Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009143

Physical Location & Seq

Genomic Coordinates Forward (+)

30771750 .. 30778449

Gene Structure 6700 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G321000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGGCGTCTTCAGCCTCCACATCAGGCACCGCCACAAACGTCATGCTCGCCATCTTCGAGAAGAAGACGACCCAAATCGATCTCTACCGCCCACTCCGCAACTACATCGCCTTCAACTACTCCGAACGCGAAGCCCAGAACCTCGAAGACGATCTCCAAACGGTGAAACAGCTCCGCTCCGACCTCGAGCGCCAACCCGACCCATCACTCACGACCCGCCGCGACCTCCTCCAAAATTACTACAAAGCCCTCTGCCTCGTCGAGACCCGCTTCCCCATCTCACCCGATAAGGATCATATCAATACCATCACTTTCGTTTGGCAAGACGCCTTCAAAAACAAGCAAAAGGCTTCCCAGCAGAACATCCACTTGGAAAAGGCTGCCGTTTTGTTCAATTTGGGCGCTGTGTATAGTCAGATTGGGCTTTCCTACGATCGCGCCACCGTTGACGGTCGGCGGCTGGCTTCTCACGCGTTTATTGCCTCGGCCGGGGCGTTCGCGTTTTTGCGAGACAATGCGGCGACCAAGGCATCGATTGGGAGCTCGACGACGGTCGATTTGTCGGTGGAGTGTGCTGGGATGTTGGAGAGGTTGATGCTGGCACAGGCGCAGGAGTGCGTCTTTGAGAATACCATAGCCAAAGGGAGCACGCCGGGTGTTTGCGCGAAGATCTCGAGGCAGGTTGGGCTGTATTACGAGGAAGCTTTAGCGGCATGCAATGTTCCGCCTTTAAACCAGCATTTTGACAGGGCCTGGATCTCACACATGCAGTTAAAGGCAGCTCTCTTTTATGCAGAAGCTTGCTATAGGTATGGTCTAGAGCTGCATGAGAAAGAAGAGATTGCAGAAGAAATTGCACGGTTAAAGAGTGGGATCAGTGCTTTATCTGAGGCTAAGAAATCCACAAAAGGGGCTGCTGCACAGATTCTGGATGCAATTAGCAAGTTAGAGGCCAATCTTAACCGTAATCTGGAGAGGGCTGTGAAGGAGAATGATAGAGTTTACCTCATGAGGGTTCCTTCCCCTAGTTCCTTACCACCCCTTCCAGCATTTTCCATGGTGAAGCCTTTGGCGATGAATGAGGTCTTAGATGCGAGCAAGGAGAAGATGTTTGCCAGTCTTGTTCCAGATAGTAGTGCTAAAAATCTTTCCAGATACACTGAAATGGTTGATGACATTATCAGAACACAAGCAGAAAAGTTGCAACAAGCGAGTGAACTGACCAGAGTGAGGCTCAAGGAAATGGACCTTCCAGAGTCTATTCTTGCATTGGAAGGGAATTTTACTCTTCCTACGGATCTTAAAGAAGATGTGGAGGCAGTGCAGATAAGTGGGGGCCCTGCTGGTTTGGAAGCTGAGTTACAGCAGCTTAGGGATTTGAGAAGGGTGAACCAGGAGATTCTGATACACATTGAGGAGCTCTTGCAGAAAGAGGCAAGAGAAGATGCTCAGTTTAAAAGCCAATTTGGAGCCCGATGGACGAGGCCTCAGTCAAGCACTCTTACAAAGAACTTACAGGATAGGCTAAACAGGTTCGCAGCTAACTTGAAGCAAGCTGCGGATAGTGATGCTCGGATTGAGCGCTCAGTCAGAGAGCATTCAGCTCTCATGTCAATCCTTGATCGTCGTCCGATTGAATCTGCCCTCCCAACTCTGGCAAGGCCAATAATGTCTTTGGATGCCAATGAAGATGCTATTTTGGGGGCCCTGAAGCAGAGCCTGAGGCAATTGGAAACTCTTGGTGCTCAACGAGCAGGTCTTGAAGACATGCTTAAAGAGATGAAAAGAAAGGATGATATACTTCCTAAGTTGATGACCTCAACTGGCTCCTATGAGGATCTGTTCAGGAAGGAGATATCAAAATATGATCATATATGCGAAGACATTGCCCAAAATATTGAGGCTCAAGAACAATTATTGCTGCAAATCCAGGCCCAAAATGATGAGTTTGCTGCCATCTTCAACCTTGAAGATTACAAAGCATCTCGTGAGAAATGTTACAAGCAGATTCAAGCTGCCATAGCAAAGTTCCGTGAAATTAAGGACAACATAAACGAGGGGTTAAAGTTTTATGTTACTCTCCAGGATGCAATAACGAATGTAAAGCAGCAGTGCAGTGATTTTGTGATGACTAGAAACATCCAGTGCCAGGAAATGATTGAAGATGTGCACAAACAAATGGCAGGCCTCAATTTCCAAGATGCTAAAAGCACAGGCACATACAACAACAGCTATCCTTCTGTCGGACATCAAGCTCAGAGACCTGTTTCACAACAGCAAACAGATCCTCGTCCTCAAACACCATACTACCATCCTCCTGAGCAGCCAGCAATGGCTGGGTATGCTCACCCTCCCCCCTATAGCTCGACGCAGCAGATGCCATCTCCTTATGTTCTGCCACCTCAAACTGGTAGTCCATATGCACCTTCTCAAGCTGGTAGTCCGTACCCACCTCCTCAAGCCGGTAGTCCATACCCACCTCCACAGGCCCAGCAACAGCCACCTGCAAACCATGACTATGGTCAACCTGCTTATCCAGGGTGGCGAGGTCCATACTACAATTCCCATGCACAACAAGCCGGATCTCATCCTCGACCTCCTTACACCATTCCAGGTCAATACCGCCCTCCTCAACAGGGTGGCTACTATAAGCAACAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005829 GO:0005911 GO:0006996 GO:0007032 GO:0007033 GO:0007275 GO:0008150 GO:0009506 GO:0009653 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016050 GO:0022603 GO:0030054 GO:0031156 GO:0031285 GO:0031286 GO:0031410 GO:0031982 GO:0032101 GO:0032102 GO:0032104 GO:0032105 GO:0032107 GO:0032108 GO:0032182 GO:0032501 GO:0032502 GO:0036257 GO:0042173 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0043621 GO:0043900 GO:0043901 GO:0043937 GO:0043938 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045881 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051241 GO:0055044 GO:0065007 GO:0071840 GO:0075260 GO:0075262 GO:0097708 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

ALIX_LYPXL_bnd BRO1

Protein Analysis

887

Amino Acids

99.33

Weight (kDa)

6.14

Isoelectric Point (pI)

59.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15130
fragaria_vesca	FvH4_4g26260 FvH4_4g26260
malus_domestica	MD13G1031100.v1.1 MD16G1033300.v1.1
prunus_persica	Prupe.1G321000_v2.0.a1 Prupe.1G321000_v2.0.a1
pyrus_communis	pycom13g02720 pycom16g02790
rosa_chinensis	RchiOBHm_Chr4g0433861
rosa_laevigata	RLG00000006722
rosa_multiflora	Rmu_co8294453.1_g000001 Rmu_sc0000352.1_g000001 Rmu_ssc0000164.1_g000001
rosa_roxburghii	Rroxscaffold_5G00375260
rosa_rugosa	Rorug04G0271800 Rorug04G0271900
rosa_samantha	Rh4AG326600 Rh4BG334000 Rh4CG349700 Rh4DG330800
rosa_wichuraiana	Rw4G028310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2512
Acc36I	ACCTGC	4 cut(s)	670, 1745, 2512, 2536
AccB1I	GGYRCC	1 cut(s)	26
AccBSI	CCGCTC	1 cut(s)	177
AccII	CGCG	6 cut(s)	129, 222, 438, 473, 500, 665
AclWI	GGATC	7 cut(s)	300, 764, 881, 1305, 1845, 2279, 2590
AcoI	YGGCCR	1 cut(s)	486
AcsI	RAATTY	1 cut(s)	1279
AcuI	CTGAAG	1 cut(s)	1730
AcyI	GRCGYC	2 cut(s)	5, 327
AfaI	GTAC	1 cut(s)	2447
AfeI	AGCGCT	1 cut(s)	1583
AflIII	ACRYGT	1 cut(s)	471
AjnI	CCWGG	7 cut(s)	752, 1392, 1929, 2082, 2148, 2536, 2611
AjuI	GAANNNNNNNTTGG	2 cut(s)	353, 385
Alw21I	GWGCWC	5 cut(s)	545, 650, 1422, 1747, 2172
Alw26I	GTCTC	3 cut(s)	257, 504, 2254
Alw44I	GTGCAC	1 cut(s)	2168
AlwI	GGATC	7 cut(s)	300, 764, 881, 1305, 1845, 2279, 2590
AlwNI	CAGNNNCTG	3 cut(s)	753, 928, 1720
Ama87I	CYCGRG	2 cut(s)	185, 673
Aor51HI	AGCGCT	1 cut(s)	1583
ApaI	GGGCCC	2 cut(s)	1340, 1708
ApaLI	GTGCAC	1 cut(s)	2168
ApoI	RAATTY	1 cut(s)	1279
ArsI	GACNNNNNNTTYG	4 cut(s)	541, 573, 2398, 2430
AspLEI	GCGC	6 cut(s)	192, 404, 440, 610, 665, 1584
AspS9I	GGNCC	9 cut(s)	750, 1246, 1336, 1337, 1704, 1705, 1933, 2488, 2549
AsuC2I	CCSGG	2 cut(s)	490, 654
AsuHPI	GGTGA	5 cut(s)	175, 273, 1072, 1399, 2339
AvaI	CYCGRG	2 cut(s)	185, 673
AvaII	GGWCC	2 cut(s)	1246, 2549
AxyI	CCTNAGG	1 cut(s)	1721
BaeGI	GKGCMC	3 cut(s)	1340, 1708, 2172
BanI	GGYRCC	1 cut(s)	26
BanII	GRGCYC	5 cut(s)	545, 1340, 1422, 1474, 1708
BarI	GAAGNNNNNNTAC	2 cut(s)	1344, 1376
BauI	CACGAG	1 cut(s)	1986
BbsI	GAAGAC	4 cut(s)	71, 153, 1770, 1887
Bbv12I	GWGCWC	5 cut(s)	545, 650, 1422, 1747, 2172
BccI	CCATC	8 cut(s)	59, 211, 284, 314, 1470, 1964, 2319, 2389
BceAI	ACGGC	1 cut(s)	368
BcgI	CGANNNNNNTGC	4 cut(s)	88, 122, 1868, 1902
BciT130I	CCWGG	7 cut(s)	754, 1394, 1931, 2084, 2150, 2538, 2613
BclI	TGATCA	1 cut(s)	1867
BcnI	CCSGG	2 cut(s)	490, 654
BcoDI	GTCTC	3 cut(s)	257, 504, 2254
BfaI	CTAG	3 cut(s)	818, 1026, 2133
BfmI	CTRYAG	2 cut(s)	805, 2359
BfoI	RGCGCY	3 cut(s)	193, 405, 1585
BfuAI	ACCTGC	4 cut(s)	670, 1745, 2512, 2536
BglII	AGATCT	1 cut(s)	669
Bme1390I	CCNGG	9 cut(s)	490, 654, 754, 1394, 1931, 2084, 2150, 2538, 2613
Bme18I	GGWCC	2 cut(s)	1246, 2549
BmeT110I	CYCGRG	2 cut(s)	185, 673
BmgT120I	GGNCC	9 cut(s)	750, 1246, 1336, 1337, 1704, 1705, 1933, 2488, 2549
BmiI	GGNNCC	8 cut(s)	28, 1017, 1337, 1338, 1471, 1705, 1706, 1828
BmrFI	CCNGG	9 cut(s)	490, 654, 754, 1394, 1931, 2084, 2150, 2538, 2613
BoxI	GACNNNNGTC	2 cut(s)	551, 2520
BpiI	GAAGAC	4 cut(s)	71, 153, 1770, 1887
BplI	GAGNNNNNCTC	4 cut(s)	990, 1022, 1218, 1250
BpmI	CTGGAG	2 cut(s)	992, 2066
Bpu10I	CCTNAGC	2 cut(s)	1370, 2319
BpuEI	CTTGAG	4 cut(s)	1220, 1890, 2415, 2442
BpuMI	CCSGG	2 cut(s)	490, 654
Bsa29I	ATCGAT	2 cut(s)	78, 533
BsaBI	GATNNNNATC	1 cut(s)	291
BsaHI	GRCGYC	2 cut(s)	5, 327
BsaI	GGTCTC	2 cut(s)	257, 2254
BsaJI	CCNNGG	5 cut(s)	483, 489, 525, 1056, 2537
BsaXI	ACNNNNNCTCC	2 cut(s)	1094, 1124
Bse118I	RCCGGY	1 cut(s)	2462
Bse1I	ACTGG	4 cut(s)	1116, 1828, 2143, 2413
Bse21I	CCTNAGG	1 cut(s)	1721
Bse3DI	GCAATG	3 cut(s)	724, 1884, 2337
Bse8I	GATNNNNATC	1 cut(s)	291
BseBI	CCWGG	7 cut(s)	754, 1394, 1931, 2084, 2150, 2538, 2613
BseCI	ATCGAT	2 cut(s)	78, 533
BseDI	CCNNGG	5 cut(s)	483, 489, 525, 1056, 2537
BseGI	GGATG	9 cut(s)	363, 585, 937, 1684, 1798, 2092, 2139, 2311, 2587
BseJI	GATNNNNATC	1 cut(s)	291
BseMI	GCAATG	3 cut(s)	724, 1884, 2337
BseMII	CTCAG	8 cut(s)	879, 1347, 1463, 1502, 1599, 1712, 2270, 2310
BseNI	ACTGG	4 cut(s)	1116, 1828, 2143, 2413
BseRI	GAGGAG	4 cut(s)	218, 1430, 2445, 2619
BseSI	GKGCMC	3 cut(s)	1340, 1708, 2172
BseX3I	CGGCCG	1 cut(s)	486
BseYI	CCCAGC	4 cut(s)	354, 575, 2336, 2490
BsgI	GTGCAG	3 cut(s)	903, 1343, 2134
Bsh1236I	CGCG	6 cut(s)	129, 222, 438, 473, 500, 665
Bsh1285I	CGRYCG	4 cut(s)	436, 454, 489, 555
BshNI	GGYRCC	1 cut(s)	26
BshVI	ATCGAT	2 cut(s)	78, 533
BsiEI	CGRYCG	4 cut(s)	436, 454, 489, 555
BsiHKAI	GWGCWC	5 cut(s)	545, 650, 1422, 1747, 2172
BsiHKCI	CYCGRG	2 cut(s)	185, 673
BsiSI	CCGG	4 cut(s)	489, 653, 2463, 2580
BsmAI	GTCTC	3 cut(s)	257, 504, 2254
BsmI	GAATGC	1 cut(s)	1597
Bso31I	GGTCTC	2 cut(s)	257, 2254
BsoBI	CYCGRG	2 cut(s)	185, 673
Bsp120I	GGGCCC	2 cut(s)	1336, 1704
Bsp1286I	GDGCHC	8 cut(s)	545, 650, 1340, 1422, 1474, 1708, 1747, 2172
Bsp19I	CCATGG	1 cut(s)	1056
BspCNI	CTCAG	8 cut(s)	880, 1348, 1462, 1501, 1598, 1713, 2269, 2311
BspDI	ATCGAT	2 cut(s)	78, 533
BspFNI	CGCG	6 cut(s)	129, 222, 438, 473, 500, 665
BspHI	TCATGA	1 cut(s)	1008
BspLI	GGNNCC	8 cut(s)	28, 1017, 1337, 1338, 1471, 1705, 1706, 1828
BspMI	ACCTGC	4 cut(s)	670, 1745, 2512, 2536
BspPI	GGATC	7 cut(s)	300, 764, 881, 1305, 1845, 2279, 2590
BspT107I	GGYRCC	1 cut(s)	26
BspTNI	GGTCTC	2 cut(s)	257, 2254
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	3 cut(s)	724, 1884, 2337
BsrFI	RCCGGY	1 cut(s)	2462
BsrI	ACTGG	4 cut(s)	1116, 1828, 2143, 2413
BssAI	RCCGGY	1 cut(s)	2462
BssECI	CCNNGG	5 cut(s)	483, 489, 525, 1056, 2537
BssNI	GRCGYC	2 cut(s)	5, 327
BssSI	CACGAG	1 cut(s)	1986
BssT1I	CCWWGG	2 cut(s)	525, 1056
Bst2BI	CACGAG	1 cut(s)	1986
Bst2UI	CCWGG	7 cut(s)	754, 1394, 1931, 2084, 2150, 2538, 2613
Bst4CI	ACNGT	6 cut(s)	163, 445, 452, 553, 861, 965
Bst6I	CTCTTC	2 cut(s)	831, 1293
BstACI	GRCGYC	2 cut(s)	5, 327
BstAPI	GCANNNNNTGC	1 cut(s)	2377
BstDSI	CCRYGG	1 cut(s)	1056
BstF5I	GGATG	9 cut(s)	363, 585, 937, 1684, 1798, 2092, 2139, 2311, 2587
BstFNI	CGCG	6 cut(s)	129, 222, 438, 473, 500, 665
BstH2I	RGCGCY	3 cut(s)	193, 405, 1585
BstHHI	GCGC	6 cut(s)	192, 404, 440, 610, 665, 1584
BstMAI	GTCTC	3 cut(s)	257, 504, 2254
BstMCI	CGRYCG	4 cut(s)	436, 454, 489, 555
BstNI	CCWGG	7 cut(s)	754, 1394, 1931, 2084, 2150, 2538, 2613
BstNSI	RCATGY	3 cut(s)	717, 769, 1771
BstPAI	GACNNNNGTC	2 cut(s)	551, 2520
BstSCI	CCNGG	9 cut(s)	488, 652, 752, 1392, 1929, 2082, 2148, 2536, 2611
BstSFI	CTRYAG	2 cut(s)	805, 2359
BstSLI	GKGCMC	3 cut(s)	1340, 1708, 2172
BstUI	CGCG	6 cut(s)	129, 222, 438, 473, 500, 665
BstV2I	GAAGAC	4 cut(s)	71, 153, 1770, 1887
BstX2I	RGATCY	6 cut(s)	669, 756, 1297, 1837, 2284, 2582
BstXI	CCANNNNNNTGG	1 cut(s)	2519
BstYI	RGATCY	6 cut(s)	669, 756, 1297, 1837, 2284, 2582
BstZI	CGGCCG	1 cut(s)	486
Bsu15I	ATCGAT	2 cut(s)	78, 533
Bsu36I	CCTNAGG	1 cut(s)	1721
BsuTUI	ATCGAT	2 cut(s)	78, 533
BtgI	CCRYGG	1 cut(s)	1056
BtgZI	GCGATG	2 cut(s)	91, 1088
BtsCI	GGATG	9 cut(s)	363, 585, 937, 1684, 1798, 2092, 2139, 2311, 2587
BtsI	GCAGTG	3 cut(s)	1326, 2117, 2122
BtsIMutI	CAGTG	6 cut(s)	883, 1158, 1326, 2117, 2122, 2150
BveI	ACCTGC	4 cut(s)	670, 1745, 2512, 2536
CaiI	CAGNNNCTG	3 cut(s)	753, 928, 1720
CciI	TCATGA	1 cut(s)	1008
CfoI	GCGC	6 cut(s)	192, 404, 440, 610, 665, 1584
Cfr10I	RCCGGY	1 cut(s)	2462
Cfr13I	GGNCC	9 cut(s)	750, 1246, 1336, 1337, 1704, 1705, 1933, 2488, 2549
ClaI	ATCGAT	2 cut(s)	78, 533
CseI	GACGC	3 cut(s)	335, 607, 2377
Csp6I	GTAC	1 cut(s)	2446
CviQI	GTAC	1 cut(s)	2446
DraI	TTTAAA	2 cut(s)	732, 1456
EaeI	YGGCCR	1 cut(s)	486
EagI	CGGCCG	1 cut(s)	486
Eam1104I	CTCTTC	2 cut(s)	831, 1293
EarI	CTCTTC	2 cut(s)	831, 1293
EciI	GGCGGA	1 cut(s)	714
Ecl136II	GAGCTC	2 cut(s)	543, 1420
EclXI	CGGCCG	1 cut(s)	486
Eco130I	CCWWGG	2 cut(s)	525, 1056
Eco147I	AGGCCT	2 cut(s)	1486, 2187
Eco24I	GRGCYC	5 cut(s)	545, 1340, 1422, 1474, 1708
Eco31I	GGTCTC	2 cut(s)	257, 2254
Eco32I	GATATC	1 cut(s)	1857
Eco47I	GGWCC	2 cut(s)	1246, 2549
Eco47III	AGCGCT	1 cut(s)	1583
Eco52I	CGGCCG	1 cut(s)	486
Eco53kI	GAGCTC	2 cut(s)	543, 1420
Eco57I	CTGAAG	1 cut(s)	1730
Eco81I	CCTNAGG	1 cut(s)	1721
Eco88I	CYCGRG	2 cut(s)	185, 673
EcoICRI	GAGCTC	2 cut(s)	543, 1420
EcoO109I	RGGNCCY	5 cut(s)	750, 1336, 1337, 1704, 1705
EcoRII	CCWGG	7 cut(s)	752, 1392, 1929, 2082, 2148, 2536, 2611
EcoRV	GATATC	1 cut(s)	1857
EcoT14I	CCWWGG	2 cut(s)	525, 1056
EcoT38I	GRGCYC	5 cut(s)	545, 1340, 1422, 1474, 1708
ErhI	CCWWGG	2 cut(s)	525, 1056
FalI	AAGNNNNNCTT	2 cut(s)	1755, 1787
FauI	CCCGC	2 cut(s)	224, 275
FauNDI	CATATG	1 cut(s)	2419
FbaI	TGATCA	1 cut(s)	1867
FokI	GGATG	9 cut(s)	350, 592, 944, 1691, 1805, 2099, 2126, 2298, 2574
FriOI	GRGCYC	5 cut(s)	545, 1340, 1422, 1474, 1708
FspBI	CTAG	3 cut(s)	818, 1026, 2133
GlaI	GCGC	6 cut(s)	191, 403, 439, 609, 664, 1583
GsaI	CCCAGC	4 cut(s)	358, 579, 2340, 2494
GsuI	CTGGAG	2 cut(s)	992, 2066
HaeII	RGCGCY	3 cut(s)	193, 405, 1585
HapII	CCGG	4 cut(s)	489, 653, 2463, 2580
HgaI	GACGC	3 cut(s)	335, 607, 2377
HhaI	GCGC	6 cut(s)	192, 404, 440, 610, 665, 1584
Hin1I	GRCGYC	2 cut(s)	5, 327
Hin6I	GCGC	6 cut(s)	190, 402, 438, 608, 663, 1582
HinP1I	GCGC	6 cut(s)	190, 402, 438, 608, 663, 1582
HincII	GTYRAC	2 cut(s)	448, 2525
HindII	GTYRAC	2 cut(s)	448, 2525
HindIII	AAGCTT	2 cut(s)	702, 798
HinfI	GANTC	5 cut(s)	925, 1256, 1399, 1637, 2008
HpaII	CCGG	4 cut(s)	489, 653, 2463, 2580
HphI	GGTGA	5 cut(s)	175, 273, 1072, 1399, 2339
Hpy166II	GTNNAC	6 cut(s)	448, 1003, 1217, 1390, 2170, 2525
Hpy8I	GTNNAC	6 cut(s)	448, 1003, 1217, 1390, 2170, 2525
Hpy99I	CGWCG	5 cut(s)	263, 550, 553, 1629, 2371
HpyCH4III	ACNGT	6 cut(s)	163, 445, 452, 553, 861, 965
HpyCH4IV	ACGT	1 cut(s)	39
HpySE526I	ACGT	1 cut(s)	39
Hsp92I	GRCGYC	2 cut(s)	5, 327
HspAI	GCGC	6 cut(s)	190, 402, 438, 608, 663, 1582
Ksp22I	TGATCA	1 cut(s)	1867
LmnI	GCTCC	7 cut(s)	177, 182, 540, 645, 1417, 1469, 1832
MaeI	CTAG	3 cut(s)	818, 1026, 2133
MaeII	ACGT	1 cut(s)	39
MaeIII	GTNAC	3 cut(s)	1359, 1997, 2074
MbiI	CCGCTC	1 cut(s)	177
MfeI	CAATTG	1 cut(s)	1727
MflI	RGATCY	6 cut(s)	669, 756, 1297, 1837, 2284, 2582
MhlI	GDGCHC	8 cut(s)	545, 650, 1340, 1422, 1474, 1708, 1747, 2172
MluI	ACGCGT	1 cut(s)	471
MlyI	GAGTC	1 cut(s)	1265
MmeI	TCCRAC	3 cut(s)	204, 564, 2224
MseI	TTAA	9 cut(s)	731, 773, 863, 960, 1302, 1455, 1773, 2040, 2063
MslI	CAYNNNNRTG	2 cut(s)	1163, 2517
MspI	CCGG	4 cut(s)	489, 653, 2463, 2580
MspR9I	CCNGG	9 cut(s)	490, 654, 754, 1394, 1931, 2084, 2150, 2538, 2613
MunI	CAATTG	1 cut(s)	1727
Mva1269I	GAATGC	1 cut(s)	1597
MvaI	CCWGG	7 cut(s)	754, 1394, 1931, 2084, 2150, 2538, 2613
MvnI	CGCG	6 cut(s)	129, 222, 438, 473, 500, 665
NciI	CCSGG	2 cut(s)	490, 654
NcoI	CCATGG	1 cut(s)	1056
NdeI	CATATG	1 cut(s)	2419
NlaIV	GGNNCC	8 cut(s)	28, 1017, 1337, 1338, 1471, 1705, 1706, 1828
NmeAIII	GCCGAG	1 cut(s)	464
NspI	RCATGY	3 cut(s)	717, 769, 1771
PaeI	GCATGC	1 cut(s)	717
PaeR7I	CTCGAG	2 cut(s)	185, 673
PagI	TCATGA	1 cut(s)	1008
PaqCI	CACCTGC	1 cut(s)	2512
PceI	AGGCCT	2 cut(s)	1486, 2187
PcsI	WCGNNNNNNNCGW	2 cut(s)	54, 491
PctI	GAATGC	1 cut(s)	1597
PfeI	GAWTC	4 cut(s)	925, 1399, 1637, 2008
PfoI	TCCNGGA	1 cut(s)	2082
Ple19I	CGATCG	1 cut(s)	436
PleI	GAGTC	1 cut(s)	1264
PpsI	GAGTC	1 cut(s)	1264
PshAI	GACNNNNGTC	2 cut(s)	551, 2520
Psp124BI	GAGCTC	2 cut(s)	545, 1422
Psp6I	CCWGG	7 cut(s)	752, 1392, 1929, 2082, 2148, 2536, 2611
PspFI	CCCAGC	4 cut(s)	354, 575, 2336, 2490
PspGI	CCWGG	7 cut(s)	752, 1392, 1929, 2082, 2148, 2536, 2611
PspN4I	GGNNCC	8 cut(s)	28, 1017, 1337, 1338, 1471, 1705, 1706, 1828
PspOMI	GGGCCC	2 cut(s)	1336, 1704
PspPI	GGNCC	9 cut(s)	750, 1246, 1336, 1337, 1704, 1705, 1933, 2488, 2549
PspXI	VCTCGAGB	1 cut(s)	185
PstNI	CAGNNNCTG	3 cut(s)	753, 928, 1720
PsuI	RGATCY	6 cut(s)	669, 756, 1297, 1837, 2284, 2582
PvuI	CGATCG	1 cut(s)	436
RsaI	GTAC	1 cut(s)	2447
RsaNI	GTAC	1 cut(s)	2446
RseI	CAYNNNNRTG	2 cut(s)	1163, 2517
SacI	GAGCTC	2 cut(s)	545, 1422
SaqAI	TTAA	9 cut(s)	731, 773, 863, 960, 1302, 1455, 1773, 2040, 2063
Sau96I	GGNCC	9 cut(s)	750, 1246, 1336, 1337, 1704, 1705, 1933, 2488, 2549
SchI	GAGTC	1 cut(s)	1265
ScrFI	CCNGG	9 cut(s)	490, 654, 754, 1394, 1931, 2084, 2150, 2538, 2613
SduI	GDGCHC	8 cut(s)	545, 650, 1340, 1422, 1474, 1708, 1747, 2172
SfcI	CTRYAG	2 cut(s)	805, 2359
Sfr274I	CTCGAG	2 cut(s)	185, 673
SinI	GGWCC	2 cut(s)	1246, 2549
SlaI	CTCGAG	2 cut(s)	185, 673
SmiMI	CAYNNNNRTG	2 cut(s)	1163, 2517
SmlI	CTYRAG	6 cut(s)	185, 673, 1235, 1905, 2430, 2457
SmoI	CTYRAG	6 cut(s)	185, 673, 1235, 1905, 2430, 2457
SphI	GCATGC	1 cut(s)	717
SseBI	AGGCCT	2 cut(s)	1486, 2187
SspI	AATATT	1 cut(s)	1897
SspMI	CTAG	3 cut(s)	818, 1026, 2133
SstI	GAGCTC	2 cut(s)	545, 1422
StuI	AGGCCT	2 cut(s)	1486, 2187
StyD4I	CCNGG	9 cut(s)	488, 652, 752, 1392, 1929, 2082, 2148, 2536, 2611
StyI	CCWWGG	2 cut(s)	525, 1056
TaaI	ACNGT	6 cut(s)	163, 445, 452, 553, 861, 965
TaiI	ACGT	1 cut(s)	42
TauI	GCSGC	4 cut(s)	222, 460, 521, 713
TfiI	GAWTC	4 cut(s)	925, 1399, 1637, 2008
Tru1I	TTAA	9 cut(s)	731, 773, 863, 960, 1302, 1455, 1773, 2040, 2063
Tru9I	TTAA	9 cut(s)	731, 773, 863, 960, 1302, 1455, 1773, 2040, 2063
TscAI	CASTG	6 cut(s)	883, 1165, 1326, 2117, 2122, 2150
TspDTI	ATGAA	3 cut(s)	1091, 1701, 1796
TspGWI	ACGGA	3 cut(s)	1310, 2021, 2433
TspRI	CASTG	6 cut(s)	883, 1165, 1326, 2117, 2122, 2150
VneI	GTGCAC	1 cut(s)	2168
VpaK11BI	GGWCC	2 cut(s)	1246, 2549
XapI	RAATTY	1 cut(s)	1279
XbaI	TCTAGA	1 cut(s)	817
XceI	RCATGY	3 cut(s)	717, 769, 1771
XhoI	CTCGAG	2 cut(s)	185, 673
XspI	CTAG	3 cut(s)	818, 1026, 2133

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.