Belongs to the GRAS family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14920 AT2G01570 |
| fragaria_vesca | FvH4_4g34110 |
| malus_domestica | MD13G1022100.v1.1 MD16G1023300.v1.1 |
| prunus_persica | Prupe.1G329600_v2.0.a1 |
| pyrus_communis | pycom13g02070 pycom16g02040 pycom16g02050 |
| rosa_chinensis | RchiOBHm_Chr4g0443621 |
| rosa_laevigata | RLG00000005909 |
| rosa_multiflora | Rmu_sc0001118.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00384170 |
| rosa_samantha | Rh4AG403600 Rh4AG405600 Rh4BG416600 Rh4CG431100 Rh4DG412200 |
| rosa_wichuraiana | Rw4G034820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 68, 986 |
| AccB1I | GGYRCC | 1 cut(s) | 349 |
| AccI | GTMKAC | 3 cut(s) | 284, 723, 915 |
| AccII | CGCG | 3 cut(s) | 111, 493, 1139 |
| AclWI | GGATC | 2 cut(s) | 285, 911 |
| AcoI | YGGCCR | 4 cut(s) | 171, 414, 1091, 1307 |
| AcsI | RAATTY | 4 cut(s) | 328, 793, 992, 1241 |
| AcuI | CTGAAG | 2 cut(s) | 606, 1175 |
| AcyI | GRCGYC | 3 cut(s) | 248, 350, 741 |
| AfaI | GTAC | 2 cut(s) | 1250, 1568 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 52, 343, 505, 808, 1192 |
| AgeI | ACCGGT | 1 cut(s) | 1476 |
| AgsI | TTSAA | 4 cut(s) | 203, 1037, 1483, 1588 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 514 |
| AjnI | CCWGG | 4 cut(s) | 544, 813, 1470, 1542 |
| Alw21I | GWGCWC | 2 cut(s) | 534, 1305 |
| Alw26I | GTCTC | 5 cut(s) | 666, 682, 968, 1626, 1650 |
| AlwI | GGATC | 2 cut(s) | 285, 911 |
| ApeKI | GCWGC | 2 cut(s) | 106, 1492 |
| ApoI | RAATTY | 4 cut(s) | 328, 793, 992, 1241 |
| AsiGI | ACCGGT | 1 cut(s) | 1476 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1032, 1230 |
| AspLEI | GCGC | 5 cut(s) | 111, 352, 773, 789, 857 |
| AsuC2I | CCSGG | 4 cut(s) | 338, 710, 1125, 1374 |
| AsuHPI | GGTGA | 5 cut(s) | 166, 359, 811, 1345, 1414 |
| AsuNHI | GCTAGC | 1 cut(s) | 1219 |
| AvaII | GGWCC | 3 cut(s) | 1183, 1460, 1474 |
| BanI | GGYRCC | 1 cut(s) | 349 |
| BanII | GRGCYC | 4 cut(s) | 237, 534, 1305, 1532 |
| BbsI | GAAGAC | 4 cut(s) | 153, 234, 510, 1336 |
| Bbv12I | GWGCWC | 2 cut(s) | 534, 1305 |
| BbvCI | CCTCAGC | 1 cut(s) | 921 |
| BbvI | GCAGC | 2 cut(s) | 118, 1479 |
| BccI | CCATC | 1 cut(s) | 1194 |
| BceAI | ACGGC | 5 cut(s) | 133, 617, 754, 764, 772 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 778, 812 |
| BciT130I | CCWGG | 4 cut(s) | 546, 815, 1472, 1544 |
| BciVI | GTATCC | 1 cut(s) | 247 |
| BclI | TGATCA | 1 cut(s) | 1612 |
| BcnI | CCSGG | 4 cut(s) | 338, 710, 1125, 1374 |
| BcoDI | GTCTC | 5 cut(s) | 666, 682, 968, 1626, 1650 |
| BfaI | CTAG | 3 cut(s) | 893, 1220, 1283 |
| BfoI | RGCGCY | 2 cut(s) | 353, 858 |
| BfuAI | ACCTGC | 2 cut(s) | 68, 986 |
| BfuI | GTATCC | 1 cut(s) | 247 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 179, 601 |
| BisI | GCNGC | 7 cut(s) | 87, 107, 348, 359, 1129, 1170, 1493 |
| BlsI | GCNGC | 7 cut(s) | 88, 108, 349, 360, 1130, 1171, 1494 |
| Bme1390I | CCNGG | 8 cut(s) | 338, 546, 710, 815, 1125, 1374, 1472, 1544 |
| Bme18I | GGWCC | 3 cut(s) | 1183, 1460, 1474 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 514 |
| BmiI | GGNNCC | 3 cut(s) | 351, 411, 1678 |
| BmrFI | CCNGG | 8 cut(s) | 338, 546, 710, 815, 1125, 1374, 1472, 1544 |
| BmrI | ACTGGG | 2 cut(s) | 493, 565 |
| BmsI | GCATC | 5 cut(s) | 942, 951, 1074, 1276, 1607 |
| BmtI | GCTAGC | 1 cut(s) | 1223 |
| BmuI | ACTGGG | 2 cut(s) | 493, 565 |
| BpiI | GAAGAC | 4 cut(s) | 153, 234, 510, 1336 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 497, 529 |
| BpmI | CTGGAG | 4 cut(s) | 314, 941, 1319, 1544 |
| Bpu10I | CCTNAGC | 2 cut(s) | 807, 921 |
| BpuEI | CTTGAG | 1 cut(s) | 518 |
| BpuMI | CCSGG | 4 cut(s) | 338, 710, 1125, 1374 |
| Bsa29I | ATCGAT | 2 cut(s) | 441, 1062 |
| BsaHI | GRCGYC | 3 cut(s) | 248, 350, 741 |
| BsaI | GGTCTC | 1 cut(s) | 968 |
| BsaJI | CCNNGG | 6 cut(s) | 51, 273, 754, 813, 885, 1398 |
| BsaWI | WCCGGW | 3 cut(s) | 1151, 1462, 1476 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 221, 251, 307, 337, 929, 959 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 52, 343, 505, 808, 1192 |
| Bse118I | RCCGGY | 3 cut(s) | 851, 1093, 1476 |
| Bse1I | ACTGG | 2 cut(s) | 499, 571 |
| Bse3DI | GCAATG | 1 cut(s) | 1094 |
| BseBI | CCWGG | 4 cut(s) | 546, 815, 1472, 1544 |
| BseCI | ATCGAT | 2 cut(s) | 441, 1062 |
| BseDI | CCNNGG | 6 cut(s) | 51, 273, 754, 813, 885, 1398 |
| BseGI | GGATG | 4 cut(s) | 62, 130, 1089, 1615 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 52, 343, 505, 808, 1192 |
| BseMI | GCAATG | 1 cut(s) | 1094 |
| BseMII | CTCAG | 2 cut(s) | 499, 935 |
| BseNI | ACTGG | 2 cut(s) | 499, 571 |
| BseRI | GAGGAG | 3 cut(s) | 1627, 1638, 1641 |
| BseX3I | CGGCCG | 2 cut(s) | 414, 1307 |
| BseXI | GCAGC | 2 cut(s) | 118, 1479 |
| BseYI | CCCAGC | 4 cut(s) | 142, 240, 897, 1215 |
| BsgI | GTGCAG | 1 cut(s) | 1478 |
| Bsh1236I | CGCG | 3 cut(s) | 111, 493, 1139 |
| Bsh1285I | CGRYCG | 4 cut(s) | 417, 933, 1310, 1383 |
| BshNI | GGYRCC | 1 cut(s) | 349 |
| BshTI | ACCGGT | 1 cut(s) | 1476 |
| BshVI | ATCGAT | 2 cut(s) | 441, 1062 |
| BsiEI | CGRYCG | 4 cut(s) | 417, 933, 1310, 1383 |
| BsiHKAI | GWGCWC | 2 cut(s) | 534, 1305 |
| BslFI | GGGAC | 1 cut(s) | 229 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 52, 343, 505, 808, 1192 |
| BsmAI | GTCTC | 5 cut(s) | 666, 682, 968, 1626, 1650 |
| BsmBI | CGTCTC | 3 cut(s) | 666, 682, 1650 |
| BsmFI | GGGAC | 1 cut(s) | 229 |
| Bso31I | GGTCTC | 1 cut(s) | 968 |
| Bsp1286I | GDGCHC | 4 cut(s) | 237, 534, 1305, 1532 |
| Bsp143I | GATC | 8 cut(s) | 277, 451, 825, 903, 930, 1279, 1380, 1612 |
| Bsp19I | CCATGG | 1 cut(s) | 51 |
| BspCNI | CTCAG | 2 cut(s) | 498, 934 |
| BspDI | ATCGAT | 2 cut(s) | 441, 1062 |
| BspFNI | CGCG | 3 cut(s) | 111, 493, 1139 |
| BspHI | TCATGA | 1 cut(s) | 1615 |
| BspLI | GGNNCC | 3 cut(s) | 351, 411, 1678 |
| BspMI | ACCTGC | 2 cut(s) | 68, 986 |
| BspOI | GCTAGC | 1 cut(s) | 1223 |
| BspPI | GGATC | 2 cut(s) | 285, 911 |
| BspT107I | GGYRCC | 1 cut(s) | 349 |
| BspTNI | GGTCTC | 1 cut(s) | 968 |
| BsrDI | GCAATG | 1 cut(s) | 1094 |
| BsrFI | RCCGGY | 3 cut(s) | 851, 1093, 1476 |
| BsrI | ACTGG | 2 cut(s) | 499, 571 |
| BssAI | RCCGGY | 3 cut(s) | 851, 1093, 1476 |
| BssECI | CCNNGG | 6 cut(s) | 51, 273, 754, 813, 885, 1398 |
| BssMI | GATC | 8 cut(s) | 277, 451, 825, 903, 930, 1279, 1380, 1612 |
| BssNI | GRCGYC | 3 cut(s) | 248, 350, 741 |
| BssT1I | CCWWGG | 1 cut(s) | 51 |
| Bst2UI | CCWGG | 4 cut(s) | 546, 815, 1472, 1544 |
| Bst4CI | ACNGT | 4 cut(s) | 220, 259, 1432, 1460 |
| Bst6I | CTCTTC | 1 cut(s) | 198 |
| BstACI | GRCGYC | 3 cut(s) | 248, 350, 741 |
| BstDEI | CTNAG | 3 cut(s) | 485, 807, 921 |
| BstDSI | CCRYGG | 3 cut(s) | 51, 754, 1398 |
| BstEII | GGTNACC | 1 cut(s) | 817 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 806 |
| BstF5I | GGATG | 4 cut(s) | 62, 130, 1089, 1615 |
| BstFNI | CGCG | 3 cut(s) | 111, 493, 1139 |
| BstH2I | RGCGCY | 2 cut(s) | 353, 858 |
| BstHHI | GCGC | 5 cut(s) | 111, 352, 773, 789, 857 |
| BstKTI | GATC | 8 cut(s) | 280, 454, 828, 906, 933, 1282, 1383, 1615 |
| BstMAI | GTCTC | 5 cut(s) | 666, 682, 968, 1626, 1650 |
| BstMBI | GATC | 8 cut(s) | 277, 451, 825, 903, 930, 1279, 1380, 1612 |
| BstMCI | CGRYCG | 4 cut(s) | 417, 933, 1310, 1383 |
| BstNI | CCWGG | 4 cut(s) | 546, 815, 1472, 1544 |
| BstPI | GGTNACC | 1 cut(s) | 817 |
| BstSCI | CCNGG | 8 cut(s) | 336, 544, 708, 813, 1123, 1372, 1470, 1542 |
| BstUI | CGCG | 3 cut(s) | 111, 493, 1139 |
| BstV1I | GCAGC | 2 cut(s) | 118, 1479 |
| BstV2I | GAAGAC | 4 cut(s) | 153, 234, 510, 1336 |
| BstX2I | RGATCY | 2 cut(s) | 277, 903 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1237 |
| BstYI | RGATCY | 2 cut(s) | 277, 903 |
| BstZI | CGGCCG | 2 cut(s) | 414, 1307 |
| Bsu15I | ATCGAT | 2 cut(s) | 441, 1062 |
| BsuI | GTATCC | 1 cut(s) | 247 |
| BsuTUI | ATCGAT | 2 cut(s) | 441, 1062 |
| BtgI | CCRYGG | 3 cut(s) | 51, 754, 1398 |
| BtsCI | GGATG | 4 cut(s) | 62, 130, 1089, 1615 |
| BveI | ACCTGC | 2 cut(s) | 68, 986 |
| CciI | TCATGA | 1 cut(s) | 1615 |
| CfoI | GCGC | 5 cut(s) | 111, 352, 773, 789, 857 |
| Cfr10I | RCCGGY | 3 cut(s) | 851, 1093, 1476 |
| ClaI | ATCGAT | 2 cut(s) | 441, 1062 |
| CpoI | CGGWCCG | 1 cut(s) | 1460 |
| CseI | GACGC | 3 cut(s) | 237, 730, 1632 |
| Csp6I | GTAC | 2 cut(s) | 1249, 1567 |
| CspAI | ACCGGT | 1 cut(s) | 1476 |
| CspI | CGGWCCG | 1 cut(s) | 1460 |
| CviQI | GTAC | 2 cut(s) | 1249, 1567 |
| DdeI | CTNAG | 3 cut(s) | 485, 807, 921 |
| DinI | GGCGCC | 1 cut(s) | 351 |
| DpnI | GATC | 8 cut(s) | 279, 453, 827, 905, 932, 1281, 1382, 1614 |
| DpnII | GATC | 8 cut(s) | 277, 451, 825, 903, 930, 1279, 1380, 1612 |
| DriI | GACNNNNNGTC | 1 cut(s) | 514 |
| EaeI | YGGCCR | 4 cut(s) | 171, 414, 1091, 1307 |
| EagI | CGGCCG | 2 cut(s) | 414, 1307 |
| Eam1104I | CTCTTC | 1 cut(s) | 198 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 514 |
| EarI | CTCTTC | 1 cut(s) | 198 |
| EciI | GGCGGA | 1 cut(s) | 309 |
| Ecl136II | GAGCTC | 2 cut(s) | 532, 1303 |
| EclXI | CGGCCG | 2 cut(s) | 414, 1307 |
| Eco130I | CCWWGG | 1 cut(s) | 51 |
| Eco24I | GRGCYC | 4 cut(s) | 237, 534, 1305, 1532 |
| Eco31I | GGTCTC | 1 cut(s) | 968 |
| Eco47I | GGWCC | 3 cut(s) | 1183, 1460, 1474 |
| Eco52I | CGGCCG | 2 cut(s) | 414, 1307 |
| Eco53kI | GAGCTC | 2 cut(s) | 532, 1303 |
| Eco57I | CTGAAG | 2 cut(s) | 606, 1175 |
| Eco91I | GGTNACC | 1 cut(s) | 817 |
| EcoICRI | GAGCTC | 2 cut(s) | 532, 1303 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 806 |
| EcoO109I | RGGNCCY | 2 cut(s) | 811, 1108 |
| EcoO65I | GGTNACC | 1 cut(s) | 817 |
| EcoRII | CCWGG | 4 cut(s) | 544, 813, 1470, 1542 |
| EcoT14I | CCWWGG | 1 cut(s) | 51 |
| EcoT38I | GRGCYC | 4 cut(s) | 237, 534, 1305, 1532 |
| EgeI | GGCGCC | 1 cut(s) | 351 |
| EheI | GGCGCC | 1 cut(s) | 351 |
| ErhI | CCWWGG | 1 cut(s) | 51 |
| Esp3I | CGTCTC | 3 cut(s) | 666, 682, 1650 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1568, 1600 |
| FaqI | GGGAC | 1 cut(s) | 229 |
| FauI | CCCGC | 4 cut(s) | 498, 1144, 1170, 1174 |
| FbaI | TGATCA | 1 cut(s) | 1612 |
| FblI | GTMKAC | 3 cut(s) | 284, 723, 915 |
| Fnu4HI | GCNGC | 7 cut(s) | 87, 107, 348, 359, 1129, 1170, 1493 |
| FokI | GGATG | 4 cut(s) | 49, 137, 1096, 1622 |
| FriOI | GRGCYC | 4 cut(s) | 237, 534, 1305, 1532 |
| Fsp4HI | GCNGC | 7 cut(s) | 87, 107, 348, 359, 1129, 1170, 1493 |
| FspBI | CTAG | 3 cut(s) | 893, 1220, 1283 |
| GlaI | GCGC | 5 cut(s) | 110, 351, 772, 788, 856 |
| GluI | GCNGC | 7 cut(s) | 87, 107, 348, 359, 1129, 1170, 1493 |
| GsaI | CCCAGC | 4 cut(s) | 146, 244, 901, 1219 |
| GsuI | CTGGAG | 4 cut(s) | 314, 941, 1319, 1544 |
| HaeII | RGCGCY | 2 cut(s) | 353, 858 |
| HgaI | GACGC | 3 cut(s) | 237, 730, 1632 |
| HhaI | GCGC | 5 cut(s) | 111, 352, 773, 789, 857 |
| Hin1I | GRCGYC | 3 cut(s) | 248, 350, 741 |
| Hin6I | GCGC | 5 cut(s) | 109, 350, 771, 787, 855 |
| HinP1I | GCGC | 5 cut(s) | 109, 350, 771, 787, 855 |
| HincII | GTYRAC | 4 cut(s) | 285, 702, 724, 1537 |
| HindII | GTYRAC | 4 cut(s) | 285, 702, 724, 1537 |
| HphI | GGTGA | 5 cut(s) | 166, 359, 811, 1345, 1414 |
| Hpy166II | GTNNAC | 8 cut(s) | 285, 702, 724, 754, 916, 1336, 1537, 1567 |
| Hpy188III | TCNNGA | 8 cut(s) | 224, 958, 1025, 1037, 1193, 1283, 1616, 1629 |
| Hpy8I | GTNNAC | 8 cut(s) | 285, 702, 724, 754, 916, 1336, 1537, 1567 |
| Hpy99I | CGWCG | 4 cut(s) | 116, 119, 253, 677 |
| HpyAV | CCTTC | 4 cut(s) | 57, 621, 886, 1022 |
| HpyCH4III | ACNGT | 4 cut(s) | 220, 259, 1432, 1460 |
| HpyCH4V | TGCA | 4 cut(s) | 964, 1087, 1105, 1495 |
| HpyF3I | CTNAG | 3 cut(s) | 485, 807, 921 |
| Hsp92I | GRCGYC | 3 cut(s) | 248, 350, 741 |
| HspAI | GCGC | 5 cut(s) | 109, 350, 771, 787, 855 |
| KasI | GGCGCC | 1 cut(s) | 349 |
| KroI | GCCGGC | 2 cut(s) | 851, 1093 |
| KroNI | GCCGGC | 2 cut(s) | 853, 1095 |
| Ksp22I | TGATCA | 1 cut(s) | 1612 |
| Kzo9I | GATC | 8 cut(s) | 277, 451, 825, 903, 930, 1279, 1380, 1612 |
| LmnI | GCTCC | 5 cut(s) | 415, 960, 1300, 1308, 1438 |
| Lsp1109I | GCAGC | 2 cut(s) | 118, 1479 |
| LweI | GCATC | 5 cut(s) | 942, 951, 1074, 1276, 1607 |
| MaeI | CTAG | 3 cut(s) | 893, 1220, 1283 |
| MaeIII | GTNAC | 2 cut(s) | 817, 1426 |
| MalI | GATC | 8 cut(s) | 279, 453, 827, 905, 932, 1281, 1382, 1614 |
| MboI | GATC | 8 cut(s) | 277, 451, 825, 903, 930, 1279, 1380, 1612 |
| MflI | RGATCY | 2 cut(s) | 277, 903 |
| MhlI | GDGCHC | 4 cut(s) | 237, 534, 1305, 1532 |
| MluCI | AATT | 5 cut(s) | 328, 523, 793, 992, 1241 |
| Mly113I | GGCGCC | 1 cut(s) | 350 |
| MmeI | TCCRAC | 6 cut(s) | 189, 231, 555, 691, 1144, 1539 |
| MroNI | GCCGGC | 2 cut(s) | 851, 1093 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1032, 1230 |
| MseI | TTAA | 1 cut(s) | 1148 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1235 |
| MspA1I | CMGCKG | 4 cut(s) | 244, 361, 901, 1172 |
| MspR9I | CCNGG | 8 cut(s) | 338, 546, 710, 815, 1125, 1374, 1472, 1544 |
| MvaI | CCWGG | 4 cut(s) | 546, 815, 1472, 1544 |
| MvnI | CGCG | 3 cut(s) | 111, 493, 1139 |
| NaeI | GCCGGC | 2 cut(s) | 853, 1095 |
| NarI | GGCGCC | 1 cut(s) | 350 |
| NciI | CCSGG | 4 cut(s) | 338, 710, 1125, 1374 |
| NcoI | CCATGG | 1 cut(s) | 51 |
| NdeII | GATC | 8 cut(s) | 277, 451, 825, 903, 930, 1279, 1380, 1612 |
| NgoMIV | GCCGGC | 2 cut(s) | 851, 1093 |
| NheI | GCTAGC | 1 cut(s) | 1219 |
| NlaIV | GGNNCC | 3 cut(s) | 351, 411, 1678 |
| NmeAIII | GCCGAG | 4 cut(s) | 442, 910, 1335, 1348 |
| NmuCI | GTSAC | 2 cut(s) | 817, 1426 |
| PagI | TCATGA | 1 cut(s) | 1615 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 281, 447 |
| PdiI | GCCGGC | 2 cut(s) | 853, 1095 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1032, 1230 |
| PfeI | GAWTC | 5 cut(s) | 364, 398, 578, 1075, 1155 |
| PfoI | TCCNGGA | 1 cut(s) | 1470 |
| PinAI | ACCGGT | 1 cut(s) | 1476 |
| PkrI | GCNGC | 7 cut(s) | 88, 108, 349, 360, 1130, 1171, 1494 |
| Ple19I | CGATCG | 2 cut(s) | 933, 1383 |
| PluTI | GGCGCC | 1 cut(s) | 353 |
| Psp124BI | GAGCTC | 2 cut(s) | 534, 1305 |
| Psp6I | CCWGG | 4 cut(s) | 544, 813, 1470, 1542 |
| PspEI | GGTNACC | 1 cut(s) | 817 |
| PspFI | CCCAGC | 4 cut(s) | 142, 240, 897, 1215 |
| PspGI | CCWGG | 4 cut(s) | 544, 813, 1470, 1542 |
| PspN4I | GGNNCC | 3 cut(s) | 351, 411, 1678 |
| PsuI | RGATCY | 2 cut(s) | 277, 903 |
| PvuI | CGATCG | 2 cut(s) | 933, 1383 |
| PvuII | CAGCTG | 1 cut(s) | 244 |
| RsaI | GTAC | 2 cut(s) | 1250, 1568 |
| RsaNI | GTAC | 2 cut(s) | 1249, 1567 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1235 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1460 |
| RsrII | CGGWCCG | 1 cut(s) | 1460 |
| SacI | GAGCTC | 2 cut(s) | 534, 1305 |
| SalI | GTCGAC | 2 cut(s) | 283, 722 |
| SaqAI | TTAA | 1 cut(s) | 1148 |
| SatI | GCNGC | 7 cut(s) | 87, 107, 348, 359, 1129, 1170, 1493 |
| Sau3AI | GATC | 8 cut(s) | 277, 451, 825, 903, 930, 1279, 1380, 1612 |
| ScrFI | CCNGG | 8 cut(s) | 338, 546, 710, 815, 1125, 1374, 1472, 1544 |
| SduI | GDGCHC | 4 cut(s) | 237, 534, 1305, 1532 |
| SfaNI | GCATC | 5 cut(s) | 942, 951, 1074, 1276, 1607 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 179 |
| SfoI | GGCGCC | 1 cut(s) | 351 |
| SinI | GGWCC | 3 cut(s) | 1183, 1460, 1474 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1235 |
| SmlI | CTYRAG | 1 cut(s) | 533 |
| SmoI | CTYRAG | 1 cut(s) | 533 |
| Sse9I | AATT | 5 cut(s) | 328, 523, 793, 992, 1241 |
| SspDI | GGCGCC | 1 cut(s) | 349 |
| SspMI | CTAG | 3 cut(s) | 893, 1220, 1283 |
| SstI | GAGCTC | 2 cut(s) | 534, 1305 |
| StyD4I | CCNGG | 8 cut(s) | 336, 544, 708, 813, 1123, 1372, 1470, 1542 |
| StyI | CCWWGG | 1 cut(s) | 51 |
| TaaI | ACNGT | 4 cut(s) | 220, 259, 1432, 1460 |
| TaqII | GACCGA | 1 cut(s) | 1522 |
| TasI | AATT | 5 cut(s) | 328, 523, 793, 992, 1241 |
| TatI | WGTACW | 2 cut(s) | 1248, 1566 |
| TauI | GCSGC | 5 cut(s) | 89, 350, 361, 1131, 1172 |
| TfiI | GAWTC | 5 cut(s) | 364, 398, 578, 1075, 1155 |
| Tru1I | TTAA | 1 cut(s) | 1148 |
| Tru9I | TTAA | 1 cut(s) | 1148 |
| TseFI | GTSAC | 2 cut(s) | 817, 1426 |
| TseI | GCWGC | 2 cut(s) | 106, 1492 |
| Tsp45I | GTSAC | 2 cut(s) | 817, 1426 |
| TspDTI | ATGAA | 8 cut(s) | 17, 199, 251, 479, 1088, 1223, 1427, 1632 |
| TspGWI | ACGGA | 2 cut(s) | 1330, 1387 |
| VpaK11BI | GGWCC | 3 cut(s) | 1183, 1460, 1474 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 806 |
| XapI | RAATTY | 4 cut(s) | 328, 793, 992, 1241 |
| XbaI | TCTAGA | 1 cut(s) | 1282 |
| XmiI | GTMKAC | 3 cut(s) | 284, 723, 915 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1032, 1230 |
| XspI | CTAG | 3 cut(s) | 893, 1220, 1283 |