Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003139.1

Orthogroup ID

OG0011915

Physical Location & Seq

Genomic Coordinates Reverse (-)

177684 .. 182622

Gene Structure 4939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003139.1_g000043.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

atggcgatctctatctccaataacttctttaatcggtgctatttctttacccagcatggggaagagtgcgcactaccaactggttttgtttcattgatctccgaggcaaagtttgtgcaatgggataagtcccaaatggtcagatcaaccacgcaaagcccgattgaaatttttggcgatcggcaggtgacaagggaggcagcgctccatttttctggagtggtggcgagtttccgaatgcaccacgctgctagtgagctcactggcgttggcggcggagaatgtgcggatgccatttcggtggagtggtgtcatgggaatagtacgacggtgtcaaactctgtaaagtcactgctggaggggcgttctggtatccgtccccagtttatggttgcggcggcggtaattgtgcaatggttgagttgtgaggcagtgaccatggtagatgggacagtcgccaccccaggttgggtgcccatatcaattggatggcccaggctaaggtgtggccactgcaagaagctggttccagagtatgaaaaagctgcatctatcttgagcagtaatgacccaccagtcattctagcaaaagttgatgcaaatgaggaagcaaacaaaggacttgcttctgaatatgatgttaagggtttccccacaatcaaaattctaagaaatggtgggaagattatccaggaatacaagggtcctcgtgaagccgatggtattgttacttatttgaagaaacaaagtggtccagcttctgttgaaataaagagtgctgatgatgcagctactgttattggtgaaaagaagatagttgttgttggtgtgtttgacaagttctctggagaggagtatgagaaattcttggctctagctcagaaattgcgttcagattatgaatttggtcacactcttgatgtaaagcacctaccccgtggtgattcatctgtgactgggccagtagttagactgttcaagccatttgatgaactttttgttgatttcaaggaattcaatgtagaggctctagagaagttcattgaagaatctagcttgccagttattacagaattcaacaatgacccagacaaccacccttttgttatcaagttcttcaatgttccaaatgataaggctatgttgtttctgaacttcagcagtgatgttgctgatgctttgaaatcaaagtatcgtgaagtagctgagaaatacaaaggagaaggcataagctttttagttggagatctagaggctagtcaaggtgccttccagtactttggacttaaagaagaccaagtgcctctcatcatcatacagaccaatgacggacaaaagtttttgaaaccacatttggagccagatcatatttcagtttgggtgaaggaatacaaggatgggaaagtatcaccatacaagaagtctgaacccatccctgagaagaacgatgaccctgttaaagttgtagtcgctgagagcctccaggacattgttttcaagtctgggaaaaatgtgctgctcgagttttatgctccatggtgtggacactgcaagaagcttgcaccaatcttggatgaagttgctgtatcatttgaaaaggatcctgaagttgttattgcaaagtttgacgctactgcaaatgatgtcccaagtgagttcgatgtgaaatactatcccactttgaggacaggtccaaggaaagcctcattgctttcatcgaaaagaatcgggacaaatctgagactaaagctgagaaccaagagtcctcaaaagatgagctctaaagaggacgacaacctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000322 GO:0000323 GO:0000325 GO:0000326 GO:0000327 GO:0003006 GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0005794 GO:0005886 GO:0006457 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009505 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009960 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0010109 GO:0010154 GO:0010205 GO:0010941 GO:0012505 GO:0016020 GO:0016853 GO:0016860 GO:0016864 GO:0019222 GO:0022414 GO:0030312 GO:0031090 GO:0031323 GO:0031324 GO:0031974 GO:0032501 GO:0032502 GO:0033554 GO:0034975 GO:0034976 GO:0042221 GO:0042548 GO:0043067 GO:0043155 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043467 GO:0044422 GO:0044424 GO:0044432 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048316 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070013 GO:0071944 GO:0098588 GO:0098805 GO:0140096 GO:1905156

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Thioredoxin Thioredoxin_6

Protein Analysis

600

Amino Acids

66.59

Weight (kDa)

5.86

Isoelectric Point (pI)

35.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21750 AT1G21750 AT1G77510
fragaria_vesca	FvH4_2g27200
malus_domestica	MD08G1161100.v1.1 MD15G1346200.v1.1
prunus_persica	Prupe.1G494100_v2.0.a1
pyrus_communis	pycom08g13850 pycom15g31030
rosa_chinensis	RchiOBHm_Chr6g0296111
rosa_laevigata	RLG00000011730
rosa_multiflora	Rmu_co8489943.1_g000001 Rmu_sc0003139.1_g000043
rosa_roxburghii	Rroxscaffold_7G00178210
rosa_rugosa	Rorug06G0257800
rosa_samantha	Rh6BG378100 Rh6CG383600 Rh6DG370600
rosa_wichuraiana	Rw6G032300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	175
AasI	GACNNNNNNGTC	1 cut(s)	575
Acc16I	TGCGCA	1 cut(s)	70
Acc36I	ACCTGC	1 cut(s)	175
AccB1I	GGYRCC	2 cut(s)	472, 1265
AccB7I	CCANNNNNTGG	2 cut(s)	388, 1541
AciI	CCGC	6 cut(s)	273, 276, 287, 395, 398, 401
AclWI	GGATC	2 cut(s)	1595, 1608
AcoI	YGGCCR	1 cut(s)	508
AcsI	RAATTY	6 cut(s)	168, 663, 863, 902, 1013, 1073
AcuI	CTGAAG	2 cut(s)	1141, 1626
AfaI	GTAC	2 cut(s)	325, 1277
AfeI	AGCGCT	1 cut(s)	204
AfiI	CCNNNNNNNGG	8 cut(s)	57, 58, 388, 468, 469, 501, 1541, 1683
AjnI	CCWGG	4 cut(s)	463, 494, 690, 1482
AjuI	GAANNNNNNNTTGG	2 cut(s)	1337, 1369
AloI	GAACNNNNNNTCC	2 cut(s)	1747, 1779
Alw21I	GWGCWC	2 cut(s)	261, 1781
Alw26I	GTCTC	1 cut(s)	1735
AlwI	GGATC	2 cut(s)	1595, 1608
AlwNI	CAGNNNCTG	2 cut(s)	761, 794
Ama87I	CYCGRG	1 cut(s)	1520
Aor51HI	AGCGCT	1 cut(s)	204
AoxI	GGCC	3 cut(s)	491, 508, 959
ApeKI	GCWGC	5 cut(s)	200, 248, 545, 788, 1516
ApoI	RAATTY	6 cut(s)	168, 663, 863, 902, 1013, 1073
AspLEI	GCGC	2 cut(s)	71, 205
AspS9I	GGNCC	5 cut(s)	492, 704, 752, 959, 1691
AsuHPI	GGTGA	5 cut(s)	199, 815, 953, 1393, 1401
AvaI	CYCGRG	1 cut(s)	1520
AvaII	GGWCC	3 cut(s)	704, 752, 1691
BaeGI	GKGCMC	1 cut(s)	477
BalI	TGGCCA	1 cut(s)	510
BamHI	GGATCC	1 cut(s)	1600
BanI	GGYRCC	2 cut(s)	472, 1265
BanII	GRGCYC	2 cut(s)	261, 1781
BauI	CACGAG	1 cut(s)	708
BbsI	GAAGAC	1 cut(s)	1299
Bbv12I	GWGCWC	2 cut(s)	261, 1781
BbvI	GCAGC	5 cut(s)	212, 235, 532, 800, 1503
BccI	CCATC	5 cut(s)	440, 483, 713, 1391, 1439
BcgI	CGANNNNNNTGC	2 cut(s)	1511, 1545
BciT130I	CCWGG	4 cut(s)	465, 496, 692, 1484
BciVI	GTATCC	1 cut(s)	383
BcoDI	GTCTC	1 cut(s)	1735
BfaI	CTAG	7 cut(s)	252, 584, 875, 1031, 1053, 1250, 1257
BfoI	RGCGCY	1 cut(s)	206
BfuAI	ACCTGC	1 cut(s)	175
BfuI	GTATCC	1 cut(s)	383
BglII	AGATCT	1 cut(s)	1246
BisI	GCNGC	8 cut(s)	201, 249, 274, 396, 399, 546, 789, 1517
BlsI	GCNGC	8 cut(s)	202, 250, 275, 397, 400, 547, 790, 1518
BmcAI	AGTACT	1 cut(s)	1277
Bme1390I	CCNGG	4 cut(s)	465, 496, 692, 1484
Bme18I	GGWCC	3 cut(s)	704, 752, 1691
BmeT110I	CYCGRG	1 cut(s)	1520
BmgT120I	GGNCC	5 cut(s)	492, 704, 752, 959, 1691
BmiI	GGNNCC	6 cut(s)	474, 528, 705, 1267, 1359, 1602
BmrFI	CCNGG	4 cut(s)	465, 496, 692, 1484
BmrI	ACTGGG	2 cut(s)	376, 966
BmsI	GCATC	5 cut(s)	280, 557, 586, 775, 1165
BmuI	ACTGGG	2 cut(s)	376, 966
BpiI	GAAGAC	1 cut(s)	1299
BpmI	CTGGAG	4 cut(s)	237, 377, 867, 1466
Bpu10I	CCTNAGC	1 cut(s)	500
BpuEI	CTTGAG	1 cut(s)	577
BsaBI	GATNNNNATC	1 cut(s)	11
BsaJI	CCNNGG	7 cut(s)	102, 438, 463, 494, 937, 1535, 1694
Bsc4I	CCNNNNNNNGG	8 cut(s)	57, 58, 388, 468, 469, 501, 1541, 1683
Bse1I	ACTGG	8 cut(s)	85, 268, 382, 575, 961, 962, 1061, 1273
Bse3DI	GCAATG	3 cut(s)	125, 419, 1706
Bse8I	GATNNNNATC	1 cut(s)	11
BseBI	CCWGG	4 cut(s)	465, 496, 692, 1484
BseDI	CCNNGG	7 cut(s)	102, 438, 463, 494, 937, 1535, 1694
BseGI	GGATG	5 cut(s)	295, 494, 1402, 1431, 1579
BseJI	GATNNNNATC	1 cut(s)	11
BseLI	CCNNNNNNNGG	8 cut(s)	57, 58, 388, 468, 469, 501, 1541, 1683
BseMI	GCAATG	3 cut(s)	125, 419, 1706
BseMII	CTCAG	6 cut(s)	893, 1197, 1428, 1464, 1730, 1742
BseNI	ACTGG	8 cut(s)	85, 268, 382, 575, 961, 962, 1061, 1273
BseRI	GAGGAG	1 cut(s)	866
BseSI	GKGCMC	1 cut(s)	477
BseXI	GCAGC	5 cut(s)	212, 235, 532, 800, 1503
BseYI	CCCAGC	1 cut(s)	51
Bsh1285I	CGRYCG	1 cut(s)	181
BshFI	GGCC	3 cut(s)	493, 510, 961
BshNI	GGYRCC	2 cut(s)	472, 1265
BsiEI	CGRYCG	1 cut(s)	181
BsiHKAI	GWGCWC	2 cut(s)	261, 1781
BsiHKCI	CYCGRG	1 cut(s)	1520
BslFI	GGGAC	5 cut(s)	115, 363, 463, 1631, 1744
BslI	CCNNNNNNNGG	8 cut(s)	57, 58, 388, 468, 469, 501, 1541, 1683
BsmAI	GTCTC	1 cut(s)	1735
BsmFI	GGGAC	5 cut(s)	115, 363, 463, 1631, 1744
BsmI	GAATGC	1 cut(s)	243
BsnI	GGCC	3 cut(s)	493, 510, 961
BsoBI	CYCGRG	1 cut(s)	1520
Bsp1286I	GDGCHC	3 cut(s)	261, 477, 1781
Bsp143I	GATC	7 cut(s)	6, 96, 143, 178, 1246, 1363, 1600
Bsp19I	CCATGG	2 cut(s)	438, 1535
BspACI	CCGC	6 cut(s)	273, 276, 287, 395, 398, 401
BspANI	GGCC	3 cut(s)	493, 510, 961
BspCNI	CTCAG	6 cut(s)	892, 1198, 1429, 1465, 1731, 1743
BspLI	GGNNCC	6 cut(s)	474, 528, 705, 1267, 1359, 1602
BspMI	ACCTGC	1 cut(s)	175
BspPI	GGATC	2 cut(s)	1595, 1608
BspT107I	GGYRCC	2 cut(s)	472, 1265
BsrDI	GCAATG	3 cut(s)	125, 419, 1706
BsrI	ACTGG	8 cut(s)	85, 268, 382, 575, 961, 962, 1061, 1273
BssECI	CCNNGG	7 cut(s)	102, 438, 463, 494, 937, 1535, 1694
BssMI	GATC	7 cut(s)	6, 96, 143, 178, 1246, 1363, 1600
BssSI	CACGAG	1 cut(s)	708
BssT1I	CCWWGG	3 cut(s)	438, 1535, 1694
Bst2BI	CACGAG	1 cut(s)	708
Bst2UI	CCWGG	4 cut(s)	465, 496, 692, 1484
Bst4CI	ACNGT	4 cut(s)	331, 454, 796, 975
Bst6I	CTCTTC	1 cut(s)	57
BstC8I	GCNNGC	2 cut(s)	1058, 1560
BstDEI	CTNAG	8 cut(s)	500, 668, 879, 1206, 1437, 1473, 1739, 1751
BstDSI	CCRYGG	3 cut(s)	438, 937, 1535
BstF5I	GGATG	5 cut(s)	295, 494, 1402, 1431, 1579
BstH2I	RGCGCY	1 cut(s)	206
BstHHI	GCGC	2 cut(s)	71, 205
BstKTI	GATC	7 cut(s)	9, 99, 146, 181, 1249, 1366, 1603
BstMAI	GTCTC	1 cut(s)	1735
BstMBI	GATC	7 cut(s)	6, 96, 143, 178, 1246, 1363, 1600
BstMCI	CGRYCG	1 cut(s)	181
BstMWI	GCNNNNNNNGC	3 cut(s)	273, 361, 785
BstNI	CCWGG	4 cut(s)	465, 496, 692, 1484
BstSCI	CCNGG	4 cut(s)	463, 494, 690, 1482
BstSLI	GKGCMC	1 cut(s)	477
BstV1I	GCAGC	5 cut(s)	212, 235, 532, 800, 1503
BstV2I	GAAGAC	1 cut(s)	1299
BstX2I	RGATCY	2 cut(s)	1246, 1600
BstXI	CCANNNNNNTGG	3 cut(s)	215, 301, 1280
BstYI	RGATCY	2 cut(s)	1246, 1600
BsuI	GTATCC	1 cut(s)	383
BsuRI	GGCC	3 cut(s)	493, 510, 961
BtgI	CCRYGG	3 cut(s)	438, 937, 1535
BtsCI	GGATG	5 cut(s)	295, 494, 1402, 1431, 1579
BtsI	GCAGTG	5 cut(s)	350, 438, 511, 1168, 1546
BtsIMutI	CAGTG	6 cut(s)	261, 350, 438, 511, 1168, 1546
BveI	ACCTGC	1 cut(s)	175
Cac8I	GCNNGC	2 cut(s)	1058, 1560
CaiI	CAGNNNCTG	2 cut(s)	761, 794
CfoI	GCGC	2 cut(s)	71, 205
Cfr13I	GGNCC	5 cut(s)	492, 704, 752, 959, 1691
CseI	GACGC	1 cut(s)	1637
Csp6I	GTAC	2 cut(s)	324, 1276
CviAII	CATG	4 cut(s)	56, 314, 439, 1536
CviQI	GTAC	2 cut(s)	324, 1276
DdeI	CTNAG	8 cut(s)	500, 668, 879, 1206, 1437, 1473, 1739, 1751
DpnI	GATC	7 cut(s)	8, 98, 145, 180, 1248, 1365, 1602
DpnII	GATC	7 cut(s)	6, 96, 143, 178, 1246, 1363, 1600
DrdI	GACNNNNNNGTC	1 cut(s)	575
DseDI	GACNNNNNNGTC	1 cut(s)	575
EaeI	YGGCCR	1 cut(s)	508
Eam1104I	CTCTTC	1 cut(s)	57
EarI	CTCTTC	1 cut(s)	57
EciI	GGCGGA	1 cut(s)	291
Ecl136II	GAGCTC	2 cut(s)	259, 1779
Eco130I	CCWWGG	3 cut(s)	438, 1535, 1694
Eco24I	GRGCYC	2 cut(s)	261, 1781
Eco47I	GGWCC	3 cut(s)	704, 752, 1691
Eco47III	AGCGCT	1 cut(s)	204
Eco53kI	GAGCTC	2 cut(s)	259, 1779
Eco57I	CTGAAG	2 cut(s)	1141, 1626
Eco88I	CYCGRG	1 cut(s)	1520
EcoICRI	GAGCTC	2 cut(s)	259, 1779
EcoO109I	RGGNCCY	1 cut(s)	704
EcoRI	GAATTC	2 cut(s)	1013, 1073
EcoRII	CCWGG	4 cut(s)	463, 494, 690, 1482
EcoT14I	CCWWGG	3 cut(s)	438, 1535, 1694
EcoT38I	GRGCYC	2 cut(s)	261, 1781
ErhI	CCWWGG	3 cut(s)	438, 1535, 1694
FaeI	CATG	4 cut(s)	59, 317, 442, 1539
FaqI	GGGAC	5 cut(s)	115, 363, 463, 1631, 1744
FatI	CATG	4 cut(s)	55, 313, 438, 1535
Fnu4HI	GCNGC	8 cut(s)	201, 249, 274, 396, 399, 546, 789, 1517
FokI	GGATG	5 cut(s)	302, 501, 1409, 1418, 1586
FriOI	GRGCYC	2 cut(s)	261, 1781
Fsp4HI	GCNGC	8 cut(s)	201, 249, 274, 396, 399, 546, 789, 1517
FspAI	RTGCGCAY	1 cut(s)	70
FspBI	CTAG	7 cut(s)	252, 584, 875, 1031, 1053, 1250, 1257
FspI	TGCGCA	1 cut(s)	70
GlaI	GCGC	2 cut(s)	70, 204
GluI	GCNGC	8 cut(s)	201, 249, 274, 396, 399, 546, 789, 1517
GsaI	CCCAGC	1 cut(s)	55
GsuI	CTGGAG	4 cut(s)	237, 377, 867, 1466
HaeII	RGCGCY	1 cut(s)	206
HaeIII	GGCC	3 cut(s)	493, 510, 961
HgaI	GACGC	1 cut(s)	1637
HhaI	GCGC	2 cut(s)	71, 205
Hin1II	CATG	4 cut(s)	59, 317, 442, 1539
Hin6I	GCGC	2 cut(s)	69, 203
HinP1I	GCGC	2 cut(s)	69, 203
HindIII	AAGCTT	2 cut(s)	1231, 1556
HinfI	GANTC	4 cut(s)	944, 1049, 1725, 1762
HphI	GGTGA	5 cut(s)	199, 815, 953, 1393, 1401
Hpy166II	GTNNAC	1 cut(s)	1544
Hpy188I	TCNGA	9 cut(s)	103, 143, 236, 631, 882, 895, 1152, 1426, 1740
Hpy8I	GTNNAC	1 cut(s)	1544
Hpy99I	CGWCG	1 cut(s)	331
HpyAV	CCTTC	3 cut(s)	1217, 1279, 1378
HpyCH4III	ACNGT	4 cut(s)	331, 454, 796, 975
HpyF10VI	GCNNNNNNNGC	3 cut(s)	273, 361, 785
HpyF3I	CTNAG	8 cut(s)	500, 668, 879, 1206, 1437, 1473, 1739, 1751
Hsp92II	CATG	4 cut(s)	59, 317, 442, 1539
HspAI	GCGC	2 cut(s)	69, 203
Kzo9I	GATC	7 cut(s)	6, 96, 143, 178, 1246, 1363, 1600
LmnI	GCTCC	3 cut(s)	210, 1357, 1537
Lsp1109I	GCAGC	5 cut(s)	212, 235, 532, 800, 1503
LweI	GCATC	5 cut(s)	280, 557, 586, 775, 1165
MaeI	CTAG	7 cut(s)	252, 584, 875, 1031, 1053, 1250, 1257
MaeIII	GTNAC	6 cut(s)	187, 348, 433, 727, 908, 952
MalI	GATC	7 cut(s)	8, 98, 145, 180, 1248, 1365, 1602
MboI	GATC	7 cut(s)	6, 96, 143, 178, 1246, 1363, 1600
MboII	GAAGA	8 cut(s)	74, 694, 751, 823, 1058, 1108, 1304, 1453
MfeI	CAATTG	1 cut(s)	483
MflI	RGATCY	2 cut(s)	1246, 1600
MhlI	GDGCHC	3 cut(s)	261, 477, 1781
MlsI	TGGCCA	1 cut(s)	510
MluCI	AATT	9 cut(s)	168, 405, 483, 663, 863, 884, 902, 1013, 1073
MluNI	TGGCCA	1 cut(s)	510
MlyI	GAGTC	1 cut(s)	1771
MmeI	TCCRAC	1 cut(s)	1222
Mox20I	TGGCCA	1 cut(s)	510
MscI	TGGCCA	1 cut(s)	510
MseI	TTAA	4 cut(s)	30, 642, 1287, 1458
MslI	CAYNNNNRTG	1 cut(s)	299
Msp20I	TGGCCA	1 cut(s)	510
MspR9I	CCNGG	4 cut(s)	465, 496, 692, 1484
MunI	CAATTG	1 cut(s)	483
Mva1269I	GAATGC	1 cut(s)	243
MvaI	CCWGG	4 cut(s)	465, 496, 692, 1484
MwoI	GCNNNNNNNGC	3 cut(s)	273, 361, 785
NcoI	CCATGG	2 cut(s)	438, 1535
NdeII	GATC	7 cut(s)	6, 96, 143, 178, 1246, 1363, 1600
NlaIII	CATG	4 cut(s)	59, 317, 442, 1539
NlaIV	GGNNCC	6 cut(s)	474, 528, 705, 1267, 1359, 1602
NmuCI	GTSAC	5 cut(s)	187, 348, 433, 908, 952
NsbI	TGCGCA	1 cut(s)	70
PaeR7I	CTCGAG	1 cut(s)	1520
PaqCI	CACCTGC	1 cut(s)	175
PcsI	WCGNNNNNNNCGW	1 cut(s)	158
PctI	GAATGC	1 cut(s)	243
PfeI	GAWTC	3 cut(s)	944, 1049, 1725
PflFI	GACNNNGTC	1 cut(s)	331
PflMI	CCANNNNNTGG	2 cut(s)	388, 1541
PfoI	TCCNGGA	2 cut(s)	690, 1482
PkrI	GCNGC	8 cut(s)	202, 250, 275, 397, 400, 547, 790, 1518
Ple19I	CGATCG	1 cut(s)	181
PleI	GAGTC	1 cut(s)	1770
PpsI	GAGTC	1 cut(s)	1770
PpuMI	RGGWCCY	1 cut(s)	704
Psp124BI	GAGCTC	2 cut(s)	261, 1781
Psp5II	RGGWCCY	1 cut(s)	704
Psp6I	CCWGG	4 cut(s)	463, 494, 690, 1482
PspFI	CCCAGC	1 cut(s)	51
PspGI	CCWGG	4 cut(s)	463, 494, 690, 1482
PspN4I	GGNNCC	6 cut(s)	474, 528, 705, 1267, 1359, 1602
PspPI	GGNCC	5 cut(s)	492, 704, 752, 959, 1691
PspPPI	RGGWCCY	1 cut(s)	704
PspXI	VCTCGAGB	1 cut(s)	1520
PstNI	CAGNNNCTG	2 cut(s)	761, 794
PsuI	RGATCY	2 cut(s)	1246, 1600
PsyI	GACNNNGTC	1 cut(s)	331
PvuI	CGATCG	1 cut(s)	181
RsaI	GTAC	2 cut(s)	325, 1277
RsaNI	GTAC	2 cut(s)	324, 1276
RseI	CAYNNNNRTG	1 cut(s)	299
SacI	GAGCTC	2 cut(s)	261, 1781
SaqAI	TTAA	4 cut(s)	30, 642, 1287, 1458
SatI	GCNGC	8 cut(s)	201, 249, 274, 396, 399, 546, 789, 1517
Sau3AI	GATC	7 cut(s)	6, 96, 143, 178, 1246, 1363, 1600
Sau96I	GGNCC	5 cut(s)	492, 704, 752, 959, 1691
ScaI	AGTACT	1 cut(s)	1277
SchI	GAGTC	1 cut(s)	1771
ScrFI	CCNGG	4 cut(s)	465, 496, 692, 1484
SduI	GDGCHC	3 cut(s)	261, 477, 1781
SfaNI	GCATC	5 cut(s)	280, 557, 586, 775, 1165
Sfr274I	CTCGAG	1 cut(s)	1520
SinI	GGWCC	3 cut(s)	704, 752, 1691
SlaI	CTCGAG	1 cut(s)	1520
SmiMI	CAYNNNNRTG	1 cut(s)	299
SmlI	CTYRAG	2 cut(s)	556, 1520
SmoI	CTYRAG	2 cut(s)	556, 1520
Sse9I	AATT	9 cut(s)	168, 405, 483, 663, 863, 884, 902, 1013, 1073
SsiI	CCGC	6 cut(s)	273, 276, 287, 395, 398, 401
SspMI	CTAG	7 cut(s)	252, 584, 875, 1031, 1053, 1250, 1257
SstI	GAGCTC	2 cut(s)	261, 1781
StyD4I	CCNGG	4 cut(s)	463, 494, 690, 1482
StyI	CCWWGG	3 cut(s)	438, 1535, 1694
TaaI	ACNGT	4 cut(s)	331, 454, 796, 975
TaqI	TCGA	3 cut(s)	1521, 1659, 1718
TasI	AATT	9 cut(s)	168, 405, 483, 663, 863, 884, 902, 1013, 1073
TatI	WGTACW	1 cut(s)	1275
TauI	GCSGC	3 cut(s)	276, 398, 401
TfiI	GAWTC	3 cut(s)	944, 1049, 1725
Tru1I	TTAA	4 cut(s)	30, 642, 1287, 1458
Tru9I	TTAA	4 cut(s)	30, 642, 1287, 1458
TscAI	CASTG	6 cut(s)	268, 357, 438, 518, 1168, 1553
TseFI	GTSAC	5 cut(s)	187, 348, 433, 908, 952
TseI	GCWGC	5 cut(s)	200, 248, 545, 788, 1516
Tsp45I	GTSAC	5 cut(s)	187, 348, 433, 908, 952
TspDTI	ATGAA	8 cut(s)	81, 552, 915, 936, 1005, 1030, 1590, 1704
TspGWI	ACGGA	2 cut(s)	365, 1344
TspRI	CASTG	6 cut(s)	268, 357, 438, 518, 1168, 1553
Tth111I	GACNNNGTC	1 cut(s)	331
Van91I	CCANNNNNTGG	2 cut(s)	388, 1541
VpaK11BI	GGWCC	3 cut(s)	704, 752, 1691
XapI	RAATTY	6 cut(s)	168, 663, 863, 902, 1013, 1073
XbaI	TCTAGA	2 cut(s)	1030, 1249
XhoI	CTCGAG	1 cut(s)	1520
XspI	CTAG	7 cut(s)	252, 584, 875, 1031, 1053, 1250, 1257
ZrmI	AGTACT	1 cut(s)	1277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.