AT1G17220

Translation initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011012
Physical Location & Seq
Forward (+)
5885007 .. 5890500
5494 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G17220.1

Sequence Viewer

Length: 3081 bp
ATGCCATCGATGCTTGTTCTCGTCGGCACAATGCCGTCCTTGGCTTCTCTGGTTAGTCTAGGTGGTGCTTGTGCAAGCGTTTCTGGAACGAGTTCTTCGGATGCATCGTATGCTTTAGTTAAGAGGGTTTCTTTGTCAAGGAGAAGTGTTAAGGGGACTAAGAAATGGCTGTGTAGATATTCTGTTTCGTCTTCAACTACTACTACTACTGCTGACTTCATTGCTGACCAAAACAACAACTCAGTTTCTATAGATTCTAACTCGTTTAGGGGGAGTAAAGATGGGGATGATAGTGAGGTTGTGCTGAAGCAGACTCCTAAACCTGTCTTGAAACCCCCTGTGGCAAGGGTAGAAAGAGGTTTGGGGGTGAATACTGCTCCTTGGAGTAAAGATTTGTCGAATGGGGGTAAGTTTGATGGAGAAGAAGAGAGGAATAAGGTTATTGAATCTCTTGGTGAAGTTTTAGATAAAGCTGAGAAGTTGGAAATTCCGAAACCGGGTAACAAAGAGGGTGGTGAGGCTGTTAAGCCGTCACAGCCTAGTGCCAACAGTAGTAACTCAAGAAATGGTAGCTATGCGAATGCGAGTGATGGAGGAACAAGGAAGACGAAAACCATGAAGAGTGTGTGGCGTAAGGGCGATGCTGTTGCTGCTGTGCAAAAAGTTGTTAAGGAATCACCTAAAATTTTTAATAGAGGAGTGCAGACCGAACCTAGAACGAGAGAAGAGGGAGAGGTGAATGCCAAAGCAGGCACTCCATTGGCACCACCTCAGCCACCTTTTAGACCTCAACCGCCTGTAAGACCCCAGCCAATGTTACAAGGGAAGCCTATGGTAGCTCCACCCGTAAAGAAATCACCCATCTTAAAAGATCTTGGTATGGCAGCAAAACCTTTAGTTTCTGAAGAAGTTGATTCTAGCGTTAAAAGTAAAGAAAGGAAGCCTATTTTGGTTGACAAATTTGCTTCGAAGAAAAAAGGTGTTGATCCTGCGGCCTCTCAGGCTGTGTTAGCTCCTACTAAGCCTGGAAAGGGTCCTCCCTCTAACAAGTTCAGAGTTGAGCACCGTAATAAAAAAAATGCATCAGCTAGTCCAAGACGAAGAATTGTTGCTGAAGACGACGGCGACGATGATGCATCCATTTCTCGATCAGGTAGAAAAGGGAGAAAATGGAGTAAAGCTAGTAGGAAGGCTGTAAGACTCCAGGCTGCAAAAGACGCAGCACCTGTCAAAGCTGAAATCTTAGAGGTAGAGGAAGAAGGCATGTCCATCGAGGATTTGGCTTACAACCTAGCCATCGGAGAAGGTGACATCCTTGGGTACCTATATTCAAAAGGGATTAGACCTGATGGTGTGCACACTTTGGACCGCGAGATGGTGAAGATGATTTGTAGAGATTACGATGTTGAGGTCCTTGATGCTGATTCAGTTAAAGTAGAAGAGATGGCAAAGAAAAGGCAAACTTTTGATGAAGAAGATTTGGACAAGTTAGAGGACAGACCTCCTGTCATAACGATAATGGGTCATGTGGACCATGGAAAGACCACTCTTCTCGACTATATCAGAAAAAGCAAGGTTGCTGCGTCAGAAGCAGGAGGAATTACACAAGGAATTGGTGCATATAAGGTGTCAGTGCCTGTTGATGGAAAGTTGCAGTCCTGCGTTTTCCTTGATACTCCTGGACATGAGGCATTTGGTGCAATGAGAGCTCGCGGAGCACGAGTCACTGACATTGCAATCATTGTGGTTGCTGCTGATGATGGAATTCGTCCTCAAACAAATGAAGCAATAGCTCACGCAAAGGCTGCTGCTGTACCAATAGTTATAGCTATAAATAAGATAGATAAAGAAGGAGCTAGTCCAGATAGAGTGATGCAAGAGCTTTCTTCAATTGGTTTGATGCCTGAAGATTGGGGTGGTGATGTTCCAATGGTTCAGATCAGTGCTTTGAAAGGGGAAAATGTCGATGATCTGTTGGAAACTGTCATGCTTGTTGCAGAGCTTCAAGAGTTGAAAGCAAATCCACACAGAAATGCCAAGGGCATTGTAATCGAGGCTGGACTTGATAAAGCAAAAGGACCATTTGCGACGTTCATTGTTCAGAAGGGGACTTTGAAAAGAGGGGATGTTGTTGTTTGCGGAGAAGCTTTCGGAAAGGTACGAGCTTTATTTGATCACAGTGGGGAACGAGTTGATGAAGCTGGACCCTCCATACCTGTACAGGTGATTGGTTTAAATAATGTCCCCATTGCTGGTGATGAATTTGAGATCGTCTCTTCCCTTGATGTGGCGCGGGAGATGGCAGAGGCACGTGCGGTATCACTACGAGATGAAAGAATATCTGCAAAGGCTGGGGATGGAAAGGTCACGCTTTCCTCCTTAGCTTCTGCTGTATCAGCGAAAAAGATGTCAGGCTTAGATTTGCATCAGCTTAATATCATCTTGAAGGTCGATGTACAGGGATCCATTGAAGCTGTAAGACAAGCCCTTCAAGTCCTCCCTCAGGAGAATGTCACCTTGAAATTCTTGCTACAAGCAACAGGGGATGTGAGCAACAGTGATGTTGATCTAGCATCAGCGAGTGAAGCTATCGTTTTTGGATTTAATGTCAAAGCGTCTGGTTCTGTTAAGAAAGCTGCAGAAAACAAAGGTGTTGAAATCCGACTATATAGAGTTATATATGAGCTTATTGACGATGTGCGAAACGCAATGGAAGGACTTCTTGAGTCTGTTGAGGAACAAATCCCAATTGGCTCAGCAGAAGTTCGAGCTACTTTCAGCAGTGGAAGTGGTCGTGTGGCTGGATGCATGGTGAATGAAGGAAAATTTGTCAAAGATTGTGGCATCAGGGTGGTCCGGAAGGGTAAAACTGTCCATGTCGGTGTTCTTGATTCTCTTAAACGGGTTAAAGAAAACGTGAAAGAGGTGAGTGCTGGATTAGAATGTGGTATTGGTATGGATGACTACGATGATTGGATAGAAGGAGACATCATCGAGGCCTTTAACGCAGTTCAAAAGAGGCGAACGCTAGAAGAAGCATCAGCTTCAATGTCTGCTGCGATTGAAGAGGCTGGAGTTTAA

Protein Analysis

1026

Amino Acids

109.75

Weight (kDa)

7.15

Isoelectric Point (pI)

41.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IF2_N PF04760 420 - 470 2.6e-07 Translation initiation factor IF-2, N-terminal region
GTP_EFTU PF00009 504 - 664 1e-33 Elongation factor Tu GTP binding domain
MMR_HSR1 PF01926 504 - 613 6.3e-09 50S ribosome-binding GTPase
Ras PF00071 505 - 663 2.8e-06 Ras family
EF-G_D2 PF22042 679 - 756 2.6e-26 Elongation factor G domain 2
IF-2 PF11987 801 - 901 9.7e-33 Translation-initiation factor 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1320
AccB1I GGYRCC 2 cut(s) 763, 1320
AccII CGCG 3 cut(s) 1371, 1713, 2293
AccIII TCCGGA 1 cut(s) 2856
AciI CCGC 7 cut(s) 794, 992, 1369, 1713, 2139, 2293, 2315
AclWI GGATC 3 cut(s) 980, 2457, 2470
AcsI RAATTY 7 cut(s) 486, 684, 959, 1764, 2261, 2522, 2825
AcuI CTGAAG 4 cut(s) 326, 924, 1134, 1926
AcvI CACGTG 1 cut(s) 2312
AfaI GTAC 5 cut(s) 1322, 1815, 2160, 2220, 2457
AfiI CCNNNNNNNGG 7 cut(s) 497, 1031, 1375, 1643, 2252, 2287, 2503
AhdI GACNNNNNGTC 1 cut(s) 1505
AjnI CCWGG 3 cut(s) 1024, 1203, 1678
AjuI GAANNNNNNNTTGG 4 cut(s) 932, 964, 2934, 2966
Alw21I GWGCWC 4 cut(s) 1065, 1359, 1711, 1720
Alw26I GTCTC 2 cut(s) 2278, 2979
Alw44I GTGCAC 1 cut(s) 1355
AlwI GGATC 3 cut(s) 980, 2457, 2470
AlwNI CAGNNNCTG 2 cut(s) 1226, 1637
Aor13HI TCCGGA 1 cut(s) 2856
AoxI GGCC 2 cut(s) 993, 2997
ApaLI GTGCAC 1 cut(s) 1355
ApoI RAATTY 7 cut(s) 486, 684, 959, 1764, 2261, 2522, 2825
ArsI GACNNNNNNTTYG 2 cut(s) 2393, 2425
Asp700I GAANNNNTTC 2 cut(s) 91, 2718
Asp718I GGTACC 1 cut(s) 1320
AspLEI GCGC 1 cut(s) 2293
AspS9I GGNCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
AsuC2I CCSGG 1 cut(s) 498
AsuII TTCGAA 1 cut(s) 968
AvaII GGWCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
AxyI CCTNAGG 1 cut(s) 2502
BaeGI GKGCMC 1 cut(s) 1359
BamHI GGATCC 1 cut(s) 2462
BanI GGYRCC 2 cut(s) 763, 1320
BanII GRGCYC 1 cut(s) 1711
BauI CACGAG 1 cut(s) 1719
BbrPI CACGTG 1 cut(s) 2312
BbsI GAAGAC 3 cut(s) 183, 611, 1122
Bbv12I GWGCWC 4 cut(s) 1065, 1359, 1711, 1720
BbvCI CCTCAGC 1 cut(s) 771
BceAI ACGGC 3 cut(s) 19, 514, 1138
BcgI CGANNNNNNTGC 8 cut(s) 629, 663, 1115, 1149, 1252, 1286, 2032, 2066
BciT130I CCWGG 3 cut(s) 1026, 1205, 1680
BclI TGATCA 1 cut(s) 2173
BcnI CCSGG 1 cut(s) 498
BcoDI GTCTC 2 cut(s) 2278, 2979
BfmI CTRYAG 2 cut(s) 249, 2637
BglI GCCNNNNNGGC 1 cut(s) 1001
BglII AGATCT 1 cut(s) 871
BlpI GCTNAGC 1 cut(s) 2755
Bme1390I CCNGG 4 cut(s) 498, 1026, 1205, 1680
Bme18I GGWCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
BmeRI GACNNNNNGTC 1 cut(s) 1505
BmgT120I GGNCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
BmiI GGNNCC 5 cut(s) 765, 1035, 1322, 2206, 2464
BmrFI CCNGG 4 cut(s) 498, 1026, 1205, 1680
BpiI GAAGAC 3 cut(s) 183, 611, 1122
BplI GAGNNNNNCTC 2 cut(s) 2258, 2290
BpmI CTGGAG 1 cut(s) 1187
Bpu10I CCTNAGC 2 cut(s) 771, 2380
Bpu1102I GCTNAGC 1 cut(s) 2755
Bpu14I TTCGAA 1 cut(s) 968
BpuEI CTTGAG 2 cut(s) 544, 2744
BpuMI CCSGG 1 cut(s) 498
Bsa29I ATCGAT 1 cut(s) 8
BsaAI YACGTR 1 cut(s) 2312
BsaBI GATNNNNATC 2 cut(s) 2424, 2565
BsaJI CCNNGG 5 cut(s) 39, 380, 1315, 1534, 2037
BsaWI WCCGGW 1 cut(s) 2856
BsaXI ACNNNNNCTCC 2 cut(s) 1707, 1737
Bsc4I CCNNNNNNNGG 7 cut(s) 497, 1031, 1375, 1643, 2252, 2287, 2503
Bse21I CCTNAGG 1 cut(s) 2502
Bse3DI GCAATG 5 cut(s) 219, 1707, 1731, 2247, 2715
Bse8I GATNNNNATC 2 cut(s) 2424, 2565
BseAI TCCGGA 1 cut(s) 2856
BseBI CCWGG 3 cut(s) 1026, 1205, 1680
BseCI ATCGAT 1 cut(s) 8
BseDI CCNNGG 5 cut(s) 39, 380, 1315, 1534, 2037
BseGI GGATG 9 cut(s) 106, 292, 1136, 1311, 2131, 2362, 2551, 2810, 2965
BseJI GATNNNNATC 2 cut(s) 2424, 2565
BseLI CCNNNNNNNGG 7 cut(s) 497, 1031, 1375, 1643, 2252, 2287, 2503
BseMI GCAATG 5 cut(s) 219, 1707, 1731, 2247, 2715
BseMII CTCAG 6 cut(s) 255, 465, 785, 1013, 2516, 2769
BseRI GAGGAG 1 cut(s) 711
BseSI GKGCMC 1 cut(s) 1359
BseYI CCCAGC 2 cut(s) 807, 2351
BsgI GTGCAG 1 cut(s) 722
Bsh1236I CGCG 3 cut(s) 1371, 1713, 2293
BshFI GGCC 2 cut(s) 995, 2999
BshNI GGYRCC 2 cut(s) 763, 1320
BshVI ATCGAT 1 cut(s) 8
BsiHKAI GWGCWC 4 cut(s) 1065, 1359, 1711, 1720
BsiSI CCGG 2 cut(s) 497, 2857
BslFI GGGAC 3 cut(s) 169, 2122, 2228
BslI CCNNNNNNNGG 7 cut(s) 497, 1031, 1375, 1643, 2252, 2287, 2503
BsmAI GTCTC 2 cut(s) 2278, 2979
BsmBI CGTCTC 1 cut(s) 2278
BsmFI GGGAC 3 cut(s) 169, 2122, 2228
BsmI GAATGC 2 cut(s) 586, 745
BsnI GGCC 2 cut(s) 995, 2999
Bsp119I TTCGAA 1 cut(s) 968
Bsp1286I GDGCHC 4 cut(s) 1065, 1359, 1711, 1720
Bsp13I TCCGGA 1 cut(s) 2856
Bsp1407I TGTACA 2 cut(s) 2218, 2455
Bsp143I GATC 9 cut(s) 871, 985, 1148, 1938, 1969, 2173, 2268, 2462, 2566
Bsp1720I GCTNAGC 1 cut(s) 2755
Bsp19I CCATGG 1 cut(s) 1534
BspACI CCGC 7 cut(s) 794, 992, 1369, 1713, 2139, 2293, 2315
BspANI GGCC 2 cut(s) 995, 2999
BspCNI CTCAG 6 cut(s) 254, 466, 784, 1012, 2515, 2768
BspDI ATCGAT 1 cut(s) 8
BspEI TCCGGA 1 cut(s) 2856
BspFNI CGCG 3 cut(s) 1371, 1713, 2293
BspLI GGNNCC 5 cut(s) 765, 1035, 1322, 2206, 2464
BspMAI CTGCAG 1 cut(s) 2641
BspPI GGATC 3 cut(s) 980, 2457, 2470
BspT104I TTCGAA 1 cut(s) 968
BspT107I GGYRCC 2 cut(s) 763, 1320
BsrDI GCAATG 5 cut(s) 219, 1707, 1731, 2247, 2715
BsrGI TGTACA 2 cut(s) 2218, 2455
BssECI CCNNGG 5 cut(s) 39, 380, 1315, 1534, 2037
BssMI GATC 9 cut(s) 871, 985, 1148, 1938, 1969, 2173, 2268, 2462, 2566
BssSI CACGAG 1 cut(s) 1719
BssT1I CCWWGG 5 cut(s) 39, 380, 1315, 1534, 2037
Bst2BI CACGAG 1 cut(s) 1719
Bst2UI CCWGG 3 cut(s) 1026, 1205, 1680
Bst4CI ACNGT 6 cut(s) 551, 1067, 1984, 2180, 2558, 2872
Bst6I CTCTTC 7 cut(s) 420, 614, 720, 1434, 1554, 2281, 3060
BstAPI GCANNNNNTGC 3 cut(s) 110, 1697, 1805
BstAUI TGTACA 2 cut(s) 2218, 2455
BstBAI YACGTR 1 cut(s) 2312
BstBI TTCGAA 1 cut(s) 968
BstC8I GCNNGC 3 cut(s) 76, 751, 1711
BstDSI CCRYGG 1 cut(s) 1534
BstENI CCTNNNNNAGG 1 cut(s) 2501
BstF5I GGATG 9 cut(s) 106, 292, 1136, 1311, 2131, 2362, 2551, 2810, 2965
BstFNI CGCG 3 cut(s) 1371, 1713, 2293
BstHHI GCGC 1 cut(s) 2293
BstKTI GATC 9 cut(s) 874, 988, 1151, 1941, 1972, 2176, 2271, 2465, 2569
BstMAI GTCTC 2 cut(s) 2278, 2979
BstMBI GATC 9 cut(s) 871, 985, 1148, 1938, 1969, 2173, 2268, 2462, 2566
BstNI CCWGG 3 cut(s) 1026, 1205, 1680
BstNSI RCATGY 1 cut(s) 1267
BstSCI CCNGG 4 cut(s) 496, 1024, 1203, 1678
BstSFI CTRYAG 2 cut(s) 249, 2637
BstSLI GKGCMC 1 cut(s) 1359
BstUI CGCG 3 cut(s) 1371, 1713, 2293
BstV2I GAAGAC 3 cut(s) 183, 611, 1122
BstX2I RGATCY 2 cut(s) 871, 2462
BstYI RGATCY 2 cut(s) 871, 2462
Bsu15I ATCGAT 1 cut(s) 8
Bsu36I CCTNAGG 1 cut(s) 2502
BsuRI GGCC 2 cut(s) 995, 2999
BsuTUI ATCGAT 1 cut(s) 8
BtgI CCRYGG 1 cut(s) 1534
BtgZI GCGATG 1 cut(s) 654
BtsCI GGATG 9 cut(s) 106, 292, 1136, 1311, 2131, 2362, 2551, 2810, 2965
BtsI GCAGTG 1 cut(s) 2788
BtsIMutI CAGTG 6 cut(s) 1638, 1725, 1948, 2185, 2563, 2788
Cac8I GCNNGC 3 cut(s) 76, 751, 1711
CaiI CAGNNNCTG 2 cut(s) 1226, 1637
CfoI GCGC 1 cut(s) 2293
Cfr13I GGNCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
ClaI ATCGAT 1 cut(s) 8
CseI GACGC 3 cut(s) 1226, 1572, 2604
Csp6I GTAC 5 cut(s) 1321, 1814, 2159, 2219, 2456
CspCI CAANNNNNGTGG 6 cut(s) 493, 528, 1725, 1760, 2821, 2856
CviAII CATG 8 cut(s) 616, 1264, 1526, 1535, 1685, 1987, 2809, 2876
CviQI GTAC 5 cut(s) 1321, 1814, 2159, 2219, 2456
DpnI GATC 9 cut(s) 873, 987, 1150, 1940, 1971, 2175, 2270, 2464, 2568
DpnII GATC 9 cut(s) 871, 985, 1148, 1938, 1969, 2173, 2268, 2462, 2566
DraI TTTAAA 1 cut(s) 2235
DriI GACNNNNNGTC 1 cut(s) 1505
Eam1104I CTCTTC 7 cut(s) 420, 614, 720, 1434, 1554, 2281, 3060
Eam1105I GACNNNNNGTC 1 cut(s) 1505
EarI CTCTTC 7 cut(s) 420, 614, 720, 1434, 1554, 2281, 3060
Ecl136II GAGCTC 1 cut(s) 1709
Eco130I CCWWGG 5 cut(s) 39, 380, 1315, 1534, 2037
Eco147I AGGCCT 1 cut(s) 2999
Eco24I GRGCYC 1 cut(s) 1711
Eco47I GGWCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
Eco53kI GAGCTC 1 cut(s) 1709
Eco57I CTGAAG 4 cut(s) 326, 924, 1134, 1926
Eco72I CACGTG 1 cut(s) 2312
Eco81I CCTNAGG 1 cut(s) 2502
EcoICRI GAGCTC 1 cut(s) 1709
EcoNI CCTNNNNNAGG 1 cut(s) 2501
EcoO109I RGGNCCY 2 cut(s) 1034, 1411
EcoRI GAATTC 1 cut(s) 1764
EcoRII CCWGG 3 cut(s) 1024, 1203, 1678
EcoT14I CCWWGG 5 cut(s) 39, 380, 1315, 1534, 2037
EcoT22I ATGCAT 4 cut(s) 106, 1084, 1138, 2810
EcoT38I GRGCYC 1 cut(s) 1711
ErhI CCWWGG 5 cut(s) 39, 380, 1315, 1534, 2037
Esp3I CGTCTC 1 cut(s) 2278
FaeI CATG 8 cut(s) 619, 1267, 1529, 1538, 1688, 1990, 2812, 2879
FalI AAGNNNNNCTT 4 cut(s) 1447, 1479, 2706, 2738
FaqI GGGAC 3 cut(s) 169, 2122, 2228
FatI CATG 8 cut(s) 615, 1263, 1525, 1534, 1684, 1986, 2808, 2875
FauI CCCGC 1 cut(s) 2286
FbaI TGATCA 1 cut(s) 2173
FokI GGATG 9 cut(s) 113, 299, 1123, 1298, 2138, 2369, 2558, 2817, 2972
FriOI GRGCYC 1 cut(s) 1711
GlaI GCGC 1 cut(s) 2292
GsaI CCCAGC 2 cut(s) 811, 2355
GsuI CTGGAG 1 cut(s) 1187
HaeIII GGCC 2 cut(s) 995, 2999
HapII CCGG 2 cut(s) 497, 2857
HgaI GACGC 3 cut(s) 1226, 1572, 2604
HhaI GCGC 1 cut(s) 2293
Hin1II CATG 8 cut(s) 619, 1267, 1529, 1538, 1688, 1990, 2812, 2879
Hin6I GCGC 1 cut(s) 2291
HinP1I GCGC 1 cut(s) 2291
HincII GTYRAC 1 cut(s) 955
HindII GTYRAC 1 cut(s) 955
HindIII AAGCTT 1 cut(s) 2145
HpaII CCGG 2 cut(s) 497, 2857
Hpy166II GTNNAC 3 cut(s) 955, 1357, 1531
Hpy8I GTNNAC 3 cut(s) 955, 1357, 1531
Hpy99I CGWCG 4 cut(s) 26, 1124, 1130, 2092
HpyCH4III ACNGT 6 cut(s) 551, 1067, 1984, 2180, 2558, 2872
HpyCH4IV ACGT 3 cut(s) 2090, 2311, 2916
HpySE526I ACGT 3 cut(s) 2090, 2311, 2916
Hsp92II CATG 8 cut(s) 619, 1267, 1529, 1538, 1688, 1990, 2812, 2879
HspAI GCGC 1 cut(s) 2291
Kpn2I TCCGGA 1 cut(s) 2856
KpnI GGTACC 1 cut(s) 1324
Ksp22I TGATCA 1 cut(s) 2173
Kzo9I GATC 9 cut(s) 871, 985, 1148, 1938, 1969, 2173, 2268, 2462, 2566
LmnI GCTCC 5 cut(s) 382, 844, 1018, 1715, 1853
MaeII ACGT 3 cut(s) 2090, 2311, 2916
MaeIII GTNAC 8 cut(s) 500, 531, 554, 816, 1307, 1723, 2365, 2512
MalI GATC 9 cut(s) 873, 987, 1150, 1940, 1971, 2175, 2270, 2464, 2568
MboI GATC 9 cut(s) 871, 985, 1148, 1938, 1969, 2173, 2268, 2462, 2566
MfeI CAATTG 2 cut(s) 1890, 2748
MflI RGATCY 2 cut(s) 871, 2462
MhlI GDGCHC 4 cut(s) 1065, 1359, 1711, 1720
MlyI GAGTC 4 cut(s) 307, 1194, 1731, 2735
MmeI TCCRAC 3 cut(s) 462, 1956, 2686
Mph1103I ATGCAT 4 cut(s) 106, 1084, 1138, 2810
MroI TCCGGA 1 cut(s) 2856
MroXI GAANNNNTTC 2 cut(s) 91, 2718
MslI CAYNNNNRTG 3 cut(s) 2031, 2849, 2880
MspI CCGG 2 cut(s) 497, 2857
MspR9I CCNGG 4 cut(s) 498, 1026, 1205, 1680
MunI CAATTG 2 cut(s) 1890, 2748
Mva1269I GAATGC 2 cut(s) 586, 745
MvaI CCWGG 3 cut(s) 1026, 1205, 1680
MvnI CGCG 3 cut(s) 1371, 1713, 2293
NciI CCSGG 1 cut(s) 498
NcoI CCATGG 1 cut(s) 1534
NdeII GATC 9 cut(s) 871, 985, 1148, 1938, 1969, 2173, 2268, 2462, 2566
NlaIII CATG 8 cut(s) 619, 1267, 1529, 1538, 1688, 1990, 2812, 2879
NlaIV GGNNCC 5 cut(s) 765, 1035, 1322, 2206, 2464
NmuCI GTSAC 5 cut(s) 531, 1307, 1723, 2365, 2512
NsiI ATGCAT 4 cut(s) 106, 1084, 1138, 2810
NspI RCATGY 1 cut(s) 1267
NspV TTCGAA 1 cut(s) 968
PceI AGGCCT 1 cut(s) 2999
PcsI WCGNNNNNNNCGW 3 cut(s) 104, 1125, 1717
PctI GAATGC 2 cut(s) 586, 745
PdmI GAANNNNTTC 2 cut(s) 91, 2718
PfeI GAWTC 6 cut(s) 254, 446, 674, 914, 1424, 2891
PfoI TCCNGGA 1 cut(s) 1678
PleI GAGTC 4 cut(s) 307, 1194, 1730, 2734
PmaCI CACGTG 1 cut(s) 2312
PmlI CACGTG 1 cut(s) 2312
PpsI GAGTC 4 cut(s) 307, 1194, 1730, 2734
Ppu21I YACGTR 1 cut(s) 2312
PpuMI RGGWCCY 2 cut(s) 1034, 1411
Psp124BI GAGCTC 1 cut(s) 1711
Psp5II RGGWCCY 2 cut(s) 1034, 1411
Psp6I CCWGG 3 cut(s) 1024, 1203, 1678
PspCI CACGTG 1 cut(s) 2312
PspFI CCCAGC 2 cut(s) 807, 2351
PspGI CCWGG 3 cut(s) 1024, 1203, 1678
PspN4I GGNNCC 5 cut(s) 765, 1035, 1322, 2206, 2464
PspPI GGNCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
PspPPI RGGWCCY 2 cut(s) 1034, 1411
PstI CTGCAG 1 cut(s) 2641
PstNI CAGNNNCTG 2 cut(s) 1226, 1637
PsuI RGATCY 2 cut(s) 871, 2462
RsaI GTAC 5 cut(s) 1322, 1815, 2160, 2220, 2457
RsaNI GTAC 5 cut(s) 1321, 1814, 2159, 2219, 2456
RseI CAYNNNNRTG 3 cut(s) 2031, 2849, 2880
SacI GAGCTC 1 cut(s) 1711
Sau3AI GATC 9 cut(s) 871, 985, 1148, 1938, 1969, 2173, 2268, 2462, 2566
Sau96I GGNCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
SchI GAGTC 4 cut(s) 307, 1194, 1731, 2735
ScrFI CCNGG 4 cut(s) 498, 1026, 1205, 1680
SduI GDGCHC 4 cut(s) 1065, 1359, 1711, 1720
SfcI CTRYAG 2 cut(s) 249, 2637
SfuI TTCGAA 1 cut(s) 968
SinI GGWCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
SmiMI CAYNNNNRTG 3 cut(s) 2031, 2849, 2880
SmlI CTYRAG 2 cut(s) 559, 2723
SmoI CTYRAG 2 cut(s) 559, 2723
SseBI AGGCCT 1 cut(s) 2999
SsiI CCGC 7 cut(s) 794, 992, 1369, 1713, 2139, 2293, 2315
SstI GAGCTC 1 cut(s) 1711
StuI AGGCCT 1 cut(s) 2999
StyD4I CCNGG 4 cut(s) 496, 1024, 1203, 1678
StyI CCWWGG 5 cut(s) 39, 380, 1315, 1534, 2037
TaaI ACNGT 6 cut(s) 551, 1067, 1984, 2180, 2558, 2872
TaiI ACGT 3 cut(s) 2093, 2314, 2919
TaqII GACCGA 1 cut(s) 722
TatI WGTACW 2 cut(s) 2218, 2455
TauI GCSGC 1 cut(s) 995
TfiI GAWTC 6 cut(s) 254, 446, 674, 914, 1424, 2891
TscAI CASTG 6 cut(s) 1638, 1732, 1948, 2185, 2563, 2788
TseFI GTSAC 5 cut(s) 531, 1307, 1723, 2365, 2512
Tsp45I GTSAC 5 cut(s) 531, 1307, 1723, 2365, 2512
TspDTI ATGAA 9 cut(s) 208, 632, 1485, 1797, 2083, 2211, 2274, 2346, 2832
TspRI CASTG 6 cut(s) 1638, 1732, 1948, 2185, 2563, 2788
VneI GTGCAC 1 cut(s) 1355
VpaK11BI GGWCC 7 cut(s) 1034, 1366, 1411, 1531, 2078, 2204, 2854
XagI CCTNNNNNAGG 1 cut(s) 2501
XapI RAATTY 7 cut(s) 486, 684, 959, 1764, 2261, 2522, 2825
XceI RCATGY 1 cut(s) 1267
XcmI CCANNNNNNNNNTGG 1 cut(s) 1276
XmnI GAANNNNTTC 2 cut(s) 91, 2718
Zsp2I ATGCAT 4 cut(s) 106, 1084, 1138, 2810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.