pycom13g02070

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0011800
Physical Location & Seq
Forward (+)
1389421 .. 1391267
1847 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g02070.1

Sequence Viewer

Length: 1668 bp
ATGGGCGGCGCCGTCGCTGGGATACAGCCTAGTCAGCAGCAAGTCCAGCTCGTTGACGACCCGTTTTTAGCTCCGGCAGAGTCGTCCATCACCACTGTCGATTTCCCAGATCATCGGAAGAGCAAATCCATTAGCACATCACCCACCCAAAATGTATTCGAAGACTGCAACTCTTCTTCCAGCTACTATGACTTCAAATCCATCCCCGGAAACGCCGTGTTCACCAAAACCCGCCCCGATTCTTCCTCGCGGGAGCCCAAGCGTCTCAAATCCTCATCCGGGTCTTCTCCCTCCGACCTCCTCTTTAACCGCCCCGCCGCCTCCTCCCTTCCACAACCACAACAACCCATCTCCCTCCCCGCCCCCGCCGAGTCATCATCAACCCGCCCAGCCCTCCTGGTTGACTCCCAGGAAAACGGAGTCCGACTCGTCCACGGCCTCATGGCCTGTGCGGAAGCCGTCCAGCAGAACAACTTCAACCTCGCCAAAGCCCTGGTGACCCAGATCGGCTACCTGGCAGGTTCACAAGCAGGTGCCATGCGTAAAGTCGCCACCTTCTTCGCCGAAGCCCTGGCCCATCGAATCTTCAGAGTCTACCCTCAGCCGCCGATCGACCACTCCTTCTCCGACATGCTGCAGATGCACTTCTACGAGACCTGCCCCTACCTGAAATTCGCCCACTTCACCGCCAATCAAGCCATCCTCGAATCCCTACAAGGCAAAACCAGAGTCCACGTCATCGATTTCTCCATGAACCAGGGGATGCAGTGGCCCGCTCTGATGCAGGCGTTGGCGCTTCGACCCGGCGGCCCGCCCGCTTTTCGGCTCACGGGTATAGGGCCGCCGTCTTCGGATAACTCTGACCACCTTCAGGAAGTGGGATGGAAACTCGCCCAATTGGCTGAAACCATCCACGTTGAGTTTGAATACAGAGGATTTGTGGCAAACAGCTTGGCCGATCTCGACGCGTCGATGCTCGAACTCAGACCGAGTGAGGTTGAATCTGTGGCGGTCAACTCGGTCTTCGAGTTGCACAAGCTGCTAGCCCGACCCGGCGCGATTGAGAAGGTGCTTTCAGTGGTGAAGCAAATGAAGCCGGAGATCCTGACCGTGGTGGAGCAGGAGGCGAACCACAACGGTCCTGTTTTTATGGACCGGTTCAACGAGTCGCTCCACTACTACTCGACCCTGTTTGACTCGCTGGAGGGGTCGGCGAACAGCCAGGATAAGGTGATGTCGGAGGTTTATTTGGGGAAGCAAATCTGCAACGTAGTGGCGTGCGAAGGGTTGGACCGGGTGGAGAGGCACGAGACGTTGACCCAGTGGAGAGCCCGGTTCGACTCGGCAGATTTCGTCCCCGTTCATCTCGGGTCGAACGCGTTCAAGCAAGCGAGTATGCTGCTGGCGTTGTTCGCCGGCGGAGATGGATATCGGGTGGAGGAGAACGACGGGTGTCTGATGTTGGGCTGGCACACTCCTGGATGCGATCAGGAGATTGAGATTGGGACACCCAAAGAGGACCACCATTTAGGCCCATTAGCAAAATGTTCGGTTGAGAACACCATCAGCCTCTTTCTTTTTACCTTTTTTTTTTTACTTCAATTTGTTAGGGGTTATTTCTGTGTAGCAAGAGGTGGATGTGTACGAATGTTTATATTTCATACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000910 GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006808 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0007049 GO:0007154 GO:0007165 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009739 GO:0009740 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009892 GO:0009893 GO:0009894 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010218 GO:0010232 GO:0010233 GO:0010453 GO:0010454 GO:0010468 GO:0010476 GO:0010556 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032501 GO:0032870 GO:0033206 GO:0033993 GO:0035690 GO:0040008 GO:0042176 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045595 GO:0045596 GO:0045926 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048638 GO:0048640 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051246 GO:0051252 GO:0051301 GO:0051321 GO:0051716 GO:0060255 GO:0061640 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071370 GO:0071395 GO:0071396 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900032 GO:1900033 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903046 GO:1903506 GO:1905613 GO:1905614 GO:1905622 GO:2000024 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
DELLA GRAS

Protein Analysis

556

Amino Acids

61.19

Weight (kDa)

5.71

Isoelectric Point (pI)

47.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 143 - 492 1.8e-127 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011800)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14920 AT2G01570
fragaria_vesca FvH4_4g34110
malus_domestica MD13G1022100.v1.1 MD16G1023300.v1.1
prunus_persica Prupe.1G329600_v2.0.a1
pyrus_communis pycom13g02070 pycom16g02040 pycom16g02050
rosa_chinensis RchiOBHm_Chr4g0443621
rosa_laevigata RLG00000005909
rosa_multiflora Rmu_sc0001118.1_g000014
rosa_roxburghii Rroxscaffold_5G00384170
rosa_samantha Rh4AG403600 Rh4AG405600 Rh4BG416600 Rh4CG431100 Rh4DG412200
rosa_wichuraiana Rw4G034820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 521
Acc36I ACCTGC 3 cut(s) 509, 521, 665
AccB1I GGYRCC 2 cut(s) 8, 533
AccBSI CCGCTC 1 cut(s) 776
AccI GTMKAC 1 cut(s) 594
AccII CGCG 4 cut(s) 250, 968, 1058, 1379
AclWI GGATC 1 cut(s) 1096
AcoI YGGCCR 1 cut(s) 954
AcsI RAATTY 1 cut(s) 671
AcuI CTGAAG 2 cut(s) 571, 854
AcyI GRCGYC 1 cut(s) 9
AfaI GTAC 1 cut(s) 1644
AfiI CCNNNNNNNGG 6 cut(s) 18, 279, 822, 871, 1111, 1228
AflIII ACRYGT 2 cut(s) 966, 1377
AgeI ACCGGT 1 cut(s) 1155
AgsI TTSAA 7 cut(s) 196, 478, 926, 1001, 1162, 1384, 1601
AjiI CACGTC 1 cut(s) 736
AjnI CCWGG 8 cut(s) 396, 408, 492, 513, 570, 756, 1221, 1477
AluBI AGCT 5 cut(s) 49, 71, 183, 951, 1039
AluI AGCT 5 cut(s) 49, 71, 183, 951, 1039
Alw26I GTCTC 3 cut(s) 269, 647, 1304
AlwI GGATC 1 cut(s) 1096
Ama87I CYCGRG 1 cut(s) 1367
AoxI GGCC 8 cut(s) 436, 444, 573, 770, 808, 839, 954, 1531
ApeKI GCWGC 4 cut(s) 37, 634, 1039, 1399
ApoI RAATTY 1 cut(s) 671
ArsI GACNNNNNNTTYG 2 cut(s) 714, 746
AsiGI ACCGGT 1 cut(s) 1155
Asp700I GAANNNNTTC 2 cut(s) 473, 1379
AspLEI GCGC 3 cut(s) 11, 796, 1058
AspS9I GGNCC 9 cut(s) 574, 771, 809, 839, 1139, 1153, 1291, 1519, 1532
AsuC2I CCSGG 6 cut(s) 207, 280, 804, 1053, 1295, 1333
AsuHPI GGTGA 7 cut(s) 82, 132, 214, 508, 676, 1093, 1243
AsuII TTCGAA 1 cut(s) 159
AsuNHI GCTAGC 1 cut(s) 1042
AvaI CYCGRG 1 cut(s) 1367
AvaII GGWCC 4 cut(s) 1139, 1153, 1291, 1519
BanI GGYRCC 2 cut(s) 8, 533
BanII GRGCYC 2 cut(s) 258, 1333
BauI CACGAG 1 cut(s) 1307
BbsI GAAGAC 4 cut(s) 168, 276, 840, 1015
BbvCI CCTCAGC 1 cut(s) 600
BbvI GCAGC 4 cut(s) 49, 621, 1026, 1386
BccI CCATC 9 cut(s) 95, 209, 356, 585, 707, 876, 917, 1418, 1571
BceAI ACGGC 4 cut(s) 200, 443, 451, 829
BcgI CGANNNNNNTGC 4 cut(s) 1381, 1415, 1530, 1564
BciT130I CCWGG 8 cut(s) 398, 410, 494, 515, 572, 758, 1223, 1479
BciVI GTATCC 1 cut(s) 15
BcnI CCSGG 6 cut(s) 207, 280, 804, 1053, 1295, 1333
BcoDI GTCTC 3 cut(s) 269, 647, 1304
BfaI CTAG 2 cut(s) 30, 1043
BfmI CTRYAG 1 cut(s) 635
BfoI RGCGCY 2 cut(s) 12, 797
BfuAI ACCTGC 3 cut(s) 509, 521, 665
BfuI GTATCC 1 cut(s) 15
BglI GCCNNNNNGGC 1 cut(s) 899
BisI GCNGC 9 cut(s) 7, 38, 318, 605, 635, 808, 842, 1040, 1400
BlsI GCNGC 9 cut(s) 8, 39, 319, 606, 636, 809, 843, 1041, 1401
Bme18I GGWCC 4 cut(s) 1139, 1153, 1291, 1519
BmeT110I CYCGRG 1 cut(s) 1367
BmgBI CACGTC 1 cut(s) 736
BmgT120I GGNCC 9 cut(s) 574, 771, 809, 839, 1139, 1153, 1291, 1519, 1532
BmiI GGNNCC 3 cut(s) 10, 255, 535
BmrI ACTGGG 1 cut(s) 1315
BmsI GCATC 5 cut(s) 630, 753, 771, 963, 1472
BmtI GCTAGC 1 cut(s) 1046
BmuI ACTGGG 1 cut(s) 1315
BoxI GACNNNNGTC 1 cut(s) 1452
BpiI GAAGAC 4 cut(s) 168, 276, 840, 1015
BplI GAGNNNNNCTC 2 cut(s) 411, 443
BpmI CTGGAG 1 cut(s) 1223
Bpu10I CCTNAGC 1 cut(s) 600
Bpu14I TTCGAA 1 cut(s) 159
BpuMI CCSGG 6 cut(s) 207, 280, 804, 1053, 1295, 1333
Bsa29I ATCGAT 1 cut(s) 741
BsaBI GATNNNNATC 1 cut(s) 1428
BsaHI GRCGYC 1 cut(s) 9
BsaI GGTCTC 1 cut(s) 647
BsaJI CCNNGG 7 cut(s) 205, 408, 433, 492, 570, 757, 1110
BsaWI WCCGGW 1 cut(s) 1155
BsaXI ACNNNNNCTCC 2 cut(s) 608, 638
Bsc4I CCNNNNNNNGG 6 cut(s) 18, 279, 822, 871, 1111, 1228
Bse118I RCCGGY 2 cut(s) 1155, 1415
Bse1I ACTGG 1 cut(s) 1321
Bse8I GATNNNNATC 1 cut(s) 1428
BseBI CCWGG 8 cut(s) 398, 410, 494, 515, 572, 758, 1223, 1479
BseCI ATCGAT 1 cut(s) 741
BseDI CCNNGG 7 cut(s) 205, 408, 433, 492, 570, 757, 1110
BseGI GGATG 8 cut(s) 201, 275, 699, 768, 887, 909, 1487, 1643
BseJI GATNNNNATC 1 cut(s) 1428
BseLI CCNNNNNNNGG 6 cut(s) 18, 279, 822, 871, 1111, 1228
BseMII CTCAG 2 cut(s) 614, 997
BseNI ACTGG 1 cut(s) 1321
BseRI GAGGAG 3 cut(s) 290, 313, 1454
BseXI GCAGC 4 cut(s) 49, 621, 1026, 1386
BseYI CCCAGC 2 cut(s) 17, 388
Bsh1236I CGCG 4 cut(s) 250, 968, 1058, 1379
Bsh1285I CGRYCG 1 cut(s) 612
BshFI GGCC 8 cut(s) 438, 446, 575, 772, 810, 841, 956, 1533
BshNI GGYRCC 2 cut(s) 8, 533
BshTI ACCGGT 1 cut(s) 1155
BshVI ATCGAT 1 cut(s) 741
BsiEI CGRYCG 1 cut(s) 612
BsiHKCI CYCGRG 1 cut(s) 1367
BslFI GGGAC 2 cut(s) 1340, 1519
BslI CCNNNNNNNGG 6 cut(s) 18, 279, 822, 871, 1111, 1228
BsmAI GTCTC 3 cut(s) 269, 647, 1304
BsmBI CGTCTC 2 cut(s) 269, 1304
BsmFI GGGAC 2 cut(s) 1340, 1519
BsnI GGCC 8 cut(s) 438, 446, 575, 772, 810, 841, 956, 1533
Bso31I GGTCTC 1 cut(s) 647
BsoBI CYCGRG 1 cut(s) 1367
Bsp119I TTCGAA 1 cut(s) 159
Bsp1286I GDGCHC 2 cut(s) 258, 1333
Bsp143I GATC 6 cut(s) 109, 504, 609, 958, 1101, 1486
BspANI GGCC 8 cut(s) 438, 446, 575, 772, 810, 841, 956, 1533
BspCNI CTCAG 2 cut(s) 613, 996
BspDI ATCGAT 1 cut(s) 741
BspFNI CGCG 4 cut(s) 250, 968, 1058, 1379
BspLI GGNNCC 3 cut(s) 10, 255, 535
BspMAI CTGCAG 1 cut(s) 639
BspMI ACCTGC 3 cut(s) 509, 521, 665
BspOI GCTAGC 1 cut(s) 1046
BspPI GGATC 1 cut(s) 1096
BspQI GCTCTTC 1 cut(s) 113
BspT104I TTCGAA 1 cut(s) 159
BspT107I GGYRCC 2 cut(s) 8, 533
BspTNI GGTCTC 1 cut(s) 647
BsrBI CCGCTC 1 cut(s) 776
BsrFI RCCGGY 2 cut(s) 1155, 1415
BsrI ACTGG 1 cut(s) 1321
BssAI RCCGGY 2 cut(s) 1155, 1415
BssECI CCNNGG 7 cut(s) 205, 408, 433, 492, 570, 757, 1110
BssMI GATC 6 cut(s) 109, 504, 609, 958, 1101, 1486
BssNI GRCGYC 1 cut(s) 9
BssSI CACGAG 1 cut(s) 1307
Bst2BI CACGAG 1 cut(s) 1307
Bst2UI CCWGG 8 cut(s) 398, 410, 494, 515, 572, 758, 1223, 1479
Bst4CI ACNGT 3 cut(s) 97, 1111, 1139
Bst6I CTCTTC 2 cut(s) 113, 178
BstACI GRCGYC 1 cut(s) 9
BstAPI GCANNNNNTGC 1 cut(s) 1039
BstBI TTCGAA 1 cut(s) 159
BstDEI CTNAG 2 cut(s) 600, 983
BstDSI CCRYGG 2 cut(s) 433, 1110
BstEII GGTNACC 1 cut(s) 496
BstF5I GGATG 8 cut(s) 201, 275, 699, 768, 887, 909, 1487, 1643
BstFNI CGCG 4 cut(s) 250, 968, 1058, 1379
BstH2I RGCGCY 2 cut(s) 12, 797
BstHHI GCGC 3 cut(s) 11, 796, 1058
BstKTI GATC 6 cut(s) 112, 507, 612, 961, 1104, 1489
BstMAI GTCTC 3 cut(s) 269, 647, 1304
BstMBI GATC 6 cut(s) 109, 504, 609, 958, 1101, 1486
BstMCI CGRYCG 1 cut(s) 612
BstMWI GCNNNNNNNGC 8 cut(s) 34, 46, 640, 695, 899, 1039, 1093, 1412
BstNI CCWGG 8 cut(s) 398, 410, 494, 515, 572, 758, 1223, 1479
BstNSI RCATGY 1 cut(s) 634
BstPAI GACNNNNGTC 1 cut(s) 1452
BstPI GGTNACC 1 cut(s) 496
BstSFI CTRYAG 1 cut(s) 635
BstUI CGCG 4 cut(s) 250, 968, 1058, 1379
BstV1I GCAGC 4 cut(s) 49, 621, 1026, 1386
BstV2I GAAGAC 4 cut(s) 168, 276, 840, 1015
BstX2I RGATCY 1 cut(s) 1101
BstXI CCANNNNNNTGG 1 cut(s) 493
BstYI RGATCY 1 cut(s) 1101
Bsu15I ATCGAT 1 cut(s) 741
BsuI GTATCC 1 cut(s) 15
BsuRI GGCC 8 cut(s) 438, 446, 575, 772, 810, 841, 956, 1533
BsuTUI ATCGAT 1 cut(s) 741
BtgI CCRYGG 2 cut(s) 433, 1110
BtrI CACGTC 1 cut(s) 736
BtsCI GGATG 8 cut(s) 201, 275, 699, 768, 887, 909, 1487, 1643
BtsI GCAGTG 1 cut(s) 773
BtsIMutI CAGTG 4 cut(s) 93, 773, 1083, 1328
BveI ACCTGC 3 cut(s) 509, 521, 665
CfoI GCGC 3 cut(s) 11, 796, 1058
Cfr10I RCCGGY 2 cut(s) 1155, 1415
Cfr13I GGNCC 9 cut(s) 574, 771, 809, 839, 1139, 1153, 1291, 1519, 1532
ClaI ATCGAT 1 cut(s) 741
CseI GACGC 3 cut(s) 251, 957, 974
Csp6I GTAC 1 cut(s) 1643
CspAI ACCGGT 1 cut(s) 1155
CviAII CATG 4 cut(s) 442, 538, 631, 751
CviQI GTAC 1 cut(s) 1643
DdeI CTNAG 2 cut(s) 600, 983
DinI GGCGCC 1 cut(s) 10
DpnI GATC 6 cut(s) 111, 506, 611, 960, 1103, 1488
DpnII GATC 6 cut(s) 109, 504, 609, 958, 1101, 1486
EaeI YGGCCR 1 cut(s) 954
Eam1104I CTCTTC 2 cut(s) 113, 178
EarI CTCTTC 2 cut(s) 113, 178
EciI GGCGGA 1 cut(s) 1434
Eco24I GRGCYC 2 cut(s) 258, 1333
Eco31I GGTCTC 1 cut(s) 647
Eco32I GATATC 1 cut(s) 1430
Eco47I GGWCC 4 cut(s) 1139, 1153, 1291, 1519
Eco57I CTGAAG 2 cut(s) 571, 854
Eco88I CYCGRG 1 cut(s) 1367
Eco91I GGTNACC 1 cut(s) 496
EcoO65I GGTNACC 1 cut(s) 496
EcoRII CCWGG 8 cut(s) 396, 408, 492, 513, 570, 756, 1221, 1477
EcoRV GATATC 1 cut(s) 1430
EcoT38I GRGCYC 2 cut(s) 258, 1333
EgeI GGCGCC 1 cut(s) 10
EheI GGCGCC 1 cut(s) 10
Esp3I CGTCTC 2 cut(s) 269, 1304
FaeI CATG 4 cut(s) 445, 541, 634, 754
FaqI GGGAC 2 cut(s) 1340, 1519
FatI CATG 4 cut(s) 441, 537, 630, 750
FauI CCCGC 9 cut(s) 239, 243, 322, 367, 373, 392, 781, 819, 823
FblI GTMKAC 1 cut(s) 594
Fnu4HI GCNGC 9 cut(s) 7, 38, 318, 605, 635, 808, 842, 1040, 1400
FokI GGATG 8 cut(s) 188, 262, 686, 775, 894, 896, 1494, 1650
FriOI GRGCYC 2 cut(s) 258, 1333
Fsp4HI GCNGC 9 cut(s) 7, 38, 318, 605, 635, 808, 842, 1040, 1400
FspBI CTAG 2 cut(s) 30, 1043
GlaI GCGC 3 cut(s) 10, 795, 1057
GluI GCNGC 9 cut(s) 7, 38, 318, 605, 635, 808, 842, 1040, 1400
GsaI CCCAGC 2 cut(s) 21, 392
GsuI CTGGAG 1 cut(s) 1223
HaeII RGCGCY 2 cut(s) 12, 797
HaeIII GGCC 8 cut(s) 438, 446, 575, 772, 810, 841, 956, 1533
HgaI GACGC 3 cut(s) 251, 957, 974
HhaI GCGC 3 cut(s) 11, 796, 1058
Hin1I GRCGYC 1 cut(s) 9
Hin1II CATG 4 cut(s) 445, 541, 634, 754
Hin6I GCGC 3 cut(s) 9, 794, 1056
HinP1I GCGC 3 cut(s) 9, 794, 1056
HincII GTYRAC 4 cut(s) 55, 403, 1015, 1317
HindII GTYRAC 4 cut(s) 55, 403, 1015, 1317
HphI GGTGA 7 cut(s) 82, 132, 214, 508, 676, 1093, 1243
Hpy188III TCNNGA 4 cut(s) 872, 962, 1105, 1490
Hpy99I CGWCG 4 cut(s) 17, 968, 973, 1451
HpyAV CCTTC 6 cut(s) 338, 565, 631, 878, 1060, 1277
HpyCH4III ACNGT 3 cut(s) 97, 1111, 1139
HpyCH4IV ACGT 4 cut(s) 735, 915, 1269, 1313
HpyCH4V TGCA 7 cut(s) 168, 637, 643, 766, 784, 1033, 1266
HpyF10VI GCNNNNNNNGC 8 cut(s) 34, 46, 640, 695, 899, 1039, 1093, 1412
HpyF3I CTNAG 2 cut(s) 600, 983
HpySE526I ACGT 4 cut(s) 735, 915, 1269, 1313
Hsp92I GRCGYC 1 cut(s) 9
Hsp92II CATG 4 cut(s) 445, 541, 634, 754
HspAI GCGC 3 cut(s) 9, 794, 1056
KasI GGCGCC 1 cut(s) 8
KroI GCCGGC 1 cut(s) 1415
KroNI GCCGGC 1 cut(s) 1417
Kzo9I GATC 6 cut(s) 109, 504, 609, 958, 1101, 1486
LguI GCTCTTC 1 cut(s) 113
LmnI GCTCC 4 cut(s) 76, 253, 1117, 1176
Lsp1109I GCAGC 4 cut(s) 49, 621, 1026, 1386
LweI GCATC 5 cut(s) 630, 753, 771, 963, 1472
MaeI CTAG 2 cut(s) 30, 1043
MaeII ACGT 4 cut(s) 735, 915, 1269, 1313
MaeIII GTNAC 1 cut(s) 496
MalI GATC 6 cut(s) 111, 506, 611, 960, 1103, 1488
MbiI CCGCTC 1 cut(s) 776
MboI GATC 6 cut(s) 109, 504, 609, 958, 1101, 1486
MfeI CAATTG 1 cut(s) 896
MflI RGATCY 1 cut(s) 1101
MhlI GDGCHC 2 cut(s) 258, 1333
MluCI AATT 3 cut(s) 671, 896, 1601
MluI ACGCGT 2 cut(s) 966, 1377
Mly113I GGCGCC 1 cut(s) 9
MmeI TCCRAC 5 cut(s) 318, 448, 651, 1218, 1269
MreI CGCCGGCG 1 cut(s) 1415
MroNI GCCGGC 1 cut(s) 1415
MroXI GAANNNNTTC 2 cut(s) 473, 1379
MseI TTAA 1 cut(s) 306
MunI CAATTG 1 cut(s) 896
MvaI CCWGG 8 cut(s) 398, 410, 494, 515, 572, 758, 1223, 1479
MvnI CGCG 4 cut(s) 250, 968, 1058, 1379
MwoI GCNNNNNNNGC 8 cut(s) 34, 46, 640, 695, 899, 1039, 1093, 1412
NaeI GCCGGC 1 cut(s) 1417
NarI GGCGCC 1 cut(s) 9
NciI CCSGG 6 cut(s) 207, 280, 804, 1053, 1295, 1333
NdeII GATC 6 cut(s) 109, 504, 609, 958, 1101, 1486
NgoMIV GCCGGC 1 cut(s) 1415
NheI GCTAGC 1 cut(s) 1042
NlaIII CATG 4 cut(s) 445, 541, 634, 754
NlaIV GGNNCC 3 cut(s) 10, 255, 535
NmeAIII GCCGAG 2 cut(s) 394, 1322
NmuCI GTSAC 1 cut(s) 496
NspI RCATGY 1 cut(s) 634
NspV TTCGAA 1 cut(s) 159
PaqCI CACCTGC 1 cut(s) 521
PciSI GCTCTTC 1 cut(s) 113
PdiI GCCGGC 1 cut(s) 1417
PdmI GAANNNNTTC 2 cut(s) 473, 1379
PfeI GAWTC 4 cut(s) 239, 582, 707, 1001
PfoI TCCNGGA 1 cut(s) 1477
PinAI ACCGGT 1 cut(s) 1155
PkrI GCNGC 9 cut(s) 8, 39, 319, 606, 636, 809, 843, 1041, 1401
Ple19I CGATCG 1 cut(s) 612
PluTI GGCGCC 1 cut(s) 12
PshAI GACNNNNGTC 1 cut(s) 1452
Psp6I CCWGG 8 cut(s) 396, 408, 492, 513, 570, 756, 1221, 1477
PspEI GGTNACC 1 cut(s) 496
PspFI CCCAGC 2 cut(s) 17, 388
PspGI CCWGG 8 cut(s) 396, 408, 492, 513, 570, 756, 1221, 1477
PspN4I GGNNCC 3 cut(s) 10, 255, 535
PspPI GGNCC 9 cut(s) 574, 771, 809, 839, 1139, 1153, 1291, 1519, 1532
PstI CTGCAG 1 cut(s) 639
PsuI RGATCY 1 cut(s) 1101
PvuI CGATCG 1 cut(s) 612
RsaI GTAC 1 cut(s) 1644
RsaNI GTAC 1 cut(s) 1643
SapI GCTCTTC 1 cut(s) 113
SaqAI TTAA 1 cut(s) 306
SatI GCNGC 9 cut(s) 7, 38, 318, 605, 635, 808, 842, 1040, 1400
Sau3AI GATC 6 cut(s) 109, 504, 609, 958, 1101, 1486
Sau96I GGNCC 9 cut(s) 574, 771, 809, 839, 1139, 1153, 1291, 1519, 1532
SduI GDGCHC 2 cut(s) 258, 1333
SfaNI GCATC 5 cut(s) 630, 753, 771, 963, 1472
SfcI CTRYAG 1 cut(s) 635
SfoI GGCGCC 1 cut(s) 10
SfuI TTCGAA 1 cut(s) 159
SgrAI CRCCGGYG 1 cut(s) 1415
SinI GGWCC 4 cut(s) 1139, 1153, 1291, 1519
Sse9I AATT 3 cut(s) 671, 896, 1601
SspDI GGCGCC 1 cut(s) 8
SspMI CTAG 2 cut(s) 30, 1043
TaaI ACNGT 3 cut(s) 97, 1111, 1139
TaiI ACGT 4 cut(s) 738, 918, 1272, 1316
TaqII GACCGA 2 cut(s) 1003, 1009
TasI AATT 3 cut(s) 671, 896, 1601
TauI GCSGC 5 cut(s) 9, 320, 607, 810, 844
TfiI GAWTC 4 cut(s) 239, 582, 707, 1001
Tru1I TTAA 1 cut(s) 306
Tru9I TTAA 1 cut(s) 306
TscAI CASTG 4 cut(s) 100, 773, 1083, 1328
TseFI GTSAC 1 cut(s) 496
TseI GCWGC 4 cut(s) 37, 634, 1039, 1399
Tsp45I GTSAC 1 cut(s) 496
TspDTI ATGAA 4 cut(s) 767, 1106, 1352, 1649
TspGWI ACGGA 1 cut(s) 432
TspRI CASTG 4 cut(s) 100, 773, 1083, 1328
VpaK11BI GGWCC 4 cut(s) 1139, 1153, 1291, 1519
XapI RAATTY 1 cut(s) 671
XceI RCATGY 1 cut(s) 634
XmiI GTMKAC 1 cut(s) 594
XmnI GAANNNNTTC 2 cut(s) 473, 1379
XspI CTAG 2 cut(s) 30, 1043
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.