Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009143

Physical Location & Seq

Genomic Coordinates Reverse (-)

5206002 .. 5209979

Gene Structure 3978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G15130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGGCTTCTTCTTCGCTCTCTAATCTGATGCTCGCCATTCATGAGAAGAAGACGAGCTCCGTTGATCTCTACCGTCCTCTCCGCAACTACGTTACTTTCACCTACTCTGAGCGCGAGGCTCAGCTTATAGACGACGATCTCGAGACCTTGAAGCAGCTCCGATCCGATATAGAACGCGTTTCCGATCCTTCTCCAGCTGCTCGGCGAGACCTTCTCATCTCCTATTACAAAGTTCTTTGTCTTGTGGAGACGCGATTTCCAATTTCCCCTGACAAGGATCATGTCAACGCCGTCTCTTTCGTATGGTACGATGCTTTCAAGCAAAAGCATAAAGCTACTCAGCAGAACATTCATTTGGAGAAAGCAGCTGTTCTATTCAATCTTGGTGCTAGCTACAGCCAGATTGGACTCGGTCATGACCGCACCACCGTCGATGGGCGTCGTCAGGCTTCACATGCGTTCATGGCTGCAGCAGGGGCGTTCGCTCACTTGAGGGATAACGAGTCCATTAAGGCGACGATCGGGCCGAGCACTACCGTGGATGTGTCGGTTGAGTGTGTTGGAATGTTGGAACGGTTGATGGTGGCGCAGGCGCAGGAATGTGTCTTTGAAAATACCATTGCTAAAGGAAGTACTCCTGGTGTCTCTGCTAAAATTGCTAGGCAGGTTGGCATATTTTATGAGGAGGCTTTATCTGCGCTAATCATTTCGCCATTGAAGGATCATTTCGACAAAGGCTGGATTTCTCATGTGCAGCTGAAAGCAGCACTCTTCTATGGTGAAGCTTGCTTTAGATATGGAAAAGAGTTGCACGAGAAAGAGGAAATTGCAGAAGAAATTGCACGGCTGAGGAGTGGAGCCAGCCGTTTGGCAGAAGCAAAGAAGTCTTCAAGGGGAGCTCCTGCTCAGCTTATAGAAGCGATGAACACACTAGAGTCTAGCATTAATGGCAATTTGGATAGGGCTGTCAAGGAAAACGACAGAGTGTACCTCATGAGAGTTCCTTCTCCTTCTTCTTTGTCTCCACTTCCCGCCTTCTCAATGGTTAAGCCAATGAACATGACTGATATTTTGGATGCAAGCAAGGAAAAAATGTTTTCAATCCTTGTTCCAGACAGCAGTGCAAAGGCTCTCTCTAGATACACTGAGATGGTCGATGATGTAATTAGAACTCAGGCGGAGAGATTACAGCAAGCTAGCGAACTAACTCGAGTTAGGCTCAAAGAGATGGATCTTCCAGATTCTATTCTCGCTGTGGATGGTAATTCAGCTCTTCCTGTTGATCTTAAAGAAGATGTAGAAGCTGTTCAGATCAGTGGTGGTCCAGCTGGCTTGGAAGCTGAACTGCAGCAACTTAGAGATTTGAAGAGGGTTAATCAGGAACTGTTGGTGCACACTGAAGAGCTTTTGCAGAAAGAAGCAACTGAAGATTCTCAGTTCAGAAGTCAATTTGGGACTCGGTGGACTAGGCCTCAATCTAGCACACTGACAAAGAACTTGCAGGATAGGCTAAATCGGTTTGCAGCCAATTTGAAACAAGCTGGCGAAAGTGATGTTAAGATTGAGCGATCAGTGAGAGATAACTCCGCCCTCATGTCTATTCTTGATCGACGGCCGATAGAGTCTGCTGTCCCAACTCTTGCTAGGCCAATAATGTCTCTGGACGCAACAGAGGATGCTATTGTGGGAACTTTGAAGCAGAGTCTGAGGCAACTGGAAAATCTTGGTGCTCAGCGGGCAGGTCTTGAAGACATGCTCAAAGAGATGAAGAGAAAGGATGACATACTGCCAAAGCTGATGACCATAACAGGCTCCTATGAAGATATGTTCAGGAAAGAGATATCAAAGTATGACCACATTTGTGAAGATATTTCCCAAAACATTGAAGTTCAAGAACAATTATTGATGCAAATTCAGGCTCAAAATGAAGAGTTTTCAACTATTTTCAATCTTGAAGATTATAAAGCATCCAAGGAGAAGTGCTACAAGCAGATTCAAGCTGCAATAATGAAGTATCGAGAGATCAAGGAGAACATCAATGAGGGCCTGAAGTTCTATGTCACTCTCCAAGATGCAATCACGAATGTGAAGCAGCAGTGCAGTGATTTTGTGATGACAAGGAGTATCCAGTGCCGAGATATGATTGAAGATGTGCAACGACAGATGTCTGGTTTGAGTTTTCAGGATCATAGAAGCTCCGGCCCATACCCATCTGTGCATCAACCAACGGCTTCAAGTCCGCCTCCTCCACCAGAAACTCAGAATCCATCTCATCCTCACCCACATGCACCATACTATAGACCGCCTGAGCAGATGTCAAGGCCTGGCTACTCTATCCCACCCTACGGTCCACCTCCCCCATACCATACTCCTCATGGCCAGGCGCCACAACCATACCCTCCTCAGGCACAGCAACAGCCTCATCCATCATGGCAACAAGGCTCTTACTATGATCCGCAGGGACAGCAGCCTCGGCCTCCTTATCCCGGCCAGAGCCCATACCAACCTCCTCACCAAGGTGGAGGATACTACAGGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005829 GO:0005911 GO:0006996 GO:0007032 GO:0007033 GO:0007275 GO:0008150 GO:0009506 GO:0009653 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016050 GO:0022603 GO:0030054 GO:0031156 GO:0031285 GO:0031286 GO:0031410 GO:0031982 GO:0032101 GO:0032102 GO:0032104 GO:0032105 GO:0032107 GO:0032108 GO:0032182 GO:0032501 GO:0032502 GO:0036257 GO:0042173 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0043621 GO:0043900 GO:0043901 GO:0043937 GO:0043938 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045881 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051241 GO:0055044 GO:0065007 GO:0071840 GO:0075260 GO:0075262 GO:0097708 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

ALIX_LYPXL_bnd BRO1

Protein Analysis

846

Amino Acids

95.21

Weight (kDa)

6.02

Isoelectric Point (pI)

59.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRO1	PF03097	10 - 388	7.5e-107	BRO1-like domain
ALIX_LYPXL_bnd	PF13949	425 - 709	3.3e-73	ALIX V-shaped domain binding to HIV

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15130
fragaria_vesca	FvH4_4g26260 FvH4_4g26260
malus_domestica	MD13G1031100.v1.1 MD16G1033300.v1.1
prunus_persica	Prupe.1G321000_v2.0.a1 Prupe.1G321000_v2.0.a1
pyrus_communis	pycom13g02720 pycom16g02790
rosa_chinensis	RchiOBHm_Chr4g0433861
rosa_laevigata	RLG00000006722
rosa_multiflora	Rmu_co8294453.1_g000001 Rmu_sc0000352.1_g000001 Rmu_ssc0000164.1_g000001
rosa_roxburghii	Rroxscaffold_5G00375260
rosa_rugosa	Rorug04G0271800 Rorug04G0271900
rosa_samantha	Rh4AG326600 Rh4BG334000 Rh4CG349700 Rh4DG330800
rosa_wichuraiana	Rw4G028310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1962
Acc36I	ACCTGC	2 cut(s)	655, 1730
AccB1I	GGYRCC	1 cut(s)	2383
AccII	CGCG	3 cut(s)	114, 177, 253
AciI	CCGC	9 cut(s)	82, 421, 1032, 1178, 1587, 1735, 2240, 2303, 2456
AclWI	GGATC	7 cut(s)	156, 179, 285, 729, 1239, 2193, 2447
AcoI	YGGCCR	3 cut(s)	1613, 2377, 2488
AcsI	RAATTY	1 cut(s)	1911
AcuI	CTGAAG	3 cut(s)	1419, 1446, 2069
AcyI	GRCGYC	2 cut(s)	439, 2384
AfaI	GTAC	3 cut(s)	308, 634, 989
AfiI	CCNNNNNNNGG	6 cut(s)	274, 435, 2345, 2404, 2486, 2516
AflIII	ACRYGT	1 cut(s)	175
AjnI	CCWGG	3 cut(s)	637, 2323, 2379
AjuI	GAANNNNNNNTTGG	2 cut(s)	338, 370
AleI	CACNNNNGTG	4 cut(s)	536, 1860, 2084, 2517
Alw21I	GWGCWC	5 cut(s)	59, 533, 901, 1395, 1732
Alw26I	GTCTC	7 cut(s)	137, 201, 242, 298, 649, 1026, 1662
Alw44I	GTGCAC	1 cut(s)	1391
AlwI	GGATC	7 cut(s)	156, 179, 285, 729, 1239, 2193, 2447
AlwNI	CAGNNNCTG	2 cut(s)	1384, 1705
Ama87I	CYCGRG	2 cut(s)	140, 1209
ApaLI	GTGCAC	1 cut(s)	1391
ApoI	RAATTY	1 cut(s)	1911
ArsI	GACNNNNNNTTYG	2 cut(s)	1054, 1086
AseI	ATTAAT	1 cut(s)	945
Asp700I	GAANNNNTTC	1 cut(s)	1305
AspLEI	GCGC	5 cut(s)	114, 589, 595, 700, 2386
AspS9I	GGNCC	5 cut(s)	524, 1322, 2044, 2201, 2348
AsuC2I	CCSGG	1 cut(s)	2487
AsuHPI	GGTGA	4 cut(s)	91, 791, 2270, 2504
AsuNHI	GCTAGC	2 cut(s)	389, 1196
AvaI	CYCGRG	2 cut(s)	140, 1209
AvaII	GGWCC	2 cut(s)	1322, 2348
AxyI	CCTNAGG	1 cut(s)	2403
BaeGI	GKGCMC	1 cut(s)	1395
BalI	TGGCCA	1 cut(s)	2379
BanI	GGYRCC	1 cut(s)	2383
BanII	GRGCYC	3 cut(s)	59, 901, 2498
BauI	CACGAG	1 cut(s)	812
BbsI	GAAGAC	3 cut(s)	56, 879, 1755
Bbv12I	GWGCWC	5 cut(s)	59, 533, 901, 1395, 1732
BbvCI	CCTCAGC	1 cut(s)	848
BccI	CCATC	8 cut(s)	428, 574, 1144, 1222, 1253, 2218, 2275, 2434
BceAI	ACGGC	5 cut(s)	275, 849, 860, 1628, 2244
BcgI	CGANNNNNNTGC	2 cut(s)	412, 446
BciT130I	CCWGG	3 cut(s)	639, 2325, 2381
BciVI	GTATCC	2 cut(s)	2135, 2519
BcnI	CCSGG	1 cut(s)	2487
BcoDI	GTCTC	7 cut(s)	137, 201, 242, 298, 649, 1026, 1662
BfaI	CTAG	9 cut(s)	390, 660, 932, 939, 1137, 1197, 1467, 1479, 1644
BfmI	CTRYAG	5 cut(s)	394, 468, 1346, 2296, 2530
BfoI	RGCGCY	1 cut(s)	2387
BfuAI	ACCTGC	2 cut(s)	655, 1730
BfuI	GTATCC	2 cut(s)	2135, 2519
BlpI	GCTNAGC	3 cut(s)	120, 906, 1731
BmcAI	AGTACT	1 cut(s)	634
Bme1390I	CCNGG	4 cut(s)	639, 2325, 2381, 2487
Bme18I	GGWCC	2 cut(s)	1322, 2348
BmeT110I	CYCGRG	2 cut(s)	140, 1209
BmgT120I	GGNCC	5 cut(s)	524, 1322, 2044, 2201, 2348
BmiI	GGNNCC	3 cut(s)	859, 1813, 2385
BmrFI	CCNGG	4 cut(s)	639, 2325, 2381, 2487
BmsI	GCATC	8 cut(s)	18, 301, 1066, 1666, 1896, 1976, 2062, 2227
BmtI	GCTAGC	2 cut(s)	393, 1200
BoxI	GACNNNNGTC	1 cut(s)	2164
BpiI	GAAGAC	3 cut(s)	56, 879, 1755
BplI	GAGNNNNNCTC	6 cut(s)	198, 230, 975, 1007, 1203, 1235
BpmI	CTGGAG	1 cut(s)	177
Bpu10I	CCTNAGC	2 cut(s)	848, 2307
Bpu1102I	GCTNAGC	3 cut(s)	120, 906, 1731
BpuEI	CTTGAG	1 cut(s)	511
BpuMI	CCSGG	1 cut(s)	2487
BsaHI	GRCGYC	2 cut(s)	439, 2384
BsaI	GGTCTC	2 cut(s)	137, 201
BsaJI	CCNNGG	4 cut(s)	537, 1971, 2471, 2515
Bsc4I	CCNNNNNNNGG	6 cut(s)	274, 435, 2345, 2404, 2486, 2516
Bse1I	ACTGG	2 cut(s)	1719, 2128
Bse21I	CCTNAGG	1 cut(s)	2403
Bse3DI	GCAATG	1 cut(s)	618
BseBI	CCWGG	3 cut(s)	639, 2325, 2381
BseDI	CCNNGG	4 cut(s)	537, 1971, 2471, 2515
BseGI	GGATG	8 cut(s)	547, 1081, 1264, 1681, 1783, 1967, 2272, 2422
BseLI	CCNNNNNNNGG	6 cut(s)	274, 435, 2345, 2404, 2486, 2516
BseMI	GCAATG	1 cut(s)	618
BseNI	ACTGG	2 cut(s)	1719, 2128
BseRI	GAGGAG	6 cut(s)	698, 865, 2235, 2361, 2391, 2499
BseSI	GKGCMC	1 cut(s)	1395
BseX3I	CGGCCG	1 cut(s)	1613
BsgI	GTGCAG	2 cut(s)	773, 2119
Bsh1236I	CGCG	3 cut(s)	114, 177, 253
Bsh1285I	CGRYCG	2 cut(s)	522, 1616
BshNI	GGYRCC	1 cut(s)	2383
BsiEI	CGRYCG	2 cut(s)	522, 1616
BsiHKAI	GWGCWC	5 cut(s)	59, 533, 901, 1395, 1732
BsiHKCI	CYCGRG	2 cut(s)	140, 1209
BsiSI	CCGG	2 cut(s)	2199, 2487
BslFI	GGGAC	3 cut(s)	1468, 1616, 2475
BslI	CCNNNNNNNGG	6 cut(s)	274, 435, 2345, 2404, 2486, 2516
BsmAI	GTCTC	7 cut(s)	137, 201, 242, 298, 649, 1026, 1662
BsmBI	CGTCTC	2 cut(s)	242, 298
BsmFI	GGGAC	3 cut(s)	1468, 1616, 2475
Bso31I	GGTCTC	2 cut(s)	137, 201
BsoBI	CYCGRG	2 cut(s)	140, 1209
Bsp1286I	GDGCHC	6 cut(s)	59, 533, 901, 1395, 1732, 2498
Bsp1720I	GCTNAGC	3 cut(s)	120, 906, 1731
BspACI	CCGC	9 cut(s)	82, 421, 1032, 1178, 1587, 1735, 2240, 2303, 2456
BspFNI	CGCG	3 cut(s)	114, 177, 253
BspHI	TCATGA	3 cut(s)	40, 415, 993
BspLI	GGNNCC	3 cut(s)	859, 1813, 2385
BspMAI	CTGCAG	2 cut(s)	472, 1350
BspMI	ACCTGC	2 cut(s)	655, 1730
BspOI	GCTAGC	2 cut(s)	393, 1200
BspPI	GGATC	7 cut(s)	156, 179, 285, 729, 1239, 2193, 2447
BspQI	GCTCTTC	2 cut(s)	1278, 1395
BspT107I	GGYRCC	1 cut(s)	2383
BspTNI	GGTCTC	2 cut(s)	137, 201
BsrDI	GCAATG	1 cut(s)	618
BsrI	ACTGG	2 cut(s)	1719, 2128
BssECI	CCNNGG	4 cut(s)	537, 1971, 2471, 2515
BssNI	GRCGYC	2 cut(s)	439, 2384
BssSI	CACGAG	1 cut(s)	812
BssT1I	CCWWGG	2 cut(s)	1971, 2515
Bst2BI	CACGAG	1 cut(s)	812
Bst2UI	CCWGG	3 cut(s)	639, 2325, 2381
Bst4CI	ACNGT	6 cut(s)	74, 430, 538, 576, 1386, 2348
Bst6I	CTCTTC	6 cut(s)	776, 1278, 1361, 1395, 1763, 1923
BstACI	GRCGYC	2 cut(s)	439, 2384
BstDSI	CCRYGG	1 cut(s)	537
BstENI	CCTNNNNNAGG	1 cut(s)	2514
BstF5I	GGATG	8 cut(s)	547, 1081, 1264, 1681, 1783, 1967, 2272, 2422
BstFNI	CGCG	3 cut(s)	114, 177, 253
BstH2I	RGCGCY	1 cut(s)	2387
BstHHI	GCGC	5 cut(s)	114, 589, 595, 700, 2386
BstMAI	GTCTC	7 cut(s)	137, 201, 242, 298, 649, 1026, 1662
BstMCI	CGRYCG	2 cut(s)	522, 1616
BstNI	CCWGG	3 cut(s)	639, 2325, 2381
BstNSI	RCATGY	3 cut(s)	458, 1756, 2288
BstPAI	GACNNNNGTC	1 cut(s)	2164
BstSCI	CCNGG	4 cut(s)	637, 2323, 2379, 2485
BstSFI	CTRYAG	5 cut(s)	394, 468, 1346, 2296, 2530
BstSLI	GKGCMC	1 cut(s)	1395
BstUI	CGCG	3 cut(s)	114, 177, 253
BstV2I	GAAGAC	3 cut(s)	56, 879, 1755
BstX2I	RGATCY	1 cut(s)	1231
BstXI	CCANNNNNNTGG	1 cut(s)	868
BstYI	RGATCY	1 cut(s)	1231
BstZI	CGGCCG	1 cut(s)	1613
Bsu36I	CCTNAGG	1 cut(s)	2403
BsuI	GTATCC	2 cut(s)	2135, 2519
BtgI	CCRYGG	1 cut(s)	537
BtgZI	GCGATG	1 cut(s)	935
BtsCI	GGATG	8 cut(s)	547, 1081, 1264, 1681, 1783, 1967, 2272, 2422
BtsI	GCAGTG	3 cut(s)	1126, 2102, 2107
BtsIMutI	CAGTG	9 cut(s)	1126, 1143, 1321, 1395, 1484, 1578, 2102, 2107, 2135
BveI	ACCTGC	2 cut(s)	655, 1730
CaiI	CAGNNNCTG	2 cut(s)	1384, 1705
CciI	TCATGA	3 cut(s)	40, 415, 993
CfoI	GCGC	5 cut(s)	114, 589, 595, 700, 2386
Cfr13I	GGNCC	5 cut(s)	524, 1322, 2044, 2201, 2348
CseI	GACGC	3 cut(s)	259, 428, 1673
Csp6I	GTAC	3 cut(s)	307, 633, 988
CviQI	GTAC	3 cut(s)	307, 633, 988
DinI	GGCGCC	1 cut(s)	2385
EaeI	YGGCCR	3 cut(s)	1613, 2377, 2488
EagI	CGGCCG	1 cut(s)	1613
Eam1104I	CTCTTC	6 cut(s)	776, 1278, 1361, 1395, 1763, 1923
EarI	CTCTTC	6 cut(s)	776, 1278, 1361, 1395, 1763, 1923
EciI	GGCGGA	3 cut(s)	1193, 1576, 2229
Ecl136II	GAGCTC	2 cut(s)	57, 899
EclXI	CGGCCG	1 cut(s)	1613
Eco130I	CCWWGG	2 cut(s)	1971, 2515
Eco147I	AGGCCT	2 cut(s)	1471, 2323
Eco24I	GRGCYC	3 cut(s)	59, 901, 2498
Eco31I	GGTCTC	2 cut(s)	137, 201
Eco32I	GATATC	1 cut(s)	1842
Eco47I	GGWCC	2 cut(s)	1322, 2348
Eco52I	CGGCCG	1 cut(s)	1613
Eco53kI	GAGCTC	2 cut(s)	57, 899
Eco57I	CTGAAG	3 cut(s)	1419, 1446, 2069
Eco81I	CCTNAGG	1 cut(s)	2403
Eco88I	CYCGRG	2 cut(s)	140, 1209
EcoICRI	GAGCTC	2 cut(s)	57, 899
EcoNI	CCTNNNNNAGG	1 cut(s)	2514
EcoO109I	RGGNCCY	1 cut(s)	2044
EcoRII	CCWGG	3 cut(s)	637, 2323, 2379
EcoRV	GATATC	1 cut(s)	1842
EcoT14I	CCWWGG	2 cut(s)	1971, 2515
EcoT38I	GRGCYC	3 cut(s)	59, 901, 2498
EgeI	GGCGCC	1 cut(s)	2385
EheI	GGCGCC	1 cut(s)	2385
ErhI	CCWWGG	2 cut(s)	1971, 2515
Esp3I	CGTCTC	2 cut(s)	242, 298
FaqI	GGGAC	3 cut(s)	1468, 1616, 2475
FauI	CCCGC	2 cut(s)	1039, 1728
FokI	GGATG	8 cut(s)	554, 1088, 1271, 1688, 1790, 1954, 2259, 2409
FriOI	GRGCYC	3 cut(s)	59, 901, 2498
FspBI	CTAG	9 cut(s)	390, 660, 932, 939, 1137, 1197, 1467, 1479, 1644
GlaI	GCGC	5 cut(s)	113, 588, 594, 699, 2385
GsuI	CTGGAG	1 cut(s)	177
HaeII	RGCGCY	1 cut(s)	2387
HapII	CCGG	2 cut(s)	2199, 2487
HgaI	GACGC	3 cut(s)	259, 428, 1673
HhaI	GCGC	5 cut(s)	114, 589, 595, 700, 2386
Hin1I	GRCGYC	2 cut(s)	439, 2384
Hin6I	GCGC	5 cut(s)	112, 587, 593, 698, 2384
HinP1I	GCGC	5 cut(s)	112, 587, 593, 698, 2384
HincII	GTYRAC	1 cut(s)	286
HindII	GTYRAC	1 cut(s)	286
HindIII	AAGCTT	1 cut(s)	783
HpaII	CCGG	2 cut(s)	2199, 2487
HphI	GGTGA	4 cut(s)	91, 791, 2270, 2504
Hpy166II	GTNNAC	5 cut(s)	286, 988, 1393, 1464, 2351
Hpy188I	TCNGA	9 cut(s)	27, 109, 161, 166, 184, 1311, 1442, 1707, 2262
Hpy8I	GTNNAC	5 cut(s)	286, 988, 1393, 1464, 2351
Hpy99I	CGWCG	5 cut(s)	137, 434, 444, 520, 1614
HpyAV	CCTTC	6 cut(s)	198, 221, 712, 1014, 1020, 1045
HpyCH4III	ACNGT	6 cut(s)	74, 430, 538, 576, 1386, 2348
HpyCH4IV	ACGT	1 cut(s)	90
HpySE526I	ACGT	1 cut(s)	90
Hsp92I	GRCGYC	2 cut(s)	439, 2384
HspAI	GCGC	5 cut(s)	112, 587, 593, 698, 2384
KasI	GGCGCC	1 cut(s)	2383
LguI	GCTCTTC	2 cut(s)	1278, 1395
LmnI	GCTCC	7 cut(s)	62, 162, 857, 896, 904, 1817, 2201
LweI	GCATC	8 cut(s)	18, 301, 1066, 1666, 1896, 1976, 2062, 2227
MaeI	CTAG	9 cut(s)	390, 660, 932, 939, 1137, 1197, 1467, 1479, 1644
MaeII	ACGT	1 cut(s)	90
MaeIII	GTNAC	2 cut(s)	91, 2059
MflI	RGATCY	1 cut(s)	1231
MhlI	GDGCHC	6 cut(s)	59, 533, 901, 1395, 1732, 2498
MlsI	TGGCCA	1 cut(s)	2379
MluI	ACGCGT	1 cut(s)	175
MluNI	TGGCCA	1 cut(s)	2379
Mly113I	GGCGCC	1 cut(s)	2384
MlyI	GAGTC	6 cut(s)	402, 512, 944, 1450, 1631, 1711
MmeI	TCCRAC	2 cut(s)	541, 549
Mox20I	TGGCCA	1 cut(s)	2379
MroXI	GAANNNNTTC	1 cut(s)	1305
MscI	TGGCCA	1 cut(s)	2379
MseI	TTAA	6 cut(s)	510, 945, 1047, 1287, 1374, 1557
MslI	CAYNNNNRTG	6 cut(s)	536, 1148, 1860, 2084, 2283, 2517
Msp20I	TGGCCA	1 cut(s)	2379
MspA1I	CMGCKG	5 cut(s)	197, 368, 757, 1328, 1735
MspI	CCGG	2 cut(s)	2199, 2487
MspR9I	CCNGG	4 cut(s)	639, 2325, 2381, 2487
MvaI	CCWGG	3 cut(s)	639, 2325, 2381
MvnI	CGCG	3 cut(s)	114, 177, 253
NarI	GGCGCC	1 cut(s)	2384
NciI	CCSGG	1 cut(s)	2487
NheI	GCTAGC	2 cut(s)	389, 1196
NlaIV	GGNNCC	3 cut(s)	859, 1813, 2385
NmeAIII	GCCGAG	4 cut(s)	181, 552, 2159, 2452
NmuCI	GTSAC	1 cut(s)	2059
NspI	RCATGY	3 cut(s)	458, 1756, 2288
OliI	CACNNNNGTG	4 cut(s)	536, 1860, 2084, 2517
PaeR7I	CTCGAG	2 cut(s)	140, 1209
PagI	TCATGA	3 cut(s)	40, 415, 993
PceI	AGGCCT	2 cut(s)	1471, 2323
PciSI	GCTCTTC	2 cut(s)	1278, 1395
PcsI	WCGNNNNNNNCGW	3 cut(s)	138, 306, 524
PdmI	GAANNNNTTC	1 cut(s)	1305
PfeI	GAWTC	4 cut(s)	1241, 1430, 1993, 2263
PflFI	GACNNNGTC	1 cut(s)	411
Ple19I	CGATCG	1 cut(s)	522
PleI	GAGTC	6 cut(s)	402, 511, 943, 1450, 1630, 1710
PluTI	GGCGCC	1 cut(s)	2387
PpsI	GAGTC	6 cut(s)	402, 511, 943, 1450, 1630, 1710
PshAI	GACNNNNGTC	1 cut(s)	2164
PshBI	ATTAAT	1 cut(s)	945
PsiI	TTATAA	1 cut(s)	1962
Psp124BI	GAGCTC	2 cut(s)	59, 901
Psp6I	CCWGG	3 cut(s)	637, 2323, 2379
PspGI	CCWGG	3 cut(s)	637, 2323, 2379
PspN4I	GGNNCC	3 cut(s)	859, 1813, 2385
PspPI	GGNCC	5 cut(s)	524, 1322, 2044, 2201, 2348
PspXI	VCTCGAGB	1 cut(s)	1209
PsrI	GAACNNNNNNTAC	2 cut(s)	1290, 1322
PstI	CTGCAG	2 cut(s)	472, 1350
PstNI	CAGNNNCTG	2 cut(s)	1384, 1705
PsuI	RGATCY	1 cut(s)	1231
PsyI	GACNNNGTC	1 cut(s)	411
PvuI	CGATCG	1 cut(s)	522
PvuII	CAGCTG	4 cut(s)	197, 368, 757, 1328
RsaI	GTAC	3 cut(s)	308, 634, 989
RsaNI	GTAC	3 cut(s)	307, 633, 988
RseI	CAYNNNNRTG	6 cut(s)	536, 1148, 1860, 2084, 2283, 2517
SacI	GAGCTC	2 cut(s)	59, 901
SapI	GCTCTTC	2 cut(s)	1278, 1395
SaqAI	TTAA	6 cut(s)	510, 945, 1047, 1287, 1374, 1557
Sau96I	GGNCC	5 cut(s)	524, 1322, 2044, 2201, 2348
ScaI	AGTACT	1 cut(s)	634
SchI	GAGTC	6 cut(s)	402, 512, 944, 1450, 1631, 1711
ScrFI	CCNGG	4 cut(s)	639, 2325, 2381, 2487
SduI	GDGCHC	6 cut(s)	59, 533, 901, 1395, 1732, 2498
SfaNI	GCATC	8 cut(s)	18, 301, 1066, 1666, 1896, 1976, 2062, 2227
SfcI	CTRYAG	5 cut(s)	394, 468, 1346, 2296, 2530
SfoI	GGCGCC	1 cut(s)	2385
Sfr274I	CTCGAG	2 cut(s)	140, 1209
SinI	GGWCC	2 cut(s)	1322, 2348
SlaI	CTCGAG	2 cut(s)	140, 1209
SmiMI	CAYNNNNRTG	6 cut(s)	536, 1148, 1860, 2084, 2283, 2517
SmlI	CTYRAG	3 cut(s)	140, 490, 1209
SmoI	CTYRAG	3 cut(s)	140, 490, 1209
SseBI	AGGCCT	2 cut(s)	1471, 2323
SsiI	CCGC	9 cut(s)	82, 421, 1032, 1178, 1587, 1735, 2240, 2303, 2456
SspDI	GGCGCC	1 cut(s)	2383
SspMI	CTAG	9 cut(s)	390, 660, 932, 939, 1137, 1197, 1467, 1479, 1644
SstI	GAGCTC	2 cut(s)	59, 901
StuI	AGGCCT	2 cut(s)	1471, 2323
StyD4I	CCNGG	4 cut(s)	637, 2323, 2379, 2485
StyI	CCWWGG	2 cut(s)	1971, 2515
TaaI	ACNGT	6 cut(s)	74, 430, 538, 576, 1386, 2348
TaiI	ACGT	1 cut(s)	93
TaqI	TCGA	7 cut(s)	141, 432, 729, 1155, 1210, 1609, 2017
TaqII	GACCGA	1 cut(s)	401
TatI	WGTACW	1 cut(s)	632
TfiI	GAWTC	4 cut(s)	1241, 1430, 1993, 2263
Tru1I	TTAA	6 cut(s)	510, 945, 1047, 1287, 1374, 1557
Tru9I	TTAA	6 cut(s)	510, 945, 1047, 1287, 1374, 1557
TscAI	CASTG	9 cut(s)	1126, 1150, 1321, 1402, 1491, 1578, 2102, 2107, 2135
TseFI	GTSAC	1 cut(s)	2059
Tsp45I	GTSAC	1 cut(s)	2059
TspDTI	ATGAA	9 cut(s)	29, 341, 451, 938, 1070, 1781, 1833, 1941, 2024
TspGWI	ACGGA	1 cut(s)	49
TspRI	CASTG	9 cut(s)	1126, 1150, 1321, 1402, 1491, 1578, 2102, 2107, 2135
Tth111I	GACNNNGTC	1 cut(s)	411
VneI	GTGCAC	1 cut(s)	1391
VpaK11BI	GGWCC	2 cut(s)	1322, 2348
VspI	ATTAAT	1 cut(s)	945
XagI	CCTNNNNNAGG	1 cut(s)	2514
XapI	RAATTY	1 cut(s)	1911
XbaI	TCTAGA	1 cut(s)	1136
XceI	RCATGY	3 cut(s)	458, 1756, 2288
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2372
XhoI	CTCGAG	2 cut(s)	140, 1209
XmnI	GAANNNNTTC	1 cut(s)	1305
XspI	CTAG	9 cut(s)	390, 660, 932, 939, 1137, 1197, 1467, 1479, 1644
ZrmI	AGTACT	1 cut(s)	634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.