pycom08g13850

disulfide-isomerase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
12780237 .. 12783729
3493 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g13850.9

Sequence Viewer

Length: 1446 bp
ATGGCGTCGTCGTCTAGGGTTTCGCTATGCTTCTTCTTCCTCCTCGCCGTGTTCTCCACCGCGATCCGCGCCGAGGAGGCGGAATCGAAGGAGTACGTCCTCACTCTCGACAGCTCCAACTTCGCTGACACTGTCGGCAAGCACGACTTCATCGTCGTCGAGTTCTACGCGCCGTGGTGTGGCCACTGCAAGAAGCTCGCTCCCGAGGTTGATGCCAACGAAGAGGCAAACAAAGGACTTGCTTCTGATTATGAGGTGAAGGGATTCCCCACAATTAAGATTCTAAGAAATGGTGGGAAGACCATCCAAGAATACAAGGGTCCTCGAGAAGCCGAGGGTATTGTTGAATATTTGAAGAAACAAAGCGGTCCTCCTTCTGTCGAAATCAAGACTACTGACGATGCAACTACTCTTGTTGGCGACAAGAAGATTGTTGTTGTTGGTGTGTTCAAGGAGTTCTCCGGAGAGGCATATAATAACTTCTCGGCACTGGCTGAGAAATTGCGTTCTGATTATGAATTTGGTCACACCCTGGATGCCAAGCTCCTTCCTCGTGGTGATTCATCAGTGTCTGGACCCGTAGTTAGATTGTTCAAGCCCTTTGATGAACCTTTTGTTGATATTGAGGATTTTCATGTGGATGCTCTAGAGAAGTTTGTTGAAGATGCTAGTGTGCCAGTTGTAACAGAATTCAACAATGACCCAACCAATCACCCTTTTGTTATCAAATTCTTCAACAGTCCAAATGAGAAGGCTATGTTGTTTCTGAACTTCAGTGACGAGTCTTCTGATGCTTTTAAATCAACGTATCGTGAAGTTGCTGAGAAATATAAGAAAGAAGGCATAAGCTTTCTCATTGGAGATATTGAGGCTAGTCAGGGCGCCTTCCAGTATTTTGGACTCAAAGAAGACCAGGTGCCTCTCATCATCATCCAGACTCCCGGTGGCCAAAAGTTTTTGAAACCAAATTTGCAGCCAGATCACATAACATCATGGGTTAAGGAGTACAAGGATGGGAAAGTATCACCATACAAGAAGTCTGAGCCTATTCCTGAGCAAAACAATGAGCCTGTCAAGGTAGTCGTTGCTGACAGCATCCAGGACTACATCAAGTCTGAGAAAAATGTGTTGCTTGAGTTTTATGCTCCTTGGTGCGGACACTGCAAGAAGCTTGCTCCTATTTTGGATGAAGTTGCTGCCTCGTATGAAAAGGATTCCGATGTCGTTATTGCAAAATTTGATGCCACTGCAAATGATGTGCCTAGCGACTTTGATGTCAAATACTACCCAACTCTGTACTTCAAGACGGCGAGTGGAAAGGTCTTGTCGTATGACGAGGAAGATAGAACTAAGGAAGCCATCATTGCTTTCATTGAAAAGAACCGGGACAAAATTGAGAAACAAGCAGAGTCGGAGAAGCAAGAATCCGGAAAAGATGAGCTCTAA

Protein Analysis

482

Amino Acids

53.99

Weight (kDa)

4.88

Isoelectric Point (pI)

35.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011915)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 152, 1274
AccB1I GGYRCC 2 cut(s) 881, 916
AccII CGCG 3 cut(s) 62, 69, 170
AccIII TCCGGA 2 cut(s) 461, 1427
AciI CCGC 5 cut(s) 60, 67, 80, 366, 1155
AclWI GGATC 1 cut(s) 58
AcoI YGGCCR 2 cut(s) 181, 946
AcsI RAATTY 5 cut(s) 518, 689, 728, 967, 1235
AcuI CTGAAG 1 cut(s) 757
AcyI GRCGYC 2 cut(s) 5, 882
AfaI GTAC 3 cut(s) 95, 1007, 1298
AfiI CCNNNNNNNGG 3 cut(s) 73, 179, 1154
AjnI CCWGG 3 cut(s) 531, 912, 1098
AluBI AGCT 6 cut(s) 114, 196, 544, 849, 1171, 1441
AluI AGCT 6 cut(s) 114, 196, 544, 849, 1171, 1441
Alw21I GWGCWC 1 cut(s) 1443
AlwI GGATC 1 cut(s) 58
AlwNI CAGNNNCTG 1 cut(s) 572
Ama87I CYCGRG 2 cut(s) 203, 324
Aor13HI TCCGGA 2 cut(s) 461, 1427
AoxI GGCC 2 cut(s) 181, 946
ApeKI GCWGC 2 cut(s) 973, 1196
ApoI RAATTY 5 cut(s) 518, 689, 728, 967, 1235
Asp700I GAANNNNTTC 1 cut(s) 263
AspLEI GCGC 3 cut(s) 71, 172, 884
AspS9I GGNCC 3 cut(s) 320, 368, 575
AsuC2I CCSGG 2 cut(s) 942, 1385
AsuHPI GGTGA 4 cut(s) 268, 569, 704, 1017
AvaI CYCGRG 2 cut(s) 203, 324
AvaII GGWCC 3 cut(s) 320, 368, 575
BalI TGGCCA 2 cut(s) 183, 948
BanI GGYRCC 2 cut(s) 881, 916
BanII GRGCYC 1 cut(s) 1443
BauI CACGAG 1 cut(s) 552
BbsI GAAGAC 3 cut(s) 305, 777, 915
Bbv12I GWGCWC 1 cut(s) 1443
BbvI GCAGC 2 cut(s) 985, 1183
BccI CCATC 3 cut(s) 311, 1007, 1367
BceAI ACGGC 3 cut(s) 32, 157, 1323
BcgI CGANNNNNNTGC 4 cut(s) 178, 194, 212, 228
BciT130I CCWGG 3 cut(s) 533, 914, 1100
BcnI CCSGG 2 cut(s) 942, 1385
BfaI CTAG 5 cut(s) 15, 647, 669, 873, 1263
BfoI RGCGCY 1 cut(s) 885
BglI GCCNNNNNGGC 1 cut(s) 77
BisI GCNGC 2 cut(s) 974, 1197
BlsI GCNGC 2 cut(s) 975, 1198
Bme1390I CCNGG 5 cut(s) 533, 914, 942, 1100, 1385
Bme18I GGWCC 3 cut(s) 320, 368, 575
BmeT110I CYCGRG 2 cut(s) 203, 324
BmgT120I GGNCC 3 cut(s) 320, 368, 575
BmiI GGNNCC 4 cut(s) 321, 577, 883, 918
BmrFI CCNGG 5 cut(s) 533, 914, 942, 1100, 1385
BmsI GCATC 8 cut(s) 202, 391, 526, 631, 655, 781, 1104, 1231
BpiI GAAGAC 3 cut(s) 305, 777, 915
Bpu10I CCTNAGC 1 cut(s) 1053
BpuEI CTTGAG 1 cut(s) 1154
BpuMI CCSGG 2 cut(s) 942, 1385
BsaHI GRCGYC 2 cut(s) 5, 882
BsaJI CCNNGG 6 cut(s) 72, 173, 204, 333, 531, 1148
BsaWI WCCGGW 2 cut(s) 461, 1427
Bsc4I CCNNNNNNNGG 3 cut(s) 73, 179, 1154
Bse1I ACTGG 3 cut(s) 495, 677, 889
Bse3DI GCAATG 1 cut(s) 1362
BseAI TCCGGA 2 cut(s) 461, 1427
BseBI CCWGG 3 cut(s) 533, 914, 1100
BseDI CCNNGG 6 cut(s) 72, 173, 204, 333, 531, 1148
BseGI GGATG 7 cut(s) 303, 541, 646, 930, 1018, 1095, 1192
BseLI CCNNNNNNNGG 3 cut(s) 73, 179, 1154
BseMI GCAATG 1 cut(s) 1362
BseMII CTCAG 5 cut(s) 486, 813, 1032, 1044, 1107
BseNI ACTGG 3 cut(s) 495, 677, 889
BseRI GAGGAG 2 cut(s) 32, 89
BseXI GCAGC 2 cut(s) 985, 1183
Bsh1236I CGCG 3 cut(s) 62, 69, 170
BshFI GGCC 2 cut(s) 183, 948
BshNI GGYRCC 2 cut(s) 881, 916
BsiHKAI GWGCWC 1 cut(s) 1443
BsiHKCI CYCGRG 2 cut(s) 203, 324
BsiSI CCGG 4 cut(s) 462, 942, 1384, 1428
BslFI GGGAC 1 cut(s) 1400
BslI CCNNNNNNNGG 3 cut(s) 73, 179, 1154
BsmFI GGGAC 1 cut(s) 1400
BsnI GGCC 2 cut(s) 183, 948
BsoBI CYCGRG 2 cut(s) 203, 324
Bsp1286I GDGCHC 1 cut(s) 1443
Bsp13I TCCGGA 2 cut(s) 461, 1427
Bsp143I GATC 2 cut(s) 63, 979
BspACI CCGC 5 cut(s) 60, 67, 80, 366, 1155
BspANI GGCC 2 cut(s) 183, 948
BspCNI CTCAG 5 cut(s) 487, 814, 1033, 1045, 1108
BspEI TCCGGA 2 cut(s) 461, 1427
BspFNI CGCG 3 cut(s) 62, 69, 170
BspLI GGNNCC 4 cut(s) 321, 577, 883, 918
BspPI GGATC 1 cut(s) 58
BspT107I GGYRCC 2 cut(s) 881, 916
BsrDI GCAATG 1 cut(s) 1362
BsrI ACTGG 3 cut(s) 495, 677, 889
BssECI CCNNGG 6 cut(s) 72, 173, 204, 333, 531, 1148
BssMI GATC 2 cut(s) 63, 979
BssNI GRCGYC 2 cut(s) 5, 882
BssSI CACGAG 1 cut(s) 552
BssT1I CCWWGG 1 cut(s) 1148
Bst2BI CACGAG 1 cut(s) 552
Bst2UI CCWGG 3 cut(s) 533, 914, 1100
Bst4CI ACNGT 2 cut(s) 133, 740
Bst6I CTCTTC 1 cut(s) 216
BstACI GRCGYC 2 cut(s) 5, 882
BstC8I GCNNGC 3 cut(s) 140, 198, 1173
BstDEI CTNAG 7 cut(s) 284, 495, 822, 1041, 1053, 1116, 1350
BstDSI CCRYGG 1 cut(s) 173
BstF5I GGATG 7 cut(s) 303, 541, 646, 930, 1018, 1095, 1192
BstFNI CGCG 3 cut(s) 62, 69, 170
BstH2I RGCGCY 1 cut(s) 885
BstHHI GCGC 3 cut(s) 71, 172, 884
BstKTI GATC 2 cut(s) 66, 982
BstMBI GATC 2 cut(s) 63, 979
BstMWI GCNNNNNNNGC 4 cut(s) 68, 77, 1161, 1364
BstNI CCWGG 3 cut(s) 533, 914, 1100
BstSCI CCNGG 5 cut(s) 531, 912, 940, 1098, 1383
BstUI CGCG 3 cut(s) 62, 69, 170
BstV1I GCAGC 2 cut(s) 985, 1183
BstV2I GAAGAC 3 cut(s) 305, 777, 915
BstXI CCANNNNNNTGG 1 cut(s) 896
BsuRI GGCC 2 cut(s) 183, 948
BtgI CCRYGG 1 cut(s) 173
BtsCI GGATG 7 cut(s) 303, 541, 646, 930, 1018, 1095, 1192
BtsI GCAGTG 3 cut(s) 184, 1159, 1245
BtsIMutI CAGTG 7 cut(s) 129, 184, 488, 573, 781, 1159, 1245
Cac8I GCNNGC 3 cut(s) 140, 198, 1173
CaiI CAGNNNCTG 1 cut(s) 572
CfoI GCGC 3 cut(s) 71, 172, 884
Cfr13I GGNCC 3 cut(s) 320, 368, 575
CsiI ACCWGGT 1 cut(s) 912
Csp6I GTAC 3 cut(s) 94, 1006, 1297
CviAII CATG 2 cut(s) 635, 993
CviQI GTAC 3 cut(s) 94, 1006, 1297
DdeI CTNAG 7 cut(s) 284, 495, 822, 1041, 1053, 1116, 1350
DinI GGCGCC 1 cut(s) 883
DpnI GATC 2 cut(s) 65, 981
DpnII GATC 2 cut(s) 63, 979
DraI TTTAAA 1 cut(s) 799
DrdI GACNNNNNNGTC 2 cut(s) 152, 1274
DseDI GACNNNNNNGTC 2 cut(s) 152, 1274
EaeI YGGCCR 2 cut(s) 181, 946
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
EciI GGCGGA 1 cut(s) 95
Ecl136II GAGCTC 1 cut(s) 1441
Eco130I CCWWGG 1 cut(s) 1148
Eco24I GRGCYC 1 cut(s) 1443
Eco47I GGWCC 3 cut(s) 320, 368, 575
Eco53kI GAGCTC 1 cut(s) 1441
Eco57I CTGAAG 1 cut(s) 757
Eco88I CYCGRG 2 cut(s) 203, 324
EcoICRI GAGCTC 1 cut(s) 1441
EcoO109I RGGNCCY 1 cut(s) 320
EcoRI GAATTC 1 cut(s) 689
EcoRII CCWGG 3 cut(s) 531, 912, 1098
EcoT14I CCWWGG 1 cut(s) 1148
EcoT38I GRGCYC 1 cut(s) 1443
EgeI GGCGCC 1 cut(s) 883
EheI GGCGCC 1 cut(s) 883
ErhI CCWWGG 1 cut(s) 1148
FaeI CATG 2 cut(s) 638, 996
FalI AAGNNNNNCTT 2 cut(s) 131, 163
FaqI GGGAC 1 cut(s) 1400
FatI CATG 2 cut(s) 634, 992
Fnu4HI GCNGC 2 cut(s) 974, 1197
FokI GGATG 7 cut(s) 290, 548, 653, 917, 1025, 1082, 1199
FriOI GRGCYC 1 cut(s) 1443
Fsp4HI GCNGC 2 cut(s) 974, 1197
FspBI CTAG 5 cut(s) 15, 647, 669, 873, 1263
GlaI GCGC 3 cut(s) 70, 171, 883
GluI GCNGC 2 cut(s) 974, 1197
HaeII RGCGCY 1 cut(s) 885
HaeIII GGCC 2 cut(s) 183, 948
HapII CCGG 4 cut(s) 462, 942, 1384, 1428
HhaI GCGC 3 cut(s) 71, 172, 884
Hin1I GRCGYC 2 cut(s) 5, 882
Hin1II CATG 2 cut(s) 638, 996
Hin6I GCGC 3 cut(s) 69, 170, 882
HinP1I GCGC 3 cut(s) 69, 170, 882
HindIII AAGCTT 2 cut(s) 847, 1169
HpaII CCGG 4 cut(s) 462, 942, 1384, 1428
HphI GGTGA 4 cut(s) 268, 569, 704, 1017
Hpy188I TCNGA 8 cut(s) 247, 511, 768, 790, 1042, 1117, 1219, 1414
Hpy99I CGWCG 4 cut(s) 10, 13, 158, 161
HpyAV CCTTC 7 cut(s) 82, 253, 384, 557, 745, 833, 895
HpyCH4III ACNGT 2 cut(s) 133, 740
HpyCH4IV ACGT 2 cut(s) 96, 806
HpyCH4V TGCA 6 cut(s) 189, 404, 973, 1164, 1232, 1250
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 77, 1161, 1364
HpyF3I CTNAG 7 cut(s) 284, 495, 822, 1041, 1053, 1116, 1350
HpySE526I ACGT 2 cut(s) 96, 806
Hsp92I GRCGYC 2 cut(s) 5, 882
Hsp92II CATG 2 cut(s) 638, 996
HspAI GCGC 3 cut(s) 69, 170, 882
KasI GGCGCC 1 cut(s) 881
Kpn2I TCCGGA 2 cut(s) 461, 1427
Kzo9I GATC 2 cut(s) 63, 979
LmnI GCTCC 5 cut(s) 119, 205, 549, 1150, 1180
Lsp1109I GCAGC 2 cut(s) 985, 1183
LweI GCATC 8 cut(s) 202, 391, 526, 631, 655, 781, 1104, 1231
MabI ACCWGGT 1 cut(s) 912
MaeI CTAG 5 cut(s) 15, 647, 669, 873, 1263
MaeII ACGT 2 cut(s) 96, 806
MaeIII GTNAC 3 cut(s) 524, 682, 776
MalI GATC 2 cut(s) 65, 981
MboI GATC 2 cut(s) 63, 979
MhlI GDGCHC 1 cut(s) 1443
MlsI TGGCCA 2 cut(s) 183, 948
MluCI AATT 8 cut(s) 273, 500, 518, 689, 728, 967, 1235, 1392
MluNI TGGCCA 2 cut(s) 183, 948
Mly113I GGCGCC 1 cut(s) 882
MlyI GAGTC 4 cut(s) 791, 894, 931, 1418
MmeI TCCRAC 2 cut(s) 141, 1392
Mox20I TGGCCA 2 cut(s) 183, 948
MroI TCCGGA 2 cut(s) 461, 1427
MroXI GAANNNNTTC 1 cut(s) 263
MscI TGGCCA 2 cut(s) 183, 948
MseI TTAA 3 cut(s) 276, 798, 999
MslI CAYNNNNRTG 1 cut(s) 639
Msp20I TGGCCA 2 cut(s) 183, 948
MspI CCGG 4 cut(s) 462, 942, 1384, 1428
MspR9I CCNGG 5 cut(s) 533, 914, 942, 1100, 1385
MvaI CCWGG 3 cut(s) 533, 914, 1100
MvnI CGCG 3 cut(s) 62, 69, 170
MwoI GCNNNNNNNGC 4 cut(s) 68, 77, 1161, 1364
NarI GGCGCC 1 cut(s) 882
NciI CCSGG 2 cut(s) 942, 1385
NdeII GATC 2 cut(s) 63, 979
NlaIII CATG 2 cut(s) 638, 996
NlaIV GGNNCC 4 cut(s) 321, 577, 883, 918
NmeAIII GCCGAG 3 cut(s) 97, 358, 464
NmuCI GTSAC 2 cut(s) 524, 776
PaeR7I CTCGAG 1 cut(s) 324
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 150
PdmI GAANNNNTTC 1 cut(s) 263
PfeI GAWTC 6 cut(s) 83, 264, 280, 560, 1214, 1424
PflFI GACNNNGTC 1 cut(s) 131
PfoI TCCNGGA 1 cut(s) 1098
PkrI GCNGC 2 cut(s) 975, 1198
PleI GAGTC 4 cut(s) 790, 894, 931, 1417
PluTI GGCGCC 1 cut(s) 885
PpsI GAGTC 4 cut(s) 790, 894, 931, 1417
PpuMI RGGWCCY 1 cut(s) 320
Psp124BI GAGCTC 1 cut(s) 1443
Psp5II RGGWCCY 1 cut(s) 320
Psp6I CCWGG 3 cut(s) 531, 912, 1098
PspGI CCWGG 3 cut(s) 531, 912, 1098
PspN4I GGNNCC 4 cut(s) 321, 577, 883, 918
PspPI GGNCC 3 cut(s) 320, 368, 575
PspPPI RGGWCCY 1 cut(s) 320
PstNI CAGNNNCTG 1 cut(s) 572
PsyI GACNNNGTC 1 cut(s) 131
RsaI GTAC 3 cut(s) 95, 1007, 1298
RsaNI GTAC 3 cut(s) 94, 1006, 1297
RseI CAYNNNNRTG 1 cut(s) 639
SacI GAGCTC 1 cut(s) 1443
SaqAI TTAA 3 cut(s) 276, 798, 999
SatI GCNGC 2 cut(s) 974, 1197
Sau3AI GATC 2 cut(s) 63, 979
Sau96I GGNCC 3 cut(s) 320, 368, 575
SchI GAGTC 4 cut(s) 791, 894, 931, 1418
ScrFI CCNGG 5 cut(s) 533, 914, 942, 1100, 1385
SduI GDGCHC 1 cut(s) 1443
SexAI ACCWGGT 1 cut(s) 912
SfaNI GCATC 8 cut(s) 202, 391, 526, 631, 655, 781, 1104, 1231
SfoI GGCGCC 1 cut(s) 883
Sfr274I CTCGAG 1 cut(s) 324
SinI GGWCC 3 cut(s) 320, 368, 575
SlaI CTCGAG 1 cut(s) 324
SmiMI CAYNNNNRTG 1 cut(s) 639
SmlI CTYRAG 2 cut(s) 324, 1133
SmoI CTYRAG 2 cut(s) 324, 1133
Sse9I AATT 8 cut(s) 273, 500, 518, 689, 728, 967, 1235, 1392
SsiI CCGC 5 cut(s) 60, 67, 80, 366, 1155
SspDI GGCGCC 1 cut(s) 881
SspI AATATT 1 cut(s) 350
SspMI CTAG 5 cut(s) 15, 647, 669, 873, 1263
SstI GAGCTC 1 cut(s) 1443
StyD4I CCNGG 5 cut(s) 531, 912, 940, 1098, 1383
StyI CCWWGG 1 cut(s) 1148
TaaI ACNGT 2 cut(s) 133, 740
TaiI ACGT 2 cut(s) 99, 809
TaqI TCGA 5 cut(s) 86, 108, 159, 325, 381
TasI AATT 8 cut(s) 273, 500, 518, 689, 728, 967, 1235, 1392
TatI WGTACW 2 cut(s) 1005, 1296
TfiI GAWTC 6 cut(s) 83, 264, 280, 560, 1214, 1424
Tru1I TTAA 3 cut(s) 276, 798, 999
Tru9I TTAA 3 cut(s) 276, 798, 999
TscAI CASTG 7 cut(s) 136, 191, 495, 573, 781, 1166, 1252
TseFI GTSAC 2 cut(s) 524, 776
TseI GCWGC 2 cut(s) 973, 1196
Tsp45I GTSAC 2 cut(s) 524, 776
TspDTI ATGAA 8 cut(s) 139, 531, 552, 621, 623, 1203, 1221, 1360
TspRI CASTG 7 cut(s) 136, 191, 495, 573, 781, 1166, 1252
Tth111I GACNNNGTC 1 cut(s) 131
VpaK11BI GGWCC 3 cut(s) 320, 368, 575
XapI RAATTY 5 cut(s) 518, 689, 728, 967, 1235
XbaI TCTAGA 1 cut(s) 646
XcmI CCANNNNNNNNNTGG 1 cut(s) 941
XhoI CTCGAG 1 cut(s) 324
XmnI GAANNNNTTC 1 cut(s) 263
XspI CTAG 5 cut(s) 15, 647, 669, 873, 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.