AT1G16710

histone acetyltransferase of the CBP family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
5713794 .. 5722614
8821 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G16710.7

Sequence Viewer

Length: 5121 bp
ATGAATGTTCAGGCTCACATGTCTGGTCAACGGTCTGGGCAGGTTCCAAACCAAGGGACAGTGCCGCAGAATAATGGAAACTCTCAAATGCAGAATTTAGTTGGTAGTAATGGTGCTGCTACTGCTGTTACTGGTGCTGGTGCTGCTACTGGTTCTGGTACTGGTGTAAGGCCTTCACGTAACATCGTTGGTGCCATGGATCATGATATTATGAAACTTCGACAGTACATGCAAACTCTTGTGTTTAACATGTTACAGCAACGGCAACCATCTCCAGCTGATGCTGCATCAAAGGCAAAGTATATGGATGTTGCTAGACGTTTAGAAGAAGGGCTGTTTAAGATGGCTGTCACAAAGGAGGATTACATGAACCGGTCAACCCTTGAATCTCGTATTACAAGCCTAATAAAAGGAAGACAGATAAATAACTACAATCAGCGACATGCTAATTCTTCTTCAGTTGGAACGATGATACCTACTCCAGGATTATCACAGACTGCGGGTAATCCTAATTTGATGGTTACATCCTCTGTTGATGCTACTATAGTTGGCAACACCAACATCACAAGCACTGCTTTGAACACTGGAAACCCTCTAATTGCTGGTGGCATGCATGGAGGTAATATGTCTAATGGATATCAGCACTCGTCGAGAAACTTTTCTCTTGGTTCTGGAGGGAGCATGACATCCATGGGTGCTCAAAGAAGTACAGCCCAAATGATTCCTACACCTGGCTTCGTTAACAGTGTTACTAACAACAACAGTGGTGGATTTTCTGCTGAGCCCACAATTGTTCCTCAGTCTCAGCAACAACAACAAAGGCAACATACTGGTGGTCAAAACAGTCACATGTTGTCCAACCATATGGCTGCTGGCGTTAGACCCGACATGCAATCAAAGCCGTCGGGTGCGGCCAACAGCTCTGTAAATGGTGATGTTGGAGCGAACGAAAAAATTGTAGACTCAGGTTCATCTTACACCAATGCGTCCAAAAAATTACAGCAGGGTAACTTCTCTCTTCTTTCCTTCTGTCCGGATGATCTCATTTCAGGTCAGCATATTGAAAGCACGTTTCATATTTCAGGGGAAGGTTATAGCACAACAAATCCTGACCCCTTCGATGGAGCTATAACATCGGCTGGGACAGGGACAAAGGCTCATAATATCAATACAGCAAGTTTCCAGCCTGTGTCCAGAGTTAACTCTTCTCTGTCACATCAACAACAATTTCAGCAACCGCCTAATCGATTTCAGCAACAACCAAATCAGATTCAACAGCAGCAGCAGCAATTTCTCAATCAGAGGAAATTGAAGCAGCAGACTCCGCAGCAACATAGATTAATAAGCAATGATGGCTTGGGGAAAACTCAAGTGGATTCAGACATGGTTACGAAGGTGAAATGTGAACCTGGAATGGAGAACAAGAGTCAGGCTCCACAGTCCCAAGCATCTGAACGATTCCAGCTTTCTCAGCTCCAGAATCAATATCAGAACTCTGGAGAAGACTGCCAAGCAGACGCTCAGCTTCTCCCAGTCGAAAGTCAGAGTGATATATGTACATCACTCCCCCAAAATAGCCAGCAGATTCAGCAAATGATGCACCCGCAGAATATAGGTTCTGATTCTAGTAACAGTTTTAGCAATCTTGCTGTTGGAGTAAAATCAGAATCCAGTCCACAGGGTCAATGGCCTTCCAAGTCTCAGGAAAATACTCTAATGTCTAATGCTATTTCAAGTGGAAAGCACATTCAGGAGGATTTCCGTCAAAGAATTACCGGAATGGATGAAGCTCAACCTAATAATTTGACTGAAGGGTCTGTTATTGGTCAAAATCATACTTCTACTATATCGGAATCCCATAATCTGCAAAATTCTATTGGTACCACATGTAGATATGGAAACGTAAGTCACGATCCCAAGTTCAAAAATCAACAAAGATGGCTACTGTTTCTACGTCATGCACGGAGTTGCAAACCGCCAGGAGGGAGATGCCAAGATCAAAATTGCGTAACAGTTCAGAAACTATGGAGTCACATGGACAATTGTGCTGATCCTCAGTGTTTGTATCCCCGCTGTCGTCACACAAAGGCATTGATTGGCCACTATAAAAACTGCAAGGATCCTCGGTGCCCCGTCTGTGTGCCAGTGAAGACTTATCAGCAACAAGCTAATGTTCGTGCCCTGGCCCGTTTAAAAAACGAAAGCAGTGCTGTGGGCTCAGTGAATAGATCTGTAGTATCAAATGATTCACTAAGCGCTAATGCTGGAGCGGTTTCTGGTACCCCTCGTTGTGCTGATACTTTAGATAATTTGCAACCTTCATTAAAGCGGTTGAAGGTGGAGCAATCTTTTCAACCAGTGGTCCCTAAGACTGAAAGTTGTAAAAGCTCCATTGTTTCTACAACAGAGGCAGACTTATCTCAGGATGCTGAAAGAAAGGATCATAGGCCATTGAAGTCAGAGACCATGGAAGTGAAAGTGGAAATTCCTGATAATTCTGTTCAAGCAGGATTCGGCATCAAAGAAACGAAAAGTGAACCTTTTGAAAATGTTCCCAAGCCTAAGCCTGTCAGTGAACCAGGTAAACATGGTTTATCTGGTGACTCGCCAAAGCAAGAAAACATCAAAATGAAGAAAGAGCCTGGATGGCCGAAGAAAGAGCCTGGATGTCCAAAGAAAGAAGAACTGGTGGAGTCTCCTGAACTTACCTCAAAATCTAGAAAACCAAAGATAAAGGGTGTTTCTTTAACTGAATTGTTTACTCCGGAACAAGTGAGAGAACATATCCGTGGTCTTCGTCAGTGGGTTGGCCAGAGTAAAGCCAAAGCAGAAAAGAATCAGGCAATGGAGAATTCAATGAGTGAGAATTCCTGCCAGTTATGTGCGGTGGAGAAGCTTACATTTGAGCCACCACCTATTTATTGTACTCCTTGTGGTGCTCGTATCAAAAGGAATGCGATGTACTATACTGTTGGAGGTGGTGAAACTCGTCATTACTTTTGTATTCCCTGTTATAATGAATCCCGAGGAGACACTATTCTCGCTGAAGGGACTTCCATGCCAAAGGCAAAACTCGAGAAAAAGAAAAACGATGAAGAGATTGAAGAATCGTGGGTCCAATGTGATAAATGTCAGGCCTGGCAGCATCAAATATGTGCTCTATTTAATGGGCGGAGGAATGATGGGGGGCAAGCTGAGTATACCTGCCCATATTGCTATGTAATTGATGTGGAGCAAAATGAGAGAAAGCCTTTACTTCAGAGTGCTGTTCTTGGAGCGAAAGATCTGCCAAGAACAATTCTCAGTGACCATATAGAGCAGCGGTTGTTTAAAAGGCTGAAGCAGGAAAGGACTGAGAGAGCCAGGGTTCAAGGAACAAGTTATGATGAGATTCCAACTGTTGAATCCCTTGTGGTTAGAGTTGTTTCATCTGTTGACAAGAAGCTAGAAGTTAAATCTCGATTTCTTGAAATTTTTCGGGAGGATAATTTTCCGACAGAATTTCCATACAAGTCCAAGGTGGTTCTGCTGTTCCAGAAGATAGAAGGTGTAGAAGTATGCTTGTTTGGGATGTATGTCCAAGAATTTGGATCCGAATGTTCAAATCCCAATCAACGCCGTGTTTATCTCTCGTATTTGGATTCTGTGAAGTACTTTAGACCTGATATCAAGTCTGCTAATGGGGAGGCTCTGCGCACTTTCGTTTACCACGAAATTCTTATTGGTTATCTGGAATACTGCAAATTGCGTGGTTTCACGAGCTGCTACATATGGGCTTGTCCACCACTGAAGGGTGAGGATTATATCCTATATTGCCATCCAGAAATTCAGAAAACACCAAAGTCTGATAAACTACGGGAATGGTACTTAGCAATGTTGAGAAAAGCTGCAAAGGAAGGAATTGTTGCGGAAACTACAAATCTATATGACCATTTTTTCTTGCAAACTGGTGAATGTAGAGCTAAGGTTACAGCAGCTAGACTCCCGTACTTCGATGGTGACTACTGGCCAGGTGCAGCAGAGGATATCATATCCCAAATGAGTCAAGAAGATGATGGTAGAAAGGGAAATAAAAAAGGAATACTCAAGAAACCCATTACAAAGAGGGCTCTTAAAGCATCTGGCCAGTCGGATTTCTCTGGGAATGCTTCCAAAGACCTGCTACTAATGCATAAACTTGGTGAGACCATTCATCCAATGAAGGAGGATTTTATCATGGTTCACTTGCAGCATAGTTGCACACATTGCTGTACGCTGATGGTAACTGGAAATCGTTGGGTTTGCAGCCAATGCAAAGATTTCCAGTTATGTGATGGATGTTATGAGGCTGAGCAGAAACGAGAAGACAGAGAAAGACATCCTGTTAATCAGAAAGATAAACATAATATTTTTCCTGTTGAGATCGCCGATATTCCTACGGATACTAAGGACAGAGATGAGATACTTGAAAGTGAATTCTTTGATACAAGGCAAGCATTCCTGAGTCTATGTCAAGGGAACCATTATCAGTATGATACACTGAGGCGGGCAAAACATTCTTCCATGATGGTGCTTTATCATCTGCATAATCCTACTGCTCCTGCCTTTGTGACAACATGTAACGTATGTCACCTCGATATTGAAAGTGGTCTAGGCTGGCGCTGTGAAGTTTGCCCAGACTATGATGTGTGCAATGCTTGTTACAAGAAAGAGGGTTGTATTAATCATCCTCATAAGTTAACAACTCATCCATCTCTAGCTGATCAAAACGCTCAGAATAAAGAAGCTAGGCAATTGCGAGTCTTGCAGCTCAGGAAAATGCTCGATCTTCTGGTGCATGCGTCGCAATGCCGTTCTCCAGTTTGTCTATATCCCAACTGCCGCAAAGTGAAGGGGCTATTCCGACATGGTCTCCGCTGCAAAGTACGTGCTTCAGGAGGTTGTGTTCTATGCAAGAAAATGTGGTATCTGTTGCAACTCCACGCTCGGGCCTGCAAGGAATCCGAGTGTGATGTACCTCGATGCGGGGACCTAAAGGAACATCTGAGAAGGTTACAACAGCAATCAGATTCTAGGCGGAGAGCTGCCGTCATGGAGATGATGAGACAGAGAGCTGCAGAAGTCGCTGGAACCTCGGGTTGA

Protein Analysis

1706

Amino Acids

190.27

Weight (kDa)

8.74

Isoelectric Point (pI)

52.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-TAZ PF02135 618 - 687 5.3e-19 TAZ zinc finger
HAT_KAT11 PF08214 1104 - 1320 3.4e-37 Histone acetylation protein
zf-TAZ PF02135 1572 - 1642 6.6e-14 TAZ zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3015
AasI GACNNNNNNGTC 1 cut(s) 1813
Acc16I TGCGCA 1 cut(s) 3695
Acc36I ACCTGC 3 cut(s) 31, 3212, 4167
Acc65I GGTACC 2 cut(s) 1880, 2279
AccB1I GGYRCC 4 cut(s) 191, 1880, 2127, 2279
AccBSI CCGCTC 1 cut(s) 2270
AccI GTMKAC 2 cut(s) 960, 3200
AccIII TCCGGA 2 cut(s) 1033, 2764
AclWI GGATC 8 cut(s) 207, 1907, 2045, 2114, 2127, 2448, 3585, 3598
AcoI YGGCCR 6 cut(s) 912, 2098, 2648, 2809, 4007, 4123
AcuI CTGAAG 7 cut(s) 441, 1830, 3066, 3242, 3359, 3809, 4896
AfeI AGCGCT 1 cut(s) 2257
AfiI CCNNNNNNNGG 8 cut(s) 53, 482, 731, 1121, 1982, 3791, 4966, 5003
AflIII ACRYGT 5 cut(s) 18, 249, 849, 1886, 4595
AgeI ACCGGT 1 cut(s) 372
AjuI GAANNNNNNNTTGG 2 cut(s) 3705, 3737
AloI GAACNNNNNNTCC 2 cut(s) 4908, 4940
Alw21I GWGCWC 3 cut(s) 700, 2941, 3160
Alw26I GTCTC 8 cut(s) 807, 1704, 2456, 2700, 3024, 4178, 4895, 5077
AlwI GGATC 8 cut(s) 207, 1907, 2045, 2114, 2127, 2448, 3585, 3598
Ama87I CYCGRG 4 cut(s) 3024, 3074, 4965, 5113
Aor13HI TCCGGA 2 cut(s) 1033, 2764
Aor51HI AGCGCT 1 cut(s) 2257
AseI ATTAAT 2 cut(s) 1340, 4701
AsiGI ACCGGT 1 cut(s) 372
Asp700I GAANNNNTTC 3 cut(s) 658, 2550, 3474
Asp718I GGTACC 2 cut(s) 1880, 2279
AspLEI GCGC 3 cut(s) 2258, 3696, 4641
AspS9I GGNCC 5 cut(s) 2185, 2362, 3115, 4968, 5008
AsuHPI GGTGA 9 cut(s) 944, 1408, 2612, 2993, 3806, 3962, 4010, 4193, 4601
AvaI CYCGRG 4 cut(s) 3024, 3074, 4965, 5113
AvaII GGWCC 3 cut(s) 2362, 3115, 5008
BaeGI GKGCMC 2 cut(s) 2132, 2182
BaeI ACNNNNGTAYC 2 cut(s) 150, 183
BalI TGGCCA 4 cut(s) 2100, 2811, 4009, 4125
BamHI GGATCC 2 cut(s) 2119, 3590
BanI GGYRCC 4 cut(s) 191, 1880, 2127, 2279
BanII GRGCYC 3 cut(s) 786, 2219, 4111
BauI CACGAG 1 cut(s) 3757
BbsI GAAGAC 5 cut(s) 421, 1509, 2156, 2786, 4350
Bbv12I GWGCWC 3 cut(s) 700, 2941, 3160
BceAI ACGGC 5 cut(s) 278, 886, 3603, 4815, 5051
BcgI CGANNNNNNTGC 4 cut(s) 2189, 2223, 3268, 3302
BciVI GTATCC 2 cut(s) 2076, 4414
BclI TGATCA 1 cut(s) 4741
BcoDI GTCTC 8 cut(s) 807, 1704, 2456, 2700, 3024, 4178, 4895, 5077
BfaI CTAG 9 cut(s) 315, 1626, 2718, 3446, 3978, 4631, 4736, 4767, 5052
BfmI CTRYAG 3 cut(s) 543, 2232, 5094
BfoI RGCGCY 2 cut(s) 2259, 4642
BfuAI ACCTGC 3 cut(s) 31, 3212, 4167
BfuI GTATCC 2 cut(s) 2076, 4414
BglI GCCNNNNNGGC 1 cut(s) 2647
BglII AGATCT 2 cut(s) 2228, 3283
BlpI GCTNAGC 3 cut(s) 780, 1521, 4329
BmcAI AGTACT 1 cut(s) 3653
Bme18I GGWCC 3 cut(s) 2362, 3115, 5008
BmeT110I CYCGRG 4 cut(s) 3024, 3074, 4965, 5113
BmgT120I GGNCC 5 cut(s) 2185, 2362, 3115, 4968, 5008
BmrI ACTGGG 1 cut(s) 1526
BmuI ACTGGG 1 cut(s) 1526
BpiI GAAGAC 5 cut(s) 421, 1509, 2156, 2786, 4350
BplI GAGNNNNNCTC 2 cut(s) 1417, 1449
BpmI CTGGAG 7 cut(s) 258, 465, 693, 1460, 1518, 2286, 4821
Bpu10I CCTNAGC 3 cut(s) 2562, 3963, 4790
Bpu1102I GCTNAGC 3 cut(s) 780, 1521, 4329
BpuEI CTTGAG 2 cut(s) 1353, 4070
Bsa29I ATCGAT 1 cut(s) 1246
BsaAI YACGTR 2 cut(s) 179, 4907
BsaI GGTCTC 3 cut(s) 2456, 4178, 4895
BsaWI WCCGGW 4 cut(s) 372, 1033, 1775, 2764
BsaXI ACNNNNNCTCC 4 cut(s) 4875, 4905, 4908, 4938
Bsc4I CCNNNNNNNGG 8 cut(s) 53, 482, 731, 1121, 1982, 3791, 4966, 5003
Bse118I RCCGGY 1 cut(s) 372
Bse3DI GCAATG 6 cut(s) 1354, 2850, 3879, 4243, 4678, 4832
BseAI TCCGGA 2 cut(s) 1033, 2764
BseCI ATCGAT 1 cut(s) 1246
BseLI CCNNNNNNNGG 8 cut(s) 53, 482, 731, 1121, 1982, 3791, 4966, 5003
BseMI GCAATG 6 cut(s) 1354, 2850, 3879, 4243, 4678, 4832
BseRI GAGGAG 1 cut(s) 3042
BseSI GKGCMC 2 cut(s) 2132, 2182
BseYI CCCAGC 1 cut(s) 1139
BsgI GTGCAG 1 cut(s) 4035
BshNI GGYRCC 4 cut(s) 191, 1880, 2127, 2279
BshTI ACCGGT 1 cut(s) 372
BshVI ATCGAT 1 cut(s) 1246
BsiHKAI GWGCWC 3 cut(s) 700, 2941, 3160
BsiHKCI CYCGRG 4 cut(s) 3024, 3074, 4965, 5113
BsiSI CCGG 4 cut(s) 373, 1034, 1776, 2765
BslFI GGGAC 7 cut(s) 70, 1156, 1162, 1426, 2348, 3064, 5021
BslI CCNNNNNNNGG 8 cut(s) 53, 482, 731, 1121, 1982, 3791, 4966, 5003
BsmAI GTCTC 8 cut(s) 807, 1704, 2456, 2700, 3024, 4178, 4895, 5077
BsmFI GGGAC 7 cut(s) 70, 1156, 1162, 1426, 2348, 3064, 5021
BsmI GAATGC 3 cut(s) 2959, 4150, 4475
Bso31I GGTCTC 3 cut(s) 2456, 4178, 4895
BsoBI CYCGRG 4 cut(s) 3024, 3074, 4965, 5113
Bsp1286I GDGCHC 8 cut(s) 700, 786, 2132, 2182, 2219, 2941, 3160, 4111
Bsp13I TCCGGA 2 cut(s) 1033, 2764
Bsp1407I TGTACA 1 cut(s) 1556
Bsp1720I GCTNAGC 3 cut(s) 780, 1521, 4329
Bsp19I CCATGG 3 cut(s) 195, 690, 2466
BspDI ATCGAT 1 cut(s) 1246
BspEI TCCGGA 2 cut(s) 1033, 2764
BspHI TCATGA 1 cut(s) 202
BspMAI CTGCAG 1 cut(s) 5098
BspMI ACCTGC 3 cut(s) 31, 3212, 4167
BspPI GGATC 8 cut(s) 207, 1907, 2045, 2114, 2127, 2448, 3585, 3598
BspT107I GGYRCC 4 cut(s) 191, 1880, 2127, 2279
BspTNI GGTCTC 3 cut(s) 2456, 4178, 4895
BsrBI CCGCTC 1 cut(s) 2270
BsrDI GCAATG 6 cut(s) 1354, 2850, 3879, 4243, 4678, 4832
BsrFI RCCGGY 1 cut(s) 372
BsrGI TGTACA 1 cut(s) 1556
BssAI RCCGGY 1 cut(s) 372
BssNAI GTATAC 1 cut(s) 3201
BssSI CACGAG 1 cut(s) 3757
BssT1I CCWWGG 5 cut(s) 52, 195, 690, 2466, 3516
Bst1107I GTATAC 1 cut(s) 3201
Bst2BI CACGAG 1 cut(s) 3757
Bst6I CTCTTC 3 cut(s) 1023, 1210, 3090
BstAPI GCANNNNNTGC 3 cut(s) 1597, 4245, 4290
BstAUI TGTACA 1 cut(s) 1556
BstBAI YACGTR 2 cut(s) 179, 4907
BstC8I GCNNGC 9 cut(s) 611, 874, 1580, 3192, 4473, 4527, 4637, 4818, 4972
BstDSI CCRYGG 4 cut(s) 195, 690, 2466, 2788
BstENI CCTNNNNNAGG 1 cut(s) 480
BstH2I RGCGCY 2 cut(s) 2259, 4642
BstHHI GCGC 3 cut(s) 2258, 3696, 4641
BstMAI GTCTC 8 cut(s) 807, 1704, 2456, 2700, 3024, 4178, 4895, 5077
BstSFI CTRYAG 3 cut(s) 543, 2232, 5094
BstSLI GKGCMC 2 cut(s) 2132, 2182
BstV2I GAAGAC 5 cut(s) 421, 1509, 2156, 2786, 4350
BstX2I RGATCY 4 cut(s) 2119, 2228, 3283, 3590
BstXI CCANNNNNNTGG 2 cut(s) 865, 3587
BstYI RGATCY 4 cut(s) 2119, 2228, 3283, 3590
BstZ17I GTATAC 1 cut(s) 3201
Bsu15I ATCGAT 1 cut(s) 1246
BsuI GTATCC 2 cut(s) 2076, 4414
BsuTUI ATCGAT 1 cut(s) 1246
BtgI CCRYGG 4 cut(s) 195, 690, 2466, 2788
BtgZI GCGATG 1 cut(s) 2972
BtsI GCAGTG 2 cut(s) 570, 2212
BveI ACCTGC 3 cut(s) 31, 3212, 4167
Cac8I GCNNGC 9 cut(s) 611, 874, 1580, 3192, 4473, 4527, 4637, 4818, 4972
CciI TCATGA 1 cut(s) 202
CfoI GCGC 3 cut(s) 2258, 3696, 4641
Cfr10I RCCGGY 1 cut(s) 372
Cfr13I GGNCC 5 cut(s) 2185, 2362, 3115, 4968, 5008
ClaI ATCGAT 1 cut(s) 1246
CseI GACGC 3 cut(s) 975, 1526, 4809
CsiI ACCWGGT 1 cut(s) 2578
CspAI ACCGGT 1 cut(s) 372
CspCI CAANNNNNGTGG 6 cut(s) 745, 748, 780, 783, 3730, 3765
DraI TTTAAA 2 cut(s) 2193, 3331
DrdI GACNNNNNNGTC 1 cut(s) 1813
DseDI GACNNNNNNGTC 1 cut(s) 1813
EaeI YGGCCR 6 cut(s) 912, 2098, 2648, 2809, 4007, 4123
Eam1104I CTCTTC 3 cut(s) 1023, 1210, 3090
EarI CTCTTC 3 cut(s) 1023, 1210, 3090
EciI GGCGGA 2 cut(s) 3187, 5071
Eco130I CCWWGG 5 cut(s) 52, 195, 690, 2466, 3516
Eco147I AGGCCT 2 cut(s) 172, 3137
Eco24I GRGCYC 3 cut(s) 786, 2219, 4111
Eco31I GGTCTC 3 cut(s) 2456, 4178, 4895
Eco32I GATATC 3 cut(s) 638, 3667, 4027
Eco47I GGWCC 3 cut(s) 2362, 3115, 5008
Eco47III AGCGCT 1 cut(s) 2257
Eco57I CTGAAG 7 cut(s) 441, 1830, 3066, 3242, 3359, 3809, 4896
Eco88I CYCGRG 4 cut(s) 3024, 3074, 4965, 5113
EcoNI CCTNNNNNAGG 1 cut(s) 480
EcoO109I RGGNCCY 1 cut(s) 5008
EcoRI GAATTC 3 cut(s) 2851, 2866, 4454
EcoRV GATATC 3 cut(s) 638, 3667, 4027
EcoT14I CCWWGG 5 cut(s) 52, 195, 690, 2466, 3516
EcoT22I ATGCAT 2 cut(s) 615, 4173
EcoT38I GRGCYC 3 cut(s) 786, 2219, 4111
ErhI CCWWGG 5 cut(s) 52, 195, 690, 2466, 3516
FalI AAGNNNNNCTT 4 cut(s) 559, 591, 2524, 2556
FaqI GGGAC 7 cut(s) 70, 1156, 1162, 1426, 2348, 3064, 5021
FauI CCCGC 5 cut(s) 493, 1611, 2078, 4518, 4997
FauNDI CATATG 2 cut(s) 864, 3770
FbaI TGATCA 1 cut(s) 4741
FblI GTMKAC 2 cut(s) 960, 3200
FriOI GRGCYC 3 cut(s) 786, 2219, 4111
FspBI CTAG 9 cut(s) 315, 1626, 2718, 3446, 3978, 4631, 4736, 4767, 5052
FspI TGCGCA 1 cut(s) 3695
GlaI GCGC 3 cut(s) 2257, 3695, 4640
GsaI CCCAGC 1 cut(s) 1143
GsuI CTGGAG 7 cut(s) 258, 465, 693, 1460, 1518, 2286, 4821
HaeII RGCGCY 2 cut(s) 2259, 4642
HapII CCGG 4 cut(s) 373, 1034, 1776, 2765
HgaI GACGC 3 cut(s) 975, 1526, 4809
HhaI GCGC 3 cut(s) 2258, 3696, 4641
Hin6I GCGC 3 cut(s) 2256, 3694, 4639
HinP1I GCGC 3 cut(s) 2256, 3694, 4639
HincII GTYRAC 6 cut(s) 29, 378, 742, 1201, 3436, 4719
HindII GTYRAC 6 cut(s) 29, 378, 742, 1201, 3436, 4719
HindIII AAGCTT 1 cut(s) 2894
HpaI GTTAAC 3 cut(s) 742, 1201, 4719
HpaII CCGG 4 cut(s) 373, 1034, 1776, 2765
HphI GGTGA 9 cut(s) 944, 1408, 2612, 2993, 3806, 3962, 4010, 4193, 4601
Hpy99I CGWCG 3 cut(s) 652, 907, 4825
HpyCH4IV ACGT 7 cut(s) 178, 319, 1070, 1902, 1954, 4602, 4906
HpySE526I ACGT 7 cut(s) 178, 319, 1070, 1902, 1954, 4602, 4906
HspAI GCGC 3 cut(s) 2256, 3694, 4639
Kpn2I TCCGGA 2 cut(s) 1033, 2764
KpnI GGTACC 2 cut(s) 1884, 2283
Ksp22I TGATCA 1 cut(s) 4741
KspAI GTTAAC 3 cut(s) 742, 1201, 4719
MabI ACCWGGT 1 cut(s) 2578
MaeI CTAG 9 cut(s) 315, 1626, 2718, 3446, 3978, 4631, 4736, 4767, 5052
MaeII ACGT 7 cut(s) 178, 319, 1070, 1902, 1954, 4602, 4906
MbiI CCGCTC 1 cut(s) 2270
MfeI CAATTG 3 cut(s) 789, 2041, 4772
MflI RGATCY 4 cut(s) 2119, 2228, 3283, 3590
MhlI GDGCHC 8 cut(s) 700, 786, 2132, 2182, 2219, 2941, 3160, 4111
MlsI TGGCCA 4 cut(s) 2100, 2811, 4009, 4125
MluNI TGGCCA 4 cut(s) 2100, 2811, 4009, 4125
MmeI TCCRAC 9 cut(s) 442, 882, 919, 1633, 2953, 3419, 3518, 4110, 4906
Mox20I TGGCCA 4 cut(s) 2100, 2811, 4009, 4125
Mph1103I ATGCAT 2 cut(s) 615, 4173
MroI TCCGGA 2 cut(s) 1033, 2764
MroXI GAANNNNTTC 3 cut(s) 658, 2550, 3474
MscI TGGCCA 4 cut(s) 2100, 2811, 4009, 4125
MslI CAYNNNNRTG 6 cut(s) 831, 2471, 2627, 2787, 4547, 5075
Msp20I TGGCCA 4 cut(s) 2100, 2811, 4009, 4125
MspA1I CMGCKG 4 cut(s) 278, 2073, 3322, 4896
MspI CCGG 4 cut(s) 373, 1034, 1776, 2765
MunI CAATTG 3 cut(s) 789, 2041, 4772
Mva1269I GAATGC 3 cut(s) 2959, 4150, 4475
NcoI CCATGG 3 cut(s) 195, 690, 2466
NdeI CATATG 2 cut(s) 864, 3770
NsbI TGCGCA 1 cut(s) 3695
NsiI ATGCAT 2 cut(s) 615, 4173
PaeI GCATGC 2 cut(s) 613, 4820
PaeR7I CTCGAG 1 cut(s) 3074
PagI TCATGA 1 cut(s) 202
PceI AGGCCT 2 cut(s) 172, 3137
PciI ACATGT 5 cut(s) 18, 249, 849, 1886, 4595
PcsI WCGNNNNNNNCGW 2 cut(s) 1908, 3708
PctI GAATGC 3 cut(s) 2959, 4150, 4475
PdmI GAANNNNTTC 3 cut(s) 658, 2550, 3474
PflFI GACNNNGTC 1 cut(s) 4887
PfoI TCCNGGA 1 cut(s) 481
PinAI ACCGGT 1 cut(s) 372
Ppu21I YACGTR 2 cut(s) 179, 4907
PpuMI RGGWCCY 1 cut(s) 5008
PscI ACATGT 5 cut(s) 18, 249, 849, 1886, 4595
PshBI ATTAAT 2 cut(s) 1340, 4701
PsiI TTATAA 1 cut(s) 3015
Psp5II RGGWCCY 1 cut(s) 5008
PspFI CCCAGC 1 cut(s) 1139
PspPI GGNCC 5 cut(s) 2185, 2362, 3115, 4968, 5008
PspPPI RGGWCCY 1 cut(s) 5008
PstI CTGCAG 1 cut(s) 5098
PsuI RGATCY 4 cut(s) 2119, 2228, 3283, 3590
PsyI GACNNNGTC 1 cut(s) 4887
PvuII CAGCTG 1 cut(s) 278
RseI CAYNNNNRTG 6 cut(s) 831, 2471, 2627, 2787, 4547, 5075
Sau96I GGNCC 5 cut(s) 2185, 2362, 3115, 4968, 5008
ScaI AGTACT 1 cut(s) 3653
SduI GDGCHC 8 cut(s) 700, 786, 2132, 2182, 2219, 2941, 3160, 4111
SexAI ACCWGGT 1 cut(s) 2578
SfcI CTRYAG 3 cut(s) 543, 2232, 5094
Sfr274I CTCGAG 1 cut(s) 3074
SinI GGWCC 3 cut(s) 2362, 3115, 5008
SlaI CTCGAG 1 cut(s) 3074
SmiMI CAYNNNNRTG 6 cut(s) 831, 2471, 2627, 2787, 4547, 5075
SmlI CTYRAG 3 cut(s) 1368, 3074, 4085
SmoI CTYRAG 3 cut(s) 1368, 3074, 4085
SphI GCATGC 2 cut(s) 613, 4820
SseBI AGGCCT 2 cut(s) 172, 3137
SspI AATATT 1 cut(s) 4387
SspMI CTAG 9 cut(s) 315, 1626, 2718, 3446, 3978, 4631, 4736, 4767, 5052
StuI AGGCCT 2 cut(s) 172, 3137
StyI CCWWGG 5 cut(s) 52, 195, 690, 2466, 3516
TaiI ACGT 7 cut(s) 181, 322, 1073, 1905, 1957, 4605, 4909
TatI WGTACW 6 cut(s) 225, 707, 1556, 2924, 2961, 3651
TauI GCSGC 3 cut(s) 67, 914, 4863
TspGWI ACGGA 4 cut(s) 1751, 1978, 2777, 4433
Tth111I GACNNNGTC 1 cut(s) 4887
VpaK11BI GGWCC 3 cut(s) 2362, 3115, 5008
VspI ATTAAT 2 cut(s) 1340, 4701
XagI CCTNNNNNAGG 1 cut(s) 480
XbaI TCTAGA 1 cut(s) 2717
XcmI CCANNNNNNNNNTGG 3 cut(s) 869, 1683, 4310
XhoI CTCGAG 1 cut(s) 3074
XmiI GTMKAC 2 cut(s) 960, 3200
XmnI GAANNNNTTC 3 cut(s) 658, 2550, 3474
XspI CTAG 9 cut(s) 315, 1626, 2718, 3446, 3978, 4631, 4736, 4767, 5052
ZrmI AGTACT 1 cut(s) 3653
Zsp2I ATGCAT 2 cut(s) 615, 4173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.