Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0009501

Physical Location & Seq

Genomic Coordinates Reverse (-)

7246876 .. 7250019

Gene Structure 3144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g12801.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGGACTGGACTTCAAGTAACGCTTTCAAAAATTTCAAAGATGTGGAACCCAAGTCCATTATGGAAATGGGAGTCATTCCCCACATTGATGCAGGTGATATTGGTTTGGGGTCTTCTTCTGACAAGGGCAATGCTGCTACTCCTTCAACAAAGCCGAGAAAGAAGACCATGACGTCTGTTTATCTCAAGTTTTTCGAGACAGCTCAGGACGGGAAAAGCCGCCGCTGCAAGTTCTGCGGACAAAGCTATTCAATTGCTACCGCCACTGGCAATCTGGGGAGGCACCTAGGTAATCGGCATCCAGGGTACGATAAGTCGGGGGATGTTGTTGTCACCAGTCCTTCACCACAGCCCATCACTGTAATGAGGAAACATCAGCCTCAGTCTCAGTCTCAAGCAAAAGCAACTCAACTGGATTATGAACATTTGAATTGGTTGCTCGTTAAATGGCTTGCTTTAGCTTCGTTCCCTCCTTCCACATTGGACGAGAAGTGGCTAACAAACTCTTTTAAGTTCTTGAATCCATCGATACAGCTCTGGCCAAGTGAGGATTACAAGAAAATATTTCGTGATGTTTTCAGGAGTATGCAGGAAGTAGTAAGAGCGTCTTTGGACAATGTTTCTTCAAAGGTCTCCATCACACTTGACTTTTGGACTTCTTATGAAAGGATTTTTTACATGAGTGTCACCTGTCACTGGATTGATGAGAACTGGTCTTTTCAAAAGGCGATGCTTGATGTTTGTCACATTCCTTTCCCTTGTGGGGTTGTCGAGATCTACAGCTCTCTAGTGAAGGTCCTTAGGTTGTACAACATTGAGAGTAGGATACTCTCCTGCACCCATGATAACAGTCAGAGTGCCTTGCAGGATTTGGATGGTCAGAATGTGGGGCACTTCTGCTATATCCCCAGCTCTGTTCACACTTTGAGCTTGATTATAGATGATGGATTGAGAACCATAGAACGAGTAATTGCTAAGATCAGAGAGTTTGCACTTAGTTTAAATGCATCATCAGAGATCTCAGATGAATTTACTCAATTGACTGCAGCATACCATGAAGGCACTTGGAAAATTCCACTTGATACCTCAACACGGTGGAGTGGCAACTATCAGATGCTTGATATTGTATACAAGGCTTCCAAGTCCATGGATGCTGTTATCAGGAAGTATGAGACACTAGGCAGTAGGATGCTGCTGACCGCTGTGGAGAAGAATGCAGTCAATAATGTGCATCAATATCTACAACCCTTCTACAAAACCATAAAAAACATGTGCACAAACAAGGTGCCCACAGCTGGGCTAGTTCTCTTCTTCATGGATCACATTTCTGAGACGATTGCTGCATGCAGAGATTCACACCTTTATCCAGAGTTGAAGAATGCTATTGAAGACATGGCTAAAAAGGTCAGAAACTACAATAGCCAGATTTGCAACATATTTACCTACATGACAGCAATTCTTGATCCTCGAATTAAAGGAGAGCTAATTCCTGGATGCCTTAATTCAGACAATTTTCTCGAGGAAGCGAGAACCCATTTCATTAGAAACTATTCCATTAATCATTTCCCATCCATGGCTGGTGGATATAGCAATCAAGATATAGAGGAGGGAGGTAACGTCTCTTTTGCAGAGGAAATTGCCAGAAAGAAAAGAAGGGCAAACACAAACAATTCCTCTGATGAGCTCACTCAGTATCTGTCAGAGCCTCCAGCCCCATTAGCAACAGATGTTCTCGAGTGGTGGAAGGTCAATAGTATGCGCTACCCACGACTTTCTATAATGGCTCGGGATTTCTTGGCAGTGCAGGCAAATTCAGTGGCACCTGAAGAACTGTTCTGTGGCAAAGGTGCTGAAATGGATAAGCAGCGATTTTGCATGCCACATGATAGCACACAAGCTCTCCTTTGCATAAGGTCATGGTTACAAAGCGGGATGAAGTTGAAGTGTAGGACAGCCGAAATAGATTTTGAGCGTCTGATGGAACTAGCATCAAGTGCGGACAATCATAACAGTAGTACTGGTTCAGAGAAGAAACAAAGACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4413 Dimer_Tnp_hAT zf-BED

Protein Analysis

682

Amino Acids

77.27

Weight (kDa)

7.55

Isoelectric Point (pI)

47.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
hAT-like_RNase-H	PF14372	425 - 506	6.9e-12	hAT-like transposase, RNase-H fold
Dimer_Tnp_hAT	PF05699	561 - 641	2.8e-24	hAT family C-terminal dimerisation region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18560
fragaria_vesca	FvH4_5g12801 FvH4_5g12801 FvH4_5g12801 FvH4_5g12801 FvH4_5g12801
malus_domestica	MD06G1210000.v1.1 MD14G1220900.v1.1
prunus_persica	Prupe.5G216200_v2.0.a1 Prupe.5G216200_v2.0.a1
pyrus_communis	pycom06g18760 pycom06g18770 pycom14g18280
rosa_chinensis	RchiOBHm_Chr7g0184431
rosa_multiflora	Rmu_sc0038166.1_g000001 Rmu_sc0039138.1_g000001
rosa_roxburghii	Rroxscaffold_3G00269620
rosa_samantha	Rh7AG080000 Rh7BG067200 Rh7CG067500 Rh7DG067200
rosa_wichuraiana	Rw7G005530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	83
AasI	GACNNNNNNGTC	1 cut(s)	172
AatII	GACGTC	1 cut(s)	176
Acc36I	ACCTGC	1 cut(s)	83
AccB1I	GGYRCC	3 cut(s)	282, 1285, 1819
AccI	GTMKAC	1 cut(s)	1128
AciI	CCGC	7 cut(s)	220, 223, 237, 261, 1200, 1929, 1997
AclWI	GGATC	2 cut(s)	1326, 1457
AcoI	YGGCCR	1 cut(s)	539
AcsI	RAATTY	4 cut(s)	31, 1028, 1071, 1810
AcuI	CTGAAG	1 cut(s)	1845
AcyI	GRCGYC	1 cut(s)	173
AfaI	GTAC	3 cut(s)	308, 809, 2017
AfiI	CCNNNNNNNGG	6 cut(s)	696, 763, 1092, 1295, 1296, 1573
AflIII	ACRYGT	1 cut(s)	1269
AjnI	CCWGG	2 cut(s)	301, 1489
Alw21I	GWGCWC	2 cut(s)	1277, 1686
Alw26I	GTCTC	7 cut(s)	191, 390, 396, 637, 1166, 1325, 1624
Alw44I	GTGCAC	1 cut(s)	1273
AlwI	GGATC	2 cut(s)	1326, 1457
AlwNI	CAGNNNCTG	1 cut(s)	1696
Ama87I	CYCGRG	3 cut(s)	1517, 1733, 1785
AoxI	GGCC	1 cut(s)	539
ApaLI	GTGCAC	1 cut(s)	1273
ApeKI	GCWGC	6 cut(s)	134, 225, 1046, 1192, 1340, 1864
ApoI	RAATTY	4 cut(s)	31, 1028, 1071, 1810
AseI	ATTAAT	1 cut(s)	1557
Asp700I	GAANNNNTTC	1 cut(s)	1549
AspA2I	CCTAGG	1 cut(s)	286
AspLEI	GCGC	1 cut(s)	1761
AspS9I	GGNCC	1 cut(s)	796
AsuHPI	GGTGA	4 cut(s)	107, 325, 336, 679
AvaI	CYCGRG	3 cut(s)	1517, 1733, 1785
AvaII	GGWCC	1 cut(s)	796
AvrII	CCTAGG	1 cut(s)	286
AxyI	CCTNAGG	1 cut(s)	800
BaeGI	GKGCMC	3 cut(s)	894, 1277, 1290
BalI	TGGCCA	1 cut(s)	541
BanI	GGYRCC	3 cut(s)	282, 1285, 1819
BanII	GRGCYC	1 cut(s)	1686
BbsI	GAAGAC	3 cut(s)	105, 170, 1395
Bbv12I	GWGCWC	2 cut(s)	1277, 1686
BbvI	GCAGC	6 cut(s)	121, 212, 1058, 1179, 1327, 1876
BccI	CCATC	7 cut(s)	362, 532, 644, 869, 938, 1576, 1972
BciT130I	CCWGG	2 cut(s)	303, 1491
BciVI	GTATCC	1 cut(s)	819
BcoDI	GTCTC	7 cut(s)	191, 390, 396, 637, 1166, 1325, 1624
BfaI	CTAG	5 cut(s)	287, 788, 1178, 1301, 1985
BfmI	CTRYAG	2 cut(s)	778, 1044
BfuAI	ACCTGC	1 cut(s)	83
BfuI	GTATCC	1 cut(s)	819
BglII	AGATCT	2 cut(s)	774, 1017
BisI	GCNGC	8 cut(s)	135, 220, 223, 226, 1047, 1193, 1341, 1865
BlnI	CCTAGG	1 cut(s)	286
BlsI	GCNGC	8 cut(s)	136, 221, 224, 227, 1048, 1194, 1342, 1866
BmcAI	AGTACT	1 cut(s)	2017
Bme1390I	CCNGG	2 cut(s)	303, 1491
Bme18I	GGWCC	1 cut(s)	796
BmeT110I	CYCGRG	3 cut(s)	1517, 1733, 1785
BmgT120I	GGNCC	1 cut(s)	796
BmiI	GGNNCC	4 cut(s)	48, 284, 1287, 1821
BmrFI	CCNGG	2 cut(s)	303, 1491
BpiI	GAAGAC	3 cut(s)	105, 170, 1395
BpmI	CTGGAG	1 cut(s)	1692
Bpu10I	CCTNAGC	1 cut(s)	204
BpuEI	CTTGAG	2 cut(s)	170, 378
Bsa29I	ATCGAT	1 cut(s)	527
BsaHI	GRCGYC	1 cut(s)	173
BsaI	GGTCTC	1 cut(s)	637
BsaJI	CCNNGG	4 cut(s)	286, 302, 1146, 1572
BsaXI	ACNNNNNCTCC	4 cut(s)	1602, 1632, 1884, 1914
Bsc4I	CCNNNNNNNGG	6 cut(s)	696, 763, 1092, 1295, 1296, 1573
Bse1I	ACTGG	7 cut(s)	11, 271, 336, 417, 701, 716, 2023
Bse21I	CCTNAGG	1 cut(s)	800
Bse3DI	GCAATG	1 cut(s)	136
BseBI	CCWGG	2 cut(s)	303, 1491
BseCI	ATCGAT	1 cut(s)	527
BseDI	CCNNGG	4 cut(s)	286, 302, 1146, 1572
BseGI	GGATG	8 cut(s)	298, 328, 880, 1156, 1194, 1499, 1568, 1938
BseLI	CCNNNNNNNGG	6 cut(s)	696, 763, 1092, 1295, 1296, 1573
BseMI	GCAATG	1 cut(s)	136
BseMII	CTCAG	6 cut(s)	218, 395, 401, 1035, 1320, 1703
BseNI	ACTGG	7 cut(s)	11, 271, 336, 417, 701, 716, 2023
BseRI	GAGGAG	1 cut(s)	1619
BseSI	GKGCMC	3 cut(s)	894, 1277, 1290
BseXI	GCAGC	6 cut(s)	121, 212, 1058, 1179, 1327, 1876
BseYI	CCCAGC	2 cut(s)	908, 1295
BsgI	GTGCAG	2 cut(s)	820, 1823
BshFI	GGCC	1 cut(s)	541
BshNI	GGYRCC	3 cut(s)	282, 1285, 1819
BshVI	ATCGAT	1 cut(s)	527
BsiHKAI	GWGCWC	2 cut(s)	1277, 1686
BsiHKCI	CYCGRG	3 cut(s)	1517, 1733, 1785
BslI	CCNNNNNNNGG	6 cut(s)	696, 763, 1092, 1295, 1296, 1573
BsmAI	GTCTC	7 cut(s)	191, 390, 396, 637, 1166, 1325, 1624
BsmBI	CGTCTC	2 cut(s)	1325, 1624
BsmI	GAATGC	2 cut(s)	1219, 1384
BsnI	GGCC	1 cut(s)	541
Bso31I	GGTCTC	1 cut(s)	637
BsoBI	CYCGRG	3 cut(s)	1517, 1733, 1785
Bsp1286I	GDGCHC	4 cut(s)	894, 1277, 1290, 1686
Bsp1407I	TGTACA	1 cut(s)	807
Bsp143I	GATC	5 cut(s)	774, 978, 1017, 1318, 1462
Bsp19I	CCATGG	2 cut(s)	1146, 1572
BspACI	CCGC	7 cut(s)	220, 223, 237, 261, 1200, 1929, 1997
BspANI	GGCC	1 cut(s)	541
BspCNI	CTCAG	6 cut(s)	217, 394, 400, 1034, 1321, 1702
BspDI	ATCGAT	1 cut(s)	527
BspLI	GGNNCC	4 cut(s)	48, 284, 1287, 1821
BspMAI	CTGCAG	1 cut(s)	1048
BspMI	ACCTGC	1 cut(s)	83
BspPI	GGATC	2 cut(s)	1326, 1457
BspT107I	GGYRCC	3 cut(s)	282, 1285, 1819
BspTNI	GGTCTC	1 cut(s)	637
BsrDI	GCAATG	1 cut(s)	136
BsrGI	TGTACA	1 cut(s)	807
BsrI	ACTGG	7 cut(s)	11, 271, 336, 417, 701, 716, 2023
BssECI	CCNNGG	4 cut(s)	286, 302, 1146, 1572
BssMI	GATC	5 cut(s)	774, 978, 1017, 1318, 1462
BssNAI	GTATAC	1 cut(s)	1129
BssNI	GRCGYC	1 cut(s)	173
BssT1I	CCWWGG	3 cut(s)	286, 1146, 1572
Bst1107I	GTATAC	1 cut(s)	1129
Bst2UI	CCWGG	2 cut(s)	303, 1491
Bst4CI	ACNGT	5 cut(s)	361, 851, 1095, 1833, 2012
Bst6I	CTCTTC	1 cut(s)	1313
BstACI	GRCGYC	1 cut(s)	173
BstAPI	GCANNNNNTGC	2 cut(s)	234, 1994
BstAUI	TGTACA	1 cut(s)	807
BstC8I	GCNNGC	4 cut(s)	453, 1345, 1806, 1877
BstDEI	CTNAG	9 cut(s)	204, 381, 387, 800, 975, 995, 1021, 1329, 1689
BstDSI	CCRYGG	2 cut(s)	1146, 1572
BstF5I	GGATG	8 cut(s)	298, 328, 880, 1156, 1194, 1499, 1568, 1938
BstHHI	GCGC	1 cut(s)	1761
BstKTI	GATC	5 cut(s)	777, 981, 1020, 1321, 1465
BstMAI	GTCTC	7 cut(s)	191, 390, 396, 637, 1166, 1325, 1624
BstMBI	GATC	5 cut(s)	774, 978, 1017, 1318, 1462
BstMWI	GCNNNNNNNGC	7 cut(s)	225, 234, 243, 1428, 1718, 1805, 1994
BstNI	CCWGG	2 cut(s)	303, 1491
BstNSI	RCATGY	3 cut(s)	1273, 1347, 1879
BstSCI	CCNGG	2 cut(s)	301, 1489
BstSFI	CTRYAG	2 cut(s)	778, 1044
BstSLI	GKGCMC	3 cut(s)	894, 1277, 1290
BstV1I	GCAGC	6 cut(s)	121, 212, 1058, 1179, 1327, 1876
BstV2I	GAAGAC	3 cut(s)	105, 170, 1395
BstX2I	RGATCY	2 cut(s)	774, 1017
BstXI	CCANNNNNNTGG	1 cut(s)	1147
BstYI	RGATCY	2 cut(s)	774, 1017
BstZ17I	GTATAC	1 cut(s)	1129
Bsu15I	ATCGAT	1 cut(s)	527
Bsu36I	CCTNAGG	1 cut(s)	800
BsuI	GTATCC	1 cut(s)	819
BsuRI	GGCC	1 cut(s)	541
BsuTUI	ATCGAT	1 cut(s)	527
BtgI	CCRYGG	2 cut(s)	1146, 1572
BtgZI	GCGATG	1 cut(s)	743
BtsCI	GGATG	8 cut(s)	298, 328, 880, 1156, 1194, 1499, 1568, 1938
BtsI	GCAGTG	1 cut(s)	1806
BtsIMutI	CAGTG	5 cut(s)	264, 357, 694, 1806, 1821
BveI	ACCTGC	1 cut(s)	83
Cac8I	GCNNGC	4 cut(s)	453, 1345, 1806, 1877
CaiI	CAGNNNCTG	1 cut(s)	1696
CfoI	GCGC	1 cut(s)	1761
Cfr13I	GGNCC	1 cut(s)	796
ClaI	ATCGAT	1 cut(s)	527
CseI	GACGC	2 cut(s)	594, 1961
Csp6I	GTAC	3 cut(s)	307, 808, 2016
CspCI	CAANNNNNGTGG	2 cut(s)	1797, 1832
CviQI	GTAC	3 cut(s)	307, 808, 2016
DdeI	CTNAG	9 cut(s)	204, 381, 387, 800, 975, 995, 1021, 1329, 1689
DpnI	GATC	5 cut(s)	776, 980, 1019, 1320, 1464
DpnII	GATC	5 cut(s)	774, 978, 1017, 1318, 1462
DraI	TTTAAA	1 cut(s)	1002
DrdI	GACNNNNNNGTC	1 cut(s)	172
DseDI	GACNNNNNNGTC	1 cut(s)	172
EaeI	YGGCCR	1 cut(s)	539
Eam1104I	CTCTTC	1 cut(s)	1313
EarI	CTCTTC	1 cut(s)	1313
Ecl136II	GAGCTC	1 cut(s)	1684
Eco130I	CCWWGG	3 cut(s)	286, 1146, 1572
Eco24I	GRGCYC	1 cut(s)	1686
Eco31I	GGTCTC	1 cut(s)	637
Eco47I	GGWCC	1 cut(s)	796
Eco53kI	GAGCTC	1 cut(s)	1684
Eco57I	CTGAAG	1 cut(s)	1845
Eco81I	CCTNAGG	1 cut(s)	800
Eco88I	CYCGRG	3 cut(s)	1517, 1733, 1785
EcoICRI	GAGCTC	1 cut(s)	1684
EcoO109I	RGGNCCY	1 cut(s)	796
EcoRII	CCWGG	2 cut(s)	301, 1489
EcoT14I	CCWWGG	3 cut(s)	286, 1146, 1572
EcoT22I	ATGCAT	1 cut(s)	1009
EcoT38I	GRGCYC	1 cut(s)	1686
ErhI	CCWWGG	3 cut(s)	286, 1146, 1572
Esp3I	CGTCTC	2 cut(s)	1325, 1624
FalI	AAGNNNNNCTT	6 cut(s)	7, 39, 592, 624, 1887, 1919
FauI	CCCGC	1 cut(s)	1922
FblI	GTMKAC	1 cut(s)	1128
Fnu4HI	GCNGC	8 cut(s)	135, 220, 223, 226, 1047, 1193, 1341, 1865
FokI	GGATG	8 cut(s)	285, 335, 887, 1163, 1201, 1506, 1555, 1945
FriOI	GRGCYC	1 cut(s)	1686
Fsp4HI	GCNGC	8 cut(s)	135, 220, 223, 226, 1047, 1193, 1341, 1865
FspBI	CTAG	5 cut(s)	287, 788, 1178, 1301, 1985
GlaI	GCGC	1 cut(s)	1760
GluI	GCNGC	8 cut(s)	135, 220, 223, 226, 1047, 1193, 1341, 1865
GsaI	CCCAGC	2 cut(s)	912, 1299
GsuI	CTGGAG	1 cut(s)	1692
HaeIII	GGCC	1 cut(s)	541
HgaI	GACGC	2 cut(s)	594, 1961
HhaI	GCGC	1 cut(s)	1761
Hin1I	GRCGYC	1 cut(s)	173
Hin6I	GCGC	1 cut(s)	1759
HinP1I	GCGC	1 cut(s)	1759
HinfI	GANTC	3 cut(s)	72, 520, 1352
HphI	GGTGA	4 cut(s)	107, 325, 336, 679
Hpy166II	GTNNAC	3 cut(s)	919, 1129, 1275
Hpy8I	GTNNAC	3 cut(s)	919, 1129, 1275
HpyAV	CCTTC	8 cut(s)	153, 351, 483, 787, 1052, 1258, 1647, 1738
HpyCH4III	ACNGT	5 cut(s)	361, 851, 1095, 1833, 2012
HpyCH4IV	ACGT	2 cut(s)	173, 1617
HpyF10VI	GCNNNNNNNGC	7 cut(s)	225, 234, 243, 1428, 1718, 1805, 1994
HpyF3I	CTNAG	9 cut(s)	204, 381, 387, 800, 975, 995, 1021, 1329, 1689
HpySE526I	ACGT	2 cut(s)	173, 1617
Hsp92I	GRCGYC	1 cut(s)	173
HspAI	GCGC	1 cut(s)	1759
Kzo9I	GATC	5 cut(s)	774, 978, 1017, 1318, 1462
Lsp1109I	GCAGC	6 cut(s)	121, 212, 1058, 1179, 1327, 1876
MaeI	CTAG	5 cut(s)	287, 788, 1178, 1301, 1985
MaeII	ACGT	2 cut(s)	173, 1617
MaeIII	GTNAC	7 cut(s)	17, 331, 685, 692, 743, 1613, 1920
MalI	GATC	5 cut(s)	776, 980, 1019, 1320, 1464
MboI	GATC	5 cut(s)	774, 978, 1017, 1318, 1462
MfeI	CAATTG	2 cut(s)	252, 1037
MflI	RGATCY	2 cut(s)	774, 1017
MhlI	GDGCHC	4 cut(s)	894, 1277, 1290, 1686
MlsI	TGGCCA	1 cut(s)	541
MluNI	TGGCCA	1 cut(s)	541
MlyI	GAGTC	1 cut(s)	81
Mox20I	TGGCCA	1 cut(s)	541
Mph1103I	ATGCAT	1 cut(s)	1009
MroXI	GAANNNNTTC	1 cut(s)	1549
MscI	TGGCCA	1 cut(s)	541
MseI	TTAA	6 cut(s)	444, 510, 1001, 1473, 1500, 1557
MslI	CAYNNNNRTG	2 cut(s)	87, 362
Msp20I	TGGCCA	1 cut(s)	541
MspA1I	CMGCKG	3 cut(s)	225, 1202, 1295
MspR9I	CCNGG	2 cut(s)	303, 1491
MunI	CAATTG	2 cut(s)	252, 1037
Mva1269I	GAATGC	2 cut(s)	1219, 1384
MvaI	CCWGG	2 cut(s)	303, 1491
MwoI	GCNNNNNNNGC	7 cut(s)	225, 234, 243, 1428, 1718, 1805, 1994
NcoI	CCATGG	2 cut(s)	1146, 1572
NdeII	GATC	5 cut(s)	774, 978, 1017, 1318, 1462
NlaIV	GGNNCC	4 cut(s)	48, 284, 1287, 1821
NmeAIII	GCCGAG	1 cut(s)	180
NmuCI	GTSAC	4 cut(s)	331, 685, 692, 743
NsiI	ATGCAT	1 cut(s)	1009
NspI	RCATGY	3 cut(s)	1273, 1347, 1879
PaeI	GCATGC	2 cut(s)	1347, 1879
PaeR7I	CTCGAG	2 cut(s)	1517, 1733
PaqCI	CACCTGC	1 cut(s)	83
PciI	ACATGT	1 cut(s)	1269
PctI	GAATGC	2 cut(s)	1219, 1384
PdmI	GAANNNNTTC	1 cut(s)	1549
PfeI	GAWTC	2 cut(s)	520, 1352
PfoI	TCCNGGA	1 cut(s)	1489
PkrI	GCNGC	8 cut(s)	136, 221, 224, 227, 1048, 1194, 1342, 1866
PleI	GAGTC	1 cut(s)	80
PpsI	GAGTC	1 cut(s)	80
PpuMI	RGGWCCY	1 cut(s)	796
PscI	ACATGT	1 cut(s)	1269
PshBI	ATTAAT	1 cut(s)	1557
Psp124BI	GAGCTC	1 cut(s)	1686
Psp5II	RGGWCCY	1 cut(s)	796
Psp6I	CCWGG	2 cut(s)	301, 1489
PspFI	CCCAGC	2 cut(s)	908, 1295
PspGI	CCWGG	2 cut(s)	301, 1489
PspN4I	GGNNCC	4 cut(s)	48, 284, 1287, 1821
PspPI	GGNCC	1 cut(s)	796
PspPPI	RGGWCCY	1 cut(s)	796
PsrI	GAACNNNNNNTAC	2 cut(s)	2005, 2037
PstI	CTGCAG	1 cut(s)	1048
PstNI	CAGNNNCTG	1 cut(s)	1696
PsuI	RGATCY	2 cut(s)	774, 1017
PvuII	CAGCTG	1 cut(s)	1295
RsaI	GTAC	3 cut(s)	308, 809, 2017
RsaNI	GTAC	3 cut(s)	307, 808, 2016
RseI	CAYNNNNRTG	2 cut(s)	87, 362
SacI	GAGCTC	1 cut(s)	1686
SaqAI	TTAA	6 cut(s)	444, 510, 1001, 1473, 1500, 1557
SatI	GCNGC	8 cut(s)	135, 220, 223, 226, 1047, 1193, 1341, 1865
Sau3AI	GATC	5 cut(s)	774, 978, 1017, 1318, 1462
Sau96I	GGNCC	1 cut(s)	796
ScaI	AGTACT	1 cut(s)	2017
SchI	GAGTC	1 cut(s)	81
ScrFI	CCNGG	2 cut(s)	303, 1491
SduI	GDGCHC	4 cut(s)	894, 1277, 1290, 1686
SfcI	CTRYAG	2 cut(s)	778, 1044
Sfr274I	CTCGAG	2 cut(s)	1517, 1733
SinI	GGWCC	1 cut(s)	796
SlaI	CTCGAG	2 cut(s)	1517, 1733
SmiMI	CAYNNNNRTG	2 cut(s)	87, 362
SmlI	CTYRAG	4 cut(s)	185, 393, 1517, 1733
SmoI	CTYRAG	4 cut(s)	185, 393, 1517, 1733
SphI	GCATGC	2 cut(s)	1347, 1879
SsiI	CCGC	7 cut(s)	220, 223, 237, 261, 1200, 1929, 1997
SspI	AATATT	1 cut(s)	564
SspMI	CTAG	5 cut(s)	287, 788, 1178, 1301, 1985
SstI	GAGCTC	1 cut(s)	1686
StyD4I	CCNGG	2 cut(s)	301, 1489
StyI	CCWWGG	3 cut(s)	286, 1146, 1572
TaaI	ACNGT	5 cut(s)	361, 851, 1095, 1833, 2012
TaiI	ACGT	2 cut(s)	176, 1620
TaqI	TCGA	6 cut(s)	195, 527, 771, 1468, 1518, 1734
TatI	WGTACW	2 cut(s)	807, 2015
TauI	GCSGC	2 cut(s)	222, 225
TfiI	GAWTC	2 cut(s)	520, 1352
Tru1I	TTAA	6 cut(s)	444, 510, 1001, 1473, 1500, 1557
Tru9I	TTAA	6 cut(s)	444, 510, 1001, 1473, 1500, 1557
TscAI	CASTG	5 cut(s)	271, 364, 701, 1806, 1821
TseFI	GTSAC	4 cut(s)	331, 685, 692, 743
TseI	GCWGC	6 cut(s)	134, 225, 1046, 1192, 1340, 1864
Tsp45I	GTSAC	4 cut(s)	331, 685, 692, 743
TspDTI	ATGAA	7 cut(s)	435, 678, 1041, 1071, 1303, 1528, 1949
TspRI	CASTG	5 cut(s)	271, 364, 701, 1806, 1821
VneI	GTGCAC	1 cut(s)	1273
VpaK11BI	GGWCC	1 cut(s)	796
VspI	ATTAAT	1 cut(s)	1557
XapI	RAATTY	4 cut(s)	31, 1028, 1071, 1810
XceI	RCATGY	3 cut(s)	1273, 1347, 1879
XcmI	CCANNNNNNNNNTGG	3 cut(s)	58, 64, 271
XhoI	CTCGAG	2 cut(s)	1517, 1733
XmaJI	CCTAGG	1 cut(s)	286
XmiI	GTMKAC	1 cut(s)	1128
XmnI	GAANNNNTTC	1 cut(s)	1549
XspI	CTAG	5 cut(s)	287, 788, 1178, 1301, 1985
ZraI	GACGTC	1 cut(s)	174
ZrmI	AGTACT	1 cut(s)	2017
Zsp2I	ATGCAT	1 cut(s)	1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.