AT1G26640

Amino acid kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008655
Physical Location & Seq
Reverse (-)
9207383 .. 9209902
2520 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26640.1

Sequence Viewer

Length: 999 bp
ATGGAGCTGAATATTTCCGAGAGTCGAAGCAGATCAATTCGTTGCATTGTGAAACTTGGAGGTGCGGCAATTACTTGCAAAAACGAGCTGGAGAAGATTCACGATGAAAATCTGGAGGTCGTGGCGTGTCAGTTACGTCAAGCTATGTTGGAGGGTTCAGCTCCAAGCAAGGTTATTGGCATGGATTGGAGCAAGAGACCTGGAAGCTCTGAGATTTCTTGTGATGTGGATGACATAGGGGATCAAAAGTCTTCTGAGTTTAGTAAATTTGTTGTGGTTCATGGCGCTGGTTCCTTTGGGCACTTTCAGGCCAGTAGATCTGGGGTTCACAAAGGAGGACTTGAGAAACCTATTGTCAAAGCTGGTTTCGTTGCTACTCGTATATCTGTGACAAATCTTAATCTTGAAATTGTACGAGCACTAGCCCGAGAGGGCATTCCTACGATAGGCATGTCTCCATTTTCATGTGGTTGGTCAACCTCCAAAAGAGATGTGGCTTCTGCAGATCTAGCAACCGTAGCTAAAACCATAGACTCAGGATTTGTCCCTGTTCTCCATGGAGATGCAGTGCTGGACAATATACTGGGCTGCACCATATTGAGTGGTGATGTTATCATCCGTCATCTTGCAGATCATTTGAAGCCAGAATATGTTGTCTTTCTCACAGATGTACTAGGTGTCTACGATCGACCACCTTCACCTTCAGAGCCCGACGCTGTGCTCTTGAAAGAGATCGCTGTTGGAGAAGATGGAAGCTGGAAGGTTGTGAATCCACTGTTGGAGCACACAGACAAGAAAGTTGACTACTCTGTTGCGGCGCACGATACAACCGGTGGAATGGAAACGAAGATATCAGAAGCTGCTATGATTGCAAAACTTGGAGTCGATGTCTACATTGTGAAGGCTGCGACAACTCATTCACAGAGAGCACTAAACGGTGATTTGAGAGATAGTGTTCCTGAAGATTGGCTTGGTACTATCATCAGATTCTCAAAGTAG

Protein Analysis

332

Amino Acids

35.68

Weight (kDa)

5.71

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 86 - 300 1.1e-31 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 681, 891
AciI CCGC 2 cut(s) 65, 815
AclWI GGATC 1 cut(s) 249
AcsI RAATTY 1 cut(s) 266
AcuI CTGAAG 2 cut(s) 687, 981
AfaI GTAC 3 cut(s) 414, 672, 976
AfiI CCNNNNNNNGG 1 cut(s) 446
AgeI ACCGGT 1 cut(s) 830
AgsI TTSAA 3 cut(s) 407, 640, 727
AjnI CCWGG 1 cut(s) 199
AjuI GAANNNNNNNTTGG 4 cut(s) 761, 793, 954, 986
AluBI AGCT 9 cut(s) 7, 88, 143, 161, 207, 362, 521, 756, 860
AluI AGCT 9 cut(s) 7, 88, 143, 161, 207, 362, 521, 756, 860
Alw21I GWGCWC 4 cut(s) 421, 723, 786, 931
Alw26I GTCTC 2 cut(s) 190, 459
AlwI GGATC 1 cut(s) 249
AlwNI CAGNNNCTG 1 cut(s) 860
Ama87I CYCGRG 1 cut(s) 426
AoxI GGCC 1 cut(s) 309
ApeKI GCWGC 3 cut(s) 588, 860, 905
ApoI RAATTY 1 cut(s) 266
ArsI GACNNNNNNTTYG 2 cut(s) 524, 556
AsiGI ACCGGT 1 cut(s) 830
AspLEI GCGC 2 cut(s) 287, 820
AsuHPI GGTGA 3 cut(s) 617, 690, 950
AvaI CYCGRG 1 cut(s) 426
BaeGI GKGCMC 1 cut(s) 303
BanII GRGCYC 1 cut(s) 711
BbsI GAAGAC 1 cut(s) 243
Bbv12I GWGCWC 4 cut(s) 421, 723, 786, 931
BbvI GCAGC 3 cut(s) 575, 847, 892
BccI CCATC 1 cut(s) 743
BciT130I CCWGG 1 cut(s) 201
BcoDI GTCTC 2 cut(s) 190, 459
BfaI CTAG 3 cut(s) 422, 509, 674
BfmI CTRYAG 1 cut(s) 501
BfoI RGCGCY 1 cut(s) 288
BglII AGATCT 2 cut(s) 317, 505
BisI GCNGC 5 cut(s) 66, 589, 816, 861, 906
BlsI GCNGC 5 cut(s) 67, 590, 817, 862, 907
Bme1390I CCNGG 1 cut(s) 201
BmeT110I CYCGRG 1 cut(s) 426
BmiI GGNNCC 1 cut(s) 292
BmrFI CCNGG 1 cut(s) 201
BmrI ACTGGG 1 cut(s) 593
BmsI GCATC 1 cut(s) 553
BmuI ACTGGG 1 cut(s) 593
BpiI GAAGAC 1 cut(s) 243
BpmI CTGGAG 2 cut(s) 110, 134
BpuEI CTTGAG 1 cut(s) 362
BsaBI GATNNNNATC 1 cut(s) 108
BsaI GGTCTC 1 cut(s) 190
BsaJI CCNNGG 1 cut(s) 556
BsaWI WCCGGW 1 cut(s) 830
BsaXI ACNNNNNCTCC 4 cut(s) 552, 582, 873, 903
Bsc4I CCNNNNNNNGG 1 cut(s) 446
Bse118I RCCGGY 1 cut(s) 830
Bse1I ACTGG 2 cut(s) 312, 588
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 1 cut(s) 201
BseDI CCNNGG 1 cut(s) 556
BseGI GGATG 2 cut(s) 235, 615
BseJI GATNNNNATC 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 446
BseMII CTCAG 3 cut(s) 201, 246, 549
BseNI ACTGG 2 cut(s) 312, 588
BseSI GKGCMC 1 cut(s) 303
BseXI GCAGC 3 cut(s) 575, 847, 892
BsgI GTGCAG 1 cut(s) 574
Bsh1285I CGRYCG 1 cut(s) 688
BshFI GGCC 1 cut(s) 311
BshTI ACCGGT 1 cut(s) 830
BsiEI CGRYCG 1 cut(s) 688
BsiHKAI GWGCWC 4 cut(s) 421, 723, 786, 931
BsiHKCI CYCGRG 1 cut(s) 426
BsiSI CCGG 1 cut(s) 831
BslFI GGGAC 1 cut(s) 530
BslI CCNNNNNNNGG 1 cut(s) 446
BsmAI GTCTC 2 cut(s) 190, 459
BsmFI GGGAC 1 cut(s) 530
BsmI GAATGC 1 cut(s) 435
BsnI GGCC 1 cut(s) 311
Bso31I GGTCTC 1 cut(s) 190
BsoBI CYCGRG 1 cut(s) 426
Bsp1286I GDGCHC 6 cut(s) 303, 421, 711, 723, 786, 931
Bsp143I GATC 7 cut(s) 32, 241, 317, 505, 631, 685, 732
Bsp19I CCATGG 1 cut(s) 556
BspACI CCGC 2 cut(s) 65, 815
BspANI GGCC 1 cut(s) 311
BspCNI CTCAG 3 cut(s) 202, 247, 548
BspLI GGNNCC 1 cut(s) 292
BspMAI CTGCAG 1 cut(s) 505
BspPI GGATC 1 cut(s) 249
BspTNI GGTCTC 1 cut(s) 190
BsrFI RCCGGY 1 cut(s) 830
BsrI ACTGG 2 cut(s) 312, 588
BssAI RCCGGY 1 cut(s) 830
BssECI CCNNGG 1 cut(s) 556
BssMI GATC 7 cut(s) 32, 241, 317, 505, 631, 685, 732
BssT1I CCWWGG 1 cut(s) 556
Bst2UI CCWGG 1 cut(s) 201
Bst4CI ACNGT 3 cut(s) 517, 777, 938
BstDEI CTNAG 3 cut(s) 210, 255, 535
BstDSI CCRYGG 1 cut(s) 556
BstENI CCTNNNNNAGG 1 cut(s) 444
BstF5I GGATG 2 cut(s) 235, 615
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 2 cut(s) 287, 820
BstKTI GATC 7 cut(s) 35, 244, 320, 508, 634, 688, 735
BstMAI GTCTC 2 cut(s) 190, 459
BstMBI GATC 7 cut(s) 32, 241, 317, 505, 631, 685, 732
BstMCI CGRYCG 1 cut(s) 688
BstMWI GCNNNNNNNGC 3 cut(s) 509, 518, 869
BstNI CCWGG 1 cut(s) 201
BstNSI RCATGY 1 cut(s) 454
BstSCI CCNGG 1 cut(s) 199
BstSFI CTRYAG 1 cut(s) 501
BstSLI GKGCMC 1 cut(s) 303
BstV1I GCAGC 3 cut(s) 575, 847, 892
BstV2I GAAGAC 1 cut(s) 243
BstX2I RGATCY 2 cut(s) 317, 505
BstYI RGATCY 2 cut(s) 317, 505
BsuRI GGCC 1 cut(s) 311
BtgI CCRYGG 1 cut(s) 556
BtsCI GGATG 2 cut(s) 235, 615
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 2 cut(s) 573, 773
CaiI CAGNNNCTG 1 cut(s) 860
CfoI GCGC 2 cut(s) 287, 820
Cfr10I RCCGGY 1 cut(s) 830
CseI GACGC 1 cut(s) 722
Csp6I GTAC 3 cut(s) 413, 671, 975
CspAI ACCGGT 1 cut(s) 830
CviAII CATG 5 cut(s) 181, 281, 451, 465, 557
CviQI GTAC 3 cut(s) 413, 671, 975
DdeI CTNAG 3 cut(s) 210, 255, 535
DpnI GATC 7 cut(s) 34, 243, 319, 507, 633, 687, 734
DpnII GATC 7 cut(s) 32, 241, 317, 505, 631, 685, 732
Eco130I CCWWGG 1 cut(s) 556
Eco24I GRGCYC 1 cut(s) 711
Eco31I GGTCTC 1 cut(s) 190
Eco32I GATATC 1 cut(s) 852
Eco57I CTGAAG 2 cut(s) 687, 981
Eco88I CYCGRG 1 cut(s) 426
EcoNI CCTNNNNNAGG 1 cut(s) 444
EcoRII CCWGG 1 cut(s) 199
EcoRV GATATC 1 cut(s) 852
EcoT14I CCWWGG 1 cut(s) 556
EcoT38I GRGCYC 1 cut(s) 711
ErhI CCWWGG 1 cut(s) 556
FaeI CATG 5 cut(s) 184, 284, 454, 468, 560
FalI AAGNNNNNCTT 4 cut(s) 324, 356, 954, 986
FaqI GGGAC 1 cut(s) 530
FatI CATG 5 cut(s) 180, 280, 450, 464, 556
FblI GTMKAC 2 cut(s) 681, 891
Fnu4HI GCNGC 5 cut(s) 66, 589, 816, 861, 906
FokI GGATG 2 cut(s) 242, 602
FriOI GRGCYC 1 cut(s) 711
Fsp4HI GCNGC 5 cut(s) 66, 589, 816, 861, 906
FspBI CTAG 3 cut(s) 422, 509, 674
GlaI GCGC 2 cut(s) 286, 819
GluI GCNGC 5 cut(s) 66, 589, 816, 861, 906
GsuI CTGGAG 2 cut(s) 110, 134
HaeII RGCGCY 1 cut(s) 288
HaeIII GGCC 1 cut(s) 311
HapII CCGG 1 cut(s) 831
HgaI GACGC 1 cut(s) 722
HhaI GCGC 2 cut(s) 287, 820
Hin1II CATG 5 cut(s) 184, 284, 454, 468, 560
Hin6I GCGC 2 cut(s) 285, 818
HinP1I GCGC 2 cut(s) 285, 818
HincII GTYRAC 2 cut(s) 477, 802
HindII GTYRAC 2 cut(s) 477, 802
HinfI GANTC 6 cut(s) 22, 97, 533, 769, 882, 987
HpaII CCGG 1 cut(s) 831
HphI GGTGA 3 cut(s) 617, 690, 950
Hpy166II GTNNAC 5 cut(s) 328, 477, 682, 802, 892
Hpy188I TCNGA 6 cut(s) 19, 211, 256, 706, 856, 986
Hpy188III TCNNGA 6 cut(s) 101, 113, 404, 537, 724, 959
Hpy8I GTNNAC 5 cut(s) 328, 477, 682, 802, 892
Hpy99I CGWCG 1 cut(s) 716
HpyAV CCTTC 4 cut(s) 705, 711, 754, 895
HpyCH4III ACNGT 3 cut(s) 517, 777, 938
HpyCH4IV ACGT 1 cut(s) 136
HpyCH4V TGCA 7 cut(s) 45, 78, 503, 566, 591, 629, 872
HpyF10VI GCNNNNNNNGC 3 cut(s) 509, 518, 869
HpyF3I CTNAG 3 cut(s) 210, 255, 535
HpySE526I ACGT 1 cut(s) 136
Hsp92II CATG 5 cut(s) 184, 284, 454, 468, 560
HspAI GCGC 2 cut(s) 285, 818
Kzo9I GATC 7 cut(s) 32, 241, 317, 505, 631, 685, 732
LmnI GCTCC 4 cut(s) 4, 166, 189, 781
Lsp1109I GCAGC 3 cut(s) 575, 847, 892
LweI GCATC 1 cut(s) 553
MaeI CTAG 3 cut(s) 422, 509, 674
MaeII ACGT 1 cut(s) 136
MaeIII GTNAC 2 cut(s) 132, 388
MalI GATC 7 cut(s) 34, 243, 319, 507, 633, 687, 734
MboI GATC 7 cut(s) 32, 241, 317, 505, 631, 685, 732
MboII GAAGA 5 cut(s) 106, 243, 758, 859, 974
MflI RGATCY 2 cut(s) 317, 505
MhlI GDGCHC 6 cut(s) 303, 421, 711, 723, 786, 931
MluCI AATT 4 cut(s) 36, 69, 266, 408
MlyI GAGTC 3 cut(s) 31, 527, 891
MmeI TCCRAC 3 cut(s) 129, 721, 759
MnlI CCTC 6 cut(s) 53, 109, 145, 329, 424, 490
MseI TTAA 1 cut(s) 399
MslI CAYNNNNRTG 2 cut(s) 463, 561
MspI CCGG 1 cut(s) 831
MspR9I CCNGG 1 cut(s) 201
Mva1269I GAATGC 1 cut(s) 435
MvaI CCWGG 1 cut(s) 201
MwoI GCNNNNNNNGC 3 cut(s) 509, 518, 869
NcoI CCATGG 1 cut(s) 556
NdeII GATC 7 cut(s) 32, 241, 317, 505, 631, 685, 732
NlaIII CATG 5 cut(s) 184, 284, 454, 468, 560
NlaIV GGNNCC 1 cut(s) 292
NmuCI GTSAC 1 cut(s) 388
NspI RCATGY 1 cut(s) 454
PctI GAATGC 1 cut(s) 435
PfeI GAWTC 3 cut(s) 97, 769, 987
PinAI ACCGGT 1 cut(s) 830
PkrI GCNGC 5 cut(s) 67, 590, 817, 862, 907
Ple19I CGATCG 1 cut(s) 688
PleI GAGTC 3 cut(s) 30, 527, 890
PpsI GAGTC 3 cut(s) 30, 527, 890
Psp6I CCWGG 1 cut(s) 199
PspGI CCWGG 1 cut(s) 199
PspN4I GGNNCC 1 cut(s) 292
PstI CTGCAG 1 cut(s) 505
PstNI CAGNNNCTG 1 cut(s) 860
PsuI RGATCY 2 cut(s) 317, 505
PvuI CGATCG 1 cut(s) 688
RsaI GTAC 3 cut(s) 414, 672, 976
RsaNI GTAC 3 cut(s) 413, 671, 975
RseI CAYNNNNRTG 2 cut(s) 463, 561
SaqAI TTAA 1 cut(s) 399
SatI GCNGC 5 cut(s) 66, 589, 816, 861, 906
Sau3AI GATC 7 cut(s) 32, 241, 317, 505, 631, 685, 732
SchI GAGTC 3 cut(s) 31, 527, 891
ScrFI CCNGG 1 cut(s) 201
SduI GDGCHC 6 cut(s) 303, 421, 711, 723, 786, 931
SfaNI GCATC 1 cut(s) 553
SfcI CTRYAG 1 cut(s) 501
SmiMI CAYNNNNRTG 2 cut(s) 463, 561
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
Sse9I AATT 4 cut(s) 36, 69, 266, 408
SsiI CCGC 2 cut(s) 65, 815
SspI AATATT 1 cut(s) 13
SspMI CTAG 3 cut(s) 422, 509, 674
StyD4I CCNGG 1 cut(s) 199
StyI CCWWGG 1 cut(s) 556
TaaI ACNGT 3 cut(s) 517, 777, 938
TaiI ACGT 1 cut(s) 139
TaqI TCGA 3 cut(s) 25, 688, 885
TasI AATT 4 cut(s) 36, 69, 266, 408
TatI WGTACW 1 cut(s) 670
TauI GCSGC 2 cut(s) 68, 818
TfiI GAWTC 3 cut(s) 97, 769, 987
Tru1I TTAA 1 cut(s) 399
Tru9I TTAA 1 cut(s) 399
TscAI CASTG 2 cut(s) 573, 780
TseFI GTSAC 1 cut(s) 388
TseI GCWGC 3 cut(s) 588, 860, 905
Tsp45I GTSAC 1 cut(s) 388
TspDTI ATGAA 3 cut(s) 120, 269, 453
TspGWI ACGGA 1 cut(s) 608
TspRI CASTG 2 cut(s) 573, 780
XagI CCTNNNNNAGG 1 cut(s) 444
XapI RAATTY 1 cut(s) 266
XceI RCATGY 1 cut(s) 454
XcmI CCANNNNNNNNNTGG 1 cut(s) 490
XmiI GTMKAC 2 cut(s) 681, 891
XspI CTAG 3 cut(s) 422, 509, 674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.