Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0005339

Physical Location & Seq

Genomic Coordinates Reverse (-)

15339251 .. 15344094

Gene Structure 4844 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G184700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGTTGCGAGCAAAGCACATAAGTAATCTTTCAAGCAGTGCAAGGTCATTTTTCCTTAATGGGCCACGATGTAGTGCAACAGAAGGAAGTTCATGCACTTGCTCTGAAGATGAAACTTGTGTTTCGCAAAGGCAGCAAACAAGAAATGGAGGGCCACTTGCCCAAACTCCATCCACCATGGTATCCAAACCTTCAGCAGGGGCAGGAACCATCATCACTGGAGATGCAGTAAAAGTGGCAAGTTCTCATAAAGCTGAGAGTGTTGAGCACACAACTAATATTAAACAGGTTACAACTGCCCCAAGATCTTTTGGGAGATCAGCGACTGTAACTTATTCTAGTAGCACGGATGCGGTACACTCATCACCTCTTGTTGTAGACCAGTTTGCTAGGGCTGGAGTTGCAGCTGTAAATTTTCTGTCTGATATAGTAAATGGTAAGCTTCCTTTATCAGATGGGCTTGGATTGCTTAACTTGCCACAGAACTGTATGGTTGATCCCACGAGGCCCCTCTCCAGTATCAAGCCCTCACATGTGAAACAAATAAAAAGAGAGCATTTCATTAGTGTTCATCCAAAACCATCTACTGAGACAGCAGCTGCTTCAAAGCATACAAGTAATAATCATGGTTCAAAGGGCAAAGGAGAGAAACCCAGTTTCGTTAAAGGTCTAAATCATGTTCCATACACTAGGAAGGAAAACTCAGTGGTGGCTCACACCGCATCTTCTGACACTTTTGATAAAAGGTCTATGCCACGGAAATCAAAAGGGCATTCAAACAACTTCATTCCAAATTACAGTTCCAATGTGCAGACTTCTGATGCAGAGAGTATGGGTCGTGTCACTAAAGGTTTTAATAGACCTACAAGAGATATGAAAATGCCAACAGGGATAACTCCAATCAACAGACAGTTTGTGCATACTGGGAATGTTGTTCAAAATGTATCTCACATACTGCAACAGATGAGATGGGGTCCTGCTGCAGAGGCGGCTCTTTTAAATCTCAACTGTTCAATGGATGCATATCAAGCAAACCAAATCTTAAAGCAACTTCAAGATCATTCTGTTGCTCTGAGCTTTTTTTATTGGCTAAAGAGGCAGGCAGGATTCAAGCATGATGGGCACACTTATACCACCATGGTTGGCATCCTTGGTCGTTCCAGGCAGTTTGGTGCCATTAACAAATTGCTTAATCAGATGGTGAAAGAAGGATGCCAGCCAAATGTTGTGACATATAACCGGCTGATTCATAGTTATGGTCGTGCAAACTATTTGAAAGAAGCAATGAATGTGTTCAACCAAATGCAAGAAGCAGGGTGTGAACCTGACCGTGTCACGTACTGCACACTAATTGACATCCATGCAAAAGCTGGGTTTCTTGATGTTGCTCTACGACTGTATGATGGGATGCAAGAGGCTGGTCTTTCTCCTGACACATTCACTTACAGTGTAATGATCAACTGTCTCGGAAAAGCTGGCCATTTAGCTGCTGCTCACCGTCTGTTCTGTGAGATGGTTAATCAGGGTTGTGTTCCTAATTTGGTCACGTATAATATCATGATAGCTTTGCAGGCCAAAGCAAGGAATTATGAGACTGCTTTAAAGCTCTACCGTGACATGCAAGGTGCTGGATTTGAACCAGATAAAGTAACTTATAGCATAGTAATGGAGGTGCTTGGCCATTGTGGGTATCTTGAGGAAGCAGAGGCGATTTTTGGTGAAATGAAACGGAAGAACTGGGTACCTGATGAACCTGTTTATGGTCTTTTGGTAGATTTGTGGGGTAAGGCGGGTAACGTCGGAAAAGCCTGGAATTGGTATCAAGCAATGCTCCATGCGGGTTTACGGCCTAATGTTCCTACTTGCAATTCTCTGCTCAGTGCTTTTCTTAGGGTGCACCAGCTGTCTGATGCTTATAACTTGCTACAGAGCATGATGGGTTTAGGTCTGAACCCTTCTCTGCAGACATATACCTTGCTTCTCAGTTGTTGCACAGAAGCACGGTCACCATATGACATGGACTTTTGTTGTGAGCTTATGGCAGTTACAGGCCATCCTGCACACACATTCCTACTGTCTATGCCATCGGCGGGACCTGATGGTCAAAATGTGCGAGAGCACATGAGCAGGTTCTTGGATCTGATGCATAGTGAGGATAGAGAAAGCAAGAGGGGGCTTGTAGATGCAGTAGTGGATTTTCTTCACAAGTCAGGGCTAAAGGAGGAGGCTGGTTCAGTCTGGGAGGTGGCTGCACAAAAGAATGTTTATCCGGATGCCATTAGAGAGAAAAGCTCATGTTATTGGCTTATAAACCTGCATGTTATGTCTGATGGTACTGCCGTGACAGCGCTATCCAGGACACTTGCTTGGTTTCGCCAACAAATGCTAATATCTGGGATTTGTCCAAGCCGAATTGATATTGTGACTGGATGGGGCCGGCGGAGCAGGGTGACAGGATCTTCTTTGGTGAGGCAGGCAGTGGAAGAACTACTTAATATGTTTAGCTTTCCATTCTTCACTGAAAATGGCAATTCTGGGTGTTTTGTAGGATGTGGGGAGCCTCTTAATAAATGGTTGCTCCAATCTTATGTGGAGCGAATGCATTTATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

871

Amino Acids

95.98

Weight (kDa)

8.83

Isoelectric Point (pI)

39.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18900 AT1G18900 AT1G18900 AT1G18900
fragaria_vesca	FvH4_5g15730 FvH4_5g15730 FvH4_5g15730
malus_domestica	MD06G1185900.v1.1 MD14G1192100.v1.1
prunus_persica	Prupe.5G184700_v2.0.a1 Prupe.5G184700_v2.0.a1 Prupe.5G184700_v2.0.a1 Prupe.5G184700_v2.0.a1 Prupe.5G184700_v2.0.a1
pyrus_communis	pycom06g16530 pycom14g15980
rosa_chinensis	RchiOBHm_Chr7g0180381
rosa_laevigata	RLG00000005272
rosa_multiflora	Rmu_sc0003526.1_g000009
rosa_roxburghii	Rroxscaffold_3G00272940
rosa_rugosa	Rorug06G0432600 Rorug06G0432700 Rorug06G0432800 Rorug06G0432800
rosa_samantha	Rh7AG033200 Rh7BG033100 Rh7CG035000 Rh7DG033600
rosa_wichuraiana	Rw7G002770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1917, 2309
AasI	GACNNNNNNGTC	1 cut(s)	2100
Acc36I	ACCTGC	2 cut(s)	2118, 2322
Acc65I	GGTACC	1 cut(s)	1741
AccB1I	GGYRCC	2 cut(s)	1172, 1741
AccI	GTMKAC	1 cut(s)	378
AccIII	TCCGGA	1 cut(s)	2269
AciI	CCGC	7 cut(s)	353, 720, 989, 1790, 1838, 2090, 2440
AclWI	GGATC	3 cut(s)	491, 2145, 2464
AcoI	YGGCCR	2 cut(s)	1477, 1678
AcsI	RAATTY	1 cut(s)	412
AcuI	CTGAAG	2 cut(s)	126, 177
AfaI	GTAC	4 cut(s)	357, 1340, 1743, 2335
AfeI	AGCGCT	1 cut(s)	2349
AfiI	CCNNNNNNNGG	5 cut(s)	197, 1581, 1760, 1815, 2090
AflIII	ACRYGT	1 cut(s)	532
AjnI	CCWGG	3 cut(s)	1160, 1808, 2354
AjuI	GAANNNNNNNTTGG	2 cut(s)	784, 816
Alw21I	GWGCWC	3 cut(s)	270, 1899, 2121
Alw26I	GTCTC	3 cut(s)	584, 1469, 1586
Alw44I	GTGCAC	1 cut(s)	1895
AlwI	GGATC	3 cut(s)	491, 2145, 2464
AlwNI	CAGNNNCTG	2 cut(s)	326, 599
Aor13HI	TCCGGA	1 cut(s)	2269
Aor51HI	AGCGCT	1 cut(s)	2349
AoxI	GGCC	9 cut(s)	62, 152, 506, 1477, 1572, 1678, 1847, 2050, 2434
ApaLI	GTGCAC	1 cut(s)	1895
ApeKI	GCWGC	8 cut(s)	133, 404, 596, 599, 980, 1487, 1490, 2249
ApoI	RAATTY	1 cut(s)	412
Asp700I	GAANNNNTTC	1 cut(s)	1292
Asp718I	GGTACC	1 cut(s)	1741
AspLEI	GCGC	1 cut(s)	2350
AspS9I	GGNCC	6 cut(s)	62, 152, 507, 974, 2093, 2434
AsuHPI	GGTGA	7 cut(s)	357, 1213, 1487, 1730, 1998, 2461, 2479
AvaII	GGWCC	2 cut(s)	974, 2093
BaeGI	GKGCMC	2 cut(s)	1125, 1899
BaeI	ACNNNNGTAYC	4 cut(s)	165, 198, 2325, 2358
BalI	TGGCCA	2 cut(s)	1479, 1680
BanI	GGYRCC	2 cut(s)	1172, 1741
BauI	CACGAG	1 cut(s)	502
Bbv12I	GWGCWC	3 cut(s)	270, 1899, 2121
BbvI	GCAGC	8 cut(s)	145, 416, 586, 608, 967, 1474, 1477, 2236
BceAI	ACGGC	2 cut(s)	1862, 2324
BciT130I	CCWGG	3 cut(s)	1162, 1810, 2356
BciVI	GTATCC	1 cut(s)	193
BclI	TGATCA	1 cut(s)	1455
BcoDI	GTCTC	3 cut(s)	584, 1469, 1586
BfaI	CTAG	3 cut(s)	339, 390, 690
BfmI	CTRYAG	3 cut(s)	981, 1925, 1961
BfoI	RGCGCY	1 cut(s)	2351
BfuAI	ACCTGC	2 cut(s)	2118, 2322
BfuI	GTATCC	1 cut(s)	193
BglII	AGATCT	1 cut(s)	305
BisI	GCNGC	9 cut(s)	134, 405, 597, 600, 981, 990, 1488, 1491, 2250
BlsI	GCNGC	9 cut(s)	135, 406, 598, 601, 982, 991, 1489, 1492, 2251
Bme1390I	CCNGG	3 cut(s)	1162, 1810, 2356
Bme18I	GGWCC	2 cut(s)	974, 2093
BmgT120I	GGNCC	6 cut(s)	62, 152, 507, 974, 2093, 2434
BmiI	GGNNCC	8 cut(s)	208, 509, 975, 1174, 1743, 2094, 2435, 2559
BmrFI	CCNGG	3 cut(s)	1162, 1810, 2356
BmrI	ACTGGG	3 cut(s)	648, 933, 1747
BmuI	ACTGGG	3 cut(s)	648, 933, 1747
BplI	GAGNNNNNCTC	2 cut(s)	2276, 2308
BpmI	CTGGAG	3 cut(s)	240, 417, 499
BpuEI	CTTGAG	1 cut(s)	1715
BsaAI	YACGTR	2 cut(s)	1338, 1548
BsaBI	GATNNNNATC	1 cut(s)	1023
BsaJI	CCNNGG	4 cut(s)	177, 755, 1137, 1150
BsaWI	WCCGGW	1 cut(s)	2269
BsaXI	ACNNNNNCTCC	2 cut(s)	213, 243
Bsc4I	CCNNNNNNNGG	5 cut(s)	197, 1581, 1760, 1815, 2090
Bse118I	RCCGGY	2 cut(s)	1239, 2436
Bse1I	ACTGG	7 cut(s)	223, 382, 516, 654, 928, 1742, 2431
Bse3DI	GCAATG	2 cut(s)	1290, 1833
Bse8I	GATNNNNATC	1 cut(s)	1023
BseAI	TCCGGA	1 cut(s)	2269
BseBI	CCWGG	3 cut(s)	1162, 1810, 2356
BseDI	CCNNGG	4 cut(s)	177, 755, 1137, 1150
BseJI	GATNNNNATC	1 cut(s)	1023
BseLI	CCNNNNNNNGG	5 cut(s)	197, 1581, 1760, 1815, 2090
BseMI	GCAATG	2 cut(s)	1290, 1833
BseMII	CTCAG	6 cut(s)	246, 579, 717, 1064, 1891, 1996
BseNI	ACTGG	7 cut(s)	223, 382, 516, 654, 928, 1742, 2431
BseRI	GAGGAG	1 cut(s)	2237
BseSI	GKGCMC	2 cut(s)	1125, 1899
BseXI	GCAGC	8 cut(s)	145, 416, 586, 608, 967, 1474, 1477, 2236
BseYI	CCCAGC	1 cut(s)	1370
BsgI	GTGCAG	4 cut(s)	830, 1327, 2043, 2235
BshFI	GGCC	9 cut(s)	64, 154, 508, 1479, 1574, 1680, 1849, 2052, 2436
BshNI	GGYRCC	2 cut(s)	1172, 1741
BsiHKAI	GWGCWC	3 cut(s)	270, 1899, 2121
BsiSI	CCGG	3 cut(s)	1240, 2270, 2437
BslFI	GGGAC	1 cut(s)	2106
BslI	CCNNNNNNNGG	5 cut(s)	197, 1581, 1760, 1815, 2090
BsmAI	GTCTC	3 cut(s)	584, 1469, 1586
BsmFI	GGGAC	1 cut(s)	2106
BsmI	GAATGC	2 cut(s)	772, 2604
BsnI	GGCC	9 cut(s)	64, 154, 508, 1479, 1574, 1680, 1849, 2052, 2436
Bsp1286I	GDGCHC	4 cut(s)	270, 1125, 1899, 2121
Bsp13I	TCCGGA	1 cut(s)	2269
Bsp143I	GATC	7 cut(s)	305, 317, 496, 1057, 1455, 2137, 2456
Bsp19I	CCATGG	2 cut(s)	177, 1137
BspACI	CCGC	7 cut(s)	353, 720, 989, 1790, 1838, 2090, 2440
BspANI	GGCC	9 cut(s)	64, 154, 508, 1479, 1574, 1680, 1849, 2052, 2436
BspCNI	CTCAG	6 cut(s)	247, 580, 716, 1065, 1890, 1995
BspEI	TCCGGA	1 cut(s)	2269
BspHI	TCATGA	1 cut(s)	1557
BspLI	GGNNCC	8 cut(s)	208, 509, 975, 1174, 1743, 2094, 2435, 2559
BspMAI	CTGCAG	2 cut(s)	985, 1965
BspMI	ACCTGC	2 cut(s)	2118, 2322
BspPI	GGATC	3 cut(s)	491, 2145, 2464
BspT107I	GGYRCC	2 cut(s)	1172, 1741
BsrDI	GCAATG	2 cut(s)	1290, 1833
BsrFI	RCCGGY	2 cut(s)	1239, 2436
BsrI	ACTGG	7 cut(s)	223, 382, 516, 654, 928, 1742, 2431
BssAI	RCCGGY	2 cut(s)	1239, 2436
BssECI	CCNNGG	4 cut(s)	177, 755, 1137, 1150
BssMI	GATC	7 cut(s)	305, 317, 496, 1057, 1455, 2137, 2456
BssSI	CACGAG	1 cut(s)	502
BssT1I	CCWWGG	3 cut(s)	177, 1137, 1150
Bst2BI	CACGAG	1 cut(s)	502
Bst2UI	CCWGG	3 cut(s)	1162, 1810, 2356
BstBAI	YACGTR	2 cut(s)	1338, 1548
BstC8I	GCNNGC	7 cut(s)	9, 1101, 1217, 1477, 1572, 2438, 2475
BstDEI	CTNAG	7 cut(s)	255, 588, 703, 1073, 1877, 1889, 1982
BstDSI	CCRYGG	3 cut(s)	177, 755, 1137
BstEII	GGTNACC	1 cut(s)	2004
BstENI	CCTNNNNNAGG	1 cut(s)	195
BstH2I	RGCGCY	1 cut(s)	2351
BstHHI	GCGC	1 cut(s)	2350
BstKTI	GATC	7 cut(s)	308, 320, 499, 1060, 1458, 2140, 2459
BstMAI	GTCTC	3 cut(s)	584, 1469, 1586
BstMBI	GATC	7 cut(s)	305, 317, 496, 1057, 1455, 2137, 2456
BstNI	CCWGG	3 cut(s)	1162, 1810, 2356
BstNSI	RCATGY	3 cut(s)	536, 1621, 2321
BstPI	GGTNACC	1 cut(s)	2004
BstSCI	CCNGG	3 cut(s)	1160, 1808, 2354
BstSFI	CTRYAG	3 cut(s)	981, 1925, 1961
BstSLI	GKGCMC	2 cut(s)	1125, 1899
BstV1I	GCAGC	8 cut(s)	145, 416, 586, 608, 967, 1474, 1477, 2236
BstX2I	RGATCY	3 cut(s)	305, 2137, 2456
BstYI	RGATCY	3 cut(s)	305, 2137, 2456
BsuI	GTATCC	1 cut(s)	193
BsuRI	GGCC	9 cut(s)	64, 154, 508, 1479, 1574, 1680, 1849, 2052, 2436
BtgI	CCRYGG	3 cut(s)	177, 755, 1137
BtsI	GCAGTG	2 cut(s)	43, 2484
BtsIMutI	CAGTG	7 cut(s)	43, 216, 711, 1453, 1885, 2484, 2517
BveI	ACCTGC	2 cut(s)	2118, 2322
Cac8I	GCNNGC	7 cut(s)	9, 1101, 1217, 1477, 1572, 2438, 2475
CaiI	CAGNNNCTG	2 cut(s)	326, 599
CciI	TCATGA	1 cut(s)	1557
CfoI	GCGC	1 cut(s)	2350
Cfr10I	RCCGGY	2 cut(s)	1239, 2436
Cfr13I	GGNCC	6 cut(s)	62, 152, 507, 974, 2093, 2434
Csp6I	GTAC	4 cut(s)	356, 1339, 1742, 2334
CspCI	CAANNNNNGTGG	2 cut(s)	1123, 1158
CviQI	GTAC	4 cut(s)	356, 1339, 1742, 2334
DdeI	CTNAG	7 cut(s)	255, 588, 703, 1073, 1877, 1889, 1982
DpnI	GATC	7 cut(s)	307, 319, 498, 1059, 1457, 2139, 2458
DpnII	GATC	7 cut(s)	305, 317, 496, 1057, 1455, 2137, 2456
DraI	TTTAAA	2 cut(s)	999, 1602
DrdI	GACNNNNNNGTC	1 cut(s)	2100
DseDI	GACNNNNNNGTC	1 cut(s)	2100
EaeI	YGGCCR	2 cut(s)	1477, 1678
EciI	GGCGGA	1 cut(s)	2455
Eco130I	CCWWGG	3 cut(s)	177, 1137, 1150
Eco47I	GGWCC	2 cut(s)	974, 2093
Eco47III	AGCGCT	1 cut(s)	2349
Eco57I	CTGAAG	2 cut(s)	126, 177
Eco91I	GGTNACC	1 cut(s)	2004
EcoNI	CCTNNNNNAGG	1 cut(s)	195
EcoO109I	RGGNCCY	3 cut(s)	507, 974, 2093
EcoO65I	GGTNACC	1 cut(s)	2004
EcoRII	CCWGG	3 cut(s)	1160, 1808, 2354
EcoT14I	CCWWGG	3 cut(s)	177, 1137, 1150
EcoT22I	ATGCAT	3 cut(s)	1024, 2148, 2604
ErhI	CCWWGG	3 cut(s)	177, 1137, 1150
FalI	AAGNNNNNCTT	2 cut(s)	2475, 2507
FaqI	GGGAC	1 cut(s)	2106
FauI	CCCGC	3 cut(s)	1783, 1831, 2083
FauNDI	CATATG	1 cut(s)	2011
FbaI	TGATCA	1 cut(s)	1455
FblI	GTMKAC	1 cut(s)	378
Fnu4HI	GCNGC	9 cut(s)	134, 405, 597, 600, 981, 990, 1488, 1491, 2250
Fsp4HI	GCNGC	9 cut(s)	134, 405, 597, 600, 981, 990, 1488, 1491, 2250
FspBI	CTAG	3 cut(s)	339, 390, 690
GlaI	GCGC	1 cut(s)	2349
GluI	GCNGC	9 cut(s)	134, 405, 597, 600, 981, 990, 1488, 1491, 2250
GsaI	CCCAGC	1 cut(s)	1374
GsuI	CTGGAG	3 cut(s)	240, 417, 499
HaeII	RGCGCY	1 cut(s)	2351
HaeIII	GGCC	9 cut(s)	64, 154, 508, 1479, 1574, 1680, 1849, 2052, 2436
HapII	CCGG	3 cut(s)	1240, 2270, 2437
HhaI	GCGC	1 cut(s)	2350
Hin6I	GCGC	1 cut(s)	2348
HinP1I	GCGC	1 cut(s)	2348
HindIII	AAGCTT	1 cut(s)	440
HinfI	GANTC	2 cut(s)	1107, 1246
HpaII	CCGG	3 cut(s)	1240, 2270, 2437
HphI	GGTGA	7 cut(s)	357, 1213, 1487, 1730, 1998, 2461, 2479
Hpy166II	GTNNAC	5 cut(s)	358, 379, 1322, 1844, 1897
Hpy188III	TCNNGA	6 cut(s)	1055, 1379, 1430, 1558, 1694, 2270
Hpy8I	GTNNAC	5 cut(s)	358, 379, 1322, 1844, 1897
Hpy99I	CGWCG	1 cut(s)	1802
HpyAV	CCTTC	5 cut(s)	77, 201, 688, 1202, 1965
HpyCH4IV	ACGT	3 cut(s)	1337, 1547, 1797
HpyF3I	CTNAG	7 cut(s)	255, 588, 703, 1073, 1877, 1889, 1982
HpySE526I	ACGT	3 cut(s)	1337, 1547, 1797
HspAI	GCGC	1 cut(s)	2348
Kpn2I	TCCGGA	1 cut(s)	2269
KpnI	GGTACC	1 cut(s)	1745
KroI	GCCGGC	1 cut(s)	2436
KroNI	GCCGGC	1 cut(s)	2438
Ksp22I	TGATCA	1 cut(s)	1455
Kzo9I	GATC	7 cut(s)	305, 317, 496, 1057, 1455, 2137, 2456
LmnI	GCTCC	5 cut(s)	1836, 2442, 2557, 2583, 2593
Lsp1109I	GCAGC	8 cut(s)	145, 416, 586, 608, 967, 1474, 1477, 2236
MaeI	CTAG	3 cut(s)	339, 390, 690
MaeII	ACGT	3 cut(s)	1337, 1547, 1797
MalI	GATC	7 cut(s)	307, 319, 498, 1059, 1457, 2139, 2458
MboI	GATC	7 cut(s)	305, 317, 496, 1057, 1455, 2137, 2456
MboII	GAAGA	7 cut(s)	119, 717, 1744, 2192, 2451, 2495, 2506
MflI	RGATCY	3 cut(s)	305, 2137, 2456
MhlI	GDGCHC	4 cut(s)	270, 1125, 1899, 2121
MlsI	TGGCCA	2 cut(s)	1479, 1680
MluNI	TGGCCA	2 cut(s)	1479, 1680
MmeI	TCCRAC	1 cut(s)	1780
Mox20I	TGGCCA	2 cut(s)	1479, 1680
Mph1103I	ATGCAT	3 cut(s)	1024, 2148, 2604
MroI	TCCGGA	1 cut(s)	2269
MroNI	GCCGGC	1 cut(s)	2436
MroXI	GAANNNNTTC	1 cut(s)	1292
MscI	TGGCCA	2 cut(s)	1479, 1680
MslI	CAYNNNNRTG	2 cut(s)	1254, 1664
Msp20I	TGGCCA	2 cut(s)	1479, 1680
MspA1I	CMGCKG	3 cut(s)	407, 599, 1903
MspI	CCGG	3 cut(s)	1240, 2270, 2437
MspR9I	CCNGG	3 cut(s)	1162, 1810, 2356
Mva1269I	GAATGC	2 cut(s)	772, 2604
MvaI	CCWGG	3 cut(s)	1162, 1810, 2356
NaeI	GCCGGC	1 cut(s)	2438
NcoI	CCATGG	2 cut(s)	177, 1137
NdeI	CATATG	1 cut(s)	2011
NdeII	GATC	7 cut(s)	305, 317, 496, 1057, 1455, 2137, 2456
NgoMIV	GCCGGC	1 cut(s)	2436
NlaIV	GGNNCC	8 cut(s)	208, 509, 975, 1174, 1743, 2094, 2435, 2559
NmuCI	GTSAC	9 cut(s)	841, 1228, 1333, 1543, 1613, 2004, 2341, 2422, 2449
NsiI	ATGCAT	3 cut(s)	1024, 2148, 2604
NspI	RCATGY	3 cut(s)	536, 1621, 2321
PagI	TCATGA	1 cut(s)	1557
PciI	ACATGT	1 cut(s)	532
PctI	GAATGC	2 cut(s)	772, 2604
PdiI	GCCGGC	1 cut(s)	2438
PdmI	GAANNNNTTC	1 cut(s)	1292
PfeI	GAWTC	2 cut(s)	1107, 1246
PflFI	GACNNNGTC	1 cut(s)	1331
PfoI	TCCNGGA	1 cut(s)	2354
PkrI	GCNGC	9 cut(s)	135, 406, 598, 601, 982, 991, 1489, 1492, 2251
Ppu21I	YACGTR	2 cut(s)	1338, 1548
PpuMI	RGGWCCY	2 cut(s)	974, 2093
PscI	ACATGT	1 cut(s)	532
PsiI	TTATAA	2 cut(s)	1917, 2309
Psp5II	RGGWCCY	2 cut(s)	974, 2093
Psp6I	CCWGG	3 cut(s)	1160, 1808, 2354
PspEI	GGTNACC	1 cut(s)	2004
PspFI	CCCAGC	1 cut(s)	1370
PspGI	CCWGG	3 cut(s)	1160, 1808, 2354
PspN4I	GGNNCC	8 cut(s)	208, 509, 975, 1174, 1743, 2094, 2435, 2559
PspPI	GGNCC	6 cut(s)	62, 152, 507, 974, 2093, 2434
PspPPI	RGGWCCY	2 cut(s)	974, 2093
PstI	CTGCAG	2 cut(s)	985, 1965
PstNI	CAGNNNCTG	2 cut(s)	326, 599
PsuI	RGATCY	3 cut(s)	305, 2137, 2456
PsyI	GACNNNGTC	1 cut(s)	1331
PvuII	CAGCTG	3 cut(s)	407, 599, 1903
RsaI	GTAC	4 cut(s)	357, 1340, 1743, 2335
RsaNI	GTAC	4 cut(s)	356, 1339, 1742, 2334
RseI	CAYNNNNRTG	2 cut(s)	1254, 1664
SatI	GCNGC	9 cut(s)	134, 405, 597, 600, 981, 990, 1488, 1491, 2250
Sau3AI	GATC	7 cut(s)	305, 317, 496, 1057, 1455, 2137, 2456
Sau96I	GGNCC	6 cut(s)	62, 152, 507, 974, 2093, 2434
ScrFI	CCNGG	3 cut(s)	1162, 1810, 2356
SduI	GDGCHC	4 cut(s)	270, 1125, 1899, 2121
SfcI	CTRYAG	3 cut(s)	981, 1925, 1961
SinI	GGWCC	2 cut(s)	974, 2093
SmiMI	CAYNNNNRTG	2 cut(s)	1254, 1664
SmlI	CTYRAG	1 cut(s)	1694
SmoI	CTYRAG	1 cut(s)	1694
SsiI	CCGC	7 cut(s)	353, 720, 989, 1790, 1838, 2090, 2440
SspI	AATATT	1 cut(s)	280
SspMI	CTAG	3 cut(s)	339, 390, 690
StyD4I	CCNGG	3 cut(s)	1160, 1808, 2354
StyI	CCWWGG	3 cut(s)	177, 1137, 1150
TaiI	ACGT	3 cut(s)	1340, 1550, 1800
TauI	GCSGC	1 cut(s)	992
TfiI	GAWTC	2 cut(s)	1107, 1246
TscAI	CASTG	7 cut(s)	43, 223, 711, 1453, 1885, 2484, 2524
TseFI	GTSAC	9 cut(s)	841, 1228, 1333, 1543, 1613, 2004, 2341, 2422, 2449
TseI	GCWGC	8 cut(s)	133, 404, 596, 599, 980, 1487, 1490, 2249
Tsp45I	GTSAC	9 cut(s)	841, 1228, 1333, 1543, 1613, 2004, 2341, 2422, 2449
TspGWI	ACGGA	3 cut(s)	362, 772, 1744
TspRI	CASTG	7 cut(s)	43, 223, 711, 1453, 1885, 2484, 2524
Tth111I	GACNNNGTC	1 cut(s)	1331
VneI	GTGCAC	1 cut(s)	1895
VpaK11BI	GGWCC	2 cut(s)	974, 2093
XagI	CCTNNNNNAGG	1 cut(s)	195
XapI	RAATTY	1 cut(s)	412
XceI	RCATGY	3 cut(s)	536, 1621, 2321
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1367
XmiI	GTMKAC	1 cut(s)	378
XmnI	GAANNNNTTC	1 cut(s)	1292
XspI	CTAG	3 cut(s)	339, 390, 690
Zsp2I	ATGCAT	3 cut(s)	1024, 2148, 2604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.