Prupe.1G280600_v2.0.a1

Protein of unknown function (DUF1336)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
28413434 .. 28417586
4153 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G280600.2

Sequence Viewer

Length: 1452 bp
ATGGGTGTCTGTGTTTCAAAACCTCATGCAACTATTAAAGCCCAGCAGAAAAGGGTCCGCAGAGTTGCCAGACGCCGGGGGAGGAAGATGAAGAAGGTTGTCACGTCCAATTCTGATGCAGCTACGAGACGGTCTGTTAGTGAGTTTGTACATCTTGACTTTGAGAAAGGTGCTGCAACTACCTGCAAGAGATCTGAGGTTTCTAGTGGCACATTTCACCTCACTCAGCTTCAATGGAACCACAGTCAGATTGATGGAAATGGTGGAAAATGCCCAGGGGAAGCATGGTTTGACTCCCTTAGTATTATGGAATCTGATTCAGAAGATGACTTCTGCAGTGTGCATGGAGATGGATTTCCTTTAGCAGGTAATATCCCAAATGGTCAATTGGTCCAGTATGAAAGTGCGTCATGCATTGTAGATAGTGGATGCAAGTATGAGGGGTTCTATGAAAGTTACCTGAAAATAGATGGAAATGCACGCCATTCGGTCGAGAAAACCCAAGTCAGTTTCAATGACAAGAACCCTAAGCAACCGGCAGTTATCATGCTTTCTTATAAGAGGAAATCCATCGACGAAAGTGAAAAGACCGGTGCGTCTGATCATAAATACTTATTTCGCCCAAGAGCAGGACTTCGCATTCCTTGTTCAACCGATGAGAAGCCAAGTCCTGGATCCTGGTCTGCAGTTCCACCTTCAGTATTTAAGCTCCGTGGCGAGAATTATTTCAAAGATAAACAGAAGTACCCTGCTCCAAACTACAGCTCATACGTACCAATTGGTGTTGATTTGTTTATCTGCCCCCGAAAGAGAGATCACATTGCTCAGCATCTTGAGCTTCCTTCTGTAAAACCACATGACAAAGTTCCTTCCCTCCTGATTGTTAATATACAGTTGCCTACTTATCCTACCACAATGTTCCTTGGTGATTGCGACGGGGAAGGCATGAGTCTTGTATTGTATTTTAAAGTGAATGAAAATTTTGACAAAGAGATATCTGCTCAGTTTCAAGACAGCATCAGGAAATTTGTTGAGGACGAGACAGAAAAAGTAAAAGGGTTTGCAAAGGATTCAGTGGTTCCTTTCAGGGAAAGGCTAAAAATCATGGCTGGATTGGTCAATCCAGATGACCTCCAGTTGAGTTCTGCAGAAAGGAAGCTTCTATCTGCTTATAATGATAAGCCTGTGCTTTCCCGTCCTCAACACAATTTCTACAGGGGACCTAATTACTTTGAGATTGACCTAGATATCCATAGGTTCAGCTACATATCCAGGAAAGGACTTGAATCATTCAGAGAGCGTTTGACCAACGGCGTGCTTGATTTGGGATTAACAATCCAGGCACAAAAACAAGAGGAATTACCAGAGCAAGTCTTGTGCTGCCTGCGCTTGAATAAGATGGAATTTGTGAACCATGGTCAAATACCTACGCTTGTAACTATGGATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

484

Amino Acids

54.62

Weight (kDa)

8.47

Isoelectric Point (pI)

44.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 558, 1173
AasI GACNNNNNNGTC 1 cut(s) 595
Acc36I ACCTGC 2 cut(s) 191, 356
AccB7I CCANNNNNTGG 1 cut(s) 671
AciI CCGC 1 cut(s) 58
AclWI GGATC 2 cut(s) 669, 682
AcsI RAATTY 3 cut(s) 979, 1025, 1403
AcuI CTGAAG 1 cut(s) 681
AcyI GRCGYC 1 cut(s) 73
AfaI GTAC 3 cut(s) 150, 746, 774
AfiI CCNNNNNNNGG 4 cut(s) 75, 365, 629, 671
AgeI ACCGGT 1 cut(s) 590
AgsI TTSAA 8 cut(s) 18, 233, 514, 651, 730, 1010, 1286, 1393
AjiI CACGTC 1 cut(s) 105
AjnI CCWGG 5 cut(s) 274, 670, 677, 1271, 1338
AluBI AGCT 7 cut(s) 122, 229, 709, 765, 838, 1159, 1263
AluI AGCT 7 cut(s) 122, 229, 709, 765, 838, 1159, 1263
Alw26I GTCTC 2 cut(s) 121, 1034
AlwI GGATC 2 cut(s) 669, 682
ApeKI GCWGC 3 cut(s) 119, 173, 1380
ApoI RAATTY 3 cut(s) 979, 1025, 1403
AsiGI ACCGGT 1 cut(s) 590
Asp700I GAANNNNTTC 1 cut(s) 725
AspLEI GCGC 1 cut(s) 1389
AspS9I GGNCC 3 cut(s) 55, 391, 1220
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 2 cut(s) 209, 938
AvaII GGWCC 3 cut(s) 55, 391, 1220
BaeI ACNNNNGTAYC 2 cut(s) 728, 761
BamHI GGATCC 1 cut(s) 674
BbvI GCAGC 3 cut(s) 131, 160, 1367
BccI CCATC 5 cut(s) 248, 344, 464, 578, 1393
BceAI ACGGC 1 cut(s) 1327
BcgI CGANNNNNNTGC 2 cut(s) 468, 502
BciT130I CCWGG 5 cut(s) 276, 672, 679, 1273, 1340
BclI TGATCA 1 cut(s) 601
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 2 cut(s) 121, 1034
BfaI CTAG 2 cut(s) 204, 1244
BfmI CTRYAG 5 cut(s) 334, 684, 760, 1146, 1213
BfuAI ACCTGC 2 cut(s) 191, 356
BglII AGATCT 1 cut(s) 191
BisI GCNGC 3 cut(s) 120, 174, 1381
BlpI GCTNAGC 1 cut(s) 825
BlsI GCNGC 3 cut(s) 121, 175, 1382
Bme1390I CCNGG 6 cut(s) 77, 276, 672, 679, 1273, 1340
Bme18I GGWCC 3 cut(s) 55, 391, 1220
BmgBI CACGTC 1 cut(s) 105
BmgT120I GGNCC 3 cut(s) 55, 391, 1220
BmiI GGNNCC 5 cut(s) 56, 239, 676, 1080, 1221
BmrFI CCNGG 6 cut(s) 77, 276, 672, 679, 1273, 1340
BmsI GCATC 4 cut(s) 106, 419, 838, 1026
BpmI CTGGAG 1 cut(s) 1118
Bpu10I CCTNAGC 1 cut(s) 528
Bpu1102I GCTNAGC 1 cut(s) 825
BpuEI CTTGAG 1 cut(s) 854
BpuMI CCSGG 1 cut(s) 77
BsaAI YACGTR 1 cut(s) 772
BsaHI GRCGYC 1 cut(s) 73
BsaJI CCNNGG 6 cut(s) 76, 274, 275, 712, 922, 1414
BsaWI WCCGGW 1 cut(s) 590
Bsc4I CCNNNNNNNGG 4 cut(s) 75, 365, 629, 671
Bse118I RCCGGY 2 cut(s) 535, 590
Bse1I ACTGG 2 cut(s) 394, 1135
Bse3DI GCAATG 1 cut(s) 819
BseBI CCWGG 5 cut(s) 276, 672, 679, 1273, 1340
BseDI CCNNGG 6 cut(s) 76, 274, 275, 712, 922, 1414
BseGI GGATG 2 cut(s) 434, 1450
BseLI CCNNNNNNNGG 4 cut(s) 75, 365, 629, 671
BseMI GCAATG 1 cut(s) 819
BseMII CTCAG 4 cut(s) 186, 239, 839, 1016
BseNI ACTGG 2 cut(s) 394, 1135
BseXI GCAGC 3 cut(s) 131, 160, 1367
BseYI CCCAGC 1 cut(s) 42
Bsh1285I CGRYCG 1 cut(s) 492
BshTI ACCGGT 1 cut(s) 590
BsiEI CGRYCG 1 cut(s) 492
BsiSI CCGG 3 cut(s) 76, 536, 591
BslFI GGGAC 1 cut(s) 1233
BslI CCNNNNNNNGG 4 cut(s) 75, 365, 629, 671
BsmAI GTCTC 2 cut(s) 121, 1034
BsmBI CGTCTC 1 cut(s) 121
BsmFI GGGAC 1 cut(s) 1233
BsmI GAATGC 1 cut(s) 639
Bsp1407I TGTACA 1 cut(s) 148
Bsp143I GATC 4 cut(s) 191, 601, 674, 814
Bsp1720I GCTNAGC 1 cut(s) 825
Bsp19I CCATGG 1 cut(s) 1414
BspACI CCGC 1 cut(s) 58
BspCNI CTCAG 4 cut(s) 187, 238, 838, 1015
BspLI GGNNCC 5 cut(s) 56, 239, 676, 1080, 1221
BspMAI CTGCAG 3 cut(s) 338, 688, 1150
BspMI ACCTGC 2 cut(s) 191, 356
BspPI GGATC 2 cut(s) 669, 682
BsrDI GCAATG 1 cut(s) 819
BsrFI RCCGGY 2 cut(s) 535, 590
BsrGI TGTACA 1 cut(s) 148
BsrI ACTGG 2 cut(s) 394, 1135
BssAI RCCGGY 2 cut(s) 535, 590
BssECI CCNNGG 6 cut(s) 76, 274, 275, 712, 922, 1414
BssMI GATC 4 cut(s) 191, 601, 674, 814
BssNI GRCGYC 1 cut(s) 73
BssT1I CCWWGG 2 cut(s) 922, 1414
Bst2UI CCWGG 5 cut(s) 276, 672, 679, 1273, 1340
Bst4CI ACNGT 3 cut(s) 132, 245, 894
BstACI GRCGYC 1 cut(s) 73
BstAUI TGTACA 1 cut(s) 148
BstBAI YACGTR 1 cut(s) 772
BstC8I GCNNGC 3 cut(s) 481, 1316, 1385
BstDEI CTNAG 6 cut(s) 195, 225, 299, 528, 825, 1002
BstDSI CCRYGG 2 cut(s) 712, 1414
BstENI CCTNNNNNAGG 1 cut(s) 363
BstF5I GGATG 2 cut(s) 434, 1450
BstHHI GCGC 1 cut(s) 1389
BstKTI GATC 4 cut(s) 194, 604, 677, 817
BstMAI GTCTC 2 cut(s) 121, 1034
BstMBI GATC 4 cut(s) 191, 601, 674, 814
BstMCI CGRYCG 1 cut(s) 492
BstMWI GCNNNNNNNGC 2 cut(s) 835, 1386
BstNI CCWGG 5 cut(s) 276, 672, 679, 1273, 1340
BstSCI CCNGG 6 cut(s) 75, 274, 670, 677, 1271, 1338
BstSFI CTRYAG 5 cut(s) 334, 684, 760, 1146, 1213
BstSNI TACGTA 1 cut(s) 772
BstV1I GCAGC 3 cut(s) 131, 160, 1367
BstX2I RGATCY 2 cut(s) 191, 674
BstYI RGATCY 2 cut(s) 191, 674
BtgI CCRYGG 2 cut(s) 712, 1414
BtrI CACGTC 1 cut(s) 105
BtsCI GGATG 2 cut(s) 434, 1450
BtsI GCAGTG 1 cut(s) 343
BtsIMutI CAGTG 2 cut(s) 343, 1080
BveI ACCTGC 2 cut(s) 191, 356
Cac8I GCNNGC 3 cut(s) 481, 1316, 1385
CfoI GCGC 1 cut(s) 1389
Cfr10I RCCGGY 2 cut(s) 535, 590
Cfr13I GGNCC 3 cut(s) 55, 391, 1220
CseI GACGC 3 cut(s) 81, 396, 585
Csp6I GTAC 3 cut(s) 149, 745, 773
CspAI ACCGGT 1 cut(s) 590
CviAII CATG 9 cut(s) 26, 285, 344, 411, 547, 857, 946, 1105, 1415
CviQI GTAC 3 cut(s) 149, 745, 773
DdeI CTNAG 6 cut(s) 195, 225, 299, 528, 825, 1002
DpnI GATC 4 cut(s) 193, 603, 676, 816
DpnII GATC 4 cut(s) 191, 601, 674, 814
DraI TTTAAA 1 cut(s) 967
DrdI GACNNNNNNGTC 1 cut(s) 595
DseDI GACNNNNNNGTC 1 cut(s) 595
Eco105I TACGTA 1 cut(s) 772
Eco130I CCWWGG 2 cut(s) 922, 1414
Eco32I GATATC 2 cut(s) 996, 1249
Eco47I GGWCC 3 cut(s) 55, 391, 1220
Eco57I CTGAAG 1 cut(s) 681
EcoNI CCTNNNNNAGG 1 cut(s) 363
EcoO109I RGGNCCY 1 cut(s) 1220
EcoRII CCWGG 5 cut(s) 274, 670, 677, 1271, 1338
EcoRV GATATC 2 cut(s) 996, 1249
EcoT14I CCWWGG 2 cut(s) 922, 1414
EcoT22I ATGCAT 1 cut(s) 416
ErhI CCWWGG 2 cut(s) 922, 1414
Esp3I CGTCTC 1 cut(s) 121
FaeI CATG 9 cut(s) 29, 288, 347, 414, 550, 860, 949, 1108, 1418
FaqI GGGAC 1 cut(s) 1233
FatI CATG 9 cut(s) 25, 284, 343, 410, 546, 856, 945, 1104, 1414
FbaI TGATCA 1 cut(s) 601
Fnu4HI GCNGC 3 cut(s) 120, 174, 1381
FokI GGATG 1 cut(s) 441
Fsp4HI GCNGC 3 cut(s) 120, 174, 1381
FspBI CTAG 2 cut(s) 204, 1244
GlaI GCGC 1 cut(s) 1388
GluI GCNGC 3 cut(s) 120, 174, 1381
GsaI CCCAGC 1 cut(s) 46
GsuI CTGGAG 1 cut(s) 1118
HapII CCGG 3 cut(s) 76, 536, 591
HgaI GACGC 3 cut(s) 81, 396, 585
HhaI GCGC 1 cut(s) 1389
Hin1I GRCGYC 1 cut(s) 73
Hin1II CATG 9 cut(s) 29, 288, 347, 414, 550, 860, 949, 1108, 1418
Hin6I GCGC 1 cut(s) 1387
HinP1I GCGC 1 cut(s) 1387
HindIII AAGCTT 1 cut(s) 1157
HinfI GANTC 6 cut(s) 293, 311, 317, 949, 1070, 1286
HpaII CCGG 3 cut(s) 76, 536, 591
HphI GGTGA 2 cut(s) 209, 938
Hpy166II GTNNAC 1 cut(s) 1411
Hpy188I TCNGA 7 cut(s) 115, 196, 249, 316, 322, 601, 1295
Hpy188III TCNNGA 7 cut(s) 155, 493, 833, 877, 1010, 1021, 1124
Hpy8I GTNNAC 1 cut(s) 1411
Hpy99I CGWCG 2 cut(s) 578, 938
HpyAV CCTTC 5 cut(s) 88, 705, 852, 879, 935
HpyCH4III ACNGT 3 cut(s) 132, 245, 894
HpyCH4IV ACGT 2 cut(s) 104, 771
HpyF10VI GCNNNNNNNGC 2 cut(s) 835, 1386
HpyF3I CTNAG 6 cut(s) 195, 225, 299, 528, 825, 1002
HpySE526I ACGT 2 cut(s) 104, 771
Hsp92I GRCGYC 1 cut(s) 73
Hsp92II CATG 9 cut(s) 29, 288, 347, 414, 550, 860, 949, 1108, 1418
HspAI GCGC 1 cut(s) 1387
Ksp22I TGATCA 1 cut(s) 601
Kzo9I GATC 4 cut(s) 191, 601, 674, 814
LmnI GCTCC 2 cut(s) 714, 757
Lsp1109I GCAGC 3 cut(s) 131, 160, 1367
LweI GCATC 4 cut(s) 106, 419, 838, 1026
MaeI CTAG 2 cut(s) 204, 1244
MaeII ACGT 2 cut(s) 104, 771
MaeIII GTNAC 3 cut(s) 100, 455, 1435
MalI GATC 4 cut(s) 193, 603, 676, 816
MboI GATC 4 cut(s) 191, 601, 674, 814
MboII GAAGA 3 cut(s) 97, 103, 335
MfeI CAATTG 2 cut(s) 386, 777
MflI RGATCY 2 cut(s) 191, 674
MlyI GAGTC 2 cut(s) 287, 958
Mph1103I ATGCAT 1 cut(s) 416
MroXI GAANNNNTTC 1 cut(s) 725
MseI TTAA 5 cut(s) 36, 705, 885, 966, 1331
MslI CAYNNNNRTG 1 cut(s) 348
MspI CCGG 3 cut(s) 76, 536, 591
MspR9I CCNGG 6 cut(s) 77, 276, 672, 679, 1273, 1340
MunI CAATTG 2 cut(s) 386, 777
Mva1269I GAATGC 1 cut(s) 639
MvaI CCWGG 5 cut(s) 276, 672, 679, 1273, 1340
MwoI GCNNNNNNNGC 2 cut(s) 835, 1386
NciI CCSGG 1 cut(s) 77
NcoI CCATGG 1 cut(s) 1414
NdeII GATC 4 cut(s) 191, 601, 674, 814
NlaIII CATG 9 cut(s) 29, 288, 347, 414, 550, 860, 949, 1108, 1418
NlaIV GGNNCC 5 cut(s) 56, 239, 676, 1080, 1221
NmuCI GTSAC 1 cut(s) 100
NsiI ATGCAT 1 cut(s) 416
PasI CCCWGGG 1 cut(s) 275
PctI GAATGC 1 cut(s) 639
PdmI GAANNNNTTC 1 cut(s) 725
PfeI GAWTC 4 cut(s) 311, 317, 1070, 1286
PflMI CCANNNNNTGG 1 cut(s) 671
PfoI TCCNGGA 2 cut(s) 670, 1271
PinAI ACCGGT 1 cut(s) 590
PkrI GCNGC 3 cut(s) 121, 175, 1382
PleI GAGTC 2 cut(s) 287, 957
PpsI GAGTC 2 cut(s) 287, 957
Ppu21I YACGTR 1 cut(s) 772
PpuMI RGGWCCY 1 cut(s) 1220
PsiI TTATAA 2 cut(s) 558, 1173
Psp5II RGGWCCY 1 cut(s) 1220
Psp6I CCWGG 5 cut(s) 274, 670, 677, 1271, 1338
PspFI CCCAGC 1 cut(s) 42
PspGI CCWGG 5 cut(s) 274, 670, 677, 1271, 1338
PspN4I GGNNCC 5 cut(s) 56, 239, 676, 1080, 1221
PspPI GGNCC 3 cut(s) 55, 391, 1220
PspPPI RGGWCCY 1 cut(s) 1220
PsrI GAACNNNNNNTAC 2 cut(s) 428, 460
PstI CTGCAG 3 cut(s) 338, 688, 1150
PsuI RGATCY 2 cut(s) 191, 674
RsaI GTAC 3 cut(s) 150, 746, 774
RsaNI GTAC 3 cut(s) 149, 745, 773
RseI CAYNNNNRTG 1 cut(s) 348
SaqAI TTAA 5 cut(s) 36, 705, 885, 966, 1331
SatI GCNGC 3 cut(s) 120, 174, 1381
Sau3AI GATC 4 cut(s) 191, 601, 674, 814
Sau96I GGNCC 3 cut(s) 55, 391, 1220
SchI GAGTC 2 cut(s) 287, 958
ScrFI CCNGG 6 cut(s) 77, 276, 672, 679, 1273, 1340
SfaNI GCATC 4 cut(s) 106, 419, 838, 1026
SfcI CTRYAG 5 cut(s) 334, 684, 760, 1146, 1213
SinI GGWCC 3 cut(s) 55, 391, 1220
SmiMI CAYNNNNRTG 1 cut(s) 348
SmlI CTYRAG 1 cut(s) 833
SmoI CTYRAG 1 cut(s) 833
SnaBI TACGTA 1 cut(s) 772
SsiI CCGC 1 cut(s) 58
SspMI CTAG 2 cut(s) 204, 1244
StyD4I CCNGG 6 cut(s) 75, 274, 670, 677, 1271, 1338
StyI CCWWGG 2 cut(s) 922, 1414
TaaI ACNGT 3 cut(s) 132, 245, 894
TaiI ACGT 2 cut(s) 107, 774
TaqI TCGA 2 cut(s) 492, 573
TaqII GACCGA 1 cut(s) 478
TatI WGTACW 1 cut(s) 148
TfiI GAWTC 4 cut(s) 311, 317, 1070, 1286
Tru1I TTAA 5 cut(s) 36, 705, 885, 966, 1331
Tru9I TTAA 5 cut(s) 36, 705, 885, 966, 1331
TscAI CASTG 2 cut(s) 343, 1080
TseFI GTSAC 1 cut(s) 100
TseI GCWGC 3 cut(s) 119, 173, 1380
Tsp45I GTSAC 1 cut(s) 100
TspDTI ATGAA 4 cut(s) 104, 414, 465, 990
TspGWI ACGGA 1 cut(s) 701
TspRI CASTG 2 cut(s) 343, 1080
Van91I CCANNNNNTGG 1 cut(s) 671
VpaK11BI GGWCC 3 cut(s) 55, 391, 1220
XagI CCTNNNNNAGG 1 cut(s) 363
XapI RAATTY 3 cut(s) 979, 1025, 1403
XcmI CCANNNNNNNNNTGG 1 cut(s) 282
XmnI GAANNNNTTC 1 cut(s) 725
XspI CTAG 2 cut(s) 204, 1244
Zsp2I ATGCAT 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.