Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0003246

Physical Location & Seq

Genomic Coordinates Forward (+)

15124029 .. 15128657

Gene Structure 4629 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1157200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2616 bp

ATGGTTAGTGCGCTTGTTAATTTGTCTTCAGAAGGACCAAATGCTGTTCAAACAATTTCACCTAGAAGCACATCTCGTCCCCCCAATTCATCTAGTGCTGTTTTTGGATCTTCTAATGGCAATCAGGAGAAACAGTTCAAAAATCAACAGAGATGGCTTTTGTTCTTGCGCCATGCTCGGCGTTGTTCAGCCCATGAAGGGAAATGTCGCGAACGTAATTGTGTAACTGTTCAACAATTGTTAAAGCACATGGTAACATGCAATTTACCTCAATGCCCACATCCTCGTTGTCATGTTACCAAGAAATTGGTTCATCATAACAAGACTTGCAAGGACCCAGCTTGCCCTGTTTGCTCGCCTGTGAGGAATTATCTGCTGAGACATCCAAATAAGGCACACAATCATCTAGTTTCTGATTCTGGTTTGCAGAATTCAATAAATGGATCATGTAAAGCCTATGATAGTGAAGACGCTTCAGCTAGATTGGTTTTGAAGACAAATCCGGCTGTTGAAACTTCTGAAGATATGCAACTTTCTATAAAACGCATGAAGATAGAGCAGTCCTCTCAACCTGTTCTTTCCGATAGTGTTAGTTCTGCAGTAAAAGTTTCTGCGATTATTGAACCCCATGTACCCCAGGATATACAGATTCAGGATTACCAACATGGTGAGATTTCTATGCCAGTCAAGTCCGAGGTTGCAAAAGTGAAAATGGAGGTTCCTTCAAGTTCTGGACAACGGAGTGTTGATGAGATGAAGGATATTGTTGAGGATAACTGCAATCAAAGGCATGAAGGTGAACCTGTCTCATATAATGAGCCCGCTGGTTTAGCTAAGCAAGAAAACATAAAACTTGAGAATGAAACTTATCCAGCTAAACAAGAAAATGCTACGCATACTGTGGAAAATGCAGCTGGAACAAAGTCTGGGAAGCCTAAAATAAAGGGGGTATCAATGACTGAACTGTTCACTCCGGAGCAAGTTAGGGCCCACATTACAGGTCTCAGGCAGTGGGTTGGCCAGAGCAAAGCAAAGGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTTGAGAAGCTTACATTTGAGCCACCGCCCATATATTGCACACCTTGCGGTGTTCGTATCAAGCGCAATGCAATGTACTATACAATGGGGGCTGGTGACACACGACATTATTTCTGTATTCCATGCTATAATGAGGCTCGTGGAGACATGATAGTTGTTGATGGGAATAACATTCCAAAGGCAAGGCTAGAGAAGAAGAAAAATGATGAAGAGACTGAAGAGTGGTGGGTCCAATGTGACAAATGCGAAGCTTGGCAACATCAAATTTGTGCTTTGTTTAATGGCCGAAGGAATGATGGTGGGCAAGCCGAATACACTTGCCCTAATTGTTATATACAAGAGGTTGAAAGGGGAGAGCGTAAACCTTTACCACAGAATGCTGTTCTGGGGGCCAAAGATTTGCCAAGGACAATACTGAGTGACCACATAGAGCAATGGTTATTTAAGAAACTGAAGGTTGAAAGACAAGAGAGGGCAAGGCAGCAGGGAAAGAGTTATGATGAGGTTCCTGGGGCAGAATCGCTTGTAATCAGGGTTGTTTCGTCGGTTGACAAAAAATTGGAAGTAAAGCAGCGGTTCCTTGAAATTTTTCAGGAAGAAAATTATCCAACAGAGTTCCCATATAAATCTAAGGTTGTATTGTTGTTTCAGAAAATTGAAGGTGTAGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGAGCTGAAAGCCATTTTCCAAATCAGCGCCGTGTTTATCTATCGTACTTGGATTCTGTTAAGTATTTCAGGCCTGAGGTTAAAGCGGTCACGGGAGAGGCTCTCCGCACATATGTTTACCATGAAATTTTGATTGGATACCTTGAATATTGCAAGCTACGAGGGTTTACAAGCTGCTATATATGGGCTTGTCCTCCGTTGAAGGGTGAAGATTATATTCTATATTGTCATCCGGAGATTCAGAAAACACCAAAATCTGATAAGCTTCGTGAATGGTATTTGGCAATGCTTAGGAAAGCTGCCAAGGAAGGCATTGTTGTTGAACTCACTAATCTATATGACCATTTCTTTGTAACTACTGCTGAATGCAAGGCCAAAGTCACTGCAGCTAGGCTGCCCTATTTTGATGGTGACTACTGGCCTGGTGCAGCCGAGGATCTGATTAATCAGATGCGTCAAGAAGAGGACGGGAGAAAACAGAATAAGAAAGGATCAACCAAAAAGACTATAACAAAAAGGGCTCTAAAAGCTTCTGGTCAGACTGATCTTTCTGCTAACGCGTCAAAGGATCTGCTACTAATGCACAAACTTGGAGAAACCATTTCGCCAATGAAGGAGGATTTCATCATGGTTCATTTGCAGTACGCATGCTCCCACTGTTGTATACTAATGGTATCAGGAAACCGTTGGTCCTGCACTCAATGCAGAAATTTTCAGCTTTGTGACAATTTGTTTGGAGAAGAAGGGACGAAGGTTCTGGTATTGTTGCTAATTGAGTTCAAGGTTCTGTTAGAATTTGCGGACAGTTTGATCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004402 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009791 GO:0009908 GO:0009987 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0061733 GO:0071704 GO:0071840 GO:0090567 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04024 ko04066 ko04068 ko04110 ko04310 ko04330 ko04350 ko04520 ko04630 ko04720 ko04916 ko04919 ko04922 ko05016 ko05152 ko05161 ko05164 ko05165 ko05166 ko05167 ko05168 ko05169 ko05200 ko05203 ko05206 ko05211 ko05215 map04024 map04066 map04068 map04110 map04310 map04330 map04350 map04520 map04630 map04720 map04916 map04919 map04922 map05016 map05152 map05161 map05164 map05165 map05166 map05167 map05168 map05169 map05200 map05203 map05206 map05211 map05215

Pfam Domains

Protein Families

HAT_KAT11 PHD ZZ zf-TAZ

Protein Analysis

872

Amino Acids

98.88

Weight (kDa)

8.27

Isoelectric Point (pI)

50.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-TAZ	PF02135	49 - 118	9.8e-16	TAZ zinc finger
PHD	PF00628	435 - 475	4e-06	PHD-finger
HAT_KAT11	PF08214	533 - 761	4.8e-39	Histone acetylation protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003246)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G79000 AT1G79000 AT1G79000
fragaria_vesca	FvH4_6g36320 FvH4_6g36320 FvH4_6g36320 FvH4_6g36320 FvH4_6g36320 FvH4_6g36320 FvH4_6g36320
malus_domestica	MD09G1170000.v1.1 MD17G1157200.v1.1 MD17G1157500.v1.1
prunus_persica	Prupe.3G028200_v2.0.a1 Prupe.3G028200_v2.0.a1 Prupe.3G028200_v2.0.a1
pyrus_communis	pycom09g08750 pycom17g15040
rosa_chinensis	RchiOBHm_Chr2g0148331
rosa_laevigata	RLG00000020340
rosa_roxburghii	Rroxscaffold_2G00098860
rosa_rugosa	Rorug02G0405800
rosa_samantha	Rh2AG464900 Rh2BG477500 Rh2CG451300 Rh2DG486400
rosa_wichuraiana	Rw2G037880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	2461
AccII	CGCG	2 cut(s)	210, 2357
AccIII	TCCGGA	2 cut(s)	973, 2029
AciI	CCGC	7 cut(s)	822, 1121, 1143, 1669, 1883, 1903, 2597
AclWI	GGATC	5 cut(s)	115, 451, 2241, 2296, 2373
AcoI	YGGCCR	2 cut(s)	1018, 1378
AcsI	RAATTY	7 cut(s)	430, 1359, 1680, 1793, 1923, 2506, 2591
AcuI	CTGAAG	5 cut(s)	12, 459, 540, 1332, 1568
AfaI	GTAC	4 cut(s)	633, 1172, 1844, 2441
AfiI	CCNNNNNNNGG	2 cut(s)	198, 2000
AflIII	ACRYGT	1 cut(s)	2355
AjnI	CCWGG	3 cut(s)	636, 1603, 2218
AjuI	GAANNNNNNNTTGG	2 cut(s)	1914, 1946
AloI	GAACNNNNNNTCC	2 cut(s)	119, 151
Alw26I	GTCTC	5 cut(s)	373, 811, 1007, 1233, 1301
AlwI	GGATC	5 cut(s)	115, 451, 2241, 2296, 2373
Aor13HI	TCCGGA	2 cut(s)	973, 2029
AoxI	GGCC	7 cut(s)	987, 1018, 1378, 1485, 1868, 2169, 2216
ApaI	GGGCCC	1 cut(s)	991
ApeKI	GCWGC	8 cut(s)	911, 1576, 1666, 1971, 2096, 2183, 2191, 2225
ApoI	RAATTY	7 cut(s)	430, 1359, 1680, 1793, 1923, 2506, 2591
ArsI	GACNNNNNNTTYG	4 cut(s)	2129, 2161, 2513, 2545
AseI	ATTAAT	1 cut(s)	2241
Asp700I	GAANNNNTTC	2 cut(s)	134, 1683
AspLEI	GCGC	4 cut(s)	13, 171, 1161, 1827
AspS9I	GGNCC	7 cut(s)	35, 334, 987, 988, 1324, 1485, 2487
AsuHPI	GGTGA	6 cut(s)	51, 680, 809, 1202, 2015, 2219
AvaII	GGWCC	4 cut(s)	35, 334, 1324, 2487
AxyI	CCTNAGG	1 cut(s)	1872
BaeGI	GKGCMC	1 cut(s)	991
BalI	TGGCCA	1 cut(s)	1020
BanII	GRGCYC	3 cut(s)	822, 991, 2320
BauI	CACGAG	1 cut(s)	1233
BbsI	GAAGAC	3 cut(s)	18, 474, 500
BbvI	GCAGC	8 cut(s)	923, 1588, 1678, 1958, 2083, 2178, 2195, 2237
BccI	CCATC	4 cut(s)	147, 1250, 1385, 2198
BceAI	ACGGC	1 cut(s)	1812
BciT130I	CCWGG	3 cut(s)	638, 1605, 2220
BciVI	GTATCC	1 cut(s)	1928
BclI	TGATCA	1 cut(s)	2607
BcoDI	GTCTC	5 cut(s)	373, 811, 1007, 1233, 1301
BfaI	CTAG	6 cut(s)	63, 93, 407, 480, 1283, 2187
BfmI	CTRYAG	2 cut(s)	597, 2181
BfoI	RGCGCY	1 cut(s)	1828
BfuI	GTATCC	1 cut(s)	1928
BglI	GCCNNNNNGGC	1 cut(s)	1776
BisI	GCNGC	8 cut(s)	912, 1577, 1667, 1972, 2097, 2184, 2192, 2226
BlpI	GCTNAGC	1 cut(s)	834
BlsI	GCNGC	8 cut(s)	913, 1578, 1668, 1973, 2098, 2185, 2193, 2227
Bme1390I	CCNGG	3 cut(s)	638, 1605, 2220
Bme18I	GGWCC	4 cut(s)	35, 334, 1324, 2487
BmgT120I	GGNCC	7 cut(s)	35, 334, 987, 988, 1324, 1485, 2487
BmiI	GGNNCC	7 cut(s)	336, 720, 989, 1325, 1486, 1602, 1673
BmrFI	CCNGG	3 cut(s)	638, 1605, 2220
BmsI	GCATC	1 cut(s)	2238
BpiI	GAAGAC	3 cut(s)	18, 474, 500
BplI	GAGNNNNNCTC	4 cut(s)	548, 580, 1884, 1916
Bpu10I	CCTNAGC	1 cut(s)	2087
Bpu1102I	GCTNAGC	1 cut(s)	834
BpuEI	CTTGAG	1 cut(s)	875
BsaI	GGTCTC	1 cut(s)	1007
BsaJI	CCNNGG	6 cut(s)	636, 693, 1499, 1604, 2100, 2229
BsaWI	WCCGGW	2 cut(s)	973, 2029
BsaXI	ACNNNNNCTCC	4 cut(s)	119, 149, 2432, 2462
Bsc4I	CCNNNNNNNGG	2 cut(s)	198, 2000
Bse1I	ACTGG	2 cut(s)	683, 2219
Bse21I	CCTNAGG	1 cut(s)	1872
Bse3DI	GCAATG	5 cut(s)	1059, 1168, 1173, 1535, 2088
BseAI	TCCGGA	2 cut(s)	973, 2029
BseBI	CCWGG	3 cut(s)	638, 1605, 2220
BseDI	CCNNGG	6 cut(s)	636, 693, 1499, 1604, 2100, 2229
BseGI	GGATG	3 cut(s)	280, 382, 2026
BseLI	CCNNNNNNNGG	2 cut(s)	198, 2000
BseMI	GCAATG	5 cut(s)	1059, 1168, 1173, 1535, 2088
BseMII	CTCAG	4 cut(s)	368, 1018, 1502, 1863
BseNI	ACTGG	2 cut(s)	683, 2219
BseSI	GKGCMC	1 cut(s)	991
BseXI	GCAGC	8 cut(s)	923, 1588, 1678, 1958, 2083, 2178, 2195, 2237
BseYI	CCCAGC	1 cut(s)	337
BsgI	GTGCAG	3 cut(s)	1113, 2244, 2476
Bsh1236I	CGCG	2 cut(s)	210, 2357
BshFI	GGCC	7 cut(s)	989, 1020, 1380, 1487, 1870, 2171, 2218
BsiSI	CCGG	3 cut(s)	503, 974, 2030
BslFI	GGGAC	2 cut(s)	63, 2557
BslI	CCNNNNNNNGG	2 cut(s)	198, 2000
BsmAI	GTCTC	5 cut(s)	373, 811, 1007, 1233, 1301
BsmFI	GGGAC	2 cut(s)	63, 2557
BsmI	GAATGC	3 cut(s)	1060, 1477, 2168
BsnI	GGCC	7 cut(s)	989, 1020, 1380, 1487, 1870, 2171, 2218
Bso31I	GGTCTC	1 cut(s)	1007
Bsp120I	GGGCCC	1 cut(s)	987
Bsp1286I	GDGCHC	3 cut(s)	822, 991, 2320
Bsp13I	TCCGGA	2 cut(s)	973, 2029
Bsp143I	GATC	7 cut(s)	107, 443, 2233, 2288, 2341, 2365, 2607
Bsp1720I	GCTNAGC	1 cut(s)	834
Bsp68I	TCGCGA	1 cut(s)	210
BspACI	CCGC	7 cut(s)	822, 1121, 1143, 1669, 1883, 1903, 2597
BspANI	GGCC	7 cut(s)	989, 1020, 1380, 1487, 1870, 2171, 2218
BspCNI	CTCAG	4 cut(s)	369, 1017, 1503, 1864
BspEI	TCCGGA	2 cut(s)	973, 2029
BspFNI	CGCG	2 cut(s)	210, 2357
BspLI	GGNNCC	7 cut(s)	336, 720, 989, 1325, 1486, 1602, 1673
BspMAI	CTGCAG	2 cut(s)	601, 2185
BspPI	GGATC	5 cut(s)	115, 451, 2241, 2296, 2373
BspTNI	GGTCTC	1 cut(s)	1007
BsrDI	GCAATG	5 cut(s)	1059, 1168, 1173, 1535, 2088
BsrI	ACTGG	2 cut(s)	683, 2219
BssECI	CCNNGG	6 cut(s)	636, 693, 1499, 1604, 2100, 2229
BssMI	GATC	7 cut(s)	107, 443, 2233, 2288, 2341, 2365, 2607
BssNAI	GTATAC	1 cut(s)	2462
BssSI	CACGAG	1 cut(s)	1233
BssT1I	CCWWGG	2 cut(s)	1499, 2100
Bst1107I	GTATAC	1 cut(s)	2462
Bst2BI	CACGAG	1 cut(s)	1233
Bst2UI	CCWGG	3 cut(s)	638, 1605, 2220
Bst4CI	ACNGT	7 cut(s)	135, 229, 901, 966, 2456, 2483, 2603
Bst6I	CTCTTC	3 cut(s)	1299, 1308, 2253
BstAPI	GCANNNNNTGC	2 cut(s)	1140, 2499
BstC8I	GCNNGC	6 cut(s)	343, 356, 822, 1401, 1952, 2446
BstDEI	CTNAG	7 cut(s)	377, 834, 1004, 1511, 1725, 1872, 2087
BstF5I	GGATG	3 cut(s)	280, 382, 2026
BstFNI	CGCG	2 cut(s)	210, 2357
BstH2I	RGCGCY	1 cut(s)	1828
BstHHI	GCGC	4 cut(s)	13, 171, 1161, 1827
BstKTI	GATC	7 cut(s)	110, 446, 2236, 2291, 2344, 2368, 2610
BstMAI	GTCTC	5 cut(s)	373, 811, 1007, 1233, 1301
BstMBI	GATC	7 cut(s)	107, 443, 2233, 2288, 2341, 2365, 2607
BstMWI	GCNNNNNNNGC	7 cut(s)	351, 830, 1140, 1776, 2324, 2377, 2499
BstNI	CCWGG	3 cut(s)	638, 1605, 2220
BstNSI	RCATGY	3 cut(s)	261, 1783, 2448
BstSCI	CCNGG	3 cut(s)	636, 1603, 2218
BstSFI	CTRYAG	2 cut(s)	597, 2181
BstSLI	GKGCMC	1 cut(s)	991
BstUI	CGCG	2 cut(s)	210, 2357
BstV1I	GCAGC	8 cut(s)	923, 1588, 1678, 1958, 2083, 2178, 2195, 2237
BstV2I	GAAGAC	3 cut(s)	18, 474, 500
BstX2I	RGATCY	3 cut(s)	107, 2233, 2365
BstXI	CCANNNNNNTGG	1 cut(s)	307
BstYI	RGATCY	3 cut(s)	107, 2233, 2365
BstZ17I	GTATAC	1 cut(s)	2462
Bsu36I	CCTNAGG	1 cut(s)	1872
BsuI	GTATCC	1 cut(s)	1928
BsuRI	GGCC	7 cut(s)	989, 1020, 1380, 1487, 1870, 2171, 2218
BtsCI	GGATG	3 cut(s)	280, 382, 2026
BtsI	GCAGTG	2 cut(s)	1016, 2178
BtsIMutI	CAGTG	3 cut(s)	1016, 2178, 2452
BtuMI	TCGCGA	1 cut(s)	210
Cac8I	GCNNGC	6 cut(s)	343, 356, 822, 1401, 1952, 2446
CfoI	GCGC	4 cut(s)	13, 171, 1161, 1827
Cfr13I	GGNCC	7 cut(s)	35, 334, 987, 988, 1324, 1485, 2487
CseI	GACGC	3 cut(s)	479, 2240, 2346
Csp6I	GTAC	4 cut(s)	632, 1171, 1843, 2440
CviQI	GTAC	4 cut(s)	632, 1171, 1843, 2440
DdeI	CTNAG	7 cut(s)	377, 834, 1004, 1511, 1725, 1872, 2087
DpnI	GATC	7 cut(s)	109, 445, 2235, 2290, 2343, 2367, 2609
DpnII	GATC	7 cut(s)	107, 443, 2233, 2288, 2341, 2365, 2607
EaeI	YGGCCR	2 cut(s)	1018, 1378
Eam1104I	CTCTTC	3 cut(s)	1299, 1308, 2253
EarI	CTCTTC	3 cut(s)	1299, 1308, 2253
Eco130I	CCWWGG	2 cut(s)	1499, 2100
Eco147I	AGGCCT	1 cut(s)	1870
Eco24I	GRGCYC	3 cut(s)	822, 991, 2320
Eco31I	GGTCTC	1 cut(s)	1007
Eco47I	GGWCC	4 cut(s)	35, 334, 1324, 2487
Eco57I	CTGAAG	5 cut(s)	12, 459, 540, 1332, 1568
Eco81I	CCTNAGG	1 cut(s)	1872
EcoO109I	RGGNCCY	2 cut(s)	334, 987
EcoRI	GAATTC	1 cut(s)	430
EcoRII	CCWGG	3 cut(s)	636, 1603, 2218
EcoT14I	CCWWGG	2 cut(s)	1499, 2100
EcoT38I	GRGCYC	3 cut(s)	822, 991, 2320
ErhI	CCWWGG	2 cut(s)	1499, 2100
FaqI	GGGAC	2 cut(s)	63, 2557
FauI	CCCGC	1 cut(s)	829
FauNDI	CATATG	1 cut(s)	1909
FbaI	TGATCA	1 cut(s)	2607
FblI	GTMKAC	1 cut(s)	2461
Fnu4HI	GCNGC	8 cut(s)	912, 1577, 1667, 1972, 2097, 2184, 2192, 2226
FokI	GGATG	3 cut(s)	267, 369, 2013
FriOI	GRGCYC	3 cut(s)	822, 991, 2320
Fsp4HI	GCNGC	8 cut(s)	912, 1577, 1667, 1972, 2097, 2184, 2192, 2226
FspBI	CTAG	6 cut(s)	63, 93, 407, 480, 1283, 2187
GlaI	GCGC	4 cut(s)	12, 170, 1160, 1826
GluI	GCNGC	8 cut(s)	912, 1577, 1667, 1972, 2097, 2184, 2192, 2226
GsaI	CCCAGC	1 cut(s)	341
HaeII	RGCGCY	1 cut(s)	1828
HaeIII	GGCC	7 cut(s)	989, 1020, 1380, 1487, 1870, 2171, 2218
HapII	CCGG	3 cut(s)	503, 974, 2030
HgaI	GACGC	3 cut(s)	479, 2240, 2346
HhaI	GCGC	4 cut(s)	13, 171, 1161, 1827
Hin6I	GCGC	4 cut(s)	11, 169, 1159, 1825
HinP1I	GCGC	4 cut(s)	11, 169, 1159, 1825
HincII	GTYRAC	1 cut(s)	1645
HindII	GTYRAC	1 cut(s)	1645
HindIII	AAGCTT	4 cut(s)	1103, 1344, 2060, 2325
HinfI	GANTC	6 cut(s)	416, 649, 1045, 1613, 1850, 2035
HpaII	CCGG	3 cut(s)	503, 974, 2030
HphI	GGTGA	6 cut(s)	51, 680, 809, 1202, 2015, 2219
Hpy166II	GTNNAC	7 cut(s)	800, 969, 1457, 1645, 1915, 1965, 2462
Hpy8I	GTNNAC	7 cut(s)	800, 969, 1457, 1645, 1915, 1965, 2462
Hpy99I	CGWCG	1 cut(s)	1642
HpyCH4III	ACNGT	7 cut(s)	135, 229, 901, 966, 2456, 2483, 2603
HpyCH4IV	ACGT	1 cut(s)	214
HpyF10VI	GCNNNNNNNGC	7 cut(s)	351, 830, 1140, 1776, 2324, 2377, 2499
HpyF3I	CTNAG	7 cut(s)	377, 834, 1004, 1511, 1725, 1872, 2087
HpySE526I	ACGT	1 cut(s)	214
HspAI	GCGC	4 cut(s)	11, 169, 1159, 1825
Kpn2I	TCCGGA	2 cut(s)	973, 2029
Ksp22I	TGATCA	1 cut(s)	2607
Kzo9I	GATC	7 cut(s)	107, 443, 2233, 2288, 2341, 2365, 2607
LmnI	GCTCC	4 cut(s)	976, 1057, 1799, 2453
Lsp1109I	GCAGC	8 cut(s)	923, 1588, 1678, 1958, 2083, 2178, 2195, 2237
LweI	GCATC	1 cut(s)	2238
MaeI	CTAG	6 cut(s)	63, 93, 407, 480, 1283, 2187
MaeII	ACGT	1 cut(s)	214
MalI	GATC	7 cut(s)	109, 445, 2235, 2290, 2343, 2367, 2609
MboI	GATC	7 cut(s)	107, 443, 2233, 2288, 2341, 2365, 2607
MfeI	CAATTG	1 cut(s)	236
MflI	RGATCY	3 cut(s)	107, 2233, 2365
MhlI	GDGCHC	3 cut(s)	822, 991, 2320
MlsI	TGGCCA	1 cut(s)	1020
MluI	ACGCGT	1 cut(s)	2355
MluNI	TGGCCA	1 cut(s)	1020
MmeI	TCCRAC	1 cut(s)	1727
Mox20I	TGGCCA	1 cut(s)	1020
MroI	TCCGGA	2 cut(s)	973, 2029
MroXI	GAANNNNTTC	2 cut(s)	134, 1683
MscI	TGGCCA	1 cut(s)	1020
MseI	TTAA	8 cut(s)	18, 242, 1374, 1539, 1857, 1878, 2241, 2614
MslI	CAYNNNNRTG	1 cut(s)	795
Msp20I	TGGCCA	1 cut(s)	1020
MspA1I	CMGCKG	3 cut(s)	824, 914, 1669
MspI	CCGG	3 cut(s)	503, 974, 2030
MspR9I	CCNGG	3 cut(s)	638, 1605, 2220
MunI	CAATTG	1 cut(s)	236
Mva1269I	GAATGC	3 cut(s)	1060, 1477, 2168
MvaI	CCWGG	3 cut(s)	638, 1605, 2220
MvnI	CGCG	2 cut(s)	210, 2357
MwoI	GCNNNNNNNGC	7 cut(s)	351, 830, 1140, 1776, 2324, 2377, 2499
NdeI	CATATG	1 cut(s)	1909
NdeII	GATC	7 cut(s)	107, 443, 2233, 2288, 2341, 2365, 2607
NlaIV	GGNNCC	7 cut(s)	336, 720, 989, 1325, 1486, 1602, 1673
NmeAIII	GCCGAG	2 cut(s)	157, 2254
NmuCI	GTSAC	7 cut(s)	1190, 1331, 1514, 1885, 2176, 2207, 2519
NruI	TCGCGA	1 cut(s)	210
NspI	RCATGY	3 cut(s)	261, 1783, 2448
PaeI	GCATGC	1 cut(s)	2448
PceI	AGGCCT	1 cut(s)	1870
PctI	GAATGC	3 cut(s)	1060, 1477, 2168
PdmI	GAANNNNTTC	2 cut(s)	134, 1683
PfeI	GAWTC	6 cut(s)	416, 649, 1045, 1613, 1850, 2035
PkrI	GCNGC	8 cut(s)	913, 1578, 1668, 1973, 2098, 2185, 2193, 2227
PpuMI	RGGWCCY	1 cut(s)	334
PshBI	ATTAAT	1 cut(s)	2241
Psp5II	RGGWCCY	1 cut(s)	334
Psp6I	CCWGG	3 cut(s)	636, 1603, 2218
PspFI	CCCAGC	1 cut(s)	337
PspGI	CCWGG	3 cut(s)	636, 1603, 2218
PspN4I	GGNNCC	7 cut(s)	336, 720, 989, 1325, 1486, 1602, 1673
PspOMI	GGGCCC	1 cut(s)	987
PspPI	GGNCC	7 cut(s)	35, 334, 987, 988, 1324, 1485, 2487
PspPPI	RGGWCCY	1 cut(s)	334
PsrI	GAACNNNNNNTAC	2 cut(s)	615, 647
PstI	CTGCAG	2 cut(s)	601, 2185
PsuI	RGATCY	3 cut(s)	107, 2233, 2365
PvuII	CAGCTG	1 cut(s)	914
RruI	TCGCGA	1 cut(s)	210
RsaI	GTAC	4 cut(s)	633, 1172, 1844, 2441
RsaNI	GTAC	4 cut(s)	632, 1171, 1843, 2440
RseI	CAYNNNNRTG	1 cut(s)	795
SaqAI	TTAA	8 cut(s)	18, 242, 1374, 1539, 1857, 1878, 2241, 2614
SatI	GCNGC	8 cut(s)	912, 1577, 1667, 1972, 2097, 2184, 2192, 2226
Sau3AI	GATC	7 cut(s)	107, 443, 2233, 2288, 2341, 2365, 2607
Sau96I	GGNCC	7 cut(s)	35, 334, 987, 988, 1324, 1485, 2487
ScrFI	CCNGG	3 cut(s)	638, 1605, 2220
SduI	GDGCHC	3 cut(s)	822, 991, 2320
SfaNI	GCATC	1 cut(s)	2238
SfcI	CTRYAG	2 cut(s)	597, 2181
SinI	GGWCC	4 cut(s)	35, 334, 1324, 2487
SmiMI	CAYNNNNRTG	1 cut(s)	795
SmlI	CTYRAG	1 cut(s)	854
SmoI	CTYRAG	1 cut(s)	854
SphI	GCATGC	1 cut(s)	2448
SseBI	AGGCCT	1 cut(s)	1870
SsiI	CCGC	7 cut(s)	822, 1121, 1143, 1669, 1883, 1903, 2597
SspI	AATATT	1 cut(s)	1946
SspMI	CTAG	6 cut(s)	63, 93, 407, 480, 1283, 2187
StuI	AGGCCT	1 cut(s)	1870
StyD4I	CCNGG	3 cut(s)	636, 1603, 2218
StyI	CCWWGG	2 cut(s)	1499, 2100
TaaI	ACNGT	7 cut(s)	135, 229, 901, 966, 2456, 2483, 2603
TaiI	ACGT	1 cut(s)	217
TatI	WGTACW	1 cut(s)	1170
TfiI	GAWTC	6 cut(s)	416, 649, 1045, 1613, 1850, 2035
Tru1I	TTAA	8 cut(s)	18, 242, 1374, 1539, 1857, 1878, 2241, 2614
Tru9I	TTAA	8 cut(s)	18, 242, 1374, 1539, 1857, 1878, 2241, 2614
TscAI	CASTG	3 cut(s)	1016, 2185, 2459
TseFI	GTSAC	7 cut(s)	1190, 1331, 1514, 1885, 2176, 2207, 2519
TseI	GCWGC	8 cut(s)	911, 1576, 1666, 1971, 2096, 2183, 2191, 2225
Tsp45I	GTSAC	7 cut(s)	1190, 1331, 1514, 1885, 2176, 2207, 2519
TspGWI	ACGGA	2 cut(s)	754, 1983
TspRI	CASTG	3 cut(s)	1016, 2185, 2459
VpaK11BI	GGWCC	4 cut(s)	35, 334, 1324, 2487
VspI	ATTAAT	1 cut(s)	2241
XapI	RAATTY	7 cut(s)	430, 1359, 1680, 1793, 1923, 2506, 2591
XceI	RCATGY	3 cut(s)	261, 1783, 2448
XmiI	GTMKAC	1 cut(s)	2461
XmnI	GAANNNNTTC	2 cut(s)	134, 1683
XspI	CTAG	6 cut(s)	63, 93, 407, 480, 1283, 2187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.