AT1G21750

protein disulfide isomerase-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
7645610 .. 7648855
3246 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G21750.1

Sequence Viewer

Length: 1506 bp
ATGGCGATGAGGGGCTTCACGTTGTTTTCGATCCTTGTGTTGTCTTTGTGCGCTTCGTCTATCAGAAGCGAAGAGACGGAGACGAAGGAGTTCGTGTTGACCTTGGATCACACTAACTTCACCGATACCATCAACAAACACGATTTCATCGTCGTCGAGTTCTACGCCCCATGGTGTGGACACTGCAAGCAGCTTGCTCCTGAGTATGAGAAGGCTGCGTCAGCTTTGAGCAGTAACGTCCCACCAGTGGTTCTTGCTAAGATTGATGCCAGTGAGGAAACAAACAGAGAATTTGCAACTCAATACGAGGTTCAGGGTTTCCCAACAATCAAGATTTTCAGAAACGGAGGAAAGGCTGTTCAAGAATACAACGGACCTCGTGAAGCTGAGGGTATTGTTACTTACTTGAAGAAACAAAGTGGACCTGCTTCTGCTGAAATTAAGTCAGCTGATGATGCTTCTGAGGTTGTTAGTGACAAGAAGGTTGTTGTGGTTGGGATTTTCCCTAAACTATCTGGCTCCGAGTTTGATTCTTTCATGGCCATTGCTGAGAAATTGCGCTCTGAGTTAGATTTCGCACATACCTCGGATGCCAAGCTTCTTCCCCGTGGAGAGTCATCTGTAACAGGACCTGTGGTCAGGCTATTCAAACCCTTTGATGAACAATTTGTTGATTCCAAGGATTTCGATGGTGAAGCTCTGGAGAAATTTGTCAAAGAATCCAGCATTCCACTTATCACCGTCTTTGACAAAGATCCAAACAACCACCCATATGTTATCAAGTTCTTTGAAAGCACTAATACCAAGGCGATGTTGTTCATTAACTTCACTGGAGAAGGAGCTGAGTCTCTTAAATCAAAGTACCGTGAAGTTGCTACATCCAACAAGGGACAGGGTCTTAGCTTCCTTCTAGGTGATGCTGAGAACAGCCAAGGTGCATTCCAGTACTTTGGACTCGAAGAGAGCCAAGTTCCTCTCATCATCATCCAGACTGCTGACGACAAGAAATACCTGAAAACAAATGTTGAGGTTGACCAGATTGAATCATGGGTCAAGGACTTCAAGGATGGAAAAATTGCTCCCCACAAAAAATCTCAACCTATCCCAGCCGAAAACAACGAGCCAGTGAAGGTTGTTGTTTCTGACAGCCTTGACGACATTGTCTTAAACTCTGGAAAGAACGTTTTGCTTGAATTCTATGCTCCATGGTGTGGACACTGCCAAAAGCTTGCTCCAATCTTGGACGAAGTTGCTGTGTCGTACCAAAGCGACTCAAGTGTAGTCATCGCTAAGCTAGATGCAACCGCAAACGACTTCCCAAAAGATACCTTTGATGTGAAGGGATTCCCGACCATTTACTTCAAATCAGCGAGCGGAAACGTTGTGGTTTACGAAGGAGACAGGACAAAGGAAGATTTCATAAGCTTCGTCGACAAGAACAAGGACACAGTTGGAGAGCCTAAGAAGGAGGAAGAGACAACTGAGGAAGTCAAGGATGAGCTCTGA

Protein Analysis

501

Amino Acids

55.6

Weight (kDa)

4.81

Isoelectric Point (pI)

29.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin PF00085 32 - 138 5.7e-30 Thioredoxin
Thioredoxin_2 PF13098 47 - 129 1e-07 Thioredoxin-like domain
Thioredoxin_6 PF13848 168 - 353 7.8e-22 Thioredoxin-like domain
Thioredoxin PF00085 376 - 479 3.1e-24 Thioredoxin
Thioredoxin_2 PF13098 391 - 474 8.3e-06 Thioredoxin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011915)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1160
Acc36I ACCTGC 1 cut(s) 433
AccB7I CCANNNNNTGG 2 cut(s) 176, 1211
AccBSI CCGCTC 1 cut(s) 1374
AccI GTMKAC 1 cut(s) 1431
AciI CCGC 2 cut(s) 1305, 1374
AclI AACGTT 2 cut(s) 1182, 1380
AclWI GGATC 3 cut(s) 25, 114, 749
AcoI YGGCCR 1 cut(s) 540
AcsI RAATTY 3 cut(s) 290, 707, 1193
AfaI GTAC 3 cut(s) 863, 947, 1262
AfiI CCNNNNNNNGG 3 cut(s) 176, 247, 1211
AgsI TTSAA 8 cut(s) 362, 409, 649, 791, 1043, 1063, 1193, 1363
AhdI GACNNNNNGTC 1 cut(s) 635
AloI GAACNNNNNNTCC 2 cut(s) 342, 374
Alw21I GWGCWC 1 cut(s) 1503
Alw26I GTCTC 5 cut(s) 68, 74, 852, 1392, 1469
AlwI GGATC 3 cut(s) 25, 114, 749
AlwNI CAGNNNCTG 1 cut(s) 632
AoxI GGCC 1 cut(s) 540
ApeKI GCWGC 2 cut(s) 190, 215
ApoI RAATTY 3 cut(s) 290, 707, 1193
Asp700I GAANNNNTTC 2 cut(s) 89, 1343
AspLEI GCGC 2 cut(s) 53, 561
AspS9I GGNCC 3 cut(s) 374, 422, 629
AsuHPI GGTGA 4 cut(s) 112, 704, 730, 926
AvaII GGWCC 3 cut(s) 374, 422, 629
BalI TGGCCA 1 cut(s) 542
BanII GRGCYC 1 cut(s) 1503
BauI CACGAG 1 cut(s) 378
Bbv12I GWGCWC 1 cut(s) 1503
BbvCI CCTCAGC 1 cut(s) 387
BbvI GCAGC 2 cut(s) 202, 202
BccI CCATC 3 cut(s) 137, 683, 1061
BcgI CGANNNNNNTGC 2 cut(s) 567, 601
BcoDI GTCTC 5 cut(s) 68, 74, 852, 1392, 1469
BfaI CTAG 2 cut(s) 911, 1295
BfuAI ACCTGC 1 cut(s) 433
BisI GCNGC 2 cut(s) 191, 216
BlpI GCTNAGC 1 cut(s) 1290
BlsI GCNGC 2 cut(s) 192, 217
BmcAI AGTACT 1 cut(s) 947
Bme18I GGWCC 3 cut(s) 374, 422, 629
BmeRI GACNNNNNGTC 1 cut(s) 635
BmgT120I GGNCC 3 cut(s) 374, 422, 629
BmiI GGNNCC 1 cut(s) 520
BmsI GCATC 5 cut(s) 256, 445, 580, 907, 1288
BpmI CTGGAG 2 cut(s) 722, 852
Bpu10I CCTNAGC 1 cut(s) 387
Bpu1102I GCTNAGC 1 cut(s) 1290
BpuEI CTTGAG 1 cut(s) 1258
BsaJI CCNNGG 8 cut(s) 102, 170, 585, 607, 678, 804, 931, 1205
BsaXI ACNNNNNCTCC 2 cut(s) 80, 110
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 247, 1211
Bse1I ACTGG 5 cut(s) 245, 270, 835, 943, 1124
Bse3DI GCAATG 1 cut(s) 543
BseDI CCNNGG 8 cut(s) 102, 170, 585, 607, 678, 804, 931, 1205
BseGI GGATG 5 cut(s) 595, 878, 984, 1072, 1501
BseLI CCNNNNNNNGG 3 cut(s) 176, 247, 1211
BseMI GCAATG 1 cut(s) 543
BseMII CTCAG 8 cut(s) 192, 378, 453, 540, 555, 834, 912, 1473
BseNI ACTGG 5 cut(s) 245, 270, 835, 943, 1124
BseXI GCAGC 2 cut(s) 202, 202
BseYI CCCAGC 1 cut(s) 1105
BshFI GGCC 1 cut(s) 542
BsiHKAI GWGCWC 1 cut(s) 1503
BslFI GGGAC 2 cut(s) 224, 903
BslI CCNNNNNNNGG 3 cut(s) 176, 247, 1211
BsmAI GTCTC 5 cut(s) 68, 74, 852, 1392, 1469
BsmBI CGTCTC 2 cut(s) 68, 74
BsmFI GGGAC 2 cut(s) 224, 903
BsmI GAATGC 2 cut(s) 726, 938
BsnI GGCC 1 cut(s) 542
Bsp1286I GDGCHC 1 cut(s) 1503
Bsp143I GATC 3 cut(s) 30, 106, 754
Bsp1720I GCTNAGC 1 cut(s) 1290
Bsp19I CCATGG 2 cut(s) 170, 1205
BspACI CCGC 2 cut(s) 1305, 1374
BspANI GGCC 1 cut(s) 542
BspCNI CTCAG 8 cut(s) 193, 379, 454, 541, 556, 835, 913, 1474
BspLI GGNNCC 1 cut(s) 520
BspMI ACCTGC 1 cut(s) 433
BspPI GGATC 3 cut(s) 25, 114, 749
BsrBI CCGCTC 1 cut(s) 1374
BsrDI GCAATG 1 cut(s) 543
BsrI ACTGG 5 cut(s) 245, 270, 835, 943, 1124
BssECI CCNNGG 8 cut(s) 102, 170, 585, 607, 678, 804, 931, 1205
BssMI GATC 3 cut(s) 30, 106, 754
BssSI CACGAG 1 cut(s) 378
BssT1I CCWWGG 6 cut(s) 102, 170, 678, 804, 931, 1205
Bst2BI CACGAG 1 cut(s) 378
Bst4CI ACNGT 3 cut(s) 742, 866, 1450
Bst6I CTCTTC 3 cut(s) 66, 954, 1467
BstC8I GCNNGC 4 cut(s) 188, 195, 1230, 1372
BstDSI CCRYGG 3 cut(s) 170, 607, 1205
BstF5I GGATG 5 cut(s) 595, 878, 984, 1072, 1501
BstHHI GCGC 2 cut(s) 53, 561
BstKTI GATC 3 cut(s) 33, 109, 757
BstMAI GTCTC 5 cut(s) 68, 74, 852, 1392, 1469
BstMBI GATC 3 cut(s) 30, 106, 754
BstMWI GCNNNNNNNGC 2 cut(s) 221, 455
BstV1I GCAGC 2 cut(s) 202, 202
BstX2I RGATCY 1 cut(s) 754
BstXI CCANNNNNNTGG 1 cut(s) 950
BstYI RGATCY 1 cut(s) 754
BsuRI GGCC 1 cut(s) 542
BtgI CCRYGG 3 cut(s) 170, 607, 1205
BtgZI GCGATG 3 cut(s) 20, 824, 1270
BtsCI GGATG 5 cut(s) 595, 878, 984, 1072, 1501
BtsI GCAGTG 2 cut(s) 181, 1216
BtsIMutI CAGTG 6 cut(s) 181, 252, 277, 828, 1131, 1216
BveI ACCTGC 1 cut(s) 433
Cac8I GCNNGC 4 cut(s) 188, 195, 1230, 1372
CaiI CAGNNNCTG 1 cut(s) 632
CfoI GCGC 2 cut(s) 53, 561
Cfr13I GGNCC 3 cut(s) 374, 422, 629
CseI GACGC 1 cut(s) 207
Csp6I GTAC 3 cut(s) 862, 946, 1261
CviAII CATG 4 cut(s) 171, 538, 1047, 1206
CviQI GTAC 3 cut(s) 862, 946, 1261
DpnI GATC 3 cut(s) 32, 108, 756
DpnII GATC 3 cut(s) 30, 106, 754
DrdI GACNNNNNNGTC 1 cut(s) 1160
DriI GACNNNNNGTC 1 cut(s) 635
DseDI GACNNNNNNGTC 1 cut(s) 1160
EaeI YGGCCR 1 cut(s) 540
Eam1104I CTCTTC 3 cut(s) 66, 954, 1467
Eam1105I GACNNNNNGTC 1 cut(s) 635
EarI CTCTTC 3 cut(s) 66, 954, 1467
Ecl136II GAGCTC 1 cut(s) 1501
Eco130I CCWWGG 6 cut(s) 102, 170, 678, 804, 931, 1205
Eco24I GRGCYC 1 cut(s) 1503
Eco47I GGWCC 3 cut(s) 374, 422, 629
Eco53kI GAGCTC 1 cut(s) 1501
EcoICRI GAGCTC 1 cut(s) 1501
EcoO109I RGGNCCY 1 cut(s) 629
EcoRI GAATTC 1 cut(s) 1193
EcoT14I CCWWGG 6 cut(s) 102, 170, 678, 804, 931, 1205
EcoT38I GRGCYC 1 cut(s) 1503
ErhI CCWWGG 6 cut(s) 102, 170, 678, 804, 931, 1205
Esp3I CGTCTC 2 cut(s) 68, 74
FaeI CATG 4 cut(s) 174, 541, 1050, 1209
FaqI GGGAC 2 cut(s) 224, 903
FatI CATG 4 cut(s) 170, 537, 1046, 1205
FauNDI CATATG 1 cut(s) 772
FblI GTMKAC 1 cut(s) 1431
Fnu4HI GCNGC 2 cut(s) 191, 216
FokI GGATG 4 cut(s) 602, 865, 971, 1079
FriOI GRGCYC 1 cut(s) 1503
Fsp4HI GCNGC 2 cut(s) 191, 216
FspBI CTAG 2 cut(s) 911, 1295
GlaI GCGC 2 cut(s) 52, 560
GluI GCNGC 2 cut(s) 191, 216
GsaI CCCAGC 1 cut(s) 1109
GsuI CTGGAG 2 cut(s) 722, 852
HaeIII GGCC 1 cut(s) 542
HgaI GACGC 1 cut(s) 207
HhaI GCGC 2 cut(s) 53, 561
Hin1II CATG 4 cut(s) 174, 541, 1050, 1209
Hin6I GCGC 2 cut(s) 51, 559
HinP1I GCGC 2 cut(s) 51, 559
HincII GTYRAC 3 cut(s) 99, 1033, 1432
HindII GTYRAC 3 cut(s) 99, 1033, 1432
HindIII AAGCTT 3 cut(s) 596, 1226, 1423
HinfI GANTC 9 cut(s) 530, 614, 674, 719, 845, 954, 1043, 1271, 1344
HphI GGTGA 4 cut(s) 112, 704, 730, 926
Hpy166II GTNNAC 7 cut(s) 99, 179, 422, 1033, 1214, 1390, 1432
Hpy188I TCNGA 8 cut(s) 65, 341, 463, 523, 565, 589, 1144, 1505
Hpy188III TCNNGA 8 cut(s) 200, 331, 362, 380, 701, 988, 1173, 1348
Hpy8I GTNNAC 7 cut(s) 99, 179, 422, 1033, 1214, 1390, 1432
Hpy99I CGWCG 3 cut(s) 155, 158, 1433
HpyAV CCTTC 9 cut(s) 79, 205, 475, 830, 917, 1123, 1333, 1388, 1459
HpyCH4III ACNGT 3 cut(s) 742, 866, 1450
HpyCH4IV ACGT 4 cut(s) 20, 237, 1182, 1380
HpyCH4V TGCA 4 cut(s) 186, 296, 938, 1301
HpyF10VI GCNNNNNNNGC 2 cut(s) 221, 455
HpySE526I ACGT 4 cut(s) 20, 237, 1182, 1380
Hsp92II CATG 4 cut(s) 174, 541, 1050, 1209
HspAI GCGC 2 cut(s) 51, 559
Kzo9I GATC 3 cut(s) 30, 106, 754
LmnI GCTCC 6 cut(s) 202, 524, 839, 1084, 1207, 1237
Lsp1109I GCAGC 2 cut(s) 202, 202
LweI GCATC 5 cut(s) 256, 445, 580, 907, 1288
MaeI CTAG 2 cut(s) 911, 1295
MaeII ACGT 4 cut(s) 20, 237, 1182, 1380
MaeIII GTNAC 4 cut(s) 233, 397, 473, 622
MalI GATC 3 cut(s) 32, 108, 756
MbiI CCGCTC 1 cut(s) 1374
MboI GATC 3 cut(s) 30, 106, 754
MboII GAAGA 6 cut(s) 83, 421, 593, 971, 1424, 1484
MflI RGATCY 1 cut(s) 754
MhlI GDGCHC 1 cut(s) 1503
MlsI TGGCCA 1 cut(s) 542
MluCI AATT 7 cut(s) 290, 438, 554, 665, 707, 1074, 1193
MluNI TGGCCA 1 cut(s) 542
MlyI GAGTC 4 cut(s) 623, 854, 948, 1265
MmeI TCCRAC 2 cut(s) 906, 1432
Mox20I TGGCCA 1 cut(s) 542
MroXI GAANNNNTTC 2 cut(s) 89, 1343
MscI TGGCCA 1 cut(s) 542
MseI TTAA 4 cut(s) 441, 822, 852, 1166
MslI CAYNNNNRTG 1 cut(s) 771
Msp20I TGGCCA 1 cut(s) 542
MspA1I CMGCKG 1 cut(s) 449
Mva1269I GAATGC 2 cut(s) 726, 938
MwoI GCNNNNNNNGC 2 cut(s) 221, 455
NcoI CCATGG 2 cut(s) 170, 1205
NdeI CATATG 1 cut(s) 772
NdeII GATC 3 cut(s) 30, 106, 754
NlaIII CATG 4 cut(s) 174, 541, 1050, 1209
NlaIV GGNNCC 1 cut(s) 520
NmuCI GTSAC 1 cut(s) 473
PcsI WCGNNNNNNNCGW 2 cut(s) 26, 147
PctI GAATGC 2 cut(s) 726, 938
PdmI GAANNNNTTC 2 cut(s) 89, 1343
PfeI GAWTC 5 cut(s) 530, 674, 719, 1043, 1344
PflFI GACNNNGTC 2 cut(s) 894, 1160
PflMI CCANNNNNTGG 2 cut(s) 176, 1211
PkrI GCNGC 2 cut(s) 192, 217
PleI GAGTC 4 cut(s) 622, 853, 948, 1265
PpsI GAGTC 4 cut(s) 622, 853, 948, 1265
PpuMI RGGWCCY 1 cut(s) 629
Psp124BI GAGCTC 1 cut(s) 1503
Psp1406I AACGTT 2 cut(s) 1182, 1380
Psp5II RGGWCCY 1 cut(s) 629
PspFI CCCAGC 1 cut(s) 1105
PspN4I GGNNCC 1 cut(s) 520
PspPI GGNCC 3 cut(s) 374, 422, 629
PspPPI RGGWCCY 1 cut(s) 629
PstNI CAGNNNCTG 1 cut(s) 632
PsuI RGATCY 1 cut(s) 754
PsyI GACNNNGTC 2 cut(s) 894, 1160
PvuII CAGCTG 1 cut(s) 449
RsaI GTAC 3 cut(s) 863, 947, 1262
RsaNI GTAC 3 cut(s) 862, 946, 1261
RseI CAYNNNNRTG 1 cut(s) 771
SacI GAGCTC 1 cut(s) 1503
SalI GTCGAC 1 cut(s) 1430
SaqAI TTAA 4 cut(s) 441, 822, 852, 1166
SatI GCNGC 2 cut(s) 191, 216
Sau3AI GATC 3 cut(s) 30, 106, 754
Sau96I GGNCC 3 cut(s) 374, 422, 629
ScaI AGTACT 1 cut(s) 947
SchI GAGTC 4 cut(s) 623, 854, 948, 1265
SduI GDGCHC 1 cut(s) 1503
SfaNI GCATC 5 cut(s) 256, 445, 580, 907, 1288
SinI GGWCC 3 cut(s) 374, 422, 629
SmiMI CAYNNNNRTG 1 cut(s) 771
SmlI CTYRAG 1 cut(s) 1273
SmoI CTYRAG 1 cut(s) 1273
Sse9I AATT 7 cut(s) 290, 438, 554, 665, 707, 1074, 1193
SsiI CCGC 2 cut(s) 1305, 1374
SspMI CTAG 2 cut(s) 911, 1295
SstI GAGCTC 1 cut(s) 1503
StyI CCWWGG 6 cut(s) 102, 170, 678, 804, 931, 1205
TaaI ACNGT 3 cut(s) 742, 866, 1450
TaiI ACGT 4 cut(s) 23, 240, 1185, 1383
TaqI TCGA 5 cut(s) 29, 156, 687, 957, 1431
TasI AATT 7 cut(s) 290, 438, 554, 665, 707, 1074, 1193
TatI WGTACW 1 cut(s) 945
TfiI GAWTC 5 cut(s) 530, 674, 719, 1043, 1344
Tru1I TTAA 4 cut(s) 441, 822, 852, 1166
Tru9I TTAA 4 cut(s) 441, 822, 852, 1166
TscAI CASTG 6 cut(s) 188, 252, 277, 835, 1131, 1223
TseFI GTSAC 1 cut(s) 473
TseI GCWGC 2 cut(s) 190, 215
Tsp45I GTSAC 1 cut(s) 473
TspDTI ATGAA 5 cut(s) 136, 526, 675, 808, 1408
TspGWI ACGGA 3 cut(s) 92, 360, 387
TspRI CASTG 6 cut(s) 188, 252, 277, 835, 1131, 1223
Tth111I GACNNNGTC 2 cut(s) 894, 1160
Van91I CCANNNNNTGG 2 cut(s) 176, 1211
VpaK11BI GGWCC 3 cut(s) 374, 422, 629
XapI RAATTY 3 cut(s) 290, 707, 1193
XmiI GTMKAC 1 cut(s) 1431
XmnI GAANNNNTTC 2 cut(s) 89, 1343
XspI CTAG 2 cut(s) 911, 1295
ZrmI AGTACT 1 cut(s) 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.