Rmu_sc0001118.1_g000014

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001118.1
OG0011800
Physical Location & Seq
Reverse (-)
98116 .. 99975
1860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001118.1_g000014.1.cds

Sequence Viewer

Length: 1860 bp
atgaaaagagaacatcacagccacccccaccaccaccaccctaatccaaacccttccatggcttccacatccaatgataaggcaggtaaggcggcgatgtgggaggactcgcagcgcgacgacggcatggatgagcttctggctgtgctgggctacaaggtgaagtcttccaacatggccgatgtggcccagaagctcgaacagcttgaagagttcatggggacagttcaggaagacgggctctcccagctggcgtcggatacggttcattacaatccctcggatctgtcgacttggctggagagcatgatttcggagataaccccgcctccgaatttcgacccggtaatggcggcgccaccgccgctgaatcacctcgctggaagctctgttgtgctggacgattcgtcgtttttggctccggccgagtcgtccaccattacctctatcgattttggcgatcaacaacacatgaacacgaacagcaaatctctcagcccgcgaacccagttcgaggactgctcgtcttccaattacgagctcaaggccatacctggaaaagccattttcagccagacccagttcgattcttccccaagggagccaaaacggctcaaaccttgttcttcttcagatttctactccaccaccaccaccaccaactcgtctctccaacccgtcgtctccctccccaacaacgagtcaactcgcccggtggtcgtggtcgactcgcaagagaacggcgtcagactcgtccacggcctcatggcctgcgccgaagccgtccagcgcaagaatttcgacctcgctaaggccctggtgacccagatcagctacttggcgatttcacaagccggcgctatgcgaaaagtcgccaccttcttcgccgaggctctagcccagcggatctggggggtctaccctcagccaccgatcgaccacacctactcggagatgctccagatgcacttctacgagacctgcccctacctcaaattcgcccatttcacagcaaatcaagccattctcgaaggctttcaagacaagaagcgagtccatgtcatcgatttctccatgaatcaggggatgcaatggccggctctcatgcaggccctcgctctccgacccgggggcccgcccgcgtttcgcttgaccggaatcggcccgccggccgcggataactcggaccatcttcaggaagtgggctggaagctggcccagctagccgaaaccattcatgtggaatttgagtacagaggctttgttgctaacagcttggctgatctagatgcttccatgctggagctccggccgagcgaggtcgagtctgtggccgtgaactccgtcttcgagcttcacaagctgttggctcggcccggtgcgatcgacaaagtgttgtccgtggtgaagcaaatgaagccggagattgtgacggttgtggagcaggaagcgaaccacaacggaccggttttcctggaccggttcaacgagtcgctgcactactactcgaccctgtttgactcgctggaggggtcggtcaacagccaggacaagatgatgtcggaggtgtacttggggaagcaaatcttcaatgtggtggcatgcgagggaccggaccgggtcgagcggcacgagacgctgtcgcagtggcggacccggttcgacgcttccggcttcgctccggttcatctcggttccaacgcgttcaagcaagccagcatgctcttggcgctcttcgccggcggagatgggtacagagtggaggagaacgacgggtgtttgatgttggggtggcacactcggccgctcatcgccacctcggcctggaaactcggctgctcccaatcggtgactcagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000910 GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006808 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0007049 GO:0007154 GO:0007165 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009739 GO:0009740 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009892 GO:0009893 GO:0009894 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010218 GO:0010232 GO:0010233 GO:0010453 GO:0010454 GO:0010468 GO:0010476 GO:0010556 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032501 GO:0032870 GO:0033206 GO:0033993 GO:0035690 GO:0040008 GO:0042176 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045595 GO:0045596 GO:0045926 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048638 GO:0048640 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051246 GO:0051252 GO:0051301 GO:0051321 GO:0051716 GO:0060255 GO:0061640 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071370 GO:0071395 GO:0071396 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900032 GO:1900033 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903046 GO:1903506 GO:1905613 GO:1905614 GO:1905622 GO:2000024 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
DELLA GRAS

Protein Analysis

619

Amino Acids

68.44

Weight (kDa)

5.38

Isoelectric Point (pI)

42.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011800)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14920 AT2G01570
fragaria_vesca FvH4_4g34110
malus_domestica MD13G1022100.v1.1 MD16G1023300.v1.1
prunus_persica Prupe.1G329600_v2.0.a1
pyrus_communis pycom13g02070 pycom16g02040 pycom16g02050
rosa_chinensis RchiOBHm_Chr4g0443621
rosa_laevigata RLG00000005909
rosa_multiflora Rmu_sc0001118.1_g000014
rosa_roxburghii Rroxscaffold_5G00384170
rosa_samantha Rh4AG403600 Rh4AG405600 Rh4BG416600 Rh4CG431100 Rh4DG412200
rosa_wichuraiana Rw4G034820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 74, 989
AccB1I GGYRCC 1 cut(s) 355
AccBSI CCGCTC 2 cut(s) 1627, 1807
AccI GTMKAC 3 cut(s) 290, 726, 918
AccII CGCG 5 cut(s) 117, 502, 1142, 1175, 1703
AclWI GGATC 2 cut(s) 291, 914
AcoI YGGCCR 7 cut(s) 177, 423, 1094, 1170, 1310, 1332, 1802
AcsI RAATTY 4 cut(s) 334, 796, 995, 1244
AcuI CTGAAG 2 cut(s) 615, 1178
AcyI GRCGYC 3 cut(s) 254, 356, 744
AfaI GTAC 3 cut(s) 1253, 1571, 1754
AfiI CCNNNNNNNGG 7 cut(s) 58, 349, 514, 811, 1129, 1195, 1824
AflIII ACRYGT 1 cut(s) 1701
AgeI ACCGGT 2 cut(s) 1465, 1479
AgsI TTSAA 5 cut(s) 209, 1040, 1486, 1591, 1708
AhdI GACNNNNNGTC 2 cut(s) 406, 523
AjnI CCWGG 5 cut(s) 553, 816, 1473, 1545, 1823
Alw21I GWGCWC 2 cut(s) 543, 1308
Alw26I GTCTC 4 cut(s) 672, 688, 971, 1628
AlwI GGATC 2 cut(s) 291, 914
Ama87I CYCGRG 1 cut(s) 1127
ApaI GGGCCC 1 cut(s) 1136
ApeKI GCWGC 3 cut(s) 112, 1495, 1836
ApoI RAATTY 4 cut(s) 334, 796, 995, 1244
AsiGI ACCGGT 2 cut(s) 1465, 1479
Asp700I GAANNNNTTC 2 cut(s) 1035, 1233
AspLEI GCGC 6 cut(s) 117, 358, 776, 792, 860, 1732
AsuC2I CCSGG 7 cut(s) 344, 713, 1128, 1129, 1377, 1619, 1657
AsuHPI GGTGA 4 cut(s) 172, 365, 832, 1417
AsuNHI GCTAGC 1 cut(s) 1222
AvaI CYCGRG 1 cut(s) 1127
AvaII GGWCC 6 cut(s) 1186, 1463, 1477, 1610, 1615, 1653
BaeGI GKGCMC 1 cut(s) 1136
BanI GGYRCC 1 cut(s) 355
BanII GRGCYC 4 cut(s) 243, 543, 1136, 1308
BauI CACGAG 1 cut(s) 1631
BbsI GAAGAC 4 cut(s) 159, 240, 519, 1339
Bbv12I GWGCWC 2 cut(s) 543, 1308
BbvCI CCTCAGC 1 cut(s) 924
BbvI GCAGC 3 cut(s) 124, 1482, 1823
BccI CCATC 2 cut(s) 1197, 1742
BceAI ACGGC 6 cut(s) 139, 626, 757, 767, 775, 1319
BcgI CGANNNNNNTGC 2 cut(s) 781, 815
BciT130I CCWGG 5 cut(s) 555, 818, 1475, 1547, 1825
BciVI GTATCC 1 cut(s) 253
BcnI CCSGG 7 cut(s) 344, 713, 1128, 1129, 1377, 1619, 1657
BcoDI GTCTC 4 cut(s) 672, 688, 971, 1628
BfaI CTAG 3 cut(s) 896, 1223, 1286
BfoI RGCGCY 3 cut(s) 359, 861, 1733
BfuAI ACCTGC 2 cut(s) 74, 989
BfuI GTATCC 1 cut(s) 253
BglI GCCNNNNNGGC 3 cut(s) 185, 610, 1820
BisI GCNGC 9 cut(s) 93, 113, 354, 365, 1173, 1496, 1628, 1805, 1837
BlsI GCNGC 9 cut(s) 94, 114, 355, 366, 1174, 1497, 1629, 1806, 1838
Bme18I GGWCC 6 cut(s) 1186, 1463, 1477, 1610, 1615, 1653
BmeRI GACNNNNNGTC 2 cut(s) 406, 523
BmeT110I CYCGRG 1 cut(s) 1127
BmiI GGNNCC 8 cut(s) 357, 420, 603, 1133, 1134, 1611, 1655, 1696
BmrI ACTGGG 2 cut(s) 502, 574
BmsI GCATC 4 cut(s) 945, 954, 1077, 1279
BmtI GCTAGC 1 cut(s) 1226
BmuI ACTGGG 2 cut(s) 502, 574
BpiI GAAGAC 4 cut(s) 159, 240, 519, 1339
BplI GAGNNNNNCTC 2 cut(s) 506, 538
BpmI CTGGAG 4 cut(s) 320, 944, 1322, 1547
Bpu10I CCTNAGC 2 cut(s) 810, 924
BpuEI CTTGAG 1 cut(s) 527
BpuMI CCSGG 7 cut(s) 344, 713, 1128, 1129, 1377, 1619, 1657
Bsa29I ATCGAT 2 cut(s) 450, 1065
BsaHI GRCGYC 3 cut(s) 254, 356, 744
BsaI GGTCTC 1 cut(s) 971
BsaWI WCCGGW 5 cut(s) 1154, 1465, 1479, 1612, 1681
BsaXI ACNNNNNCTCC 4 cut(s) 227, 257, 313, 343
Bsc4I CCNNNNNNNGG 7 cut(s) 58, 349, 514, 811, 1129, 1195, 1824
Bse118I RCCGGY 6 cut(s) 854, 1096, 1168, 1465, 1479, 1739
Bse1I ACTGG 2 cut(s) 508, 580
Bse3DI GCAATG 1 cut(s) 1097
BseBI CCWGG 5 cut(s) 555, 818, 1475, 1547, 1825
BseCI ATCGAT 2 cut(s) 450, 1065
BseGI GGATG 3 cut(s) 68, 136, 1092
BseLI CCNNNNNNNGG 7 cut(s) 58, 349, 514, 811, 1129, 1195, 1824
BseMI GCAATG 1 cut(s) 1097
BseMII CTCAG 2 cut(s) 508, 938
BseNI ACTGG 2 cut(s) 508, 580
BseRI GAGGAG 1 cut(s) 1778
BseSI GKGCMC 1 cut(s) 1136
BseX3I CGGCCG 4 cut(s) 423, 1170, 1310, 1802
BseXI GCAGC 3 cut(s) 124, 1482, 1823
BseYI CCCAGC 4 cut(s) 148, 246, 900, 1218
BsgI GTGCAG 1 cut(s) 1481
Bsh1236I CGCG 5 cut(s) 117, 502, 1142, 1175, 1703
Bsh1285I CGRYCG 6 cut(s) 426, 936, 1173, 1313, 1386, 1805
BshNI GGYRCC 1 cut(s) 355
BshTI ACCGGT 2 cut(s) 1465, 1479
BshVI ATCGAT 2 cut(s) 450, 1065
BsiEI CGRYCG 6 cut(s) 426, 936, 1173, 1313, 1386, 1805
BsiHKAI GWGCWC 2 cut(s) 543, 1308
BsiHKCI CYCGRG 1 cut(s) 1127
BslFI GGGAC 2 cut(s) 235, 1623
BslI CCNNNNNNNGG 7 cut(s) 58, 349, 514, 811, 1129, 1195, 1824
BsmAI GTCTC 4 cut(s) 672, 688, 971, 1628
BsmBI CGTCTC 3 cut(s) 672, 688, 1628
BsmFI GGGAC 2 cut(s) 235, 1623
Bso31I GGTCTC 1 cut(s) 971
BsoBI CYCGRG 1 cut(s) 1127
Bsp120I GGGCCC 1 cut(s) 1132
Bsp1286I GDGCHC 4 cut(s) 243, 543, 1136, 1308
Bsp143I GATC 7 cut(s) 283, 460, 828, 906, 933, 1282, 1383
Bsp19I CCATGG 1 cut(s) 57
BspCNI CTCAG 2 cut(s) 507, 937
BspDI ATCGAT 2 cut(s) 450, 1065
BspFNI CGCG 5 cut(s) 117, 502, 1142, 1175, 1703
BspLI GGNNCC 8 cut(s) 357, 420, 603, 1133, 1134, 1611, 1655, 1696
BspMI ACCTGC 2 cut(s) 74, 989
BspOI GCTAGC 1 cut(s) 1226
BspPI GGATC 2 cut(s) 291, 914
BspQI GCTCTTC 1 cut(s) 1739
BspT107I GGYRCC 1 cut(s) 355
BspTNI GGTCTC 1 cut(s) 971
BsrBI CCGCTC 2 cut(s) 1627, 1807
BsrDI GCAATG 1 cut(s) 1097
BsrFI RCCGGY 6 cut(s) 854, 1096, 1168, 1465, 1479, 1739
BsrI ACTGG 2 cut(s) 508, 580
BssAI RCCGGY 6 cut(s) 854, 1096, 1168, 1465, 1479, 1739
BssMI GATC 7 cut(s) 283, 460, 828, 906, 933, 1282, 1383
BssNI GRCGYC 3 cut(s) 254, 356, 744
BssSI CACGAG 1 cut(s) 1631
BssT1I CCWWGG 2 cut(s) 57, 596
Bst2BI CACGAG 1 cut(s) 1631
Bst2UI CCWGG 5 cut(s) 555, 818, 1475, 1547, 1825
Bst4CI ACNGT 3 cut(s) 226, 265, 1435
Bst6I CTCTTC 2 cut(s) 204, 1739
BstACI GRCGYC 3 cut(s) 254, 356, 744
BstDEI CTNAG 4 cut(s) 494, 810, 924, 1854
BstDSI CCRYGG 4 cut(s) 57, 757, 1173, 1401
BstEII GGTNACC 1 cut(s) 820
BstENI CCTNNNNNAGG 1 cut(s) 809
BstF5I GGATG 3 cut(s) 68, 136, 1092
BstFNI CGCG 5 cut(s) 117, 502, 1142, 1175, 1703
BstH2I RGCGCY 3 cut(s) 359, 861, 1733
BstHHI GCGC 6 cut(s) 117, 358, 776, 792, 860, 1732
BstKTI GATC 7 cut(s) 286, 463, 831, 909, 936, 1285, 1386
BstMAI GTCTC 4 cut(s) 672, 688, 971, 1628
BstMBI GATC 7 cut(s) 283, 460, 828, 906, 933, 1282, 1383
BstMCI CGRYCG 6 cut(s) 426, 936, 1173, 1313, 1386, 1805
BstNI CCWGG 5 cut(s) 555, 818, 1475, 1547, 1825
BstNSI RCATGY 2 cut(s) 1605, 1723
BstPI GGTNACC 1 cut(s) 820
BstSLI GKGCMC 1 cut(s) 1136
BstUI CGCG 5 cut(s) 117, 502, 1142, 1175, 1703
BstV1I GCAGC 3 cut(s) 124, 1482, 1823
BstV2I GAAGAC 4 cut(s) 159, 240, 519, 1339
BstX2I RGATCY 2 cut(s) 283, 906
BstXI CCANNNNNNTGG 1 cut(s) 1240
BstYI RGATCY 2 cut(s) 283, 906
BstZI CGGCCG 4 cut(s) 423, 1170, 1310, 1802
Bsu15I ATCGAT 2 cut(s) 450, 1065
BsuI GTATCC 1 cut(s) 253
BsuTUI ATCGAT 2 cut(s) 450, 1065
BtgI CCRYGG 4 cut(s) 57, 757, 1173, 1401
BtgZI GCGATG 2 cut(s) 110, 1795
BtsCI GGATG 3 cut(s) 68, 136, 1092
BtsI GCAGTG 1 cut(s) 1652
BtsIMutI CAGTG 1 cut(s) 1652
BveI ACCTGC 2 cut(s) 74, 989
CfoI GCGC 6 cut(s) 117, 358, 776, 792, 860, 1732
Cfr10I RCCGGY 6 cut(s) 854, 1096, 1168, 1465, 1479, 1739
Cfr42I CCGCGG 1 cut(s) 1176
Cfr9I CCCGGG 1 cut(s) 1127
ClaI ATCGAT 2 cut(s) 450, 1065
CpoI CGGWCCG 2 cut(s) 1463, 1615
CseI GACGC 4 cut(s) 243, 733, 1645, 1673
Csp6I GTAC 3 cut(s) 1252, 1570, 1753
CspAI ACCGGT 2 cut(s) 1465, 1479
CspI CGGWCCG 2 cut(s) 1463, 1615
CviQI GTAC 3 cut(s) 1252, 1570, 1753
DdeI CTNAG 4 cut(s) 494, 810, 924, 1854
DinI GGCGCC 1 cut(s) 357
DpnI GATC 7 cut(s) 285, 462, 830, 908, 935, 1284, 1385
DpnII GATC 7 cut(s) 283, 460, 828, 906, 933, 1282, 1383
DriI GACNNNNNGTC 2 cut(s) 406, 523
EaeI YGGCCR 7 cut(s) 177, 423, 1094, 1170, 1310, 1332, 1802
EagI CGGCCG 4 cut(s) 423, 1170, 1310, 1802
Eam1104I CTCTTC 2 cut(s) 204, 1739
Eam1105I GACNNNNNGTC 2 cut(s) 406, 523
EarI CTCTTC 2 cut(s) 204, 1739
EciI GGCGGA 2 cut(s) 1666, 1758
Ecl136II GAGCTC 2 cut(s) 541, 1306
EclXI CGGCCG 4 cut(s) 423, 1170, 1310, 1802
Eco130I CCWWGG 2 cut(s) 57, 596
Eco24I GRGCYC 4 cut(s) 243, 543, 1136, 1308
Eco31I GGTCTC 1 cut(s) 971
Eco47I GGWCC 6 cut(s) 1186, 1463, 1477, 1610, 1615, 1653
Eco52I CGGCCG 4 cut(s) 423, 1170, 1310, 1802
Eco53kI GAGCTC 2 cut(s) 541, 1306
Eco57I CTGAAG 2 cut(s) 615, 1178
Eco88I CYCGRG 1 cut(s) 1127
Eco91I GGTNACC 1 cut(s) 820
EcoICRI GAGCTC 2 cut(s) 541, 1306
EcoNI CCTNNNNNAGG 1 cut(s) 809
EcoO109I RGGNCCY 3 cut(s) 814, 1111, 1132
EcoO65I GGTNACC 1 cut(s) 820
EcoRII CCWGG 5 cut(s) 553, 816, 1473, 1545, 1823
EcoT14I CCWWGG 2 cut(s) 57, 596
EcoT38I GRGCYC 4 cut(s) 243, 543, 1136, 1308
EgeI GGCGCC 1 cut(s) 357
EheI GGCGCC 1 cut(s) 357
ErhI CCWWGG 2 cut(s) 57, 596
Esp3I CGTCTC 3 cut(s) 672, 688, 1628
FalI AAGNNNNNCTT 2 cut(s) 1571, 1603
FaqI GGGAC 2 cut(s) 235, 1623
FauI CCCGC 5 cut(s) 333, 507, 1143, 1147, 1173
FblI GTMKAC 3 cut(s) 290, 726, 918
Fnu4HI GCNGC 9 cut(s) 93, 113, 354, 365, 1173, 1496, 1628, 1805, 1837
FokI GGATG 3 cut(s) 55, 143, 1099
FriOI GRGCYC 4 cut(s) 243, 543, 1136, 1308
Fsp4HI GCNGC 9 cut(s) 93, 113, 354, 365, 1173, 1496, 1628, 1805, 1837
FspBI CTAG 3 cut(s) 896, 1223, 1286
GlaI GCGC 6 cut(s) 116, 357, 775, 791, 859, 1731
GluI GCNGC 9 cut(s) 93, 113, 354, 365, 1173, 1496, 1628, 1805, 1837
GsaI CCCAGC 4 cut(s) 152, 250, 904, 1222
GsuI CTGGAG 4 cut(s) 320, 944, 1322, 1547
HaeII RGCGCY 3 cut(s) 359, 861, 1733
HgaI GACGC 4 cut(s) 243, 733, 1645, 1673
HhaI GCGC 6 cut(s) 117, 358, 776, 792, 860, 1732
Hin1I GRCGYC 3 cut(s) 254, 356, 744
Hin6I GCGC 6 cut(s) 115, 356, 774, 790, 858, 1730
HinP1I GCGC 6 cut(s) 115, 356, 774, 790, 858, 1730
HincII GTYRAC 4 cut(s) 291, 705, 727, 1540
HindII GTYRAC 4 cut(s) 291, 705, 727, 1540
HphI GGTGA 4 cut(s) 172, 365, 832, 1417
Hpy166II GTNNAC 9 cut(s) 291, 435, 705, 727, 757, 919, 1339, 1540, 1570
Hpy188III TCNNGA 6 cut(s) 230, 961, 1028, 1040, 1196, 1286
Hpy8I GTNNAC 9 cut(s) 291, 435, 705, 727, 757, 919, 1339, 1540, 1570
Hpy99I CGWCG 7 cut(s) 122, 125, 259, 412, 683, 1667, 1775
HpyAV CCTTC 3 cut(s) 63, 889, 1025
HpyCH4III ACNGT 3 cut(s) 226, 265, 1435
HpyCH4V TGCA 4 cut(s) 967, 1090, 1108, 1498
HpyF3I CTNAG 4 cut(s) 494, 810, 924, 1854
Hsp92I GRCGYC 3 cut(s) 254, 356, 744
HspAI GCGC 6 cut(s) 115, 356, 774, 790, 858, 1730
KasI GGCGCC 1 cut(s) 355
KroI GCCGGC 4 cut(s) 854, 1096, 1168, 1739
KroNI GCCGGC 4 cut(s) 856, 1098, 1170, 1741
KspI CCGCGG 1 cut(s) 1176
Kzo9I GATC 7 cut(s) 283, 460, 828, 906, 933, 1282, 1383
LguI GCTCTTC 1 cut(s) 1739
LmnI GCTCC 8 cut(s) 424, 601, 963, 1303, 1311, 1441, 1684, 1844
Lsp1109I GCAGC 3 cut(s) 124, 1482, 1823
LweI GCATC 4 cut(s) 945, 954, 1077, 1279
MaeI CTAG 3 cut(s) 896, 1223, 1286
MaeIII GTNAC 3 cut(s) 820, 1429, 1849
MalI GATC 7 cut(s) 285, 462, 830, 908, 935, 1284, 1385
MbiI CCGCTC 2 cut(s) 1627, 1807
MboI GATC 7 cut(s) 283, 460, 828, 906, 933, 1282, 1383
MflI RGATCY 2 cut(s) 283, 906
MhlI GDGCHC 4 cut(s) 243, 543, 1136, 1308
MluCI AATT 5 cut(s) 334, 532, 796, 995, 1244
MluI ACGCGT 1 cut(s) 1701
Mly113I GGCGCC 1 cut(s) 356
MmeI TCCRAC 6 cut(s) 195, 237, 697, 1147, 1542, 1722
MreI CGCCGGCG 1 cut(s) 1739
MroNI GCCGGC 4 cut(s) 854, 1096, 1168, 1739
MroXI GAANNNNTTC 2 cut(s) 1035, 1233
MslI CAYNNNNRTG 1 cut(s) 1238
MspA1I CMGCKG 4 cut(s) 250, 367, 904, 1175
MvaI CCWGG 5 cut(s) 555, 818, 1475, 1547, 1825
MvnI CGCG 5 cut(s) 117, 502, 1142, 1175, 1703
NaeI GCCGGC 4 cut(s) 856, 1098, 1170, 1741
NarI GGCGCC 1 cut(s) 356
NciI CCSGG 7 cut(s) 344, 713, 1128, 1129, 1377, 1619, 1657
NcoI CCATGG 1 cut(s) 57
NdeII GATC 7 cut(s) 283, 460, 828, 906, 933, 1282, 1383
NgoMIV GCCGGC 4 cut(s) 854, 1096, 1168, 1739
NheI GCTAGC 1 cut(s) 1222
NlaIV GGNNCC 8 cut(s) 357, 420, 603, 1133, 1134, 1611, 1655, 1696
NmeAIII GCCGAG 7 cut(s) 451, 913, 1338, 1351, 1780, 1799, 1812
NmuCI GTSAC 3 cut(s) 820, 1429, 1849
NspI RCATGY 2 cut(s) 1605, 1723
PaeI GCATGC 2 cut(s) 1605, 1723
PciSI GCTCTTC 1 cut(s) 1739
PcsI WCGNNNNNNNCGW 3 cut(s) 287, 456, 1629
PdiI GCCGGC 4 cut(s) 856, 1098, 1170, 1741
PdmI GAANNNNTTC 2 cut(s) 1035, 1233
PfeI GAWTC 5 cut(s) 370, 404, 587, 1078, 1158
PflFI GACNNNGTC 2 cut(s) 1619, 1639
PfoI TCCNGGA 1 cut(s) 1473
PinAI ACCGGT 2 cut(s) 1465, 1479
PkrI GCNGC 9 cut(s) 94, 114, 355, 366, 1174, 1497, 1629, 1806, 1838
Ple19I CGATCG 2 cut(s) 936, 1386
PluTI GGCGCC 1 cut(s) 359
Psp124BI GAGCTC 2 cut(s) 543, 1308
Psp6I CCWGG 5 cut(s) 553, 816, 1473, 1545, 1823
PspEI GGTNACC 1 cut(s) 820
PspFI CCCAGC 4 cut(s) 148, 246, 900, 1218
PspGI CCWGG 5 cut(s) 553, 816, 1473, 1545, 1823
PspN4I GGNNCC 8 cut(s) 357, 420, 603, 1133, 1134, 1611, 1655, 1696
PspOMI GGGCCC 1 cut(s) 1132
PsuI RGATCY 2 cut(s) 283, 906
PsyI GACNNNGTC 2 cut(s) 1619, 1639
PvuI CGATCG 2 cut(s) 936, 1386
PvuII CAGCTG 1 cut(s) 250
RsaI GTAC 3 cut(s) 1253, 1571, 1754
RsaNI GTAC 3 cut(s) 1252, 1570, 1753
RseI CAYNNNNRTG 1 cut(s) 1238
Rsr2I CGGWCCG 2 cut(s) 1463, 1615
RsrII CGGWCCG 2 cut(s) 1463, 1615
SacI GAGCTC 2 cut(s) 543, 1308
SacII CCGCGG 1 cut(s) 1176
SalI GTCGAC 2 cut(s) 289, 725
SapI GCTCTTC 1 cut(s) 1739
SatI GCNGC 9 cut(s) 93, 113, 354, 365, 1173, 1496, 1628, 1805, 1837
Sau3AI GATC 7 cut(s) 283, 460, 828, 906, 933, 1282, 1383
SduI GDGCHC 4 cut(s) 243, 543, 1136, 1308
SfaNI GCATC 4 cut(s) 945, 954, 1077, 1279
SfiI GGCCNNNNNGGCC 1 cut(s) 185
SfoI GGCGCC 1 cut(s) 357
Sfr303I CCGCGG 1 cut(s) 1176
SgrAI CRCCGGYG 1 cut(s) 1739
SgrBI CCGCGG 1 cut(s) 1176
SinI GGWCC 6 cut(s) 1186, 1463, 1477, 1610, 1615, 1653
SmaI CCCGGG 1 cut(s) 1129
SmiMI CAYNNNNRTG 1 cut(s) 1238
SmlI CTYRAG 1 cut(s) 542
SmoI CTYRAG 1 cut(s) 542
SphI GCATGC 2 cut(s) 1605, 1723
Sse9I AATT 5 cut(s) 334, 532, 796, 995, 1244
SspDI GGCGCC 1 cut(s) 355
SspMI CTAG 3 cut(s) 896, 1223, 1286
SstI GAGCTC 2 cut(s) 543, 1308
StyI CCWWGG 2 cut(s) 57, 596
TaaI ACNGT 3 cut(s) 226, 265, 1435
TaqII GACCGA 1 cut(s) 1525
TasI AATT 5 cut(s) 334, 532, 796, 995, 1244
TatI WGTACW 2 cut(s) 1251, 1569
TauI GCSGC 6 cut(s) 95, 356, 367, 1175, 1630, 1807
TfiI GAWTC 5 cut(s) 370, 404, 587, 1078, 1158
TscAI CASTG 1 cut(s) 1652
TseFI GTSAC 3 cut(s) 820, 1429, 1849
TseI GCWGC 3 cut(s) 112, 1495, 1836
Tsp45I GTSAC 3 cut(s) 820, 1429, 1849
TspDTI ATGAA 8 cut(s) 17, 205, 257, 488, 1091, 1226, 1430, 1676
TspGWI ACGGA 3 cut(s) 1333, 1390, 1476
TspMI CCCGGG 1 cut(s) 1127
TspRI CASTG 1 cut(s) 1652
Tth111I GACNNNGTC 2 cut(s) 1619, 1639
VpaK11BI GGWCC 6 cut(s) 1186, 1463, 1477, 1610, 1615, 1653
XagI CCTNNNNNAGG 1 cut(s) 809
XapI RAATTY 4 cut(s) 334, 796, 995, 1244
XbaI TCTAGA 1 cut(s) 1285
XceI RCATGY 2 cut(s) 1605, 1723
XcmI CCANNNNNNNNNTGG 1 cut(s) 1723
XmaI CCCGGG 1 cut(s) 1127
XmiI GTMKAC 3 cut(s) 290, 726, 918
XmnI GAANNNNTTC 2 cut(s) 1035, 1233
XspI CTAG 3 cut(s) 896, 1223, 1286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.