Belongs to the GRAS family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14920 AT2G01570 |
| fragaria_vesca | FvH4_4g34110 |
| malus_domestica | MD13G1022100.v1.1 MD16G1023300.v1.1 |
| prunus_persica | Prupe.1G329600_v2.0.a1 |
| pyrus_communis | pycom13g02070 pycom16g02040 pycom16g02050 |
| rosa_chinensis | RchiOBHm_Chr4g0443621 |
| rosa_laevigata | RLG00000005909 |
| rosa_multiflora | Rmu_sc0001118.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00384170 |
| rosa_samantha | Rh4AG403600 Rh4AG405600 Rh4BG416600 Rh4CG431100 Rh4DG412200 |
| rosa_wichuraiana | Rw4G034820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 454, 888 |
| AccB1I | GGYRCC | 1 cut(s) | 928 |
| AccBSI | CCGCTC | 1 cut(s) | 1564 |
| AccI | GTMKAC | 1 cut(s) | 392 |
| AccII | CGCG | 4 cut(s) | 326, 515, 653, 655 |
| AclI | AACGTT | 2 cut(s) | 1350, 1394 |
| AcoI | YGGCCR | 1 cut(s) | 851 |
| AcuI | CTGAAG | 2 cut(s) | 552, 701 |
| AcvI | CACGTG | 1 cut(s) | 246 |
| AcyI | GRCGYC | 1 cut(s) | 426 |
| AfaI | GTAC | 3 cut(s) | 299, 1010, 1293 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1581 |
| AflIII | ACRYGT | 1 cut(s) | 243 |
| AgeI | ACCGGT | 1 cut(s) | 1413 |
| AgsI | TTSAA | 7 cut(s) | 161, 182, 412, 797, 848, 1082, 1495 |
| AjnI | CCWGG | 3 cut(s) | 474, 883, 1132 |
| Alw26I | GTCTC | 5 cut(s) | 206, 509, 674, 728, 1541 |
| Ama87I | CYCGRG | 1 cut(s) | 149 |
| AoxI | GGCC | 1 cut(s) | 851 |
| ApeKI | GCWGC | 2 cut(s) | 154, 1439 |
| AsiGI | ACCGGT | 1 cut(s) | 1413 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 537, 792, 1415 |
| AspLEI | GCGC | 5 cut(s) | 517, 530, 655, 859, 877 |
| AspS9I | GGNCC | 3 cut(s) | 890, 920, 1367 |
| AsuC2I | CCSGG | 1 cut(s) | 318 |
| AsuHPI | GGTGA | 5 cut(s) | 256, 332, 586, 1174, 1514 |
| AsuII | TTCGAA | 1 cut(s) | 1454 |
| AvaI | CYCGRG | 1 cut(s) | 149 |
| AvaII | GGWCC | 3 cut(s) | 890, 920, 1367 |
| BanI | GGYRCC | 1 cut(s) | 928 |
| BbrPI | CACGTG | 1 cut(s) | 246 |
| BbsI | GAAGAC | 4 cut(s) | 47, 69, 192, 836 |
| BbvCI | CCTCAGC | 1 cut(s) | 984 |
| BbvI | GCAGC | 2 cut(s) | 166, 1426 |
| BccI | CCATC | 1 cut(s) | 1358 |
| BceAI | ACGGC | 7 cut(s) | 91, 439, 465, 581, 783, 1513, 1546 |
| BciT130I | CCWGG | 3 cut(s) | 476, 885, 1134 |
| BcnI | CCSGG | 1 cut(s) | 318 |
| BcoDI | GTCTC | 5 cut(s) | 206, 509, 674, 728, 1541 |
| BfaI | CTAG | 1 cut(s) | 92 |
| BfmI | CTRYAG | 2 cut(s) | 441, 558 |
| BfoI | RGCGCY | 1 cut(s) | 860 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1577 |
| BglII | AGATCT | 1 cut(s) | 1341 |
| BisI | GCNGC | 5 cut(s) | 155, 376, 656, 1437, 1440 |
| BlsI | GCNGC | 5 cut(s) | 156, 377, 657, 1438, 1441 |
| Bme1390I | CCNGG | 4 cut(s) | 318, 476, 885, 1134 |
| Bme18I | GGWCC | 3 cut(s) | 890, 920, 1367 |
| BmeT110I | CYCGRG | 1 cut(s) | 149 |
| BmgT120I | GGNCC | 3 cut(s) | 890, 920, 1367 |
| BmiI | GGNNCC | 2 cut(s) | 930, 1412 |
| BmrFI | CCNGG | 4 cut(s) | 318, 476, 885, 1134 |
| BmsI | GCATC | 3 cut(s) | 711, 1036, 1044 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1533 |
| BpiI | GAAGAC | 4 cut(s) | 47, 69, 192, 836 |
| Bpu10I | CCTNAGC | 1 cut(s) | 984 |
| Bpu14I | TTCGAA | 1 cut(s) | 1454 |
| BpuEI | CTTGAG | 2 cut(s) | 734, 1079 |
| BpuMI | CCSGG | 1 cut(s) | 318 |
| Bsa29I | ATCGAT | 2 cut(s) | 348, 1143 |
| BsaAI | YACGTR | 2 cut(s) | 246, 390 |
| BsaBI | GATNNNNATC | 1 cut(s) | 15 |
| BsaHI | GRCGYC | 1 cut(s) | 426 |
| BsaJI | CCNNGG | 2 cut(s) | 370, 1575 |
| BsaWI | WCCGGW | 5 cut(s) | 903, 911, 931, 1177, 1413 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 689, 719 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1581 |
| Bse118I | RCCGGY | 3 cut(s) | 853, 925, 1413 |
| Bse8I | GATNNNNATC | 1 cut(s) | 15 |
| BseBI | CCWGG | 3 cut(s) | 476, 885, 1134 |
| BseCI | ATCGAT | 2 cut(s) | 348, 1143 |
| BseDI | CCNNGG | 2 cut(s) | 370, 1575 |
| BseGI | GGATG | 2 cut(s) | 88, 119 |
| BseJI | GATNNNNATC | 1 cut(s) | 15 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1581 |
| BseMII | CTCAG | 5 cut(s) | 155, 201, 444, 975, 1236 |
| BseRI | GAGGAG | 2 cut(s) | 396, 1535 |
| BseXI | GCAGC | 2 cut(s) | 166, 1426 |
| BseYI | CCCAGC | 1 cut(s) | 1427 |
| BsgI | GTGCAG | 1 cut(s) | 1425 |
| Bsh1236I | CGCG | 4 cut(s) | 326, 515, 653, 655 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1143, 1562 |
| BshFI | GGCC | 1 cut(s) | 853 |
| BshNI | GGYRCC | 1 cut(s) | 928 |
| BshTI | ACCGGT | 1 cut(s) | 1413 |
| BshVI | ATCGAT | 2 cut(s) | 348, 1143 |
| BsiEI | CGRYCG | 2 cut(s) | 1143, 1562 |
| BsiHKCI | CYCGRG | 1 cut(s) | 149 |
| BsiSI | CCGG | 9 cut(s) | 230, 318, 854, 904, 912, 926, 932, 1178, 1414 |
| BslFI | GGGAC | 1 cut(s) | 1140 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1581 |
| BsmAI | GTCTC | 5 cut(s) | 206, 509, 674, 728, 1541 |
| BsmBI | CGTCTC | 2 cut(s) | 509, 674 |
| BsmFI | GGGAC | 1 cut(s) | 1140 |
| BsmI | GAATGC | 1 cut(s) | 1462 |
| BsnI | GGCC | 1 cut(s) | 853 |
| BsoBI | CYCGRG | 1 cut(s) | 149 |
| Bsp119I | TTCGAA | 1 cut(s) | 1454 |
| Bsp143I | GATC | 7 cut(s) | 10, 190, 301, 1039, 1140, 1234, 1341 |
| BspANI | GGCC | 1 cut(s) | 853 |
| BspCNI | CTCAG | 5 cut(s) | 154, 202, 445, 976, 1237 |
| BspDI | ATCGAT | 2 cut(s) | 348, 1143 |
| BspFNI | CGCG | 4 cut(s) | 326, 515, 653, 655 |
| BspHI | TCATGA | 2 cut(s) | 952, 1387 |
| BspLI | GGNNCC | 2 cut(s) | 930, 1412 |
| BspT104I | TTCGAA | 1 cut(s) | 1454 |
| BspT107I | GGYRCC | 1 cut(s) | 928 |
| BsrBI | CCGCTC | 1 cut(s) | 1564 |
| BsrFI | RCCGGY | 3 cut(s) | 853, 925, 1413 |
| BssAI | RCCGGY | 3 cut(s) | 853, 925, 1413 |
| BssECI | CCNNGG | 2 cut(s) | 370, 1575 |
| BssMI | GATC | 7 cut(s) | 10, 190, 301, 1039, 1140, 1234, 1341 |
| BssNAI | GTATAC | 1 cut(s) | 393 |
| BssNI | GRCGYC | 1 cut(s) | 426 |
| BssT1I | CCWWGG | 1 cut(s) | 370 |
| Bst1107I | GTATAC | 1 cut(s) | 393 |
| Bst2UI | CCWGG | 3 cut(s) | 476, 885, 1134 |
| Bst4CI | ACNGT | 6 cut(s) | 71, 217, 497, 559, 668, 1192 |
| Bst6I | CTCTTC | 1 cut(s) | 720 |
| BstACI | GRCGYC | 1 cut(s) | 426 |
| BstBAI | YACGTR | 2 cut(s) | 246, 390 |
| BstBI | TTCGAA | 1 cut(s) | 1454 |
| BstC8I | GCNNGC | 5 cut(s) | 526, 855, 867, 972, 1470 |
| BstDEI | CTNAG | 8 cut(s) | 141, 210, 453, 592, 984, 1064, 1231, 1245 |
| BstF5I | GGATG | 2 cut(s) | 88, 119 |
| BstFNI | CGCG | 4 cut(s) | 326, 515, 653, 655 |
| BstH2I | RGCGCY | 1 cut(s) | 860 |
| BstHHI | GCGC | 5 cut(s) | 517, 530, 655, 859, 877 |
| BstKTI | GATC | 7 cut(s) | 13, 193, 304, 1042, 1143, 1237, 1344 |
| BstMAI | GTCTC | 5 cut(s) | 206, 509, 674, 728, 1541 |
| BstMBI | GATC | 7 cut(s) | 10, 190, 301, 1039, 1140, 1234, 1341 |
| BstMCI | CGRYCG | 2 cut(s) | 1143, 1562 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 137, 423, 521, 776, 980, 1117, 1433, 1577 |
| BstNI | CCWGG | 3 cut(s) | 476, 885, 1134 |
| BstNSI | RCATGY | 1 cut(s) | 470 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1533 |
| BstSCI | CCNGG | 4 cut(s) | 316, 474, 883, 1132 |
| BstSFI | CTRYAG | 2 cut(s) | 441, 558 |
| BstSNI | TACGTA | 1 cut(s) | 390 |
| BstUI | CGCG | 4 cut(s) | 326, 515, 653, 655 |
| BstV1I | GCAGC | 2 cut(s) | 166, 1426 |
| BstV2I | GAAGAC | 4 cut(s) | 47, 69, 192, 836 |
| BstX2I | RGATCY | 1 cut(s) | 1341 |
| BstYI | RGATCY | 1 cut(s) | 1341 |
| BstZ17I | GTATAC | 1 cut(s) | 393 |
| Bsu15I | ATCGAT | 2 cut(s) | 348, 1143 |
| BsuRI | GGCC | 1 cut(s) | 853 |
| BsuTUI | ATCGAT | 2 cut(s) | 348, 1143 |
| BtgZI | GCGATG | 1 cut(s) | 629 |
| BtsCI | GGATG | 2 cut(s) | 88, 119 |
| BtsIMutI | CAGTG | 2 cut(s) | 1188, 1409 |
| Cac8I | GCNNGC | 5 cut(s) | 526, 855, 867, 972, 1470 |
| CciI | TCATGA | 2 cut(s) | 952, 1387 |
| CfoI | GCGC | 5 cut(s) | 517, 530, 655, 859, 877 |
| Cfr10I | RCCGGY | 3 cut(s) | 853, 925, 1413 |
| Cfr13I | GGNCC | 3 cut(s) | 890, 920, 1367 |
| ClaI | ATCGAT | 2 cut(s) | 348, 1143 |
| CseI | GACGC | 4 cut(s) | 332, 415, 491, 1373 |
| CsiI | ACCWGGT | 2 cut(s) | 883, 1132 |
| Csp6I | GTAC | 3 cut(s) | 298, 1009, 1292 |
| CspAI | ACCGGT | 1 cut(s) | 1413 |
| CviAII | CATG | 7 cut(s) | 79, 467, 815, 953, 1315, 1388, 1540 |
| CviQI | GTAC | 3 cut(s) | 298, 1009, 1292 |
| DdeI | CTNAG | 8 cut(s) | 141, 210, 453, 592, 984, 1064, 1231, 1245 |
| DpnI | GATC | 7 cut(s) | 12, 192, 303, 1041, 1142, 1236, 1343 |
| DpnII | GATC | 7 cut(s) | 10, 190, 301, 1039, 1140, 1234, 1341 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 454, 888 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 454, 888 |
| EaeI | YGGCCR | 1 cut(s) | 851 |
| Eam1104I | CTCTTC | 1 cut(s) | 720 |
| EarI | CTCTTC | 1 cut(s) | 720 |
| EciI | GGCGGA | 3 cut(s) | 248, 393, 673 |
| Eco105I | TACGTA | 1 cut(s) | 390 |
| Eco130I | CCWWGG | 1 cut(s) | 370 |
| Eco47I | GGWCC | 3 cut(s) | 890, 920, 1367 |
| Eco57I | CTGAAG | 2 cut(s) | 552, 701 |
| Eco72I | CACGTG | 1 cut(s) | 246 |
| Eco88I | CYCGRG | 1 cut(s) | 149 |
| EcoRII | CCWGG | 3 cut(s) | 474, 883, 1132 |
| EcoT14I | CCWWGG | 1 cut(s) | 370 |
| ErhI | CCWWGG | 1 cut(s) | 370 |
| Esp3I | CGTCTC | 2 cut(s) | 509, 674 |
| FaeI | CATG | 7 cut(s) | 82, 470, 818, 956, 1318, 1391, 1543 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 177, 209 |
| FaqI | GGGAC | 1 cut(s) | 1140 |
| FatI | CATG | 7 cut(s) | 78, 466, 814, 952, 1314, 1387, 1539 |
| FblI | GTMKAC | 1 cut(s) | 392 |
| Fnu4HI | GCNGC | 5 cut(s) | 155, 376, 656, 1437, 1440 |
| FokI | GGATG | 2 cut(s) | 95, 106 |
| Fsp4HI | GCNGC | 5 cut(s) | 155, 376, 656, 1437, 1440 |
| FspBI | CTAG | 1 cut(s) | 92 |
| GlaI | GCGC | 5 cut(s) | 516, 529, 654, 858, 876 |
| GluI | GCNGC | 5 cut(s) | 155, 376, 656, 1437, 1440 |
| GsaI | CCCAGC | 1 cut(s) | 1431 |
| HaeII | RGCGCY | 1 cut(s) | 860 |
| HaeIII | GGCC | 1 cut(s) | 853 |
| HapII | CCGG | 9 cut(s) | 230, 318, 854, 904, 912, 926, 932, 1178, 1414 |
| HgaI | GACGC | 4 cut(s) | 332, 415, 491, 1373 |
| HhaI | GCGC | 5 cut(s) | 517, 530, 655, 859, 877 |
| Hin1I | GRCGYC | 1 cut(s) | 426 |
| Hin1II | CATG | 7 cut(s) | 82, 470, 818, 956, 1318, 1391, 1543 |
| Hin6I | GCGC | 5 cut(s) | 515, 528, 653, 857, 875 |
| HinP1I | GCGC | 5 cut(s) | 515, 528, 653, 857, 875 |
| HincII | GTYRAC | 4 cut(s) | 459, 481, 909, 1096 |
| HindII | GTYRAC | 4 cut(s) | 459, 481, 909, 1096 |
| HindIII | AAGCTT | 1 cut(s) | 789 |
| HpaI | GTTAAC | 2 cut(s) | 909, 1096 |
| HpaII | CCGG | 9 cut(s) | 230, 318, 854, 904, 912, 926, 932, 1178, 1414 |
| HphI | GGTGA | 5 cut(s) | 256, 332, 586, 1174, 1514 |
| Hpy188III | TCNNGA | 7 cut(s) | 32, 182, 785, 953, 1043, 1304, 1388 |
| Hpy99I | CGWCG | 6 cut(s) | 71, 286, 431, 451, 682, 1270 |
| HpyAV | CCTTC | 1 cut(s) | 1280 |
| HpyCH4III | ACNGT | 6 cut(s) | 71, 217, 497, 559, 668, 1192 |
| HpyCH4IV | ACGT | 6 cut(s) | 245, 389, 996, 1268, 1350, 1394 |
| HpyCH4V | TGCA | 5 cut(s) | 724, 865, 1255, 1347, 1442 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 137, 423, 521, 776, 980, 1117, 1433, 1577 |
| HpyF3I | CTNAG | 8 cut(s) | 141, 210, 453, 592, 984, 1064, 1231, 1245 |
| HpySE526I | ACGT | 6 cut(s) | 245, 389, 996, 1268, 1350, 1394 |
| Hsp92I | GRCGYC | 1 cut(s) | 426 |
| Hsp92II | CATG | 7 cut(s) | 82, 470, 818, 956, 1318, 1391, 1543 |
| HspAI | GCGC | 5 cut(s) | 515, 528, 653, 857, 875 |
| KroI | GCCGGC | 1 cut(s) | 853 |
| KroNI | GCCGGC | 1 cut(s) | 855 |
| KspAI | GTTAAC | 2 cut(s) | 909, 1096 |
| Kzo9I | GATC | 7 cut(s) | 10, 190, 301, 1039, 1140, 1234, 1341 |
| LmnI | GCTCC | 2 cut(s) | 235, 611 |
| Lsp1109I | GCAGC | 2 cut(s) | 166, 1426 |
| LweI | GCATC | 3 cut(s) | 711, 1036, 1044 |
| MabI | ACCWGGT | 2 cut(s) | 883, 1132 |
| MaeI | CTAG | 1 cut(s) | 92 |
| MaeII | ACGT | 6 cut(s) | 245, 389, 996, 1268, 1350, 1394 |
| MaeIII | GTNAC | 4 cut(s) | 71, 104, 320, 1526 |
| MalI | GATC | 7 cut(s) | 12, 192, 303, 1041, 1142, 1236, 1343 |
| MbiI | CCGCTC | 1 cut(s) | 1564 |
| MboI | GATC | 7 cut(s) | 10, 190, 301, 1039, 1140, 1234, 1341 |
| MflI | RGATCY | 1 cut(s) | 1341 |
| MluCI | AATT | 3 cut(s) | 915, 937, 1597 |
| MlyI | GAGTC | 7 cut(s) | 464, 476, 694, 844, 1256, 1271, 1408 |
| MmeI | TCCRAC | 2 cut(s) | 1263, 1299 |
| MroNI | GCCGGC | 1 cut(s) | 853 |
| MroXI | GAANNNNTTC | 3 cut(s) | 537, 792, 1415 |
| MseI | TTAA | 6 cut(s) | 273, 306, 908, 1095, 1173, 1464 |
| MspI | CCGG | 9 cut(s) | 230, 318, 854, 904, 912, 926, 932, 1178, 1414 |
| MspR9I | CCNGG | 4 cut(s) | 318, 476, 885, 1134 |
| Mva1269I | GAATGC | 1 cut(s) | 1462 |
| MvaI | CCWGG | 3 cut(s) | 476, 885, 1134 |
| MvnI | CGCG | 4 cut(s) | 326, 515, 653, 655 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 137, 423, 521, 776, 980, 1117, 1433, 1577 |
| NaeI | GCCGGC | 1 cut(s) | 855 |
| NciI | CCSGG | 1 cut(s) | 318 |
| NdeII | GATC | 7 cut(s) | 10, 190, 301, 1039, 1140, 1234, 1341 |
| NgoMIV | GCCGGC | 1 cut(s) | 853 |
| NlaIII | CATG | 7 cut(s) | 82, 470, 818, 956, 1318, 1391, 1543 |
| NlaIV | GGNNCC | 2 cut(s) | 930, 1412 |
| NmeAIII | GCCGAG | 3 cut(s) | 319, 442, 1556 |
| NmuCI | GTSAC | 2 cut(s) | 320, 1526 |
| NspI | RCATGY | 1 cut(s) | 470 |
| NspV | TTCGAA | 1 cut(s) | 1454 |
| PaeR7I | CTCGAG | 1 cut(s) | 149 |
| PagI | TCATGA | 2 cut(s) | 952, 1387 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 297, 359 |
| PctI | GAATGC | 1 cut(s) | 1462 |
| PdiI | GCCGGC | 1 cut(s) | 855 |
| PdmI | GAANNNNTTC | 3 cut(s) | 537, 792, 1415 |
| PflFI | GACNNNGTC | 1 cut(s) | 1310 |
| PinAI | ACCGGT | 1 cut(s) | 1413 |
| PkrI | GCNGC | 5 cut(s) | 156, 377, 657, 1438, 1441 |
| Ple19I | CGATCG | 1 cut(s) | 1143 |
| PleI | GAGTC | 7 cut(s) | 463, 476, 693, 843, 1255, 1271, 1407 |
| PmaCI | CACGTG | 1 cut(s) | 246 |
| PmlI | CACGTG | 1 cut(s) | 246 |
| PpsI | GAGTC | 7 cut(s) | 463, 476, 693, 843, 1255, 1271, 1407 |
| Ppu21I | YACGTR | 2 cut(s) | 246, 390 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1533 |
| Psp1406I | AACGTT | 2 cut(s) | 1350, 1394 |
| Psp6I | CCWGG | 3 cut(s) | 474, 883, 1132 |
| PspCI | CACGTG | 1 cut(s) | 246 |
| PspFI | CCCAGC | 1 cut(s) | 1427 |
| PspGI | CCWGG | 3 cut(s) | 474, 883, 1132 |
| PspN4I | GGNNCC | 2 cut(s) | 930, 1412 |
| PspPI | GGNCC | 3 cut(s) | 890, 920, 1367 |
| PspXI | VCTCGAGB | 1 cut(s) | 149 |
| PsuI | RGATCY | 1 cut(s) | 1341 |
| PsyI | GACNNNGTC | 1 cut(s) | 1310 |
| PvuI | CGATCG | 1 cut(s) | 1143 |
| RsaI | GTAC | 3 cut(s) | 299, 1010, 1293 |
| RsaNI | GTAC | 3 cut(s) | 298, 1009, 1292 |
| SaqAI | TTAA | 6 cut(s) | 273, 306, 908, 1095, 1173, 1464 |
| SatI | GCNGC | 5 cut(s) | 155, 376, 656, 1437, 1440 |
| Sau3AI | GATC | 7 cut(s) | 10, 190, 301, 1039, 1140, 1234, 1341 |
| Sau96I | GGNCC | 3 cut(s) | 890, 920, 1367 |
| SchI | GAGTC | 7 cut(s) | 464, 476, 694, 844, 1256, 1271, 1408 |
| ScrFI | CCNGG | 4 cut(s) | 318, 476, 885, 1134 |
| SexAI | ACCWGGT | 2 cut(s) | 883, 1132 |
| SfaNI | GCATC | 3 cut(s) | 711, 1036, 1044 |
| SfcI | CTRYAG | 2 cut(s) | 441, 558 |
| Sfr274I | CTCGAG | 1 cut(s) | 149 |
| SfuI | TTCGAA | 1 cut(s) | 1454 |
| SinI | GGWCC | 3 cut(s) | 890, 920, 1367 |
| SlaI | CTCGAG | 1 cut(s) | 149 |
| SmlI | CTYRAG | 3 cut(s) | 149, 749, 1058 |
| SmoI | CTYRAG | 3 cut(s) | 149, 749, 1058 |
| SnaBI | TACGTA | 1 cut(s) | 390 |
| Sse9I | AATT | 3 cut(s) | 915, 937, 1597 |
| SspMI | CTAG | 1 cut(s) | 92 |
| StyD4I | CCNGG | 4 cut(s) | 316, 474, 883, 1132 |
| StyI | CCWWGG | 1 cut(s) | 370 |
| TaaI | ACNGT | 6 cut(s) | 71, 217, 497, 559, 668, 1192 |
| TaiI | ACGT | 6 cut(s) | 248, 392, 999, 1271, 1353, 1397 |
| TaqII | GACCGA | 1 cut(s) | 1389 |
| TasI | AATT | 3 cut(s) | 915, 937, 1597 |
| TatI | WGTACW | 1 cut(s) | 1008 |
| TauI | GCSGC | 3 cut(s) | 378, 658, 1439 |
| Tru1I | TTAA | 6 cut(s) | 273, 306, 908, 1095, 1173, 1464 |
| Tru9I | TTAA | 6 cut(s) | 273, 306, 908, 1095, 1173, 1464 |
| TscAI | CASTG | 2 cut(s) | 1195, 1409 |
| TseFI | GTSAC | 2 cut(s) | 320, 1526 |
| TseI | GCWGC | 2 cut(s) | 154, 1439 |
| Tsp45I | GTSAC | 2 cut(s) | 320, 1526 |
| TspDTI | ATGAA | 7 cut(s) | 17, 68, 72, 803, 941, 969, 1404 |
| TspGWI | ACGGA | 2 cut(s) | 270, 666 |
| TspRI | CASTG | 2 cut(s) | 1195, 1409 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1310 |
| VpaK11BI | GGWCC | 3 cut(s) | 890, 920, 1367 |
| XceI | RCATGY | 1 cut(s) | 470 |
| XhoI | CTCGAG | 1 cut(s) | 149 |
| XmiI | GTMKAC | 1 cut(s) | 392 |
| XmnI | GAANNNNTTC | 3 cut(s) | 537, 792, 1415 |
| XspI | CTAG | 1 cut(s) | 92 |