Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013858

Physical Location & Seq

Genomic Coordinates Reverse (-)

9117932 .. 9118611

Gene Structure 680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G26355.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 342 bp

ATGGGTCGTGGAGTGAGCGTAGGTGGTGGGCAAAGTTCTTTAGGGTATCTTTTTGGTAGCGGAGAAGCTCCAAAGCCAGCCATTAACAATGCTCCTGCACCATCATCTGAAACTCTGCCTATAAGTGCTGATCCTTCACCAAAACATGTTGCTGCTCAGACGGTTAATGTTACCAAGCAAATACCTGCTGGTATCAATAAATCCTCTACAAACAACTACATTCGAGCAGATGGACAGAACACAGGCAACTTCCTTACGGACCGGCCATCGACCAAGGTTCATGCAGCCCCTGGAGGCGGCTCATCTCTGGATTACCTCTTCGGTGGTGGCGGAAGCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000902 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0005881 GO:0005938 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0008150 GO:0009524 GO:0009574 GO:0009628 GO:0009651 GO:0009653 GO:0009826 GO:0009987 GO:0010005 GO:0015630 GO:0016043 GO:0016049 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032502 GO:0032989 GO:0033554 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0051211 GO:0051716 GO:0055028 GO:0060560 GO:0071214 GO:0071470 GO:0071472 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

113

Amino Acids

11.27

Weight (kDa)

9.16

Isoelectric Point (pI)

45.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013858)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26355
fragaria_vesca	FvH4_4g29840
malus_domestica	MD13G1060700.v1.1 MD13G1061400.v1.1 MD16G1059900.v1.1
prunus_persica	Prupe.1G288700_v2.0.a1 Prupe.1G288700_v2.0.a1 Prupe.1G288700_v2.0.a1
pyrus_communis	pycom16g05220
rosa_chinensis	RchiOBHm_Chr4g0438091
rosa_laevigata	RLG00000001448
rosa_roxburghii	Rroxscaffold_5G00379230
rosa_rugosa	Rorug04G0306900
rosa_samantha	Rh4BG369300 Rh4CG383400 Rh4DG364100
rosa_wichuraiana	Rw0G006290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	193
AciI	CCGC	3 cut(s)	60, 297, 330
AclWI	GGATC	1 cut(s)	125
AcoI	YGGCCR	1 cut(s)	263
AfiI	CCNNNNNNNGG	1 cut(s)	296
AflIII	ACRYGT	1 cut(s)	145
AjnI	CCWGG	1 cut(s)	289
AluBI	AGCT	1 cut(s)	68
AluI	AGCT	1 cut(s)	68
AlwI	GGATC	1 cut(s)	125
AlwNI	CAGNNNCTG	1 cut(s)	290
AoxI	GGCC	1 cut(s)	263
ApeKI	GCWGC	2 cut(s)	152, 284
AspS9I	GGNCC	1 cut(s)	259
AsuHPI	GGTGA	1 cut(s)	129
AvaII	GGWCC	1 cut(s)	259
BbvI	GCAGC	2 cut(s)	139, 296
BccI	CCATC	3 cut(s)	109, 224, 274
BciT130I	CCWGG	1 cut(s)	291
BfaI	CTAG	1 cut(s)	340
BfuAI	ACCTGC	1 cut(s)	193
BisI	GCNGC	3 cut(s)	153, 285, 298
BlsI	GCNGC	3 cut(s)	154, 286, 299
Bme1390I	CCNGG	1 cut(s)	291
Bme18I	GGWCC	1 cut(s)	259
BmgT120I	GGNCC	1 cut(s)	259
BmrFI	CCNGG	1 cut(s)	291
BpmI	CTGGAG	1 cut(s)	312
BsaJI	CCNNGG	2 cut(s)	273, 289
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	1 cut(s)	296
Bse118I	RCCGGY	1 cut(s)	261
BseBI	CCWGG	1 cut(s)	291
BseDI	CCNNGG	2 cut(s)	273, 289
BseLI	CCNNNNNNNGG	1 cut(s)	296
BseMII	CTCAG	1 cut(s)	170
BseXI	GCAGC	2 cut(s)	139, 296
BsgI	GTGCAG	1 cut(s)	81
BshFI	GGCC	1 cut(s)	265
BsiSI	CCGG	1 cut(s)	262
BslI	CCNNNNNNNGG	1 cut(s)	296
BsnI	GGCC	1 cut(s)	265
Bsp143I	GATC	1 cut(s)	130
BspACI	CCGC	3 cut(s)	60, 297, 330
BspANI	GGCC	1 cut(s)	265
BspCNI	CTCAG	1 cut(s)	169
BspMI	ACCTGC	1 cut(s)	193
BspPI	GGATC	1 cut(s)	125
BsrFI	RCCGGY	1 cut(s)	261
BssAI	RCCGGY	1 cut(s)	261
BssECI	CCNNGG	2 cut(s)	273, 289
BssMI	GATC	1 cut(s)	130
BssT1I	CCWWGG	1 cut(s)	273
Bst2UI	CCWGG	1 cut(s)	291
Bst4CI	ACNGT	1 cut(s)	163
Bst6I	CTCTTC	1 cut(s)	323
BstC8I	GCNNGC	1 cut(s)	78
BstDEI	CTNAG	1 cut(s)	156
BstKTI	GATC	1 cut(s)	133
BstMBI	GATC	1 cut(s)	130
BstNI	CCWGG	1 cut(s)	291
BstNSI	RCATGY	1 cut(s)	149
BstSCI	CCNGG	1 cut(s)	289
BstV1I	GCAGC	2 cut(s)	139, 296
BsuRI	GGCC	1 cut(s)	265
BveI	ACCTGC	1 cut(s)	193
Cac8I	GCNNGC	1 cut(s)	78
CaiI	CAGNNNCTG	1 cut(s)	290
Cfr10I	RCCGGY	1 cut(s)	261
Cfr13I	GGNCC	1 cut(s)	259
CpoI	CGGWCCG	1 cut(s)	259
CspI	CGGWCCG	1 cut(s)	259
CviAII	CATG	2 cut(s)	146, 281
CviJI	RGCY	6 cut(s)	68, 76, 80, 265, 287, 300
CviKI_1	RGCY	6 cut(s)	68, 76, 80, 265, 287, 300
DdeI	CTNAG	1 cut(s)	156
DpnI	GATC	1 cut(s)	132
DpnII	GATC	1 cut(s)	130
EaeI	YGGCCR	1 cut(s)	263
Eam1104I	CTCTTC	1 cut(s)	323
EarI	CTCTTC	1 cut(s)	323
Eco130I	CCWWGG	1 cut(s)	273
Eco47I	GGWCC	1 cut(s)	259
EcoRII	CCWGG	1 cut(s)	289
EcoT14I	CCWWGG	1 cut(s)	273
ErhI	CCWWGG	1 cut(s)	273
FaeI	CATG	2 cut(s)	149, 284
FaiI	YATR	3 cut(s)	122, 147, 282
FatI	CATG	2 cut(s)	145, 280
Fnu4HI	GCNGC	3 cut(s)	153, 285, 298
Fsp4HI	GCNGC	3 cut(s)	153, 285, 298
FspBI	CTAG	1 cut(s)	340
GluI	GCNGC	3 cut(s)	153, 285, 298
GsuI	CTGGAG	1 cut(s)	312
HaeIII	GGCC	1 cut(s)	265
HapII	CCGG	1 cut(s)	262
Hin1II	CATG	2 cut(s)	149, 284
HpaII	CCGG	1 cut(s)	262
HphI	GGTGA	1 cut(s)	129
Hpy188I	TCNGA	2 cut(s)	109, 159
Hpy188III	TCNNGA	1 cut(s)	308
HpyAV	CCTTC	1 cut(s)	144
HpyCH4III	ACNGT	1 cut(s)	163
HpyCH4V	TGCA	2 cut(s)	98, 284
HpyF3I	CTNAG	1 cut(s)	156
Hsp92II	CATG	2 cut(s)	149, 284
Kzo9I	GATC	1 cut(s)	130
LmnI	GCTCC	2 cut(s)	73, 97
LpnPI	CCDG	9 cut(s)	90, 108, 174, 198, 228, 275, 276, 293, 303
Lsp1109I	GCAGC	2 cut(s)	139, 296
MaeI	CTAG	1 cut(s)	340
MaeIII	GTNAC	1 cut(s)	169
MalI	GATC	1 cut(s)	132
MboI	GATC	1 cut(s)	130
MboII	GAAGA	1 cut(s)	310
MnlI	CCTC	3 cut(s)	214, 287, 326
MseI	TTAA	2 cut(s)	84, 165
MspI	CCGG	1 cut(s)	262
MspR9I	CCNGG	1 cut(s)	291
MvaI	CCWGG	1 cut(s)	291
NdeII	GATC	1 cut(s)	130
NlaIII	CATG	2 cut(s)	149, 284
NspI	RCATGY	1 cut(s)	149
PciI	ACATGT	1 cut(s)	145
PkrI	GCNGC	3 cut(s)	154, 286, 299
PscI	ACATGT	1 cut(s)	145
Psp6I	CCWGG	1 cut(s)	289
PspGI	CCWGG	1 cut(s)	289
PspPI	GGNCC	1 cut(s)	259
PstNI	CAGNNNCTG	1 cut(s)	290
Rsr2I	CGGWCCG	1 cut(s)	259
RsrII	CGGWCCG	1 cut(s)	259
SaqAI	TTAA	2 cut(s)	84, 165
SatI	GCNGC	3 cut(s)	153, 285, 298
Sau3AI	GATC	1 cut(s)	130
Sau96I	GGNCC	1 cut(s)	259
ScrFI	CCNGG	1 cut(s)	291
SetI	ASST	5 cut(s)	25, 70, 187, 279, 318
SinI	GGWCC	1 cut(s)	259
SsiI	CCGC	3 cut(s)	60, 297, 330
SspMI	CTAG	1 cut(s)	340
StyD4I	CCNGG	1 cut(s)	289
StyI	CCWWGG	1 cut(s)	273
TaaI	ACNGT	1 cut(s)	163
TaqI	TCGA	2 cut(s)	223, 269
TauI	GCSGC	1 cut(s)	300
Tru1I	TTAA	2 cut(s)	84, 165
Tru9I	TTAA	2 cut(s)	84, 165
TseI	GCWGC	2 cut(s)	152, 284
TspDTI	ATGAA	1 cut(s)	269
TspGWI	ACGGA	1 cut(s)	272
VpaK11BI	GGWCC	1 cut(s)	259
XceI	RCATGY	1 cut(s)	149
XspI	CTAG	1 cut(s)	340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.