AT1G18560

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0009501
Physical Location & Seq
Forward (+)
6385186 .. 6388180
2995 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G18560.1

Sequence Viewer

Length: 2073 bp
ATGGAGTGGAATGTAAATAATGCATTCAAAACCTACAAAGAAATGGAACCTAAAGCCATGATGGACATGACACTAGTTCCACATTCTGATCCCATTGACATTGGATTAGGCTCTTCTGATAAGTCAAATTCGGTTCCCCCTAAACGGAAGAAGACAATGACATCAGTTTATCTTAAATATTTCGAGACTGCACCAGACAGCAAAACTCGGAAATGCAAGTTCTGTGGACAAAGCTATTCCATTGCAACAGCTACTGGAAATCTTGGAAGGCATCTGACTAATCGACATCCAGGCTATGATAAGGCAGCAGCAGATGTTGTCACCAGCTCATCAGTACCACAGACACCACCGGCTGTTGTTAAACCGTCACAATCCCAGTCGAAAGTACCACAACTCGATTATGATCATCTTAACTGGTTAGTTCTCAAGTGGCTTGCTTTGTCATCACTTCCTCCCTCTACTGTAGACGAAACATGGTTGGGAAACTCCTTCAAATTTCTTAAGCCATCCATCCAGTTATGGCCGGCTGAAAAATATAAAGCCATACTTGATGAGGTTTTCACAAGTATGCGGGGAGATGTGAAGACAACCTTGGAGCATATCCAGTCCAAAGTTTCTGTCACTTTAAGTTTCTGGAATTCATATGAAAACATTTTTTATATGAGCGTAACGGGTCAATGGATAGATGAAAATTGGTCGTCTCATAGGTTGCTGCTCGACATATGTCGGATTCCTTATCCCTCTGGGGGTTCTGAGATTTATAACTCCCTTTTGAAAGTCCTTAAGACATATGCCATTGAAGACAGGATTCTATGTTGTACACATGACAACAGCGAAAACGCTATTCACGCTTGTCATAGCCTGAAGGAGTACTTTGATGGTCAAAAGGTCTTACCTTTCTGCTACATTCCCTGTGCCGCTCAAACTCTGAATGATATTATTGATGAGGGGTTAGCAACTATAAAGCCCATTATCTCTAAGGTTAGAGAATTCACACAAGAGTTAAACGCGTCCACAGAGCTATCTGATGATTTCATTCAGTTGACAACAGCTTATCAAGAAGGCAACTGGAAACTACCCATCGATGCTTCATCTCGTTGGAGTGGCAATTACCAGATGGTCAACATCTTGTGCAAGGCTAGCAAGTCCTTGGACTCGGTGATTAGGAAAAACGAGGATGCTCTAGAGAACAGAATGATGTTGAGTTCTGTAGAGAAGAACGCGGTGACTATTGTCCACAATTACTTGGATTTGGATTCATTTCACAAGACCACTAACGATATGTGCACGAACAAGGATCTCACGGTTGGTCTAGCACTGCTCTTCATGGATAACATATCCGAGATGATCACAACTTGCCAGAAATCATGCCACAACCCAGACTGGCTAAGAACTTGTGCTGAGAGCATGGCCCAGAAGGCCAGAAGTTACAACACTCAAGTGTGCAACGTATTCACTTACATTACAGCCATTCTTGACCCGCGGATCAAAACAGAGTACATTCCAGAGACGATTAATCTCGAGAGCTATATAGATGAAGCAAGAAGTCATTTCATTCGTAACTATTCTTCCTCTCATTTCACATCTTCAATGACTAGCGGGTATCGTCCTCAGGAGGTAGATGAAGGAGGAGGAAATATCTCATTTGCAGAGGAAATCGCTAGAAGGAAAAGAAGAGGAAGTATGAGTAACAATGTTGTTGATGAACTGACTCAGTACTTATCAGAGTCTATAGTTCCAATGCAGACTGATGTGCTTGATTGGTGGAAGGTAAACAGTGGAAGATACCCGCGACTTTCCAACATGGCTCGGGATTTCCTTGCGGTTCAGGCGACTTCTGCTGCACCGGAAGAGATCTTTTGTGGTAAAGGAGAAGAGATTGATAAGCAGAAGTATTGCATGCCTCATGATAGCACACAATCTGTTATTTGTATCAGATCATGGATTGAAGCTGGTATGAAACTGAAGTACAAGTGTAGTGAGATTGACTATGAACGACTAATGGAGTTAGCTGCCACCGTGGCCGCTGATAATTCTGCCGGAGGTTTAGAAAAAATTCAACAACATAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4413 Dimer_Tnp_hAT zf-BED

Protein Analysis

690

Amino Acids

78.17

Weight (kDa)

5.95

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-BED PF02892 55 - 97 1.1e-06 BED zinc finger
hAT-like_RNase-H PF14372 429 - 522 1.9e-10 hAT-like transposase, RNase-H fold
Dimer_Tnp_hAT PF05699 569 - 649 1.6e-25 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 762
AccBSI CCGCTC 1 cut(s) 920
AccI GTMKAC 1 cut(s) 465
AccII CGCG 4 cut(s) 1010, 1223, 1483, 1792
AciI CCGC 9 cut(s) 571, 918, 1223, 1481, 1483, 1599, 1790, 1823, 2025
AclWI GGATC 3 cut(s) 83, 1305, 1493
AcoI YGGCCR 2 cut(s) 521, 2022
AcsI RAATTY 5 cut(s) 127, 494, 637, 989, 2055
AcuI CTGAAG 2 cut(s) 884, 1985
AfaI GTAC 7 cut(s) 336, 387, 820, 872, 1499, 1718, 1970
AfiI CCNNNNNNNGG 2 cut(s) 144, 746
AflII CTTAAG 2 cut(s) 500, 782
AflIII ACRYGT 1 cut(s) 1008
AgsI TTSAA 7 cut(s) 28, 493, 775, 800, 1590, 1949, 2060
AhlI ACTAGT 1 cut(s) 73
AjnI CCWGG 1 cut(s) 289
AjuI GAANNNNNNNTTGG 2 cut(s) 575, 607
AleI CACNNNNGTG 1 cut(s) 1439
AluBI AGCT 8 cut(s) 234, 251, 327, 1021, 1052, 1527, 1952, 2012
AluI AGCT 8 cut(s) 234, 251, 327, 1021, 1052, 1527, 1952, 2012
Alw21I GWGCWC 1 cut(s) 1289
Alw26I GTCTC 3 cut(s) 179, 705, 1502
Alw44I GTGCAC 1 cut(s) 1285
AlwI GGATC 3 cut(s) 83, 1305, 1493
AlwNI CAGNNNCTG 1 cut(s) 254
Ama87I CYCGRG 2 cut(s) 1520, 1809
AoxI GGCC 4 cut(s) 521, 1410, 1419, 2022
ApaLI GTGCAC 1 cut(s) 1285
ApeKI GCWGC 5 cut(s) 305, 308, 712, 1841, 2012
ApoI RAATTY 5 cut(s) 127, 494, 637, 989, 2055
ArsI GACNNNNNNTTYG 2 cut(s) 603, 635
AseI ATTAAT 1 cut(s) 1515
Asp700I GAANNNNTTC 1 cut(s) 2055
AspS9I GGNCC 1 cut(s) 1411
AsuHPI GGTGA 3 cut(s) 313, 1171, 1237
AsuNHI GCTAGC 1 cut(s) 1139
AvaI CYCGRG 2 cut(s) 1520, 1809
AxyI CCTNAGG 1 cut(s) 1611
BaeGI GKGCMC 1 cut(s) 1289
BarI GAAGNNNNNNTAC 2 cut(s) 1552, 1584
BbsI GAAGAC 3 cut(s) 158, 590, 807
Bbv12I GWGCWC 1 cut(s) 1289
BbvI GCAGC 5 cut(s) 317, 320, 699, 1828, 1999
BccI CCATC 6 cut(s) 55, 514, 518, 872, 1088, 1111
BciT130I CCWGG 1 cut(s) 291
BclI TGATCA 2 cut(s) 403, 1347
BcoDI GTCTC 3 cut(s) 179, 705, 1502
BcuI ACTAGT 1 cut(s) 73
BfaI CTAG 6 cut(s) 74, 1140, 1184, 1313, 1596, 1662
BfmI CTRYAG 3 cut(s) 462, 1209, 1731
BfrI CTTAAG 2 cut(s) 500, 782
BglI GCCNNNNNGGC 2 cut(s) 1418, 2021
BglII AGATCT 1 cut(s) 1854
BisI GCNGC 7 cut(s) 306, 309, 713, 918, 1842, 2013, 2025
BlsI GCNGC 7 cut(s) 307, 310, 714, 919, 1843, 2014, 2026
BmcAI AGTACT 2 cut(s) 872, 1718
Bme1390I CCNGG 1 cut(s) 291
BmeT110I CYCGRG 2 cut(s) 1520, 1809
BmgT120I GGNCC 1 cut(s) 1411
BmiI GGNNCC 2 cut(s) 48, 135
BmrFI CCNGG 1 cut(s) 291
BmrI ACTGGG 1 cut(s) 370
BmsI GCATC 3 cut(s) 280, 1075, 1168
BmtI GCTAGC 1 cut(s) 1143
BmuI ACTGGG 1 cut(s) 370
BoxI GACNNNNGTC 2 cut(s) 723, 1232
BpiI GAAGAC 3 cut(s) 158, 590, 807
BpuEI CTTGAG 2 cut(s) 410, 1422
Bsa29I ATCGAT 1 cut(s) 1083
BsaBI GATNNNNATC 1 cut(s) 402
BsaJI CCNNGG 4 cut(s) 591, 1149, 1481, 2019
BsaWI WCCGGW 1 cut(s) 1846
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 746
Bse118I RCCGGY 2 cut(s) 349, 523
Bse1I ACTGG 7 cut(s) 259, 376, 419, 514, 604, 1073, 1388
Bse21I CCTNAGG 1 cut(s) 1611
Bse3DI GCAATG 1 cut(s) 240
Bse8I GATNNNNATC 1 cut(s) 402
BseBI CCWGG 1 cut(s) 291
BseCI ATCGAT 1 cut(s) 1083
BseDI CCNNGG 4 cut(s) 591, 1149, 1481, 2019
BseGI GGATG 4 cut(s) 286, 506, 510, 1183
BseJI GATNNNNATC 1 cut(s) 402
BseLI CCNNNNNNNGG 2 cut(s) 144, 746
BseMI GCAATG 1 cut(s) 240
BseMII CTCAG 4 cut(s) 744, 1392, 1625, 1727
BseNI ACTGG 7 cut(s) 259, 376, 419, 514, 604, 1073, 1388
BseRI GAGGAG 1 cut(s) 1644
BseSI GKGCMC 1 cut(s) 1289
BseXI GCAGC 5 cut(s) 317, 320, 699, 1828, 1999
BsgI GTGCAG 2 cut(s) 174, 1827
Bsh1236I CGCG 4 cut(s) 1010, 1223, 1483, 1792
BshFI GGCC 4 cut(s) 523, 1412, 1421, 2024
BshVI ATCGAT 1 cut(s) 1083
BsiHKAI GWGCWC 1 cut(s) 1289
BsiHKCI CYCGRG 2 cut(s) 1520, 1809
BsiSI CCGG 4 cut(s) 350, 524, 1847, 2040
BslI CCNNNNNNNGG 2 cut(s) 144, 746
BsmAI GTCTC 3 cut(s) 179, 705, 1502
BsmBI CGTCTC 2 cut(s) 705, 1502
BsmI GAATGC 1 cut(s) 23
BsnI GGCC 4 cut(s) 523, 1412, 1421, 2024
BsoBI CYCGRG 2 cut(s) 1520, 1809
Bsp1286I GDGCHC 1 cut(s) 1289
Bsp1407I TGTACA 1 cut(s) 818
Bsp143I GATC 7 cut(s) 88, 403, 1297, 1347, 1485, 1854, 1937
BspACI CCGC 9 cut(s) 571, 918, 1223, 1481, 1483, 1599, 1790, 1823, 2025
BspANI GGCC 4 cut(s) 523, 1412, 1421, 2024
BspCNI CTCAG 4 cut(s) 745, 1393, 1624, 1726
BspDI ATCGAT 1 cut(s) 1083
BspFNI CGCG 4 cut(s) 1010, 1223, 1483, 1792
BspHI TCATGA 1 cut(s) 1906
BspLI GGNNCC 2 cut(s) 48, 135
BspOI GCTAGC 1 cut(s) 1143
BspPI GGATC 3 cut(s) 83, 1305, 1493
BspQI GCTCTTC 2 cut(s) 118, 1328
BspTI CTTAAG 2 cut(s) 500, 782
BsrBI CCGCTC 1 cut(s) 920
BsrDI GCAATG 1 cut(s) 240
BsrFI RCCGGY 2 cut(s) 349, 523
BsrGI TGTACA 1 cut(s) 818
BsrI ACTGG 7 cut(s) 259, 376, 419, 514, 604, 1073, 1388
BssAI RCCGGY 2 cut(s) 349, 523
BssECI CCNNGG 4 cut(s) 591, 1149, 1481, 2019
BssMI GATC 7 cut(s) 88, 403, 1297, 1347, 1485, 1854, 1937
BssT1I CCWWGG 2 cut(s) 591, 1149
Bst2UI CCWGG 1 cut(s) 291
Bst4CI ACNGT 5 cut(s) 366, 463, 1306, 1778, 2020
Bst6I CTCTTC 5 cut(s) 118, 1328, 1669, 1845, 1869
BstAFI CTTAAG 2 cut(s) 500, 782
BstAUI TGTACA 1 cut(s) 818
BstC8I GCNNGC 4 cut(s) 435, 525, 1141, 1901
BstDEI CTNAG 6 cut(s) 753, 978, 1388, 1401, 1611, 1713
BstDSI CCRYGG 2 cut(s) 1481, 2019
BstF5I GGATG 4 cut(s) 286, 506, 510, 1183
BstFNI CGCG 4 cut(s) 1010, 1223, 1483, 1792
BstKTI GATC 7 cut(s) 91, 406, 1300, 1350, 1488, 1857, 1940
BstMAI GTCTC 3 cut(s) 179, 705, 1502
BstMBI GATC 7 cut(s) 88, 403, 1297, 1347, 1485, 1854, 1937
BstMWI GCNNNNNNNGC 6 cut(s) 848, 1140, 1418, 1829, 1838, 2021
BstNI CCWGG 1 cut(s) 291
BstNSI RCATGY 1 cut(s) 1903
BstPAI GACNNNNGTC 2 cut(s) 723, 1232
BstSCI CCNGG 1 cut(s) 289
BstSFI CTRYAG 3 cut(s) 462, 1209, 1731
BstSLI GKGCMC 1 cut(s) 1289
BstUI CGCG 4 cut(s) 1010, 1223, 1483, 1792
BstV1I GCAGC 5 cut(s) 317, 320, 699, 1828, 1999
BstV2I GAAGAC 3 cut(s) 158, 590, 807
BstX2I RGATCY 2 cut(s) 1297, 1854
BstYI RGATCY 2 cut(s) 1297, 1854
Bsu15I ATCGAT 1 cut(s) 1083
Bsu36I CCTNAGG 1 cut(s) 1611
BsuRI GGCC 4 cut(s) 523, 1412, 1421, 2024
BsuTUI ATCGAT 1 cut(s) 1083
BtgI CCRYGG 2 cut(s) 1481, 2019
BtsCI GGATG 4 cut(s) 286, 506, 510, 1183
BtsI GCAGTG 1 cut(s) 1316
BtsIMutI CAGTG 2 cut(s) 1316, 1783
Cac8I GCNNGC 4 cut(s) 435, 525, 1141, 1901
CaiI CAGNNNCTG 1 cut(s) 254
CciI TCATGA 1 cut(s) 1906
Cfr10I RCCGGY 2 cut(s) 349, 523
Cfr13I GGNCC 1 cut(s) 1411
Cfr42I CCGCGG 1 cut(s) 1484
ClaI ATCGAT 1 cut(s) 1083
CseI GACGC 1 cut(s) 999
Csp6I GTAC 7 cut(s) 335, 386, 819, 871, 1498, 1717, 1969
CspCI CAANNNNNGTGG 2 cut(s) 205, 240
CviQI GTAC 7 cut(s) 335, 386, 819, 871, 1498, 1717, 1969
DdeI CTNAG 6 cut(s) 753, 978, 1388, 1401, 1611, 1713
DpnI GATC 7 cut(s) 90, 405, 1299, 1349, 1487, 1856, 1939
DpnII GATC 7 cut(s) 88, 403, 1297, 1347, 1485, 1854, 1937
EaeI YGGCCR 2 cut(s) 521, 2022
Eam1104I CTCTTC 5 cut(s) 118, 1328, 1669, 1845, 1869
EarI CTCTTC 5 cut(s) 118, 1328, 1669, 1845, 1869
Eco130I CCWWGG 2 cut(s) 591, 1149
Eco57I CTGAAG 2 cut(s) 884, 1985
Eco81I CCTNAGG 1 cut(s) 1611
Eco88I CYCGRG 2 cut(s) 1520, 1809
EcoRI GAATTC 2 cut(s) 637, 989
EcoRII CCWGG 1 cut(s) 289
EcoT14I CCWWGG 2 cut(s) 591, 1149
EcoT22I ATGCAT 1 cut(s) 25
ErhI CCWWGG 2 cut(s) 591, 1149
Esp3I CGTCTC 2 cut(s) 705, 1502
FalI AAGNNNNNCTT 6 cut(s) 531, 563, 575, 607, 857, 889
FauI CCCGC 4 cut(s) 564, 1488, 1592, 1797
FauNDI CATATG 3 cut(s) 643, 722, 790
FbaI TGATCA 2 cut(s) 403, 1347
FblI GTMKAC 1 cut(s) 465
Fnu4HI GCNGC 7 cut(s) 306, 309, 713, 918, 1842, 2013, 2025
FokI GGATG 4 cut(s) 273, 493, 497, 1190
Fsp4HI GCNGC 7 cut(s) 306, 309, 713, 918, 1842, 2013, 2025
FspBI CTAG 6 cut(s) 74, 1140, 1184, 1313, 1596, 1662
GluI GCNGC 7 cut(s) 306, 309, 713, 918, 1842, 2013, 2025
HaeIII GGCC 4 cut(s) 523, 1412, 1421, 2024
HapII CCGG 4 cut(s) 350, 524, 1847, 2040
HgaI GACGC 1 cut(s) 999
HincII GTYRAC 2 cut(s) 1044, 1123
HindII GTYRAC 2 cut(s) 1044, 1123
HinfI GANTC 6 cut(s) 730, 808, 1154, 1256, 1711, 1727
HpaII CCGG 4 cut(s) 350, 524, 1847, 2040
HphI GGTGA 3 cut(s) 313, 1171, 1237
Hpy166II GTNNAC 9 cut(s) 227, 466, 821, 1014, 1044, 1123, 1237, 1287, 1774
Hpy8I GTNNAC 9 cut(s) 227, 466, 821, 1014, 1044, 1123, 1237, 1287, 1774
HpyAV CCTTC 8 cut(s) 261, 499, 859, 1055, 1411, 1619, 1659, 1762
HpyCH4III ACNGT 5 cut(s) 366, 463, 1306, 1778, 2020
HpyCH4IV ACGT 1 cut(s) 1449
HpyF10VI GCNNNNNNNGC 6 cut(s) 848, 1140, 1418, 1829, 1838, 2021
HpyF3I CTNAG 6 cut(s) 753, 978, 1388, 1401, 1611, 1713
HpySE526I ACGT 1 cut(s) 1449
KroI GCCGGC 1 cut(s) 523
KroNI GCCGGC 1 cut(s) 525
Ksp22I TGATCA 2 cut(s) 403, 1347
KspI CCGCGG 1 cut(s) 1484
Kzo9I GATC 7 cut(s) 88, 403, 1297, 1347, 1485, 1854, 1937
LguI GCTCTTC 2 cut(s) 118, 1328
LmnI GCTCC 1 cut(s) 595
Lsp1109I GCAGC 5 cut(s) 317, 320, 699, 1828, 1999
LweI GCATC 3 cut(s) 280, 1075, 1168
MaeI CTAG 6 cut(s) 74, 1140, 1184, 1313, 1596, 1662
MaeII ACGT 1 cut(s) 1449
MaeIII GTNAC 8 cut(s) 319, 366, 619, 667, 1225, 1427, 1559, 1688
MalI GATC 7 cut(s) 90, 405, 1299, 1349, 1487, 1856, 1939
MbiI CCGCTC 1 cut(s) 920
MboI GATC 7 cut(s) 88, 403, 1297, 1347, 1485, 1854, 1937
MflI RGATCY 2 cut(s) 1297, 1854
MhlI GDGCHC 1 cut(s) 1289
MluCI AATT 9 cut(s) 127, 494, 637, 691, 989, 1108, 1240, 2032, 2055
MluI ACGCGT 1 cut(s) 1008
MlyI GAGTC 3 cut(s) 1148, 1705, 1736
MmeI TCCRAC 3 cut(s) 707, 1079, 1824
Mph1103I ATGCAT 1 cut(s) 25
MroNI GCCGGC 1 cut(s) 523
MroXI GAANNNNTTC 1 cut(s) 2055
MseI TTAA 8 cut(s) 174, 360, 411, 501, 626, 783, 1004, 1515
MslI CAYNNNNRTG 2 cut(s) 566, 1439
MspA1I CMGCKG 2 cut(s) 1483, 2027
MspCI CTTAAG 2 cut(s) 500, 782
MspI CCGG 4 cut(s) 350, 524, 1847, 2040
MspR9I CCNGG 1 cut(s) 291
Mva1269I GAATGC 1 cut(s) 23
MvaI CCWGG 1 cut(s) 291
MvnI CGCG 4 cut(s) 1010, 1223, 1483, 1792
MwoI GCNNNNNNNGC 6 cut(s) 848, 1140, 1418, 1829, 1838, 2021
NaeI GCCGGC 1 cut(s) 525
NdeI CATATG 3 cut(s) 643, 722, 790
NdeII GATC 7 cut(s) 88, 403, 1297, 1347, 1485, 1854, 1937
NgoMIV GCCGGC 1 cut(s) 523
NheI GCTAGC 1 cut(s) 1139
NlaIV GGNNCC 2 cut(s) 48, 135
NmuCI GTSAC 4 cut(s) 319, 366, 619, 1225
NsiI ATGCAT 1 cut(s) 25
NspI RCATGY 1 cut(s) 1903
OliI CACNNNNGTG 1 cut(s) 1439
PaeI GCATGC 1 cut(s) 1903
PaeR7I CTCGAG 1 cut(s) 1520
PagI TCATGA 1 cut(s) 1906
PciSI GCTCTTC 2 cut(s) 118, 1328
PctI GAATGC 1 cut(s) 23
PdiI GCCGGC 1 cut(s) 525
PdmI GAANNNNTTC 1 cut(s) 2055
PfeI GAWTC 3 cut(s) 730, 808, 1256
PkrI GCNGC 7 cut(s) 307, 310, 714, 919, 1843, 2014, 2026
PleI GAGTC 3 cut(s) 1148, 1705, 1735
PpsI GAGTC 3 cut(s) 1148, 1705, 1735
PshAI GACNNNNGTC 2 cut(s) 723, 1232
PshBI ATTAAT 1 cut(s) 1515
PsiI TTATAA 1 cut(s) 762
Psp6I CCWGG 1 cut(s) 289
PspGI CCWGG 1 cut(s) 289
PspN4I GGNNCC 2 cut(s) 48, 135
PspPI GGNCC 1 cut(s) 1411
PstNI CAGNNNCTG 1 cut(s) 254
PsuI RGATCY 2 cut(s) 1297, 1854
RsaI GTAC 7 cut(s) 336, 387, 820, 872, 1499, 1718, 1970
RsaNI GTAC 7 cut(s) 335, 386, 819, 871, 1498, 1717, 1969
RseI CAYNNNNRTG 2 cut(s) 566, 1439
SacII CCGCGG 1 cut(s) 1484
SapI GCTCTTC 2 cut(s) 118, 1328
SaqAI TTAA 8 cut(s) 174, 360, 411, 501, 626, 783, 1004, 1515
SatI GCNGC 7 cut(s) 306, 309, 713, 918, 1842, 2013, 2025
Sau3AI GATC 7 cut(s) 88, 403, 1297, 1347, 1485, 1854, 1937
Sau96I GGNCC 1 cut(s) 1411
ScaI AGTACT 2 cut(s) 872, 1718
SchI GAGTC 3 cut(s) 1148, 1705, 1736
ScrFI CCNGG 1 cut(s) 291
SduI GDGCHC 1 cut(s) 1289
SfaNI GCATC 3 cut(s) 280, 1075, 1168
SfcI CTRYAG 3 cut(s) 462, 1209, 1731
SfiI GGCCNNNNNGGCC 1 cut(s) 1418
Sfr274I CTCGAG 1 cut(s) 1520
Sfr303I CCGCGG 1 cut(s) 1484
SgrBI CCGCGG 1 cut(s) 1484
SlaI CTCGAG 1 cut(s) 1520
SmiMI CAYNNNNRTG 2 cut(s) 566, 1439
SmlI CTYRAG 5 cut(s) 425, 500, 782, 1437, 1520
SmoI CTYRAG 5 cut(s) 425, 500, 782, 1437, 1520
SpeI ACTAGT 1 cut(s) 73
SphI GCATGC 1 cut(s) 1903
Sse9I AATT 9 cut(s) 127, 494, 637, 691, 989, 1108, 1240, 2032, 2055
SsiI CCGC 9 cut(s) 571, 918, 1223, 1481, 1483, 1599, 1790, 1823, 2025
SspI AATATT 1 cut(s) 179
SspMI CTAG 6 cut(s) 74, 1140, 1184, 1313, 1596, 1662
StyD4I CCNGG 1 cut(s) 289
StyI CCWWGG 2 cut(s) 591, 1149
TaaI ACNGT 5 cut(s) 366, 463, 1306, 1778, 2020
TaiI ACGT 1 cut(s) 1452
TaqI TCGA 7 cut(s) 183, 283, 380, 396, 717, 1083, 1521
TasI AATT 9 cut(s) 127, 494, 637, 691, 989, 1108, 1240, 2032, 2055
TatI WGTACW 5 cut(s) 818, 870, 1497, 1716, 1968
TauI GCSGC 2 cut(s) 920, 2027
TfiI GAWTC 3 cut(s) 730, 808, 1256
Tru1I TTAA 8 cut(s) 174, 360, 411, 501, 626, 783, 1004, 1515
Tru9I TTAA 8 cut(s) 174, 360, 411, 501, 626, 783, 1004, 1515
TscAI CASTG 2 cut(s) 1323, 1783
TseFI GTSAC 4 cut(s) 319, 366, 619, 1225
TseI GCWGC 5 cut(s) 305, 308, 712, 1841, 2012
Tsp45I GTSAC 4 cut(s) 319, 366, 619, 1225
TspGWI ACGGA 1 cut(s) 160
TspRI CASTG 2 cut(s) 1323, 1783
Vha464I CTTAAG 2 cut(s) 500, 782
VneI GTGCAC 1 cut(s) 1285
VspI ATTAAT 1 cut(s) 1515
XapI RAATTY 5 cut(s) 127, 494, 637, 989, 2055
XbaI TCTAGA 1 cut(s) 1183
XceI RCATGY 1 cut(s) 1903
XhoI CTCGAG 1 cut(s) 1520
XmiI GTMKAC 1 cut(s) 465
XmnI GAANNNNTTC 1 cut(s) 2055
XspI CTAG 6 cut(s) 74, 1140, 1184, 1313, 1596, 1662
ZrmI AGTACT 2 cut(s) 872, 1718
Zsp2I ATGCAT 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.