Prupe.3G028200_v2.0.a1

Histone acetyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
2102287 .. 2115057
12771 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G028200.2

Sequence Viewer

Length: 5220 bp
ATGAATGTGCAGACACACATGTCAGGACAGATATCTGGGCAGGTGCCCAATCAGGCAGGCACTCAGATGCCTGTGCTGCCCCAACATAATGGAAATTCCCTTCCTCCCCAAATGCAAAACTTAGGTGGGCCTGCTCGTGCTATGTCTAACATGGATCCTGAGATTCCCACATTACGTTCAATTATGCAAGAAAAGATCTGTCAAATTATACAGCAGCGGCAACATCCCCAGCCAATGAGTGACACAAAGTTTAGGGAGTTTGTTAAAAAATTGGAAGAGGGTTTGTTGCGAAATGCTCAAACAAAGGATGACTATATGAACATGGAAACGTTGGAGAGTCGTTTGCAAAATTTGATGAAACCACCCCAAAACCAGAGCCAACAGTATCAACAGCTTGTTAATTCTTCCTCTCCTATTGGTACAATGATACCGACCCCTGGTATGTCACACAATGGGAACTCAAATATGATGGTTAGTTCTTCTGTGGATGCTTCTATGAACACTACAAGAGGAAGTACTAGCATTGCACCTACTACAGTCAACACAGGGAACCTGTTGCCTGCTGGCCCCTTACCTGGCGGTTCATTCAATAGATCTGACGGTTCTATGTCTAATGGATATCAGCAATCTCCTGCCAGTTTCTCCATTGGTACTGGAGGAAACATGTCATCAATGGGTGTGCAAAGAATTACTAGCCAAATGATTCCTACTCCTGGGTTTAATAGCAGTAGTAATCAGTCTTACATGAATTTGGAATCTTCAAATAATGGGGGTGGGTTCTCTACTGTTGATTCTTCAATGGTAACACAGCCACAACAGCAAAAGCAGCATATTGGTGGTCAAAATAGCCGTATACTTCATAATGTTGGCAGCCAAATGGGCAGTGGAATAAGGTCTGGCATGCAGCAGAAACCTTATGGGTTGCCAAATGGGGCTCTAAATGGTGGGTTGGGATTGATTGGGAACAATTTACCACTGGTTAATGAATCTGGCACTTCTGAGGGCTATATGGCATTAACACCTTATGCTAACTCTTCCAAACCATCACAACACTTTGATCAACATCAGCGGCCTATAATGCAAGGTGATAGCTATGGAATGAGTAATGCTGATTCATTTGGGCCTGGAAACTACTATGGTGCTGCAACGCCTGTTGGGTCAATGTTAAATGCTCAGAATTTGAATTCAGTCAGCTCAACAGCTATATCCAAGACCAACCCTCCCCTTATAAGTAATCAGTCGAATATGCACGGTGCACAACAAAGTGTACATGTGAAGCCTCAACAACTTGATCAGTTAGAAAAGATAAATTTCCAAACTCCTCTATCTTCAAGAGAGAATATCCTCCATTCTCATCAACAGCAACAATTTCAACATCAACCTAATCAGTTTCAACAGCAGCAGCAATTAGTTCACCAGCAACGTCAACAGAAGCAGCAGAATCCGCAGCGCCAGCAGATGTTAAACAATGATGCTTTTGGTCAGTCTCAAATGACATCTGATCTCAGCAGTGCAAAGCGTGATATGGACCACCATAATGAAGCTATGCACCAACAAGCTACAGAACCGTTTCGATTATCGGAGATGCATAACCAATTCCATCAGCACTCTGTTGAAGATCGTTTGAGGAATGCTCAGCATATCCCATCCGGTCAACATGATATCTCCTCTTCATTGTCTCAAACTTCTCAGCAAATGCAACAAATATTGCAGCCCCACCAATTGGTTGCAGAGTCTCAAAATGATTTCAGATCTCTCTCTGTTGGAGCTCAATCAGAACCAGTACTGCAAGGTCAATGGCATCCTCAATTGCAAGATGGGAGTCACAGACAGGCCAACATGTCCCATGAGCAGCATGTCCATGAAGATTTCCGTCAGAGGATATCTGGGCAAGATGAAGCTCAGTGTAATAATTCATCTTCAGAAGGACCTAATGTTGTTCAAAATATGGGGTCTAGAAGCATATCTCGTCCCCCCAATTCATCGAGTGCTGCTTCTAGATCTGGTTATGTCAATCGAGATAAATGGTTTCTAAATCAACAGAGATGGCTTCTGTTAATGCTCCATGCTCGTTGTTGTACAGCCCCTGAAGGGAAATGTCGAGAAGCTCGTTGTGTAATTGTTCAAAAATTGGTGCAGCACATGAAGTCCTGCGAATCTTCTCAATGCACATATAGTCGTTGTCGTATTTCAAAGTTATTGGTTCTACATAGCCAGACTTGCAAAAGCAAAAAAGCTTGCCCCGTTTGTGGCCCTGTGTTGAATTATCTGAATAAGGAAAAGAACCGTCGAGTTTCTGATTCCGGTTTGCAGAACTCAATAAATGGATCCGGTAAAGTCTATGATAGTGGGGACACTTCTGCTAGATTGGTTTTGAAGACGGCTCCGGTTGTTGAAACTTCTGAGGATCGGCAACCTTCTATGAAACGCATGAAAATAGAGCAGTCCTCTCAATCTGTTGTTCCTGATAGTGTTAGTGTTAGTTCTGCAGTAAAAGTTTCTGCCATTAGCGAACCCCATGTATCTGAGGATATACAGATTCACGATTACCAACATAGTGAGATTTCTATGCCAGTTAAATCCGAGTTTGCAGAAGTGAAAATGGAAATTCCTGTAAGTTCTGGGCAAGGGAGTCTTGATGAGATGAAGGATAGTGTTGATGATAACTGCAATTCAAGGCATGATGGTGAAGCTGTTTCATATAATGAGCCTGCTGTTTTAGCGAGACAAGAAAACATCAAACTTGAGAAAGAAACTGATCCAGCTAAACAAGAAAATGTTGCCCAGCCTGTGGAAAATGCAGCTGCAACCAAGTCTGGGAAGCCTAAAATAAAGGGGGTGTCAATGACTGAACTTTTCACTCCGGAGCAAGTAAGGGCGCACATTACAGGTCTCAGGCAGTGGGTTGGCCAGAGCAAAGCGAAGGCAGAGAAAAATCAAGCAATGGAGAATTCAATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTTGAGAAGCTTACCTTTGAGCCACCACCAATATATTGCACACCTTGTGGCGCTCGTATCAAGCGCAACGCGATGTATTATACTATGGGGGCTGGTGACACACGACATTATTTCTGTATTCCATGCTATAACGAGGCTCGTGGAGACACTATAGTTGTTGATGGGACTGCGATTCCAAAGGCAAGGCTGGAGAAGAAGAAAAATGATGAGGAGACTGAAGAATGGTGGGTCCAATGTGACAAATGCGAAGCTTGGCAACACCAGATTTGTGCTTTGTTTAATGGCCGAAGAAATGATGGTGGGCAAGCTGAATACACTTGCCCTAATTGCTATATACAAGAGGTTGAGAGGGGAGAGCGTAAGCCTTTACCACAGAGTGCTGTTCTGGGGGCCAAAGATTTACCGAGGACAATACTGAGTGACCATATAGAGCAACGGTTATTTAAGAAACTGAAGGTGGAAAGACAAGAGAGGGCGAGGCAGCAAGGAAAAAGTTATGATGAGGTTCCTGGGGCAGAATCACTTGTAATTAGAGTTGTTTCATCAGTTGACAAAAAATTGGAAGTGAAGCAGCGGTTTCTTGAAATTTTTCAGGAAGAAAATTATCCTACAGAGTTCCCATATAAATCTAAGGTTGTATTATTGTTTCAGAAAATTGAAGGTGTAGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGAGCTGAATGTCAATTTCCAAATCAGCGCCGTGTATATCTATCGTATTTGGATTCTGTTAAGTATTTCAGGCCCGAAGTTAAAGCGGTGACGGGAGAAGCTCTCCGCACATTTGTTTACCATGAAATTCTTATTGGATACCTTGAATATTGCAAGAAACGAGGGTTTACAAGCTGCTACATATGGGCTTGTCCTCCTTTGAAGGGTGAAGATTATATTTTATATTGTCATCCGGAAATTCAGAAAACACCAAAATCAGATAAGCTTCGTGAATGGTATTTGGCAATGCTCAGGAAAGCTGCCAAGGAAAGCATTGTTGTTGAACTCACTAATCTATATGATCATTTCTTTGTTACTACTGCTGAATGCAAGGCTAAAGTCACTGCAGCTAGGCTGCCTTATTTTGATGGTGACTACTGGCCTGGTGCAGCTGAGGATCTGATTTATCAGATGCGTCAAGAAGAGGATGGGAGAAAACAGAATAAGAAAGGAACAACCAAAAAGACTATAACAAAAAGGGCTTTAAAAGCGTCTGGTCAGACTGATCTTTCTGGTAACGCGTCAAAGGATCTGCTACTAATGCACAAACTTGGTGAAACCATTTGCCCGATGAAGGAAGATTTCATCATGGTTCATTTGCAGTATGCGTGCTCTCACTGTTGTATACTAATGGTATCAGGAAACCGTTGGTCCTGCACCCAATGCAAAAATTTTCAGCTTTGTGATAAGTGTTATGAAGCAGAGCAAAAGCGGGAAGAAAGAGACAGGCACCCTTCCAATCAGAGGGAAAAACATGAATTGCGTCCTTTTGACATTACTGATGTACCTGCTGACACAAAGGACAAAGACGAGATTCTTGAGAGTGAATTCTTTGACACCAGACAGGCATTTCTCAGTCTTTGTCAAGGGAATCATTATCAGTATGATACTCTACGGCGGGCTAAACATTCCTCTATGATGGTCCTTTACCATCTTCATAACCCAACTGCTCCTGCATTTGTGACAACATGCAATATATGTCATCTCGACATTGAAACAGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAATATGATGTATGCAACAATTGTTATCAGAAGGAAGGAGGTGTAGATCATCATCATAAATTGACAAATCATCCATCCATAGCTGATCGTGATGCACAAAACAAAGAAGCTAGGCAAATGCGAGTTTTACAGCTTAGGAAAATGCTTGATCTTCTGGTGCACGCATCACAATGTCGTTCAGCACAATGTCAGTACCCCAATTGTCGTAAGGTGAAGGGGCTTTTCCGCCATGGAATTCAATGCAAAGTCCGGGCATCTGGAGGATGTGTTCTCTGTAAGAAAATGTGGTATCTCCTTCAACTTCATGCTCGAGCTTGCAAAGAATCCGAGTGCCATGTGCCACGCTGCAGAGATTTAAAGGAACATTTGAGGAGGCTGCAGCAGCAGTCTGATTCACGAAGAAGAGCTGCTGTTATGGAGATGATGAGACAGAGAGCTGCCGAGCTACACAACAATACTGGGTGA

Protein Analysis

1740

Amino Acids

195.98

Weight (kDa)

8.42

Isoelectric Point (pI)

57.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1229
AarI CACCTGC 1 cut(s) 31
AasI GACNNNNNNGTC 1 cut(s) 19
Acc36I ACCTGC 2 cut(s) 31, 4522
AccB1I GGYRCC 2 cut(s) 43, 4455
AccB7I CCANNNNNTGG 2 cut(s) 1723, 2791
AccI GTMKAC 2 cut(s) 853, 4351
AccII CGCG 2 cut(s) 3056, 4247
AccIII TCCGGA 2 cut(s) 2863, 3919
AclI AACGTT 1 cut(s) 329
AclWI GGATC 8 cut(s) 149, 162, 2322, 2335, 2415, 2753, 4131, 4263
AcoI YGGCCR 2 cut(s) 2908, 3268
AcuI CTGAAG 4 cut(s) 1905, 2109, 3222, 3458
AdeI CACNNNGTG 2 cut(s) 3032, 3362
AfaI GTAC 8 cut(s) 421, 517, 652, 1269, 1785, 2080, 4512, 4949
AflIII ACRYGT 5 cut(s) 18, 663, 1270, 1839, 4245
AjnI CCWGG 6 cut(s) 436, 574, 712, 1123, 3493, 4108
AjuI GAANNNNNNNTTGG 2 cut(s) 3804, 3836
AloI GAACNNNNNNTCC 2 cut(s) 5007, 5039
Alw21I GWGCWC 4 cut(s) 1258, 1771, 4340, 4917
Alw26I GTCTC 9 cut(s) 1491, 1683, 1740, 2719, 2897, 3123, 3191, 4443, 5176
Alw44I GTGCAC 2 cut(s) 1254, 4913
AlwI GGATC 8 cut(s) 149, 162, 2322, 2335, 2415, 2753, 4131, 4263
AlwNI CAGNNNCTG 1 cut(s) 2087
Ama87I CYCGRG 1 cut(s) 5064
Aor13HI TCCGGA 2 cut(s) 2863, 3919
ApaLI GTGCAC 2 cut(s) 1254, 4913
Asp700I GAANNNNTTC 2 cut(s) 1569, 3573
AspLEI GCGC 5 cut(s) 1452, 2881, 3038, 3051, 3717
AsuC2I CCSGG 1 cut(s) 5006
AsuHPI GGTGA 9 cut(s) 1097, 1406, 2699, 3092, 3787, 3905, 4109, 4292, 4978
AvaI CYCGRG 1 cut(s) 5064
AvaII GGWCC 5 cut(s) 1528, 1928, 3214, 4377, 4648
BaeGI GKGCMC 3 cut(s) 48, 1258, 4917
BaeI ACNNNNGTAYC 2 cut(s) 4494, 4527
BalI TGGCCA 1 cut(s) 2910
BamHI GGATCC 2 cut(s) 154, 2327
BanI GGYRCC 2 cut(s) 43, 4455
BanII GRGCYC 2 cut(s) 937, 1771
BauI CACGAG 2 cut(s) 135, 3123
BbsI GAAGAC 1 cut(s) 2384
Bbv12I GWGCWC 4 cut(s) 1258, 1771, 4340, 4917
BbvCI CCTCAGC 1 cut(s) 4119
BceAI ACGGC 4 cut(s) 834, 2397, 3702, 4637
BciT130I CCWGG 6 cut(s) 438, 576, 714, 1125, 3495, 4110
BciVI GTATCC 1 cut(s) 3818
BclI TGATCA 3 cut(s) 1057, 1291, 4027
BcnI CCSGG 1 cut(s) 5006
BcoDI GTCTC 9 cut(s) 1491, 1683, 1740, 2719, 2897, 3123, 3191, 4443, 5176
BfaI CTAG 7 cut(s) 519, 693, 1956, 1998, 2364, 4077, 4866
BfmI CTRYAG 8 cut(s) 534, 1560, 2487, 3135, 3594, 4071, 5101, 5132
BfoI RGCGCY 3 cut(s) 1453, 3039, 3718
BfuAI ACCTGC 2 cut(s) 31, 4522
BfuI GTATCC 1 cut(s) 3818
BglI GCCNNNNNGGC 2 cut(s) 879, 3666
BglII AGATCT 4 cut(s) 195, 593, 1751, 2000
BlpI GCTNAGC 1 cut(s) 1635
BmcAI AGTACT 2 cut(s) 517, 1785
Bme1390I CCNGG 7 cut(s) 438, 576, 714, 1125, 3495, 4110, 5006
Bme18I GGWCC 5 cut(s) 1528, 1928, 3214, 4377, 4648
BmeT110I CYCGRG 1 cut(s) 5064
BmrFI CCNGG 7 cut(s) 438, 576, 714, 1125, 3495, 4110, 5006
BmsI GCATC 9 cut(s) 57, 478, 1462, 1575, 1810, 4128, 4837, 4928, 5018
BpiI GAAGAC 1 cut(s) 2384
BplI GAGNNNNNCTC 6 cut(s) 1618, 1650, 2432, 2464, 3774, 3806
BpmI CTGGAG 3 cut(s) 675, 3194, 5034
Bpu10I CCTNAGC 3 cut(s) 3977, 4119, 4889
Bpu1102I GCTNAGC 1 cut(s) 1635
BpuEI CTTGAG 2 cut(s) 2765, 4565
BpuMI CCSGG 1 cut(s) 5006
BsaBI GATNNNNATC 2 cut(s) 1062, 4806
BsaI GGTCTC 1 cut(s) 2897
BsaJI CCNNGG 6 cut(s) 436, 713, 3389, 3494, 3990, 4984
BsaWI WCCGGW 6 cut(s) 1649, 2303, 2330, 2386, 2863, 3919
BsaXI ACNNNNNCTCC 4 cut(s) 1204, 1234, 5007, 5037
Bse1I ACTGG 7 cut(s) 636, 658, 981, 1781, 2573, 4109, 5218
Bse3DI GCAATG 3 cut(s) 522, 2949, 3978
Bse8I GATNNNNATC 2 cut(s) 1062, 4806
BseAI TCCGGA 2 cut(s) 2863, 3919
BseBI CCWGG 6 cut(s) 438, 576, 714, 1125, 3495, 4110
BseDI CCNNGG 6 cut(s) 436, 713, 3389, 3494, 3990, 4984
BseJI GATNNNNATC 2 cut(s) 1062, 4806
BseMI GCAATG 3 cut(s) 522, 2949, 3978
BseNI ACTGG 7 cut(s) 636, 658, 981, 1781, 2573, 4109, 5218
BseRI GAGGAG 4 cut(s) 1311, 1657, 3209, 5140
BseSI GKGCMC 3 cut(s) 48, 1258, 4917
BseYI CCCAGC 2 cut(s) 228, 2784
BsgI GTGCAG 5 cut(s) 29, 2156, 3003, 4134, 4366
Bsh1236I CGCG 2 cut(s) 3056, 4247
BshNI GGYRCC 2 cut(s) 43, 4455
BsiHKAI GWGCWC 4 cut(s) 1258, 1771, 4340, 4917
BsiHKCI CYCGRG 1 cut(s) 5064
BsiSI CCGG 7 cut(s) 1650, 2304, 2331, 2387, 2864, 3920, 5005
BslFI GGGAC 4 cut(s) 1828, 1956, 2366, 3163
BsmAI GTCTC 9 cut(s) 1491, 1683, 1740, 2719, 2897, 3123, 3191, 4443, 5176
BsmFI GGGAC 4 cut(s) 1828, 1956, 2366, 3163
BsmI GAATGC 2 cut(s) 1636, 4058
Bso31I GGTCTC 1 cut(s) 2897
BsoBI CYCGRG 1 cut(s) 5064
Bsp1286I GDGCHC 6 cut(s) 48, 937, 1258, 1771, 4340, 4917
Bsp13I TCCGGA 2 cut(s) 2863, 3919
Bsp1407I TGTACA 2 cut(s) 1267, 2078
Bsp1720I GCTNAGC 1 cut(s) 1635
Bsp19I CCATGG 1 cut(s) 4984
BspEI TCCGGA 2 cut(s) 2863, 3919
BspFNI CGCG 2 cut(s) 3056, 4247
BspMAI CTGCAG 4 cut(s) 2491, 4075, 5105, 5136
BspMI ACCTGC 2 cut(s) 31, 4522
BspPI GGATC 8 cut(s) 149, 162, 2322, 2335, 2415, 2753, 4131, 4263
BspQI GCTCTTC 1 cut(s) 5152
BspT107I GGYRCC 2 cut(s) 43, 4455
BspTNI GGTCTC 1 cut(s) 2897
BsrDI GCAATG 3 cut(s) 522, 2949, 3978
BsrGI TGTACA 2 cut(s) 1267, 2078
BsrI ACTGG 7 cut(s) 636, 658, 981, 1781, 2573, 4109, 5218
BssECI CCNNGG 6 cut(s) 436, 713, 3389, 3494, 3990, 4984
BssNAI GTATAC 2 cut(s) 854, 4352
BssSI CACGAG 2 cut(s) 135, 3123
BssT1I CCWWGG 2 cut(s) 3990, 4984
Bst1107I GTATAC 2 cut(s) 854, 4352
Bst2BI CACGAG 2 cut(s) 135, 3123
Bst2UI CCWGG 6 cut(s) 438, 576, 714, 1125, 3495, 4110
Bst6I CTCTTC 5 cut(s) 270, 1039, 1675, 4143, 5152
BstAPI GCANNNNNTGC 1 cut(s) 4389
BstAUI TGTACA 2 cut(s) 1267, 2078
BstDSI CCRYGG 1 cut(s) 4984
BstFNI CGCG 2 cut(s) 3056, 4247
BstH2I RGCGCY 3 cut(s) 1453, 3039, 3718
BstHHI GCGC 5 cut(s) 1452, 2881, 3038, 3051, 3717
BstMAI GTCTC 9 cut(s) 1491, 1683, 1740, 2719, 2897, 3123, 3191, 4443, 5176
BstNI CCWGG 6 cut(s) 438, 576, 714, 1125, 3495, 4110
BstNSI RCATGY 8 cut(s) 22, 667, 904, 1274, 1843, 1859, 3673, 4698
BstSCI CCNGG 7 cut(s) 436, 574, 712, 1123, 3493, 4108, 5004
BstSFI CTRYAG 8 cut(s) 534, 1560, 2487, 3135, 3594, 4071, 5101, 5132
BstSLI GKGCMC 3 cut(s) 48, 1258, 4917
BstUI CGCG 2 cut(s) 3056, 4247
BstV2I GAAGAC 1 cut(s) 2384
BstX2I RGATCY 8 cut(s) 154, 195, 593, 1751, 2000, 2327, 4123, 4255
BstXI CCANNNNNNTGG 1 cut(s) 89
BstYI RGATCY 8 cut(s) 154, 195, 593, 1751, 2000, 2327, 4123, 4255
BstZ17I GTATAC 2 cut(s) 854, 4352
BsuI GTATCC 1 cut(s) 3818
BtgI CCRYGG 1 cut(s) 4984
BtgZI GCGATG 1 cut(s) 3071
BtsI GCAGTG 4 cut(s) 889, 1516, 2906, 4068
BtsIMutI CAGTG 7 cut(s) 889, 974, 1516, 1910, 2906, 4068, 4342
BveI ACCTGC 2 cut(s) 31, 4522
CaiI CAGNNNCTG 1 cut(s) 2087
CfoI GCGC 5 cut(s) 1452, 2881, 3038, 3051, 3717
CseI GACGC 4 cut(s) 4130, 4206, 4236, 4478
Csp6I GTAC 8 cut(s) 420, 516, 651, 1268, 1784, 2079, 4511, 4948
CviQI GTAC 8 cut(s) 420, 516, 651, 1268, 1784, 2079, 4511, 4948
DraI TTTAAA 2 cut(s) 4212, 5112
DraIII CACNNNGTG 2 cut(s) 3032, 3362
DrdI GACNNNNNNGTC 1 cut(s) 19
DseDI GACNNNNNNGTC 1 cut(s) 19
EaeI YGGCCR 2 cut(s) 2908, 3268
Eam1104I CTCTTC 5 cut(s) 270, 1039, 1675, 4143, 5152
EarI CTCTTC 5 cut(s) 270, 1039, 1675, 4143, 5152
EciI GGCGGA 1 cut(s) 4970
Ecl136II GAGCTC 1 cut(s) 1769
Eco130I CCWWGG 2 cut(s) 3990, 4984
Eco24I GRGCYC 2 cut(s) 937, 1771
Eco31I GGTCTC 1 cut(s) 2897
Eco32I GATATC 4 cut(s) 33, 620, 1663, 1884
Eco47I GGWCC 5 cut(s) 1528, 1928, 3214, 4377, 4648
Eco53kI GAGCTC 1 cut(s) 1769
Eco57I CTGAAG 4 cut(s) 1905, 2109, 3222, 3458
Eco88I CYCGRG 1 cut(s) 5064
EcoICRI GAGCTC 1 cut(s) 1769
EcoO109I RGGNCCY 1 cut(s) 1928
EcoRI GAATTC 4 cut(s) 1183, 2950, 4553, 4989
EcoRII CCWGG 6 cut(s) 436, 574, 712, 1123, 3493, 4108
EcoRV GATATC 4 cut(s) 33, 620, 1663, 1884
EcoT14I CCWWGG 2 cut(s) 3990, 4984
EcoT22I ATGCAT 1 cut(s) 1590
EcoT38I GRGCYC 2 cut(s) 937, 1771
ErhI CCWWGG 2 cut(s) 3990, 4984
FalI AAGNNNNNCTT 4 cut(s) 2619, 2651, 2984, 3016
FaqI GGGAC 4 cut(s) 1828, 1956, 2366, 3163
FauI CCCGC 2 cut(s) 4431, 4617
FauNDI CATATG 1 cut(s) 3869
FbaI TGATCA 3 cut(s) 1057, 1291, 4027
FblI GTMKAC 2 cut(s) 853, 4351
FriOI GRGCYC 2 cut(s) 937, 1771
FspBI CTAG 7 cut(s) 519, 693, 1956, 1998, 2364, 4077, 4866
GlaI GCGC 5 cut(s) 1451, 2880, 3037, 3050, 3716
GsaI CCCAGC 2 cut(s) 232, 2788
GsuI CTGGAG 3 cut(s) 675, 3194, 5034
HaeII RGCGCY 3 cut(s) 1453, 3039, 3718
HapII CCGG 7 cut(s) 1650, 2304, 2331, 2387, 2864, 3920, 5005
HgaI GACGC 4 cut(s) 4130, 4206, 4236, 4478
HhaI GCGC 5 cut(s) 1452, 2881, 3038, 3051, 3717
Hin6I GCGC 5 cut(s) 1450, 2879, 3036, 3049, 3715
HinP1I GCGC 5 cut(s) 1450, 2879, 3036, 3049, 3715
HincII GTYRAC 4 cut(s) 541, 1427, 1655, 3535
HindII GTYRAC 4 cut(s) 541, 1427, 1655, 3535
HindIII AAGCTT 4 cut(s) 2235, 2993, 3234, 3950
HpaII CCGG 7 cut(s) 1650, 2304, 2331, 2387, 2864, 3920, 5005
HphI GGTGA 9 cut(s) 1097, 1406, 2699, 3092, 3787, 3905, 4109, 4292, 4978
Hpy99I CGWCG 1 cut(s) 2292
HpyCH4IV ACGT 3 cut(s) 175, 329, 1423
HpySE526I ACGT 3 cut(s) 175, 329, 1423
HspAI GCGC 5 cut(s) 1450, 2879, 3036, 3049, 3715
Kpn2I TCCGGA 2 cut(s) 2863, 3919
Ksp22I TGATCA 3 cut(s) 1057, 1291, 4027
LguI GCTCTTC 1 cut(s) 5152
LmnI GCTCC 6 cut(s) 1766, 2067, 2389, 2866, 3689, 4681
LweI GCATC 9 cut(s) 57, 478, 1462, 1575, 1810, 4128, 4837, 4928, 5018
MaeI CTAG 7 cut(s) 519, 693, 1956, 1998, 2364, 4077, 4866
MaeII ACGT 3 cut(s) 175, 329, 1423
MfeI CAATTG 4 cut(s) 1721, 1808, 4774, 4954
MflI RGATCY 8 cut(s) 154, 195, 593, 1751, 2000, 2327, 4123, 4255
MhlI GDGCHC 6 cut(s) 48, 937, 1258, 1771, 4340, 4917
MlsI TGGCCA 1 cut(s) 2910
MluI ACGCGT 1 cut(s) 4245
MluNI TGGCCA 1 cut(s) 2910
MlyI GAGTC 4 cut(s) 346, 1742, 1831, 2641
MmeI TCCRAC 2 cut(s) 312, 1744
Mox20I TGGCCA 1 cut(s) 2910
Mph1103I ATGCAT 1 cut(s) 1590
MroI TCCGGA 2 cut(s) 2863, 3919
MroXI GAANNNNTTC 2 cut(s) 1569, 3573
MscI TGGCCA 1 cut(s) 2910
MslI CAYNNNNRTG 6 cut(s) 65, 834, 1536, 1860, 2685, 4924
Msp20I TGGCCA 1 cut(s) 2910
MspA1I CMGCKG 5 cut(s) 217, 1069, 2804, 3559, 4118
MspI CCGG 7 cut(s) 1650, 2304, 2331, 2387, 2864, 3920, 5005
MspR9I CCNGG 7 cut(s) 438, 576, 714, 1125, 3495, 4110, 5006
MunI CAATTG 4 cut(s) 1721, 1808, 4774, 4954
Mva1269I GAATGC 2 cut(s) 1636, 4058
MvaI CCWGG 6 cut(s) 438, 576, 714, 1125, 3495, 4110
MvnI CGCG 2 cut(s) 3056, 4247
NciI CCSGG 1 cut(s) 5006
NcoI CCATGG 1 cut(s) 4984
NdeI CATATG 1 cut(s) 3869
NsiI ATGCAT 1 cut(s) 1590
NspI RCATGY 8 cut(s) 22, 667, 904, 1274, 1843, 1859, 3673, 4698
PaeI GCATGC 1 cut(s) 904
PaeR7I CTCGAG 1 cut(s) 5064
PaqCI CACCTGC 1 cut(s) 31
PciI ACATGT 4 cut(s) 18, 663, 1270, 1839
PciSI GCTCTTC 1 cut(s) 5152
PcsI WCGNNNNNNNCGW 1 cut(s) 2107
PctI GAATGC 2 cut(s) 1636, 4058
PdmI GAANNNNTTC 2 cut(s) 1569, 3573
PflMI CCANNNNNTGG 2 cut(s) 1723, 2791
PleI GAGTC 4 cut(s) 345, 1741, 1830, 2640
PpsI GAGTC 4 cut(s) 345, 1741, 1830, 2640
PpuMI RGGWCCY 1 cut(s) 1928
PscI ACATGT 4 cut(s) 18, 663, 1270, 1839
PsiI TTATAA 1 cut(s) 1229
Psp124BI GAGCTC 1 cut(s) 1771
Psp1406I AACGTT 1 cut(s) 329
Psp5II RGGWCCY 1 cut(s) 1928
Psp6I CCWGG 6 cut(s) 436, 574, 712, 1123, 3493, 4108
PspFI CCCAGC 2 cut(s) 228, 2784
PspGI CCWGG 6 cut(s) 436, 574, 712, 1123, 3493, 4108
PspPPI RGGWCCY 1 cut(s) 1928
PspXI VCTCGAGB 1 cut(s) 5064
PstI CTGCAG 4 cut(s) 2491, 4075, 5105, 5136
PstNI CAGNNNCTG 1 cut(s) 2087
PsuI RGATCY 8 cut(s) 154, 195, 593, 1751, 2000, 2327, 4123, 4255
PvuII CAGCTG 2 cut(s) 2804, 4118
RsaI GTAC 8 cut(s) 421, 517, 652, 1269, 1785, 2080, 4512, 4949
RsaNI GTAC 8 cut(s) 420, 516, 651, 1268, 1784, 2079, 4511, 4948
RseI CAYNNNNRTG 6 cut(s) 65, 834, 1536, 1860, 2685, 4924
SacI GAGCTC 1 cut(s) 1771
SapI GCTCTTC 1 cut(s) 5152
ScaI AGTACT 2 cut(s) 517, 1785
SchI GAGTC 4 cut(s) 346, 1742, 1831, 2641
ScrFI CCNGG 7 cut(s) 438, 576, 714, 1125, 3495, 4110, 5006
SduI GDGCHC 6 cut(s) 48, 937, 1258, 1771, 4340, 4917
SfaNI GCATC 9 cut(s) 57, 478, 1462, 1575, 1810, 4128, 4837, 4928, 5018
SfcI CTRYAG 8 cut(s) 534, 1560, 2487, 3135, 3594, 4071, 5101, 5132
Sfr274I CTCGAG 1 cut(s) 5064
SinI GGWCC 5 cut(s) 1528, 1928, 3214, 4377, 4648
SlaI CTCGAG 1 cut(s) 5064
SmiMI CAYNNNNRTG 6 cut(s) 65, 834, 1536, 1860, 2685, 4924
SmlI CTYRAG 3 cut(s) 2744, 4544, 5064
SmoI CTYRAG 3 cut(s) 2744, 4544, 5064
SphI GCATGC 1 cut(s) 904
SspI AATATT 2 cut(s) 1707, 3836
SspMI CTAG 7 cut(s) 519, 693, 1956, 1998, 2364, 4077, 4866
SstI GAGCTC 1 cut(s) 1771
StyD4I CCNGG 7 cut(s) 436, 574, 712, 1123, 3493, 4108, 5004
StyI CCWWGG 2 cut(s) 3990, 4984
TaiI ACGT 3 cut(s) 178, 332, 1426
TaqI TCGA 8 cut(s) 1241, 1573, 1985, 2017, 2101, 2290, 4713, 5065
TatI WGTACW 4 cut(s) 515, 1267, 1783, 2078
TauI GCSGC 2 cut(s) 220, 1072
TscAI CASTG 7 cut(s) 889, 981, 1516, 1910, 2906, 4075, 4349
TspGWI ACGGA 1 cut(s) 1862
TspRI CASTG 7 cut(s) 889, 981, 1516, 1910, 2906, 4075, 4349
Van91I CCANNNNNTGG 2 cut(s) 1723, 2791
VneI GTGCAC 2 cut(s) 1254, 4913
VpaK11BI GGWCC 5 cut(s) 1528, 1928, 3214, 4377, 4648
XbaI TCTAGA 2 cut(s) 1955, 1997
XceI RCATGY 8 cut(s) 22, 667, 904, 1274, 1843, 1859, 3673, 4698
XcmI CCANNNNNNNNNTGG 1 cut(s) 881
XhoI CTCGAG 1 cut(s) 5064
XmiI GTMKAC 2 cut(s) 853, 4351
XmnI GAANNNNTTC 2 cut(s) 1569, 3573
XspI CTAG 7 cut(s) 519, 693, 1956, 1998, 2364, 4077, 4866
ZrmI AGTACT 2 cut(s) 517, 1785
Zsp2I ATGCAT 1 cut(s) 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.