC 1 cut(s) 744
FaeI CATG 6 cut(s) 11, 206, 313, 418, 569, 713
FalI AAGNNNNNCTT 2 cut(s) 566, 598
FaqI GGGAC 1 cut(s) 554
FatI CATG 6 cut(s) 7, 202, 309, 414, 565, 709
FauI CCCGC 1 cut(s) 168
FbaI TGATCA 1 cut(s) 142
Fnu4HI GCNGC 3 cut(s) 173, 381, 557
FokI GGATG 4 cut(s) 417, 675, 754, 788
FriOI GRGCYC 3 cut(s) 346, 729, 798
Fsp4HI GCNGC 3 cut(s) 173, 381, 557
FspBI CTAG 2 cut(s) 491, 641
FspI TGCGCA 1 cut(s) 201
GlaI GCGC 1 cut(s) 201
GluI GCNGC 3 cut(s) 173, 381, 557
GsuI CTGGAG 1 cut(s) 106
HaeIII GGCC 1 cut(s) 43
HapII CCGG 1 cut(s) 500
HhaI GCGC 1 cut(s) 202
Hin1II CATG 6 cut(s) 11, 206, 313, 418, 569, 713
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HinfI GANTC 4 cut(s) 421, 506, 685, 809
HpaII CCGG 1 cut(s) 500
HphI GGTGA 2 cut(s) 489, 600
Hpy166II GTNNAC 2 cut(s) 73, 497
Hpy188I TCNGA 6 cut(s) 111, 222, 298, 370, 426, 591
Hpy188III TCNNGA 2 cut(s) 8, 310
Hpy8I GTNNAC 2 cut(s) 73, 497
HpyCH4III ACNGT 5 cut(s) 149, 215, 365, 441, 670
HpyCH4IV ACGT 2 cut(s) 69, 661
HpyCH4V TGCA 4 cut(s) 211, 284, 817, 838
HpyF10VI GCNNNNNNNGC 1 cut(s) 208
HpyF3I CTNAG 5 cut(s) 297, 483, 524, 540, 588
HpySE526I ACGT 2 cut(s) 69, 661
Hsp92II CATG 6 cut(s) 11, 206, 313, 418, 569, 713
HspAI GCGC 1 cut(s) 200
Ksp22I TGATCA 1 cut(s) 142
Kzo9I GATC 6 cut(s) 4, 142, 217, 622, 649, 714
LmnI GCTCC 3 cut(s) 564, 724, 793
Lsp1109I GCAGC 2 cut(s) 159, 568
LweI GCATC 1 cut(s) 776
MaeI CTAG 2 cut(s) 491, 641
MaeII ACGT 2 cut(s) 69, 661
MaeIII GTNAC 2 cut(s) 254, 325
MalI GATC 6 cut(s) 6, 144, 219, 624, 651, 716
MboI GATC 6 cut(s) 4, 142, 217, 622, 649, 714
MboII GAAGA 4 cut(s) 515, 698, 791, 794
MfeI CAATTG 2 cut(s) 167, 618
MhlI GDGCHC 3 cut(s) 346, 729, 798
MluCI AATT 7 cut(s) 24, 58, 86, 167, 250, 350, 618
MlyI GAGTC 1 cut(s) 818
MnlI CCTC 4 cut(s) 423, 667, 715, 798
MseI TTAA 3 cut(s) 27, 261, 552
MspCI CTTAAG 1 cut(s) 260
MspI CCGG 1 cut(s) 500
MspR9I CCNGG 2 cut(s) 447, 773
MunI CAATTG 2 cut(s) 167, 618
MvaI CCWGG 2 cut(s) 447, 773
MwoI GCNNNNNNNGC 1 cut(s) 208
NdeII GATC 6 cut(s) 4, 142, 217, 622, 649, 714
NlaIII CATG 6 cut(s) 11, 206, 313, 418, 569, 713
NlaIV GGNNCC 2 cut(s) 435, 726
NmuCI GTSAC 2 cut(s) 254, 325
NsbI TGCGCA 1 cut(s) 201
NspI RCATGY 2 cut(s) 206, 569
PagI TCATGA 2 cut(s) 7, 309
PciI ACATGT 1 cut(s) 565
PcsI WCGNNNNNNNCGW 1 cut(s) 337
PfeI GAWTC 3 cut(s) 421, 506, 685
PkrI GCNGC 3 cut(s) 174, 382, 558
PleI GAGTC 1 cut(s) 817
PpsI GAGTC 1 cut(s) 817
PscI ACATGT 1 cut(s) 565
Psp124BI GAGCTC 1 cut(s) 798
Psp6I CCWGG 2 cut(s) 445, 771
PspGI CCWGG 2 cut(s) 445, 771
PspN4I GGNNCC 2 cut(s) 435, 726
RsaI GTAC 3 cut(s) 155, 188, 462
RsaNI GTAC 3 cut(s) 154, 187, 461
SacI GAGCTC 1 cut(s) 798
SaqAI TTAA 3 cut(s) 27, 261, 552
SatI GCNGC 3 cut(s) 173, 381, 557
Sau3AI GATC 6 cut(s) 4, 142, 217, 622, 649, 714
ScaI AGTACT 1 cut(s) 155
SchI GAGTC 1 cut(s) 818
ScrFI CCNGG 2 cut(s) 447, 773
SduI GDGCHC 3 cut(s) 346, 729, 798
SetI ASST 8 cut(s) 72, 105, 261, 489, 496, 561, 664, 798
SfaNI GCATC 1 cut(s) 776
SmlI CTYRAG 1 cut(s) 260
SmoI CTYRAG 1 cut(s) 260
Sse9I AATT 7 cut(s) 24, 58, 86, 167, 250, 350, 618
SsiI CCGC 3 cut(s) 175, 380, 629
SspI AATATT 1 cut(s) 16
SspMI CTAG 2 cut(s) 491, 641
SstI GAGCTC 1 cut(s) 798
StyD4I CCNGG 2 cut(s) 445, 771
TaaI ACNGT 5 cut(s) 149, 215, 365, 441, 670
TaiI ACGT 2 cut(s) 72, 664
TaqI TCGA 1 cut(s) 340
TasI AATT 7 cut(s) 24, 58, 86, 167, 250, 350, 618
TatI WGTACW 3 cut(s) 153, 186, 460
TauI GCSGC 1 cut(s) 383
TfiI GAWTC 3 cut(s) 421, 506, 685
Tru1I TTAA 3 cut(s) 27, 261, 552
Tru9I TTAA 3 cut(s) 27, 261, 552
TscAI CASTG 5 cut(s) 103, 152, 382, 444, 618
TseFI GTSAC 2 cut(s) 254, 325
TseI GCWGC 2 cut(s) 172, 556
Tsp45I GTSAC 2 cut(s) 254, 325
TspDTI ATGAA 5 cut(s) 99, 298, 403, 698, 792
TspRI CASTG 5 cut(s) 103, 152, 382, 444, 618
Vha464I CTTAAG 1 cut(s) 260
XapI RAATTY 1 cut(s) 58
XceI RCATGY 2 cut(s) 206, 569
XspI CTAG 2 cut(s) 491, 641
ZrmI AGTACT 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.