Rorug04G0315200
WRKY Family

Protein of unknown function (DUF1336)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0002719
Physical Location & Seq
Forward (+)
49006758 .. 49014690
7933 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0315200.1

Sequence Viewer

Length: 2493 bp
ATGCATTTCGCAAAGCTCGATGATTCTCCTATGTTCCGCAAGCAGATACAGGGCATGGAGGACAGTGCCGAGTCATTGAGGGAGAGAAGTTTAAGGTTTTACAAAGGATGTCGAAAATACACTGAAGGTCTTGGGGAAGCTTATGATGGGGACATTGCTTTTGCTAGTGCCCTAGAAACATTTGGTGGGGGGCATAATGATCCAATTAGTGTTGCTTTTGGAGGCCCTGTTATGACCAAATTTACTATCGCATTAAGAGAAATTGGGACATACAAGGAAGTTCTTCGTTCCCAGGTTGAGCATATGCTAAATGACAGATTGTTACAATTTGTGAATTTTGATTTGCATGAGGTCAAGGAAGCACGAAAACGGTTTGACAAGGCTAGCCTTCTTTATGACCAGGCTCGCGAAAAATTTCTCTCACTGAGAAAAGGAACAAGGAATGATGTAGCCACCATGGTAGAGGAGGAGCTTCATAATGCAAGGTCTACATTTGAGCAAGCTCGTTTTAGTCTTGTGACTGCTCTTTCTACTGTTGAAGCAAAAAAGAGGTTTGAGTTTCTGGAAGCGGTCAGTGGGACAATGGATGCCCATCTTCGTTACTTCAAACAGGGTTATGAGTTGTTGCATCAAATGGAACCCTATATTAATCAGGTCTTGACTTATGCTCAACAGTCAAGAGAAAGATCCAACTATGAACAGGCAGCTCTTAATGAAAGGATGCAAGATTACAAAAGACAGGTCGATAGAGAGAGTAGGTGGTCGTCCAATGGTTCTAATGGGTCTCCTAATGGAGATGGGATACAAGCTATTGGTAGAAGTTCACATAAAATGATCGAGGCTGTTATGCAATCTGCTGCAAAGGGAAAGGTTCAAACCATTAGGCAAGGTTATCTCTCAAAGAGGTCCTCAAACTTGAGGGGTGACTGGAAAAGAAGATTTTTTGTACTTGATAGCCGAGGAATGCTCTATTACTATCGGAAACAAATCAGCAAATCATCTGGCTCTGGTAGTCAACTTTCTGGTCAGAGGAATAGTTCTGAGCTTGGTTCTGGACTGTTGAGTCGCTGGCTTTCTTCTCATTATCATGGTGGAGTGCATGATGAGAAATCTGTTGCTCATCACACAGTGAATCTGCTTACATCAACAATCAAAGTTGACGCTGACCAGTCGGACCTAAGATTTTGTTTCAGGATCATTTCACCAACAAAGAACTATACTTTGCAGGCAGAGAGCGCACTTGATCAAATGGATTGGATTGAAAAGATAACGGGGGTTATTGCTTCATTACTTAGCTCTCAGGCTCCTGAGAGGTTTCTGCCTGCTAGTCCCATGGGAAGCCATCGTCGTTCTGCCAGTGAGAGTAGTTCGTTTGAGAGTTCTGATTTTGATCACACTGCAGTTGAAGAACTTGCATCGGACAGAAGCCTGAATAATGCTGACCACCGCCAATTAAGAAGTTCGCAACAGCAACGGTCTTCTTTAAGAAGTGAGAAGACAATTGACACTCTACGACGAGTATGTGGGAATGATAAATGTGCTGATTGTGGTGCCCCTGAGCCAGATTGGGCATCATTAAATCTTGGCGTTCTTGTTTGCATCGAATGTTCTGGTGTTCATCGTAATCTTGGTGTTCATATCTCAAAGGTAAGGTCTCTGACACTGGATGTCAAAGTATGGGAGCCTTCTGTCATTAATTTGTTTCAGTCATTGGGTAATGCCTTTGCAAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCTTTTCAGCTTGATCTTATAGCCACAGGGTCACATAAATCTGATAAAACACAGCTAGTTTTTATCAGCAAACCCAATCAGACTGATTCAATATCGGTAAAGGAGAAATTCATTCATGCAAAGTACGCAGACAAGCTTTTTGTAAGGAGGCCAAAGGATGGACAGTATACTCATTTAGTGGCACAACAGATTTGGGAGGGTGTTCGTGCTAATGACAAGAAAGCTGTGTATCGTCACATTGTTAATTCTGAACCAGACGTGAATGCGGTGTATGAGCAAGCCTCGTGTGGCTCTTCCTTAACCCTTGCAAAAGTAATGCTGATGCAAGAGCAGACTAGCCATGACCAAAGCTCTAGCTGCTTAGCTGGGGATTCATTGGAGAGGTCTTCTGGTAGTTCTTCAAACTTGAGTGGTACAAGTGAAGTCCAGGCTATGGAGGATCTCGACGGGTGCACCCTTCTTCACCTTGCTTGTGAAACTGCAGACATTGGTATGCTTGAACTGCTCCTACAATATGGAGCAAATGTAAATGCGACTGATTCAAGAGGTCAAACACCACTCGACCGATGTATTCTCAAGGGCAGAAACACATTTGCAAAATTGCTTCTTACAAGGGGAGCGGATCCACGAGCACTAAATGGGGAAGGTAAAACCCCCCTTGAGCTGGCAGTTGAGTCGAACTTTGATGATGGCGAGGTCCTTTCTATATTATCAGACTCGCGTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1336

Protein Analysis

830

Amino Acids

92.73

Weight (kDa)

6.94

Isoelectric Point (pI)

54.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAR_3 PF16746 6 - 235 2.9e-39 BAR domain of APPL family
BAR PF03114 53 - 216 2.9e-12 BAR domain
PH PF00169 294 - 427 8.7e-12 PH domain
ArfGap PF01412 499 - 637 5e-32 Putative GTPase activating protein for Arf
Ank_2 PF12796 734 - 798 3.4e-10 Ankyrin repeats (3 copies)
Ank_5 PF13857 735 - 777 1.1e-07 Ankyrin repeats (many copies)
Ank PF00023 737 - 768 4.5e-07 Ankyrin repeat
Ank_4 PF13637 742 - 791 5e-07 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1062
AccB1I GGYRCC 1 cut(s) 1550
AccB7I CCANNNNNTGG 2 cut(s) 1922, 2197
AccBSI CCGCTC 1 cut(s) 2384
AccI GTMKAC 2 cut(s) 488, 1931
AccII CGCG 2 cut(s) 408, 2485
AciI CCGC 5 cut(s) 37, 569, 1447, 2030, 2384
AclWI GGATC 6 cut(s) 194, 681, 1202, 2211, 2381, 2394
AcsI RAATTY 4 cut(s) 239, 334, 413, 1871
AcuI CTGAAG 1 cut(s) 144
AdeI CACNNNGTG 1 cut(s) 1129
AfaI GTAC 3 cut(s) 948, 1889, 2179
AfiI CCNNNNNNNGG 3 cut(s) 1922, 2197, 2428
AgsI TTSAA 9 cut(s) 539, 607, 875, 1262, 1406, 1854, 2166, 2264, 2307
AjiI CACGTC 1 cut(s) 2023
AjnI CCWGG 3 cut(s) 291, 399, 2190
Alw21I GWGCWC 2 cut(s) 2219, 2398
Alw26I GTCTC 2 cut(s) 789, 1659
Alw44I GTGCAC 1 cut(s) 2215
AlwI GGATC 6 cut(s) 194, 681, 1202, 2211, 2381, 2394
AoxI GGCC 2 cut(s) 223, 1913
ApaLI GTGCAC 1 cut(s) 2215
ApeKI GCWGC 3 cut(s) 704, 857, 2121
ApoI RAATTY 4 cut(s) 239, 334, 413, 1871
ArsI GACNNNNNNTTYG 8 cut(s) 143, 175, 726, 758, 1637, 1669, 1886, 1918
AseI ATTAAT 2 cut(s) 648, 1695
Asp700I GAANNNNTTC 2 cut(s) 282, 414
AspLEI GCGC 1 cut(s) 1238
AspS9I GGNCC 4 cut(s) 224, 906, 1174, 2461
AsuHPI GGTGA 3 cut(s) 935, 1194, 2219
AsuNHI GCTAGC 1 cut(s) 383
AvaII GGWCC 3 cut(s) 906, 1174, 2461
BaeGI GKGCMC 3 cut(s) 172, 1555, 2219
BamHI GGATCC 1 cut(s) 2386
BanI GGYRCC 1 cut(s) 1550
BauI CACGAG 2 cut(s) 2047, 2391
BbsI GAAGAC 3 cut(s) 1470, 1502, 2142
Bbv12I GWGCWC 2 cut(s) 2219, 2398
BbvI GCAGC 3 cut(s) 716, 844, 2108
BccI CCATC 6 cut(s) 140, 600, 791, 1350, 1916, 2447
BcgI CGANNNNNNTGC 2 cut(s) 2421, 2455
BciT130I CCWGG 3 cut(s) 293, 401, 2192
BciVI GTATCC 1 cut(s) 795
BclI TGATCA 2 cut(s) 1243, 1390
BcoDI GTCTC 2 cut(s) 789, 1659
BfaI CTAG 7 cut(s) 165, 173, 384, 1326, 1820, 2100, 2118
BfmI CTRYAG 2 cut(s) 1398, 2244
BfuI GTATCC 1 cut(s) 795
BisI GCNGC 3 cut(s) 705, 858, 2122
BlpI GCTNAGC 1 cut(s) 2125
BlsI GCNGC 3 cut(s) 706, 859, 2123
Bme1390I CCNGG 3 cut(s) 293, 401, 2192
Bme18I GGWCC 3 cut(s) 906, 1174, 2461
BmgBI CACGTC 1 cut(s) 2023
BmgT120I GGNCC 4 cut(s) 224, 906, 1174, 2461
BmiI GGNNCC 5 cut(s) 639, 1305, 1552, 1683, 2388
BmrFI CCNGG 3 cut(s) 293, 401, 2192
BmsI GCATC 7 cut(s) 577, 637, 711, 1424, 1580, 1608, 2076
BmtI GCTAGC 1 cut(s) 387
BpiI GAAGAC 3 cut(s) 1470, 1502, 2142
BplI GAGNNNNNCTC 4 cut(s) 951, 983, 2030, 2062
Bpu10I CCTNAGC 1 cut(s) 1557
Bpu1102I GCTNAGC 1 cut(s) 2125
BpuEI CTTGAG 4 cut(s) 937, 2191, 2324, 2444
BsaBI GATNNNNATC 2 cut(s) 591, 1389
BsaI GGTCTC 2 cut(s) 789, 1659
BsaJI CCNNGG 4 cut(s) 291, 456, 958, 1332
BsaXI ACNNNNNCTCC 4 cut(s) 213, 243, 2274, 2304
Bsc4I CCNNNNNNNGG 3 cut(s) 1922, 2197, 2428
Bse1I ACTGG 4 cut(s) 932, 1168, 1356, 1668
Bse3DI GCAATG 1 cut(s) 153
Bse8I GATNNNNATC 2 cut(s) 591, 1389
BseBI CCWGG 3 cut(s) 293, 401, 2192
BseDI CCNNGG 4 cut(s) 291, 456, 958, 1332
BseGI GGATG 5 cut(s) 113, 592, 726, 1672, 1927
BseJI GATNNNNATC 2 cut(s) 591, 1389
BseLI CCNNNNNNNGG 3 cut(s) 1922, 2197, 2428
BseMI GCAATG 1 cut(s) 153
BseMII CTCAG 5 cut(s) 416, 1032, 1299, 1313, 1548
BseNI ACTGG 4 cut(s) 932, 1168, 1356, 1668
BseRI GAGGAG 2 cut(s) 479, 482
BseSI GKGCMC 3 cut(s) 172, 1555, 2219
BseXI GCAGC 3 cut(s) 716, 844, 2108
BseYI CCCAGC 1 cut(s) 2129
Bsh1236I CGCG 2 cut(s) 408, 2485
Bsh1285I CGRYCG 1 cut(s) 2329
BshFI GGCC 2 cut(s) 225, 1915
BshNI GGYRCC 1 cut(s) 1550
BsiEI CGRYCG 1 cut(s) 2329
BsiHKAI GWGCWC 2 cut(s) 2219, 2398
BslFI GGGAC 4 cut(s) 164, 280, 592, 1314
BslI CCNNNNNNNGG 3 cut(s) 1922, 2197, 2428
BsmAI GTCTC 2 cut(s) 789, 1659
BsmFI GGGAC 4 cut(s) 164, 280, 592, 1314
BsmI GAATGC 2 cut(s) 969, 2032
BsnI GGCC 2 cut(s) 225, 1915
Bso31I GGTCTC 2 cut(s) 789, 1659
Bsp1286I GDGCHC 4 cut(s) 172, 1555, 2219, 2398
Bsp143I GATC 9 cut(s) 199, 686, 834, 1194, 1243, 1390, 1777, 2203, 2386
Bsp1720I GCTNAGC 1 cut(s) 2125
Bsp19I CCATGG 2 cut(s) 456, 1332
Bsp68I TCGCGA 1 cut(s) 408
BspACI CCGC 5 cut(s) 37, 569, 1447, 2030, 2384
BspANI GGCC 2 cut(s) 225, 1915
BspCNI CTCAG 5 cut(s) 417, 1033, 1300, 1312, 1549
BspFNI CGCG 2 cut(s) 408, 2485
BspLI GGNNCC 5 cut(s) 639, 1305, 1552, 1683, 2388
BspMAI CTGCAG 2 cut(s) 1402, 2248
BspOI GCTAGC 1 cut(s) 387
BspPI GGATC 6 cut(s) 194, 681, 1202, 2211, 2381, 2394
BspQI GCTCTTC 1 cut(s) 2062
BspT107I GGYRCC 1 cut(s) 1550
BspTNI GGTCTC 2 cut(s) 789, 1659
BsrBI CCGCTC 1 cut(s) 2384
BsrDI GCAATG 1 cut(s) 153
BsrI ACTGG 4 cut(s) 932, 1168, 1356, 1668
BssECI CCNNGG 4 cut(s) 291, 456, 958, 1332
BssMI GATC 9 cut(s) 199, 686, 834, 1194, 1243, 1390, 1777, 2203, 2386
BssNAI GTATAC 1 cut(s) 1932
BssSI CACGAG 2 cut(s) 2047, 2391
BssT1I CCWWGG 2 cut(s) 456, 1332
Bst1107I GTATAC 1 cut(s) 1932
Bst2BI CACGAG 2 cut(s) 2047, 2391
Bst2UI CCWGG 3 cut(s) 293, 401, 2192
Bst4CI ACNGT 8 cut(s) 65, 372, 535, 675, 1059, 1129, 1476, 1929
Bst6I CTCTTC 1 cut(s) 2062
BstC8I GCNNGC 9 cut(s) 41, 385, 406, 501, 1070, 1227, 1323, 2043, 2430
BstDEI CTNAG 8 cut(s) 425, 1041, 1178, 1292, 1299, 1308, 1557, 2125
BstDSI CCRYGG 2 cut(s) 456, 1332
BstF5I GGATG 5 cut(s) 113, 592, 726, 1672, 1927
BstFNI CGCG 2 cut(s) 408, 2485
BstHHI GCGC 1 cut(s) 1238
BstKTI GATC 9 cut(s) 202, 689, 837, 1197, 1246, 1393, 1780, 2206, 2389
BstMAI GTCTC 2 cut(s) 789, 1659
BstMBI GATC 9 cut(s) 199, 686, 834, 1194, 1243, 1390, 1777, 2203, 2386
BstMCI CGRYCG 1 cut(s) 2329
BstMWI GCNNNNNNNGC 4 cut(s) 1235, 1889, 2121, 2266
BstNI CCWGG 3 cut(s) 293, 401, 2192
BstSCI CCNGG 3 cut(s) 291, 399, 2190
BstSFI CTRYAG 2 cut(s) 1398, 2244
BstSLI GKGCMC 3 cut(s) 172, 1555, 2219
BstUI CGCG 2 cut(s) 408, 2485
BstV1I GCAGC 3 cut(s) 716, 844, 2108
BstV2I GAAGAC 3 cut(s) 1470, 1502, 2142
BstX2I RGATCY 3 cut(s) 686, 2203, 2386
BstYI RGATCY 3 cut(s) 686, 2203, 2386
BstZ17I GTATAC 1 cut(s) 1932
BsuI GTATCC 1 cut(s) 795
BsuRI GGCC 2 cut(s) 225, 1915
BtgI CCRYGG 2 cut(s) 456, 1332
BtrI CACGTC 1 cut(s) 2023
BtsCI GGATG 5 cut(s) 113, 592, 726, 1672, 1927
BtsI GCAGTG 1 cut(s) 1395
BtsIMutI CAGTG 8 cut(s) 70, 120, 422, 580, 1134, 1363, 1395, 1661
BtuMI TCGCGA 1 cut(s) 408
Cac8I GCNNGC 9 cut(s) 41, 385, 406, 501, 1070, 1227, 1323, 2043, 2430
CfoI GCGC 1 cut(s) 1238
Cfr13I GGNCC 4 cut(s) 224, 906, 1174, 2461
CseI GACGC 1 cut(s) 1169
Csp6I GTAC 3 cut(s) 947, 1888, 2178
CviAII CATG 8 cut(s) 55, 347, 457, 1088, 1100, 1333, 1880, 2105
CviQI GTAC 3 cut(s) 947, 1888, 2178
DdeI CTNAG 8 cut(s) 425, 1041, 1178, 1292, 1299, 1308, 1557, 2125
DpnI GATC 9 cut(s) 201, 688, 836, 1196, 1245, 1392, 1779, 2205, 2388
DpnII GATC 9 cut(s) 199, 686, 834, 1194, 1243, 1390, 1777, 2203, 2386
DraIII CACNNNGTG 1 cut(s) 1129
DrdI GACNNNNNNGTC 1 cut(s) 1062
DseDI GACNNNNNNGTC 1 cut(s) 1062
Eam1104I CTCTTC 1 cut(s) 2062
EarI CTCTTC 1 cut(s) 2062
Eco130I CCWWGG 2 cut(s) 456, 1332
Eco31I GGTCTC 2 cut(s) 789, 1659
Eco47I GGWCC 3 cut(s) 906, 1174, 2461
Eco57I CTGAAG 1 cut(s) 144
EcoO109I RGGNCCY 3 cut(s) 224, 906, 2461
EcoRII CCWGG 3 cut(s) 291, 399, 2190
EcoT14I CCWWGG 2 cut(s) 456, 1332
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 456, 1332
FaeI CATG 8 cut(s) 58, 350, 460, 1091, 1103, 1336, 1883, 2108
FalI AAGNNNNNCTT 2 cut(s) 1750, 1782
FaqI GGGAC 4 cut(s) 164, 280, 592, 1314
FatI CATG 8 cut(s) 54, 346, 456, 1087, 1099, 1332, 1879, 2104
FauNDI CATATG 1 cut(s) 303
FbaI TGATCA 2 cut(s) 1243, 1390
FblI GTMKAC 2 cut(s) 488, 1931
Fnu4HI GCNGC 3 cut(s) 705, 858, 2122
FokI GGATG 5 cut(s) 120, 599, 733, 1679, 1934
Fsp4HI GCNGC 3 cut(s) 705, 858, 2122
FspBI CTAG 7 cut(s) 165, 173, 384, 1326, 1820, 2100, 2118
GlaI GCGC 1 cut(s) 1237
GluI GCNGC 3 cut(s) 705, 858, 2122
GsaI CCCAGC 1 cut(s) 2133
HaeIII GGCC 2 cut(s) 225, 1915
HgaI GACGC 1 cut(s) 1169
HhaI GCGC 1 cut(s) 1238
Hin1II CATG 8 cut(s) 58, 350, 460, 1091, 1103, 1336, 1883, 2108
Hin6I GCGC 1 cut(s) 1236
HinP1I GCGC 1 cut(s) 1236
HincII GTYRAC 2 cut(s) 1016, 1159
HindII GTYRAC 2 cut(s) 1016, 1159
HindIII AAGCTT 2 cut(s) 138, 1898
HinfI GANTC 9 cut(s) 23, 71, 1063, 1132, 1850, 2135, 2303, 2438, 2480
HphI GGTGA 3 cut(s) 935, 1194, 2219
Hpy166II GTNNAC 6 cut(s) 489, 824, 1016, 1159, 1932, 2217
Hpy8I GTNNAC 6 cut(s) 489, 824, 1016, 1159, 1932, 2217
Hpy99I CGWCG 3 cut(s) 1350, 1518, 2213
HpyAV CCTTC 5 cut(s) 119, 398, 1695, 2231, 2402
HpyCH4III ACNGT 8 cut(s) 65, 372, 535, 675, 1059, 1129, 1476, 1929
HpyCH4IV ACGT 1 cut(s) 2022
HpyF10VI GCNNNNNNNGC 4 cut(s) 1235, 1889, 2121, 2266
HpyF3I CTNAG 8 cut(s) 425, 1041, 1178, 1292, 1299, 1308, 1557, 2125
HpySE526I ACGT 1 cut(s) 2022
Hsp92II CATG 8 cut(s) 58, 350, 460, 1091, 1103, 1336, 1883, 2108
HspAI GCGC 1 cut(s) 1236
Ksp22I TGATCA 2 cut(s) 1243, 1390
Kzo9I GATC 9 cut(s) 199, 686, 834, 1194, 1243, 1390, 1777, 2203, 2386
LguI GCTCTTC 1 cut(s) 2062
LmnI GCTCC 6 cut(s) 469, 1309, 1681, 2274, 2282, 2381
Lsp1109I GCAGC 3 cut(s) 716, 844, 2108
LweI GCATC 7 cut(s) 577, 637, 711, 1424, 1580, 1608, 2076
MaeI CTAG 7 cut(s) 165, 173, 384, 1326, 1820, 2100, 2118
MaeII ACGT 1 cut(s) 2022
MaeIII GTNAC 6 cut(s) 321, 517, 599, 923, 1794, 1997
MalI GATC 9 cut(s) 201, 688, 836, 1196, 1245, 1392, 1779, 2205, 2388
MbiI CCGCTC 1 cut(s) 2384
MboI GATC 9 cut(s) 199, 686, 834, 1194, 1243, 1390, 1777, 2203, 2386
MfeI CAATTG 1 cut(s) 1500
MflI RGATCY 3 cut(s) 686, 2203, 2386
MhlI GDGCHC 4 cut(s) 172, 1555, 2219, 2398
MlyI GAGTC 4 cut(s) 80, 1072, 2447, 2474
MmeI TCCRAC 2 cut(s) 714, 1152
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 282, 414
MslI CAYNNNNRTG 2 cut(s) 1086, 2255
MspR9I CCNGG 3 cut(s) 293, 401, 2192
MunI CAATTG 1 cut(s) 1500
Mva1269I GAATGC 2 cut(s) 969, 2032
MvaI CCWGG 3 cut(s) 293, 401, 2192
MvnI CGCG 2 cut(s) 408, 2485
MwoI GCNNNNNNNGC 4 cut(s) 1235, 1889, 2121, 2266
NcoI CCATGG 2 cut(s) 456, 1332
NdeI CATATG 1 cut(s) 303
NdeII GATC 9 cut(s) 199, 686, 834, 1194, 1243, 1390, 1777, 2203, 2386
NheI GCTAGC 1 cut(s) 383
NlaIII CATG 8 cut(s) 58, 350, 460, 1091, 1103, 1336, 1883, 2108
NlaIV GGNNCC 5 cut(s) 639, 1305, 1552, 1683, 2388
NmeAIII GCCGAG 2 cut(s) 94, 983
NmuCI GTSAC 4 cut(s) 517, 923, 1794, 1997
NruI TCGCGA 1 cut(s) 408
NsiI ATGCAT 1 cut(s) 6
PciSI GCTCTTC 1 cut(s) 2062
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PctI GAATGC 2 cut(s) 969, 2032
PdmI GAANNNNTTC 2 cut(s) 282, 414
PfeI GAWTC 5 cut(s) 23, 1132, 1850, 2135, 2303
PflMI CCANNNNNTGG 2 cut(s) 1922, 2197
PkrI GCNGC 3 cut(s) 706, 859, 2123
PleI GAGTC 4 cut(s) 79, 1071, 2446, 2474
PpsI GAGTC 4 cut(s) 79, 1071, 2446, 2474
PpuMI RGGWCCY 2 cut(s) 906, 2461
PshBI ATTAAT 2 cut(s) 648, 1695
Psp5II RGGWCCY 2 cut(s) 906, 2461
Psp6I CCWGG 3 cut(s) 291, 399, 2190
PspFI CCCAGC 1 cut(s) 2129
PspGI CCWGG 3 cut(s) 291, 399, 2190
PspN4I GGNNCC 5 cut(s) 639, 1305, 1552, 1683, 2388
PspPI GGNCC 4 cut(s) 224, 906, 1174, 2461
PspPPI RGGWCCY 2 cut(s) 906, 2461
PsrI GAACNNNNNNTAC 2 cut(s) 2256, 2288
PstI CTGCAG 2 cut(s) 1402, 2248
PsuI RGATCY 3 cut(s) 686, 2203, 2386
RruI TCGCGA 1 cut(s) 408
RsaI GTAC 3 cut(s) 948, 1889, 2179
RsaNI GTAC 3 cut(s) 947, 1888, 2178
RseI CAYNNNNRTG 2 cut(s) 1086, 2255
SapI GCTCTTC 1 cut(s) 2062
SatI GCNGC 3 cut(s) 705, 858, 2122
Sau3AI GATC 9 cut(s) 199, 686, 834, 1194, 1243, 1390, 1777, 2203, 2386
Sau96I GGNCC 4 cut(s) 224, 906, 1174, 2461
SchI GAGTC 4 cut(s) 80, 1072, 2447, 2474
ScrFI CCNGG 3 cut(s) 293, 401, 2192
SduI GDGCHC 4 cut(s) 172, 1555, 2219, 2398
SfaNI GCATC 7 cut(s) 577, 637, 711, 1424, 1580, 1608, 2076
SfcI CTRYAG 2 cut(s) 1398, 2244
SinI GGWCC 3 cut(s) 906, 1174, 2461
SmiMI CAYNNNNRTG 2 cut(s) 1086, 2255
SmlI CTYRAG 4 cut(s) 916, 2170, 2339, 2423
SmoI CTYRAG 4 cut(s) 916, 2170, 2339, 2423
SsiI CCGC 5 cut(s) 37, 569, 1447, 2030, 2384
SspMI CTAG 7 cut(s) 165, 173, 384, 1326, 1820, 2100, 2118
StyD4I CCNGG 3 cut(s) 291, 399, 2190
StyI CCWWGG 2 cut(s) 456, 1332
TaaI ACNGT 8 cut(s) 65, 372, 535, 675, 1059, 1129, 1476, 1929
TaiI ACGT 1 cut(s) 2025
TaqI TCGA 8 cut(s) 18, 112, 744, 837, 1602, 2208, 2325, 2441
TaqII GACCGA 1 cut(s) 2343
TatI WGTACW 1 cut(s) 946
TfiI GAWTC 5 cut(s) 23, 1132, 1850, 2135, 2303
TscAI CASTG 8 cut(s) 70, 127, 429, 580, 1134, 1363, 1402, 1668
TseFI GTSAC 4 cut(s) 517, 923, 1794, 1997
TseI GCWGC 3 cut(s) 704, 857, 2121
Tsp45I GTSAC 4 cut(s) 517, 923, 1794, 1997
TspDTI ATGAA 9 cut(s) 464, 711, 729, 1275, 1607, 1625, 1864, 1868, 2127
TspRI CASTG 8 cut(s) 70, 127, 429, 580, 1134, 1363, 1402, 1668
Van91I CCANNNNNTGG 2 cut(s) 1922, 2197
VneI GTGCAC 1 cut(s) 2215
VpaK11BI GGWCC 3 cut(s) 906, 1174, 2461
VspI ATTAAT 2 cut(s) 648, 1695
XapI RAATTY 4 cut(s) 239, 334, 413, 1871
XmiI GTMKAC 2 cut(s) 488, 1931
XmnI GAANNNNTTC 2 cut(s) 282, 414
XspI CTAG 7 cut(s) 165, 173, 384, 1326, 1820, 2100, 2118
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.