Rh4CG431100

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0011800
Physical Location & Seq
Forward (+)
67144928 .. 67147860
2933 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG431100.1

Sequence Viewer

Length: 1857 bp
ATGAAAAGAGAACATCAAAGCCACCCCCACCACCCTAATCCAAACCCTTCCATGGCTTCCACATCCAATGATAAGGCAGGTAAGGCGGCGATATGGGAGGACTCGCAGCGCGACGACGGCATGGATGAGCTTCTGGCTGTGCTGGGCTACAAGGTGAAGTCTTCCAACATGGCCGATGTGGCCCAGAAGCTCGAACAGCTTGAAGAGTTCATGGGGACAGTTCAGGAAGACGGGCTCTCCCAGCTGGCTTCGGATACGGTTCATTACAATCCCTCGGATCTGTCGACTTGGCTGGAGAGCATGATTTCGGAGATAACTCCGCCTCCGAATTTCGACCCTGTAATGGCGGCGCCACCGCCGCTGAATCACCTCGCTGGAAGCTCTGTTGTGCTGGACGATTCGTTTTTGGCTCCGGCCGAGTCCTCCACCATAACCTCTATCGATTTTGGCGATCAACAACACATGAACACGAACAACAAATCTCTCAGCCCGCGAACCCAGTTCGAGGACTGCTCGTCCTCCAATTACGAGCTCAAGGCCATACCTGGAAAAGCCATTTTCAGCAGCCAGACCCAGTTCGATTCTTCCCCAAGAGAGCCAAAACGGCTCAAACCTTCTTCTTCTTCAGATTTCTACTCCACCACCACCACCACCAACAACTCGTCTCTCCAACCCGTCGTCTCCCTCCCCAACAACGAGTCAACTCGCCCGGTGGTCGTGGTCGACTCGCAAGAGAACGGCGTCAGACTCGTCCACGGCCTCATGGCCTGCGCCGAAGCCGTCCAGCGCAAGAATTTCGACCTCGCTAAGGCCCTGGTCACCCAGATCAGCTACTTGGCGATTTCACAAGCCGGCGCTATGCGAAAAGTCGCCACCTTCTTCGCCGAGGCTCTAGCCCAGCGGATCTGGGGGGTCTACCCTCAGCCACCGATCGACCACACCTACTCCGAGATGCTCCAGATGCACTTCTACGAGACCTGCCCTTACCTCAAATTCGCCCATTTCACAGCAAATCAAGCCATTCTCGAAGGCTTTCAAGACAAGAAGCGAGTCCATGTCATCGATTTCTCCATGAATCAGGGGATGCAATGGCCGGCTCTCATGCAGGCCCTCGCTCTCCGACCCGGCGGCCCGCCCGCGTTTCGCTTAACCGGAATCGGCCCGCCCGCCGCGGATAACTCGGACCATCTTCAGGAAGTGGGCTGGAAGCTGGCCCAGCTAGCCGAAACCATTCATGTGGAATTTGAGTACAGAGGCTTTGTTGCTAACAGCTTGGCTGATCTAGATGCTTCCATGCTGGAGCTCCGGCCGAGCGAGGTCGAGTCTGTGGCGGTGAACTCCGTCTTCGAGCTTCACAAGCTGTTGGCTCGGCCCGGTGCGATCGACAAAGTGTTGTCCGTGGTGAAGCAAATGAAGCCGGAGATTGTGACGGTTGTGGAGCAGGAAGCGAACCACAACGGTCCGGTTTTCCTGGACCGGTTCAACGAGTCGCTGCACTACTACTCCACCCTGTTTGACTCGCTGGAGGGGTCGGTCAACAGCCAGGACAAGATGATGTCGGAGGTGTACTTGGGGAAGCAAATCTTCAATGTGGTGGCATGTGAGGGACCGGACCGGGTCGAGCGGCACGAGACGCTGGCGCAGTGGCGGACCCGGTTCGACGCGTCCGGTTTCGCTCCGGTTCATCTCGGTTCCAACGCGTTCAAGCAAGCCAGCATGCTCTTGGCGCTCTTCGCCGGCGGAGATGGGTACAGAGTGGAGGAGAACGACGGGTGTTTGATGTTGGGGTGGCACACTCGGCCGCTCATCGCCACCTCGGCCTGGAAACTCGGCTGCTCCCAATCGGTGACGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000910 GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006808 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0007049 GO:0007154 GO:0007165 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009739 GO:0009740 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009892 GO:0009893 GO:0009894 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010218 GO:0010232 GO:0010233 GO:0010453 GO:0010454 GO:0010468 GO:0010476 GO:0010556 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032501 GO:0032870 GO:0033206 GO:0033993 GO:0035690 GO:0040008 GO:0042176 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045595 GO:0045596 GO:0045926 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048638 GO:0048640 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051246 GO:0051252 GO:0051301 GO:0051321 GO:0051716 GO:0060255 GO:0061640 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071370 GO:0071395 GO:0071396 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900032 GO:1900033 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903046 GO:1903506 GO:1905613 GO:1905614 GO:1905622 GO:2000024 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
DELLA GRAS

Protein Analysis

618

Amino Acids

68.24

Weight (kDa)

5.26

Isoelectric Point (pI)

43.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DELLA PF12041 42 - 109 1.1e-34 Transcriptional regulator DELLA protein N terminal
GRAS PF03514 250 - 609 3.9e-133 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011800)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14920 AT2G01570
fragaria_vesca FvH4_4g34110
malus_domestica MD13G1022100.v1.1 MD16G1023300.v1.1
prunus_persica Prupe.1G329600_v2.0.a1
pyrus_communis pycom13g02070 pycom16g02040 pycom16g02050
rosa_chinensis RchiOBHm_Chr4g0443621
rosa_laevigata RLG00000005909
rosa_multiflora Rmu_sc0001118.1_g000014
rosa_roxburghii Rroxscaffold_5G00384170
rosa_samantha Rh4AG403600 Rh4AG405600 Rh4BG416600 Rh4CG431100 Rh4DG412200
rosa_wichuraiana Rw4G034820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 68, 986
AccB1I GGYRCC 1 cut(s) 349
AccBSI CCGCTC 2 cut(s) 1624, 1804
AccI GTMKAC 3 cut(s) 284, 723, 915
AccII CGCG 6 cut(s) 111, 493, 1139, 1172, 1664, 1700
AclWI GGATC 2 cut(s) 285, 911
AcoI YGGCCR 5 cut(s) 171, 414, 1091, 1307, 1799
AcsI RAATTY 4 cut(s) 328, 793, 992, 1241
AcuI CTGAAG 2 cut(s) 609, 1175
AcyI GRCGYC 2 cut(s) 350, 741
AfaI GTAC 3 cut(s) 1250, 1568, 1751
AfiI CCNNNNNNNGG 6 cut(s) 52, 343, 505, 808, 1192, 1821
AflIII ACRYGT 2 cut(s) 1662, 1698
AgeI ACCGGT 1 cut(s) 1476
AgsI TTSAA 5 cut(s) 203, 1037, 1483, 1588, 1705
AhdI GACNNNNNGTC 1 cut(s) 514
AjnI CCWGG 5 cut(s) 544, 813, 1470, 1542, 1820
Alw21I GWGCWC 2 cut(s) 534, 1305
Alw26I GTCTC 4 cut(s) 669, 685, 968, 1625
AlwI GGATC 2 cut(s) 285, 911
ApeKI GCWGC 4 cut(s) 106, 564, 1492, 1833
ApoI RAATTY 4 cut(s) 328, 793, 992, 1241
AsiGI ACCGGT 1 cut(s) 1476
Asp700I GAANNNNTTC 2 cut(s) 1032, 1230
AspLEI GCGC 7 cut(s) 111, 352, 773, 789, 857, 1642, 1729
AsuC2I CCSGG 5 cut(s) 710, 1125, 1374, 1616, 1654
AsuHPI GGTGA 5 cut(s) 166, 359, 811, 1345, 1414
AsuNHI GCTAGC 1 cut(s) 1219
AvaII GGWCC 6 cut(s) 1183, 1460, 1474, 1607, 1612, 1650
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 3 cut(s) 237, 534, 1305
BauI CACGAG 1 cut(s) 1628
BbsI GAAGAC 3 cut(s) 153, 234, 1336
Bbv12I GWGCWC 2 cut(s) 534, 1305
BbvCI CCTCAGC 1 cut(s) 921
BbvI GCAGC 4 cut(s) 118, 576, 1479, 1820
BccI CCATC 2 cut(s) 1194, 1739
BceAI ACGGC 5 cut(s) 133, 620, 754, 764, 772
BcgI CGANNNNNNTGC 2 cut(s) 778, 812
BciT130I CCWGG 5 cut(s) 546, 815, 1472, 1544, 1822
BciVI GTATCC 1 cut(s) 247
BcnI CCSGG 5 cut(s) 710, 1125, 1374, 1616, 1654
BcoDI GTCTC 4 cut(s) 669, 685, 968, 1625
BfaI CTAG 3 cut(s) 893, 1220, 1283
BfoI RGCGCY 3 cut(s) 353, 858, 1730
BfuAI ACCTGC 2 cut(s) 68, 986
BfuI GTATCC 1 cut(s) 247
BglI GCCNNNNNGGC 3 cut(s) 179, 604, 1817
Bme18I GGWCC 6 cut(s) 1183, 1460, 1474, 1607, 1612, 1650
BmeRI GACNNNNNGTC 1 cut(s) 514
BmiI GGNNCC 5 cut(s) 351, 411, 1608, 1652, 1693
BmrI ACTGGG 2 cut(s) 493, 568
BmsI GCATC 4 cut(s) 942, 951, 1074, 1276
BmtI GCTAGC 1 cut(s) 1223
BmuI ACTGGG 2 cut(s) 493, 568
BpiI GAAGAC 3 cut(s) 153, 234, 1336
BplI GAGNNNNNCTC 2 cut(s) 497, 529
BpmI CTGGAG 4 cut(s) 314, 941, 1319, 1544
Bpu10I CCTNAGC 2 cut(s) 807, 921
BpuEI CTTGAG 1 cut(s) 518
BpuMI CCSGG 5 cut(s) 710, 1125, 1374, 1616, 1654
Bsa29I ATCGAT 2 cut(s) 441, 1062
BsaHI GRCGYC 2 cut(s) 350, 741
BsaI GGTCTC 1 cut(s) 968
BsaJI CCNNGG 8 cut(s) 51, 273, 754, 813, 885, 1170, 1398, 1815
BsaWI WCCGGW 6 cut(s) 1151, 1462, 1476, 1609, 1667, 1678
BsaXI ACNNNNNCTCC 8 cut(s) 221, 251, 307, 337, 929, 959, 1487, 1517
Bsc4I CCNNNNNNNGG 6 cut(s) 52, 343, 505, 808, 1192, 1821
Bse118I RCCGGY 4 cut(s) 851, 1093, 1476, 1736
Bse1I ACTGG 2 cut(s) 499, 574
Bse3DI GCAATG 1 cut(s) 1094
BseBI CCWGG 5 cut(s) 546, 815, 1472, 1544, 1822
BseCI ATCGAT 2 cut(s) 441, 1062
BseDI CCNNGG 8 cut(s) 51, 273, 754, 813, 885, 1170, 1398, 1815
BseGI GGATG 3 cut(s) 62, 130, 1089
BseLI CCNNNNNNNGG 6 cut(s) 52, 343, 505, 808, 1192, 1821
BseMI GCAATG 1 cut(s) 1094
BseMII CTCAG 2 cut(s) 499, 935
BseNI ACTGG 2 cut(s) 499, 574
BseRI GAGGAG 1 cut(s) 1775
BseX3I CGGCCG 3 cut(s) 414, 1307, 1799
BseXI GCAGC 4 cut(s) 118, 576, 1479, 1820
BseYI CCCAGC 4 cut(s) 142, 240, 897, 1215
BsgI GTGCAG 1 cut(s) 1478
Bsh1236I CGCG 6 cut(s) 111, 493, 1139, 1172, 1664, 1700
Bsh1285I CGRYCG 5 cut(s) 417, 933, 1310, 1383, 1802
BshNI GGYRCC 1 cut(s) 349
BshTI ACCGGT 1 cut(s) 1476
BshVI ATCGAT 2 cut(s) 441, 1062
BsiEI CGRYCG 5 cut(s) 417, 933, 1310, 1383, 1802
BsiHKAI GWGCWC 2 cut(s) 534, 1305
BslFI GGGAC 2 cut(s) 229, 1620
BslI CCNNNNNNNGG 6 cut(s) 52, 343, 505, 808, 1192, 1821
BsmAI GTCTC 4 cut(s) 669, 685, 968, 1625
BsmBI CGTCTC 3 cut(s) 669, 685, 1625
BsmFI GGGAC 2 cut(s) 229, 1620
Bso31I GGTCTC 1 cut(s) 968
Bsp1286I GDGCHC 3 cut(s) 237, 534, 1305
Bsp143I GATC 7 cut(s) 277, 451, 825, 903, 930, 1279, 1380
Bsp19I CCATGG 1 cut(s) 51
BspCNI CTCAG 2 cut(s) 498, 934
BspDI ATCGAT 2 cut(s) 441, 1062
BspFNI CGCG 6 cut(s) 111, 493, 1139, 1172, 1664, 1700
BspLI GGNNCC 5 cut(s) 351, 411, 1608, 1652, 1693
BspMI ACCTGC 2 cut(s) 68, 986
BspOI GCTAGC 1 cut(s) 1223
BspPI GGATC 2 cut(s) 285, 911
BspQI GCTCTTC 1 cut(s) 1736
BspT107I GGYRCC 1 cut(s) 349
BspTNI GGTCTC 1 cut(s) 968
BsrBI CCGCTC 2 cut(s) 1624, 1804
BsrDI GCAATG 1 cut(s) 1094
BsrFI RCCGGY 4 cut(s) 851, 1093, 1476, 1736
BsrI ACTGG 2 cut(s) 499, 574
BssAI RCCGGY 4 cut(s) 851, 1093, 1476, 1736
BssECI CCNNGG 8 cut(s) 51, 273, 754, 813, 885, 1170, 1398, 1815
BssMI GATC 7 cut(s) 277, 451, 825, 903, 930, 1279, 1380
BssNI GRCGYC 2 cut(s) 350, 741
BssSI CACGAG 1 cut(s) 1628
BssT1I CCWWGG 1 cut(s) 51
Bst2BI CACGAG 1 cut(s) 1628
Bst2UI CCWGG 5 cut(s) 546, 815, 1472, 1544, 1822
Bst4CI ACNGT 4 cut(s) 220, 259, 1432, 1460
Bst6I CTCTTC 2 cut(s) 198, 1736
BstACI GRCGYC 2 cut(s) 350, 741
BstDEI CTNAG 3 cut(s) 485, 807, 921
BstDSI CCRYGG 4 cut(s) 51, 754, 1170, 1398
BstEII GGTNACC 1 cut(s) 817
BstENI CCTNNNNNAGG 1 cut(s) 806
BstF5I GGATG 3 cut(s) 62, 130, 1089
BstFNI CGCG 6 cut(s) 111, 493, 1139, 1172, 1664, 1700
BstH2I RGCGCY 3 cut(s) 353, 858, 1730
BstHHI GCGC 7 cut(s) 111, 352, 773, 789, 857, 1642, 1729
BstKTI GATC 7 cut(s) 280, 454, 828, 906, 933, 1282, 1383
BstMAI GTCTC 4 cut(s) 669, 685, 968, 1625
BstMBI GATC 7 cut(s) 277, 451, 825, 903, 930, 1279, 1380
BstMCI CGRYCG 5 cut(s) 417, 933, 1310, 1383, 1802
BstNI CCWGG 5 cut(s) 546, 815, 1472, 1544, 1822
BstNSI RCATGY 2 cut(s) 1602, 1720
BstPI GGTNACC 1 cut(s) 817
BstUI CGCG 6 cut(s) 111, 493, 1139, 1172, 1664, 1700
BstV1I GCAGC 4 cut(s) 118, 576, 1479, 1820
BstV2I GAAGAC 3 cut(s) 153, 234, 1336
BstX2I RGATCY 2 cut(s) 277, 903
BstXI CCANNNNNNTGG 1 cut(s) 1237
BstYI RGATCY 2 cut(s) 277, 903
BstZI CGGCCG 3 cut(s) 414, 1307, 1799
Bsu15I ATCGAT 2 cut(s) 441, 1062
BsuI GTATCC 1 cut(s) 247
BsuTUI ATCGAT 2 cut(s) 441, 1062
BtgI CCRYGG 4 cut(s) 51, 754, 1170, 1398
BtgZI GCGATG 1 cut(s) 1792
BtsCI GGATG 3 cut(s) 62, 130, 1089
BtsI GCAGTG 1 cut(s) 1649
BtsIMutI CAGTG 1 cut(s) 1649
BveI ACCTGC 2 cut(s) 68, 986
CfoI GCGC 7 cut(s) 111, 352, 773, 789, 857, 1642, 1729
Cfr10I RCCGGY 4 cut(s) 851, 1093, 1476, 1736
Cfr42I CCGCGG 1 cut(s) 1173
ClaI ATCGAT 2 cut(s) 441, 1062
CpoI CGGWCCG 2 cut(s) 1460, 1612
CseI GACGC 4 cut(s) 730, 1642, 1653, 1670
Csp6I GTAC 3 cut(s) 1249, 1567, 1750
CspAI ACCGGT 1 cut(s) 1476
CspCI CAANNNNNGTGG 2 cut(s) 1495, 1530
CspI CGGWCCG 2 cut(s) 1460, 1612
CviQI GTAC 3 cut(s) 1249, 1567, 1750
DdeI CTNAG 3 cut(s) 485, 807, 921
DinI GGCGCC 1 cut(s) 351
DpnI GATC 7 cut(s) 279, 453, 827, 905, 932, 1281, 1382
DpnII GATC 7 cut(s) 277, 451, 825, 903, 930, 1279, 1380
DriI GACNNNNNGTC 1 cut(s) 514
EaeI YGGCCR 5 cut(s) 171, 414, 1091, 1307, 1799
EagI CGGCCG 3 cut(s) 414, 1307, 1799
Eam1104I CTCTTC 2 cut(s) 198, 1736
Eam1105I GACNNNNNGTC 1 cut(s) 514
EarI CTCTTC 2 cut(s) 198, 1736
EciI GGCGGA 3 cut(s) 309, 1663, 1755
Ecl136II GAGCTC 2 cut(s) 532, 1303
EclXI CGGCCG 3 cut(s) 414, 1307, 1799
Eco130I CCWWGG 1 cut(s) 51
Eco24I GRGCYC 3 cut(s) 237, 534, 1305
Eco31I GGTCTC 1 cut(s) 968
Eco47I GGWCC 6 cut(s) 1183, 1460, 1474, 1607, 1612, 1650
Eco52I CGGCCG 3 cut(s) 414, 1307, 1799
Eco53kI GAGCTC 2 cut(s) 532, 1303
Eco57I CTGAAG 2 cut(s) 609, 1175
Eco91I GGTNACC 1 cut(s) 817
EcoICRI GAGCTC 2 cut(s) 532, 1303
EcoNI CCTNNNNNAGG 1 cut(s) 806
EcoO109I RGGNCCY 2 cut(s) 811, 1108
EcoO65I GGTNACC 1 cut(s) 817
EcoRII CCWGG 5 cut(s) 544, 813, 1470, 1542, 1820
EcoT14I CCWWGG 1 cut(s) 51
EcoT38I GRGCYC 3 cut(s) 237, 534, 1305
EgeI GGCGCC 1 cut(s) 351
EheI GGCGCC 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 51
Esp3I CGTCTC 3 cut(s) 669, 685, 1625
FalI AAGNNNNNCTT 2 cut(s) 1568, 1600
FaqI GGGAC 2 cut(s) 229, 1620
FauI CCCGC 5 cut(s) 498, 1140, 1144, 1170, 1174
FblI GTMKAC 3 cut(s) 284, 723, 915
FokI GGATG 3 cut(s) 49, 137, 1096
FriOI GRGCYC 3 cut(s) 237, 534, 1305
FspBI CTAG 3 cut(s) 893, 1220, 1283
GlaI GCGC 7 cut(s) 110, 351, 772, 788, 856, 1641, 1728
GsaI CCCAGC 4 cut(s) 146, 244, 901, 1219
GsuI CTGGAG 4 cut(s) 314, 941, 1319, 1544
HaeII RGCGCY 3 cut(s) 353, 858, 1730
HgaI GACGC 4 cut(s) 730, 1642, 1653, 1670
HhaI GCGC 7 cut(s) 111, 352, 773, 789, 857, 1642, 1729
Hin1I GRCGYC 2 cut(s) 350, 741
Hin6I GCGC 7 cut(s) 109, 350, 771, 787, 855, 1640, 1727
HinP1I GCGC 7 cut(s) 109, 350, 771, 787, 855, 1640, 1727
HincII GTYRAC 4 cut(s) 285, 702, 724, 1537
HindII GTYRAC 4 cut(s) 285, 702, 724, 1537
HphI GGTGA 5 cut(s) 166, 359, 811, 1345, 1414
Hpy166II GTNNAC 8 cut(s) 285, 702, 724, 754, 916, 1336, 1537, 1567
Hpy188III TCNNGA 6 cut(s) 224, 958, 1025, 1037, 1193, 1283
Hpy8I GTNNAC 8 cut(s) 285, 702, 724, 754, 916, 1336, 1537, 1567
Hpy99I CGWCG 5 cut(s) 116, 119, 680, 1664, 1772
HpyAV CCTTC 4 cut(s) 57, 624, 886, 1022
HpyCH4III ACNGT 4 cut(s) 220, 259, 1432, 1460
HpyCH4V TGCA 4 cut(s) 964, 1087, 1105, 1495
HpyF3I CTNAG 3 cut(s) 485, 807, 921
Hsp92I GRCGYC 2 cut(s) 350, 741
HspAI GCGC 7 cut(s) 109, 350, 771, 787, 855, 1640, 1727
KasI GGCGCC 1 cut(s) 349
KroI GCCGGC 3 cut(s) 851, 1093, 1736
KroNI GCCGGC 3 cut(s) 853, 1095, 1738
KspI CCGCGG 1 cut(s) 1173
Kzo9I GATC 7 cut(s) 277, 451, 825, 903, 930, 1279, 1380
LguI GCTCTTC 1 cut(s) 1736
LmnI GCTCC 7 cut(s) 415, 960, 1300, 1308, 1438, 1681, 1841
Lsp1109I GCAGC 4 cut(s) 118, 576, 1479, 1820
LweI GCATC 4 cut(s) 942, 951, 1074, 1276
MaeI CTAG 3 cut(s) 893, 1220, 1283
MaeIII GTNAC 3 cut(s) 817, 1426, 1846
MalI GATC 7 cut(s) 279, 453, 827, 905, 932, 1281, 1382
MbiI CCGCTC 2 cut(s) 1624, 1804
MboI GATC 7 cut(s) 277, 451, 825, 903, 930, 1279, 1380
MflI RGATCY 2 cut(s) 277, 903
MhlI GDGCHC 3 cut(s) 237, 534, 1305
MluCI AATT 5 cut(s) 328, 523, 793, 992, 1241
MluI ACGCGT 2 cut(s) 1662, 1698
Mly113I GGCGCC 1 cut(s) 350
MlyI GAGTC 9 cut(s) 95, 428, 707, 719, 741, 1059, 1331, 1496, 1511
MmeI TCCRAC 5 cut(s) 189, 694, 1144, 1539, 1719
MreI CGCCGGCG 1 cut(s) 1736
MroNI GCCGGC 3 cut(s) 851, 1093, 1736
MroXI GAANNNNTTC 2 cut(s) 1032, 1230
MseI TTAA 1 cut(s) 1148
MslI CAYNNNNRTG 1 cut(s) 1235
MspA1I CMGCKG 4 cut(s) 244, 361, 901, 1172
MvaI CCWGG 5 cut(s) 546, 815, 1472, 1544, 1822
MvnI CGCG 6 cut(s) 111, 493, 1139, 1172, 1664, 1700
NaeI GCCGGC 3 cut(s) 853, 1095, 1738
NarI GGCGCC 1 cut(s) 350
NciI CCSGG 5 cut(s) 710, 1125, 1374, 1616, 1654
NcoI CCATGG 1 cut(s) 51
NdeII GATC 7 cut(s) 277, 451, 825, 903, 930, 1279, 1380
NgoMIV GCCGGC 3 cut(s) 851, 1093, 1736
NheI GCTAGC 1 cut(s) 1219
NlaIV GGNNCC 5 cut(s) 351, 411, 1608, 1652, 1693
NmeAIII GCCGAG 7 cut(s) 442, 910, 1335, 1348, 1777, 1796, 1809
NmuCI GTSAC 3 cut(s) 817, 1426, 1846
NspI RCATGY 2 cut(s) 1602, 1720
PaeI GCATGC 1 cut(s) 1720
PciSI GCTCTTC 1 cut(s) 1736
PcsI WCGNNNNNNNCGW 3 cut(s) 281, 447, 1626
PdiI GCCGGC 3 cut(s) 853, 1095, 1738
PdmI GAANNNNTTC 2 cut(s) 1032, 1230
PfeI GAWTC 5 cut(s) 364, 398, 581, 1075, 1155
PflFI GACNNNGTC 1 cut(s) 1616
PfoI TCCNGGA 1 cut(s) 1470
PinAI ACCGGT 1 cut(s) 1476
Ple19I CGATCG 2 cut(s) 933, 1383
PleI GAGTC 9 cut(s) 95, 427, 706, 719, 741, 1058, 1330, 1495, 1511
PluTI GGCGCC 1 cut(s) 353
PpsI GAGTC 9 cut(s) 95, 427, 706, 719, 741, 1058, 1330, 1495, 1511
Psp124BI GAGCTC 2 cut(s) 534, 1305
Psp6I CCWGG 5 cut(s) 544, 813, 1470, 1542, 1820
PspEI GGTNACC 1 cut(s) 817
PspFI CCCAGC 4 cut(s) 142, 240, 897, 1215
PspGI CCWGG 5 cut(s) 544, 813, 1470, 1542, 1820
PspN4I GGNNCC 5 cut(s) 351, 411, 1608, 1652, 1693
PsuI RGATCY 2 cut(s) 277, 903
PsyI GACNNNGTC 1 cut(s) 1616
PvuI CGATCG 2 cut(s) 933, 1383
PvuII CAGCTG 1 cut(s) 244
RsaI GTAC 3 cut(s) 1250, 1568, 1751
RsaNI GTAC 3 cut(s) 1249, 1567, 1750
RseI CAYNNNNRTG 1 cut(s) 1235
Rsr2I CGGWCCG 2 cut(s) 1460, 1612
RsrII CGGWCCG 2 cut(s) 1460, 1612
SacI GAGCTC 2 cut(s) 534, 1305
SacII CCGCGG 1 cut(s) 1173
SalI GTCGAC 2 cut(s) 283, 722
SapI GCTCTTC 1 cut(s) 1736
SaqAI TTAA 1 cut(s) 1148
Sau3AI GATC 7 cut(s) 277, 451, 825, 903, 930, 1279, 1380
SchI GAGTC 9 cut(s) 95, 428, 707, 719, 741, 1059, 1331, 1496, 1511
SduI GDGCHC 3 cut(s) 237, 534, 1305
SfaNI GCATC 4 cut(s) 942, 951, 1074, 1276
SfiI GGCCNNNNNGGCC 1 cut(s) 179
SfoI GGCGCC 1 cut(s) 351
Sfr303I CCGCGG 1 cut(s) 1173
SgrAI CRCCGGYG 1 cut(s) 1736
SgrBI CCGCGG 1 cut(s) 1173
SinI GGWCC 6 cut(s) 1183, 1460, 1474, 1607, 1612, 1650
SmiMI CAYNNNNRTG 1 cut(s) 1235
SmlI CTYRAG 1 cut(s) 533
SmoI CTYRAG 1 cut(s) 533
SphI GCATGC 1 cut(s) 1720
Sse9I AATT 5 cut(s) 328, 523, 793, 992, 1241
SspDI GGCGCC 1 cut(s) 349
SspMI CTAG 3 cut(s) 893, 1220, 1283
SstI GAGCTC 2 cut(s) 534, 1305
StyI CCWWGG 1 cut(s) 51
TaaI ACNGT 4 cut(s) 220, 259, 1432, 1460
TaqII GACCGA 1 cut(s) 1522
TasI AATT 5 cut(s) 328, 523, 793, 992, 1241
TatI WGTACW 2 cut(s) 1248, 1566
TauI GCSGC 7 cut(s) 89, 350, 361, 1131, 1172, 1627, 1804
TfiI GAWTC 5 cut(s) 364, 398, 581, 1075, 1155
Tru1I TTAA 1 cut(s) 1148
Tru9I TTAA 1 cut(s) 1148
TscAI CASTG 1 cut(s) 1649
TseFI GTSAC 3 cut(s) 817, 1426, 1846
TseI GCWGC 4 cut(s) 106, 564, 1492, 1833
Tsp45I GTSAC 3 cut(s) 817, 1426, 1846
TspDTI ATGAA 8 cut(s) 17, 199, 251, 479, 1088, 1223, 1427, 1673
TspGWI ACGGA 2 cut(s) 1330, 1387
TspRI CASTG 1 cut(s) 1649
Tth111I GACNNNGTC 1 cut(s) 1616
VpaK11BI GGWCC 6 cut(s) 1183, 1460, 1474, 1607, 1612, 1650
XagI CCTNNNNNAGG 1 cut(s) 806
XapI RAATTY 4 cut(s) 328, 793, 992, 1241
XbaI TCTAGA 1 cut(s) 1282
XceI RCATGY 2 cut(s) 1602, 1720
XcmI CCANNNNNNNNNTGG 1 cut(s) 1720
XmiI GTMKAC 3 cut(s) 284, 723, 915
XmnI GAANNNNTTC 2 cut(s) 1032, 1230
XspI CTAG 3 cut(s) 893, 1220, 1283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.