AT1G18900

repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005339
Physical Location & Seq
Forward (+)
6528984 .. 6532697
3714 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G18900.1

Sequence Viewer

Length: 2583 bp
ATGATACGCGCTAAGCATATTAGTAACCTTTCAAGTACAGCAAGATCCTTTTTTCTGAATGGATCGAGAACAAGTGTAACTGATGGGAATTCTTGTGTGTACTCGGATGATGAAAATTGTGTCTCGAAACGTCAGCAACTTAGGAAGGAAGCTGGACAGACTGAAAAACGACCATCCAGTATCCTCCCAAAGCCTTCAGTTGTGGGATGTATATTACCAGGAGAGGTAACAAAACCAGTGGTTCCAAAGAAGGTTGATGATTTTGGTCGGCCATCTCTATTGCCACAGCATGTTTCTTCTTCCCCTGCCTTGCCGCTTAAATCACATTCCGTTAACTATGCATCAACCGTCGTTAGAGAGGAGGTGGAAGGTAAAGCTTCTTCAGAACCTATTGGGGATCAGATTTTCAAGGCTGGTATTGTTGCAGTAAATTTTCTGTCAGATTTATCGAATTGTAAGATTCCTTCATATGATGGAGGAAGCGATGCATTTGGATTACCGAAAAGCTGTATGGTTGATCCAACACGGCCTATTTCAAGTGTCAAGTCGTCGAATGTGAAAGCTATAAGAAGAGAGCACTTTGCCAAAATTTACCCTAGATCAGCTGCAAAAGAGTCGTCAGTTGGTACAACTAGAAATCCCAGTAGCAATTTTCGAGGGGCCAAGGAAGCTGAAAGAACTGGGTTTGTTAAAGGATTCAGACAAGTTTCAAATTCTGTGGTAGGAAAGTCATTACCCACAACAAATAACACATATGGCAAGAGGACAAGCGTGTTGCAGAGACCCCATATTGATTCGAACAGGTTTGTGCCAAGCGGTTTCAGTAATTCTTCAGTGGAAATGATGAAAGGACCTTCAGGGACTGCTCTGACATCAAGACAGTATTGTAATTCCGGACACATTGTGGAAAATGTTTCCAGCGTTTTACGAAGATTCAGGTGGGGGCCTGCTGCTGAAGAGGCCCTTCAAAATCTAGGTTTGAGGATAGACGCATACCAAGCAAACCAAGTTCTTAAGCAGATGAATGACTATGGAAATGCTCTTGGTTTCTTCTACTGGTTAAAAAGGCAACCTGGGTTTAAGCATGATGGGCATACTTATACCACTATGGTTGGTAATCTCGGTCGTGCTAAGCAATTTGGTGCAATAAACAAGCTCCTCGATGAGATGGTTAGAGATGGATGTCAGCCAAACACAGTTACATATAACCGACTTATCCACAGCTATGGCCGTGCCAATTACCTGAACGAAGCTATGAATGTGTTCAATCAAATGCAAGAGGCTGGATGCAAACCTGACCGTGTAACTTACTGTACCCTTATAGACATTCATGCTAAAGCTGGATTTCTTGACATTGCCATGGATATGTACCAGAGAATGCAGGCAGGAGGTCTTTCTCCGGATACTTTCACTTACAGTGTCATAATAAACTGTCTTGGAAAAGCTGGACATTTACCCGCTGCACACAAGCTCTTTTGTGAGATGGTTGATCAAGGTTGTACCCCTAACTTGGTCACATACAACATCATGATGGACTTGCATGCCAAAGCGAGAAACTATCAGAATGCGTTGAAGCTTTACCGTGACATGCAAAACGCTGGGTTTGAGCCTGACAAAGTGACATACAGCATTGTGATGGAGGTGCTTGGACACTGTGGATATCTCGAGGAAGCAGAGGCTGTTTTCACCGAGATGCAACAGAAAAATTGGATTCCTGATGAGCCAGTTTATGGTCTTTTGGTGGATTTGTGGGGAAAAGCAGGTAATGTGGAAAAGGCGTGGCAATGGTATCAAGCAATGCTTCATGCTGGTCTGCGACCTAATGTTCCTACATGCAACTCCCTTCTTAGTACCTTCCTTAGGGTTAACAAGATAGCTGAAGCTTATGAGTTATTACAAAACATGCTGGCGCTTGGTCTACGCCCCTCTTTGCAGACATACACGTTACTCTTGAGCTGTTGCACGGATGGTCGGTCAAAACTTGATATGGGTTTCTGTGGCCAGTTGATGGCAAGCACAGGTCATCCAGCACATATGTTTCTCCTCAAGATGCCAGCTGCGGGTCCGGATGGCGAAAACGTGCGCAACCATGCGAACAATTTCCTGGATCTTATGCATAGCGAGGACAGGGAGAGCAAGCGAGGACTCGTGGATGCGGTGGTTGACTTTCTACATAAGTCCGGGCAAAAAGAAGAGGCCGGATCTGTCTGGGAAGTTGCTGCACAAAAGAATGTGTTTCCTGATGCATTAAGGGAGAAAAGCTGCAGCTACTGGCTTATCAATCTCCATGTAATGTCAGAGGGAACTGCAGTCACCGCGCTGTCTAGGACGCTTGCTTGGTTCCGTAAGCAGATGTTAGCTTCAGGAACTTGCCCTTCTCGGATTGATATAGTAACTGGTTGGGGAAGACGTAGTAGAGTCACCGGTACATCAATGGTGAGACAAGCAGTTGAGGAGCTGCTGAACATCTTTGGTTCACCGTTTTTCACGGAGAGTGGAAACTCAGGTTGTTTCGTTGGAAGCGGAGAGCCTCTTAACAGATGGTTGCTGCAGTCTCATGTTGAGAGGATGCATTTGCTGTGA

Protein Analysis

860

Amino Acids

95.21

Weight (kDa)

8.98

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 359 - 410 2.1e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 365 - 406 1.2e-08 PPR repeat family
PPR_3 PF13812 385 - 443 6.7e-14 Pentatricopeptide repeat domain
TPR_24 PF23276 392 - 493 1.3e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 393 - 426 7.4e-11 PPR repeat
PPR_2 PF13041 397 - 445 2.1e-16 PPR repeat family
PPR PF01535 400 - 430 1.7e-07 PPR repeat
PPR_3 PF13812 421 - 481 1.8e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 429 - 460 6.8e-07 PPR repeat
PPR_2 PF13041 439 - 481 4.3e-08 PPR repeat family
TPR_24 PF23276 442 - 564 7.7e-06 Fungal tetratrico peptide repeats
PPR_long PF17177 453 - 553 4.9e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 458 - 513 1.2e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 464 - 496 1.2e-07 PPR repeat
PPR PF01535 470 - 500 7.8e-06 PPR repeat
PPR_2 PF13041 475 - 515 2.3e-11 PPR repeat family
PPR_3 PF13812 490 - 550 9.6e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 502 - 549 1.7e-14 PPR repeat family
PPR PF01535 505 - 535 6.2e-06 PPR repeat
PPR_long PF17177 556 - 656 5.1e-07 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 572 - 619 2.2e-06 PPR repeat family
PPR_3 PF13812 600 - 655 7.6e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 607 - 654 9.4e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2084
Acc36I ACCTGC 1 cut(s) 1751
AccB7I CCANNNNNTGG 2 cut(s) 1730, 2008
AccI GTMKAC 1 cut(s) 1918
AccII CGCG 2 cut(s) 9, 2318
AccIII TCCGGA 3 cut(s) 893, 1399, 2065
AciI CCGC 7 cut(s) 314, 816, 1458, 2060, 2156, 2316, 2523
AclWI GGATC 6 cut(s) 39, 70, 405, 512, 2115, 2209
AcoI YGGCCR 3 cut(s) 269, 1228, 1999
AcsI RAATTY 4 cut(s) 88, 430, 588, 712
AcuI CTGAAG 7 cut(s) 180, 366, 816, 840, 975, 1899, 2346
AdeI CACNNNGTG 1 cut(s) 904
AfaI GTAC 8 cut(s) 37, 101, 628, 1315, 1370, 1501, 1852, 2428
AfiI CCNNNNNNNGG 5 cut(s) 1510, 1730, 1860, 2008, 2060
AflII CTTAAG 1 cut(s) 1013
AflIII ACRYGT 1 cut(s) 1941
AgeI ACCGGT 1 cut(s) 2423
AgsI TTSAA 7 cut(s) 33, 409, 537, 711, 968, 1267, 1573
AjnI CCWGG 3 cut(s) 217, 1072, 2103
Alw21I GWGCWC 1 cut(s) 579
Alw26I GTCTC 4 cut(s) 127, 775, 2434, 2559
AlwI GGATC 6 cut(s) 39, 70, 405, 512, 2115, 2209
AlwNI CAGNNNCTG 3 cut(s) 863, 1679, 2271
Ama87I CYCGRG 1 cut(s) 1664
Aor13HI TCCGGA 3 cut(s) 893, 1399, 2065
AoxI GGCC 8 cut(s) 269, 527, 660, 944, 960, 1228, 1999, 2196
ApeKI GCWGC 9 cut(s) 605, 950, 1460, 2057, 2219, 2262, 2265, 2458, 2548
ApoI RAATTY 4 cut(s) 88, 430, 588, 712
ArsI GACNNNNNNTTYG 2 cut(s) 602, 634
AsiGI ACCGGT 1 cut(s) 2423
Asp700I GAANNNNTTC 2 cut(s) 1262, 2099
AspLEI GCGC 4 cut(s) 11, 1912, 2085, 2320
AspS9I GGNCC 5 cut(s) 660, 851, 944, 961, 2063
AsuC2I CCSGG 1 cut(s) 2182
AsuHPI GGTGA 5 cut(s) 1678, 2305, 2413, 2449, 2469
AsuII TTCGAA 1 cut(s) 797
AvaI CYCGRG 1 cut(s) 1664
AvaII GGWCC 2 cut(s) 851, 2063
AxyI CCTNAGG 1 cut(s) 1859
BalI TGGCCA 1 cut(s) 2001
BarI GAAGNNNNNNTAC 4 cut(s) 364, 396, 448, 480
BauI CACGAG 1 cut(s) 2147
BbsI GAAGAC 1 cut(s) 2413
Bbv12I GWGCWC 1 cut(s) 579
BbvI GCAGC 9 cut(s) 592, 937, 1447, 2044, 2206, 2249, 2277, 2445, 2535
BceAI ACGGC 2 cut(s) 542, 1215
BcgI CGANNNNNNTGC 2 cut(s) 597, 631
BciT130I CCWGG 3 cut(s) 219, 1074, 2105
BciVI GTATCC 2 cut(s) 191, 1396
BclI TGATCA 1 cut(s) 1489
BcnI CCSGG 1 cut(s) 2182
BcoDI GTCTC 4 cut(s) 127, 775, 2434, 2559
BfaI CTAG 4 cut(s) 597, 633, 974, 2325
BfmI CTRYAG 3 cut(s) 2263, 2307, 2549
BfoI RGCGCY 1 cut(s) 1913
BfrI CTTAAG 1 cut(s) 1013
BfuAI ACCTGC 1 cut(s) 1751
BfuI GTATCC 2 cut(s) 191, 1396
BlpI GCTNAGC 2 cut(s) 12, 1131
Bme1390I CCNGG 4 cut(s) 219, 1074, 2105, 2182
Bme18I GGWCC 2 cut(s) 851, 2063
BmeT110I CYCGRG 1 cut(s) 1664
BmgT120I GGNCC 5 cut(s) 660, 851, 944, 961, 2063
BmiI GGNNCC 5 cut(s) 243, 661, 945, 2064, 2342
BmrFI CCNGG 4 cut(s) 219, 1074, 2105, 2182
BmrI ACTGGG 2 cut(s) 636, 690
BmsI GCATC 8 cut(s) 350, 475, 1277, 1683, 2040, 2143, 2233, 2559
BmuI ACTGGG 2 cut(s) 636, 690
BpiI GAAGAC 1 cut(s) 2413
Bpu1102I GCTNAGC 2 cut(s) 12, 1131
Bpu14I TTCGAA 1 cut(s) 797
BpuEI CTTGAG 2 cut(s) 1972, 2030
BpuMI CCSGG 1 cut(s) 2182
BsaI GGTCTC 1 cut(s) 775
BsaJI CCNNGG 3 cut(s) 663, 1073, 1359
BsaWI WCCGGW 4 cut(s) 893, 1399, 2065, 2423
Bsc4I CCNNNNNNNGG 5 cut(s) 1510, 1730, 1860, 2008, 2060
Bse118I RCCGGY 1 cut(s) 2423
Bse1I ACTGG 9 cut(s) 177, 236, 642, 685, 1061, 1724, 2002, 2276, 2401
Bse21I CCTNAGG 1 cut(s) 1859
Bse3DI GCAATG 3 cut(s) 1353, 1790, 1803
BseAI TCCGGA 3 cut(s) 893, 1399, 2065
BseBI CCWGG 3 cut(s) 219, 1074, 2105
BseDI CCNNGG 3 cut(s) 663, 1073, 1359
BseLI CCNNNNNNNGG 5 cut(s) 1510, 1730, 1860, 2008, 2060
BseMI GCAATG 3 cut(s) 1353, 1790, 1803
BseMII CTCAG 1 cut(s) 2517
BseNI ACTGG 9 cut(s) 177, 236, 642, 685, 1061, 1724, 2002, 2276, 2401
BseRI GAGGAG 4 cut(s) 374, 1148, 2033, 2468
BseXI GCAGC 9 cut(s) 592, 937, 1447, 2044, 2206, 2249, 2277, 2445, 2535
BseYI CCCAGC 1 cut(s) 1598
BsgI GTGCAG 2 cut(s) 1446, 2205
Bsh1236I CGCG 2 cut(s) 9, 2318
Bsh1285I CGRYCG 1 cut(s) 1126
BshFI GGCC 8 cut(s) 271, 529, 662, 946, 962, 1230, 2001, 2198
BshTI ACCGGT 1 cut(s) 2423
BsiEI CGRYCG 1 cut(s) 1126
BsiHKAI GWGCWC 1 cut(s) 579
BsiHKCI CYCGRG 1 cut(s) 1664
BsiSI CCGG 6 cut(s) 894, 1400, 2066, 2181, 2199, 2424
BslFI GGGAC 1 cut(s) 874
BslI CCNNNNNNNGG 5 cut(s) 1510, 1730, 1860, 2008, 2060
BsmAI GTCTC 4 cut(s) 127, 775, 2434, 2559
BsmFI GGGAC 1 cut(s) 874
BsmI GAATGC 2 cut(s) 1383, 1570
BsnI GGCC 8 cut(s) 271, 529, 662, 946, 962, 1230, 2001, 2198
Bso31I GGTCTC 1 cut(s) 775
BsoBI CYCGRG 1 cut(s) 1664
Bsp119I TTCGAA 1 cut(s) 797
Bsp1286I GDGCHC 1 cut(s) 579
Bsp13I TCCGGA 3 cut(s) 893, 1399, 2065
Bsp143I GATC 8 cut(s) 44, 62, 397, 517, 599, 1489, 2107, 2201
Bsp1720I GCTNAGC 2 cut(s) 12, 1131
Bsp19I CCATGG 1 cut(s) 1359
BspACI CCGC 7 cut(s) 314, 816, 1458, 2060, 2156, 2316, 2523
BspANI GGCC 8 cut(s) 271, 529, 662, 946, 962, 1230, 2001, 2198
BspCNI CTCAG 1 cut(s) 2516
BspEI TCCGGA 3 cut(s) 893, 1399, 2065
BspFNI CGCG 2 cut(s) 9, 2318
BspHI TCATGA 1 cut(s) 1527
BspLI GGNNCC 5 cut(s) 243, 661, 945, 2064, 2342
BspMAI CTGCAG 3 cut(s) 2267, 2311, 2553
BspMI ACCTGC 1 cut(s) 1751
BspPI GGATC 6 cut(s) 39, 70, 405, 512, 2115, 2209
BspT104I TTCGAA 1 cut(s) 797
BspTI CTTAAG 1 cut(s) 1013
BspTNI GGTCTC 1 cut(s) 775
BsrDI GCAATG 3 cut(s) 1353, 1790, 1803
BsrFI RCCGGY 1 cut(s) 2423
BsrI ACTGG 9 cut(s) 177, 236, 642, 685, 1061, 1724, 2002, 2276, 2401
BssAI RCCGGY 1 cut(s) 2423
BssECI CCNNGG 3 cut(s) 663, 1073, 1359
BssMI GATC 8 cut(s) 44, 62, 397, 517, 599, 1489, 2107, 2201
BssSI CACGAG 1 cut(s) 2147
BssT1I CCWWGG 2 cut(s) 663, 1359
Bst2BI CACGAG 1 cut(s) 2147
Bst2UI CCWGG 3 cut(s) 219, 1074, 2105
Bst6I CTCTTC 3 cut(s) 565, 951, 2187
BstAFI CTTAAG 1 cut(s) 1013
BstBI TTCGAA 1 cut(s) 797
BstC8I GCNNGC 8 cut(s) 948, 1383, 1542, 1908, 2014, 2055, 2138, 2334
BstDEI CTNAG 6 cut(s) 12, 140, 1131, 1847, 1859, 2503
BstDSI CCRYGG 1 cut(s) 1359
BstENI CCTNNNNNAGG 1 cut(s) 1858
BstFNI CGCG 2 cut(s) 9, 2318
BstH2I RGCGCY 1 cut(s) 1913
BstHHI GCGC 4 cut(s) 11, 1912, 2085, 2320
BstKTI GATC 8 cut(s) 47, 65, 400, 520, 602, 1492, 2110, 2204
BstMAI GTCTC 4 cut(s) 127, 775, 2434, 2559
BstMBI GATC 8 cut(s) 44, 62, 397, 517, 599, 1489, 2107, 2201
BstMCI CGRYCG 1 cut(s) 1126
BstMWI GCNNNNNNNGC 5 cut(s) 668, 959, 998, 1090, 2315
BstNI CCWGG 3 cut(s) 219, 1074, 2105
BstNSI RCATGY 5 cut(s) 293, 1544, 1591, 1836, 1906
BstSCI CCNGG 4 cut(s) 217, 1072, 2103, 2180
BstSFI CTRYAG 3 cut(s) 2263, 2307, 2549
BstUI CGCG 2 cut(s) 9, 2318
BstV1I GCAGC 9 cut(s) 592, 937, 1447, 2044, 2206, 2249, 2277, 2445, 2535
BstV2I GAAGAC 1 cut(s) 2413
BstX2I RGATCY 3 cut(s) 44, 2107, 2201
BstXI CCANNNNNNTGG 1 cut(s) 1226
BstYI RGATCY 3 cut(s) 44, 2107, 2201
Bsu36I CCTNAGG 1 cut(s) 1859
BsuI GTATCC 2 cut(s) 191, 1396
BsuRI GGCC 8 cut(s) 271, 529, 662, 946, 962, 1230, 2001, 2198
BtgI CCRYGG 1 cut(s) 1359
BtgZI GCGATG 1 cut(s) 498
BtsIMutI CAGTG 4 cut(s) 243, 840, 1423, 1651
BveI ACCTGC 1 cut(s) 1751
Cac8I GCNNGC 8 cut(s) 948, 1383, 1542, 1908, 2014, 2055, 2138, 2334
CaiI CAGNNNCTG 3 cut(s) 863, 1679, 2271
CciI TCATGA 1 cut(s) 1527
CfoI GCGC 4 cut(s) 11, 1912, 2085, 2320
Cfr10I RCCGGY 1 cut(s) 2423
Cfr13I GGNCC 5 cut(s) 660, 851, 944, 961, 2063
CseI GACGC 2 cut(s) 998, 2338
Csp6I GTAC 8 cut(s) 36, 100, 627, 1314, 1369, 1500, 1851, 2427
CspAI ACCGGT 1 cut(s) 2423
CspCI CAANNNNNGTGG 6 cut(s) 219, 254, 699, 734, 1093, 1128
CviQI GTAC 8 cut(s) 36, 100, 627, 1314, 1369, 1500, 1851, 2427
DdeI CTNAG 6 cut(s) 12, 140, 1131, 1847, 1859, 2503
DpnI GATC 8 cut(s) 46, 64, 399, 519, 601, 1491, 2109, 2203
DpnII GATC 8 cut(s) 44, 62, 397, 517, 599, 1489, 2107, 2201
DraIII CACNNNGTG 1 cut(s) 904
EaeI YGGCCR 3 cut(s) 269, 1228, 1999
Eam1104I CTCTTC 3 cut(s) 565, 951, 2187
EarI CTCTTC 3 cut(s) 565, 951, 2187
Eco130I CCWWGG 2 cut(s) 663, 1359
Eco31I GGTCTC 1 cut(s) 775
Eco32I GATATC 1 cut(s) 1661
Eco47I GGWCC 2 cut(s) 851, 2063
Eco57I CTGAAG 7 cut(s) 180, 366, 816, 840, 975, 1899, 2346
Eco81I CCTNAGG 1 cut(s) 1859
Eco88I CYCGRG 1 cut(s) 1664
EcoNI CCTNNNNNAGG 1 cut(s) 1858
EcoO109I RGGNCCY 3 cut(s) 851, 944, 961
EcoRI GAATTC 1 cut(s) 88
EcoRII CCWGG 3 cut(s) 217, 1072, 2103
EcoRV GATATC 1 cut(s) 1661
EcoT14I CCWWGG 2 cut(s) 663, 1359
EcoT22I ATGCAT 5 cut(s) 343, 490, 2118, 2248, 2574
ErhI CCWWGG 2 cut(s) 663, 1359
FalI AAGNNNNNCTT 4 cut(s) 948, 980, 1785, 1817
FaqI GGGAC 1 cut(s) 874
FauI CCCGC 2 cut(s) 1465, 2053
FauNDI CATATG 3 cut(s) 469, 754, 2034
FbaI TGATCA 1 cut(s) 1489
FblI GTMKAC 1 cut(s) 1918
FokI GGATG 9 cut(s) 119, 160, 219, 1194, 1299, 1979, 2010, 2081, 2165
FspBI CTAG 4 cut(s) 597, 633, 974, 2325
FspI TGCGCA 1 cut(s) 2084
GlaI GCGC 4 cut(s) 10, 1911, 2084, 2319
GsaI CCCAGC 1 cut(s) 1602
HaeII RGCGCY 1 cut(s) 1913
HaeIII GGCC 8 cut(s) 271, 529, 662, 946, 962, 1230, 2001, 2198
HapII CCGG 6 cut(s) 894, 1400, 2066, 2181, 2199, 2424
HgaI GACGC 2 cut(s) 998, 2338
HhaI GCGC 4 cut(s) 11, 1912, 2085, 2320
Hin6I GCGC 4 cut(s) 9, 1910, 2083, 2318
HinP1I GCGC 4 cut(s) 9, 1910, 2083, 2318
HincII GTYRAC 3 cut(s) 334, 1867, 2164
HindII GTYRAC 3 cut(s) 334, 1867, 2164
HindIII AAGCTT 3 cut(s) 375, 1574, 1881
HinfI GANTC 8 cut(s) 460, 614, 696, 794, 933, 1711, 2145, 2418
HpaI GTTAAC 2 cut(s) 334, 1867
HpaII CCGG 6 cut(s) 894, 1400, 2066, 2181, 2199, 2424
HphI GGTGA 5 cut(s) 1678, 2305, 2413, 2449, 2469
Hpy166II GTNNAC 6 cut(s) 100, 334, 1867, 1919, 2164, 2477
Hpy8I GTNNAC 6 cut(s) 100, 334, 1867, 1919, 2164, 2477
Hpy99I CGWCG 2 cut(s) 353, 553
HpyCH4IV ACGT 4 cut(s) 130, 1943, 2079, 2410
HpyF10VI GCNNNNNNNGC 5 cut(s) 668, 959, 998, 1090, 2315
HpyF3I CTNAG 6 cut(s) 12, 140, 1131, 1847, 1859, 2503
HpySE526I ACGT 4 cut(s) 130, 1943, 2079, 2410
HspAI GCGC 4 cut(s) 9, 1910, 2083, 2318
Kpn2I TCCGGA 3 cut(s) 893, 1399, 2065
Ksp22I TGATCA 1 cut(s) 1489
KspAI GTTAAC 2 cut(s) 334, 1867
Kzo9I GATC 8 cut(s) 44, 62, 397, 517, 599, 1489, 2107, 2201
LmnI GCTCC 2 cut(s) 1161, 2455
Lsp1109I GCAGC 9 cut(s) 592, 937, 1447, 2044, 2206, 2249, 2277, 2445, 2535
LweI GCATC 8 cut(s) 350, 475, 1277, 1683, 2040, 2143, 2233, 2559
MaeI CTAG 4 cut(s) 597, 633, 974, 2325
MaeII ACGT 4 cut(s) 130, 1943, 2079, 2410
MalI GATC 8 cut(s) 46, 64, 399, 519, 601, 1491, 2109, 2203
MboI GATC 8 cut(s) 44, 62, 397, 517, 599, 1489, 2107, 2201
MflI RGATCY 3 cut(s) 44, 2107, 2201
MhlI GDGCHC 1 cut(s) 579
MlsI TGGCCA 1 cut(s) 2001
MluNI TGGCCA 1 cut(s) 2001
MlyI GAGTC 3 cut(s) 623, 2139, 2427
MmeI TCCRAC 2 cut(s) 545, 2497
Mox20I TGGCCA 1 cut(s) 2001
Mph1103I ATGCAT 5 cut(s) 343, 490, 2118, 2248, 2574
MroI TCCGGA 3 cut(s) 893, 1399, 2065
MroXI GAANNNNTTC 2 cut(s) 1262, 2099
MscI TGGCCA 1 cut(s) 2001
MseI TTAA 9 cut(s) 318, 333, 690, 1014, 1061, 1080, 1866, 2249, 2535
MslI CAYNNNNRTG 6 cut(s) 1224, 1358, 1364, 1529, 1634, 1691
Msp20I TGGCCA 1 cut(s) 2001
MspA1I CMGCKG 3 cut(s) 605, 1460, 2057
MspCI CTTAAG 1 cut(s) 1013
MspI CCGG 6 cut(s) 894, 1400, 2066, 2181, 2199, 2424
MspR9I CCNGG 4 cut(s) 219, 1074, 2105, 2182
Mva1269I GAATGC 2 cut(s) 1383, 1570
MvaI CCWGG 3 cut(s) 219, 1074, 2105
MvnI CGCG 2 cut(s) 9, 2318
MwoI GCNNNNNNNGC 5 cut(s) 668, 959, 998, 1090, 2315
NciI CCSGG 1 cut(s) 2182
NcoI CCATGG 1 cut(s) 1359
NdeI CATATG 3 cut(s) 469, 754, 2034
NdeII GATC 8 cut(s) 44, 62, 397, 517, 599, 1489, 2107, 2201
NlaIV GGNNCC 5 cut(s) 243, 661, 945, 2064, 2342
NmuCI GTSAC 5 cut(s) 1513, 1583, 1618, 2311, 2419
NsbI TGCGCA 1 cut(s) 2084
NsiI ATGCAT 5 cut(s) 343, 490, 2118, 2248, 2574
NspI RCATGY 5 cut(s) 293, 1544, 1591, 1836, 1906
NspV TTCGAA 1 cut(s) 797
PaeI GCATGC 1 cut(s) 1544
PaeR7I CTCGAG 1 cut(s) 1664
PagI TCATGA 1 cut(s) 1527
PctI GAATGC 2 cut(s) 1383, 1570
PdmI GAANNNNTTC 2 cut(s) 1262, 2099
PfeI GAWTC 5 cut(s) 460, 696, 794, 933, 1711
PflMI CCANNNNNTGG 2 cut(s) 1730, 2008
PfoI TCCNGGA 1 cut(s) 2103
PinAI ACCGGT 1 cut(s) 2423
PleI GAGTC 3 cut(s) 622, 2139, 2426
PpsI GAGTC 3 cut(s) 622, 2139, 2426
PpuMI RGGWCCY 1 cut(s) 851
Psp5II RGGWCCY 1 cut(s) 851
Psp6I CCWGG 3 cut(s) 217, 1072, 2103
PspFI CCCAGC 1 cut(s) 1598
PspGI CCWGG 3 cut(s) 217, 1072, 2103
PspN4I GGNNCC 5 cut(s) 243, 661, 945, 2064, 2342
PspPI GGNCC 5 cut(s) 660, 851, 944, 961, 2063
PspPPI RGGWCCY 1 cut(s) 851
PstI CTGCAG 3 cut(s) 2267, 2311, 2553
PstNI CAGNNNCTG 3 cut(s) 863, 1679, 2271
PsuI RGATCY 3 cut(s) 44, 2107, 2201
PvuII CAGCTG 2 cut(s) 605, 2057
RsaI GTAC 8 cut(s) 37, 101, 628, 1315, 1370, 1501, 1852, 2428
RsaNI GTAC 8 cut(s) 36, 100, 627, 1314, 1369, 1500, 1851, 2427
RseI CAYNNNNRTG 6 cut(s) 1224, 1358, 1364, 1529, 1634, 1691
SaqAI TTAA 9 cut(s) 318, 333, 690, 1014, 1061, 1080, 1866, 2249, 2535
Sau3AI GATC 8 cut(s) 44, 62, 397, 517, 599, 1489, 2107, 2201
Sau96I GGNCC 5 cut(s) 660, 851, 944, 961, 2063
SchI GAGTC 3 cut(s) 623, 2139, 2427
ScrFI CCNGG 4 cut(s) 219, 1074, 2105, 2182
SduI GDGCHC 1 cut(s) 579
SfaNI GCATC 8 cut(s) 350, 475, 1277, 1683, 2040, 2143, 2233, 2559
SfcI CTRYAG 3 cut(s) 2263, 2307, 2549
Sfr274I CTCGAG 1 cut(s) 1664
SfuI TTCGAA 1 cut(s) 797
SinI GGWCC 2 cut(s) 851, 2063
SlaI CTCGAG 1 cut(s) 1664
SmiMI CAYNNNNRTG 6 cut(s) 1224, 1358, 1364, 1529, 1634, 1691
SmlI CTYRAG 4 cut(s) 1013, 1664, 1951, 2045
SmoI CTYRAG 4 cut(s) 1013, 1664, 1951, 2045
SphI GCATGC 1 cut(s) 1544
SsiI CCGC 7 cut(s) 314, 816, 1458, 2060, 2156, 2316, 2523
SspMI CTAG 4 cut(s) 597, 633, 974, 2325
StyD4I CCNGG 4 cut(s) 217, 1072, 2103, 2180
StyI CCWWGG 2 cut(s) 663, 1359
TaiI ACGT 4 cut(s) 133, 1946, 2082, 2413
TaqI TCGA 8 cut(s) 65, 125, 449, 551, 655, 797, 1161, 1665
TaqII GACCGA 2 cut(s) 1112, 1962
TatI WGTACW 2 cut(s) 35, 99
TauI GCSGC 1 cut(s) 316
TfiI GAWTC 5 cut(s) 460, 696, 794, 933, 1711
Tru1I TTAA 9 cut(s) 318, 333, 690, 1014, 1061, 1080, 1866, 2249, 2535
Tru9I TTAA 9 cut(s) 318, 333, 690, 1014, 1061, 1080, 1866, 2249, 2535
TscAI CASTG 4 cut(s) 243, 840, 1423, 1658
TseFI GTSAC 5 cut(s) 1513, 1583, 1618, 2311, 2419
TseI GCWGC 9 cut(s) 605, 950, 1460, 2057, 2219, 2262, 2265, 2458, 2548
Tsp45I GTSAC 5 cut(s) 1513, 1583, 1618, 2311, 2419
TspDTI ATGAA 7 cut(s) 126, 456, 860, 1037, 1271, 1319, 1793
TspGWI ACGGA 4 cut(s) 319, 1979, 2333, 2504
TspRI CASTG 4 cut(s) 243, 840, 1423, 1658
Van91I CCANNNNNTGG 2 cut(s) 1730, 2008
Vha464I CTTAAG 1 cut(s) 1013
VpaK11BI GGWCC 2 cut(s) 851, 2063
XagI CCTNNNNNAGG 1 cut(s) 1858
XapI RAATTY 4 cut(s) 88, 430, 588, 712
XceI RCATGY 5 cut(s) 293, 1544, 1591, 1836, 1906
XhoI CTCGAG 1 cut(s) 1664
XmiI GTMKAC 1 cut(s) 1918
XmnI GAANNNNTTC 2 cut(s) 1262, 2099
XspI CTAG 4 cut(s) 597, 633, 974, 2325
Zsp2I ATGCAT 5 cut(s) 343, 490, 2118, 2248, 2574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.