Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0008655

Physical Location & Seq

Genomic Coordinates Forward (+)

28431067 .. 28434791

Gene Structure 3725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G280800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGGAGGTGAGCAACACAAAGCAGCAGCACCAAAGCGCTTCTATCAGTCTCACGAAACCAGTTCGTTGCATCGTCAAACTCGGAGGTGCAGCAATTACTTGCAAGAATGAATTAGAGACCATAAATGAAGAAAATCTGAAGACGGTTTCCTCGCAGCTGAGGCAATCAATGACCACGGGGTCGAATTCTGGGGAGGTTCTTGGGATGGATTGGAGCAAGCAACCTGGAGAATCAGAAATTTCATCTACCCTAAGTGATTTTGAAGATCGGCCGGTTGTGGATTCCAGCCCTTTTATAGTTGTTCACGGAGCAGGTTCTTTTGGGCATTTTCAAGCTAGTAAATCTGGGGTCCATAAAGGTGGACTGTACCAACCCCTTGTGAAGGCTGGTTTTGTTGCCACACGCATCTCTGTTACAAAGCTCAATCTTGAAATTGTTAGAGCGCTAGCTAGGGAGGGTATTCCTTCCATAGGAATGTCTCCATTTTCATGTGGATGGTCAACCCGTGAAAGAAATATAGCTTCAGCTGATTTATCTGCAGTGGCTAAGGCTATTGAATCTGGTTTAGTACCTGTTTTGCATGGAGATGCCGTGCTCGATGACTTACTGGACTGTACCATCTTGAGTGGAGATGCCATCATCAGTCATCTTGCAGCCCACTTGAAGCCTGAATATGTTGTTTTTCTCACTGATGTTTCGGGAGTTTATGATCGTCCACCATCAGATCCAAATGCAGTACTCTTGAGAGAAATTGCTGTGGCTAAAGATGGGAGCTGGTCGATCGAGAAGCCAACATTTCAGAACAAGAACAAGCAAGTTGAAACAAGTGTAGCAGCCCATGATACAACCGGTGGAATGCTGACCAAGATATCTGAAGCTGCAGCGATTGCGAAACTCGGAATCGATGTATATATTGTAAAGGCAGCTACGAGCCATGCATTTAAGGCCTTTAGTGGAGAATTGAAAGGCAACCTTCCTGAAGACTGGCTTGGAACCGCAATCCGGTTTTCCAATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016114 GO:0016740 GO:0016772 GO:0016776 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0102043 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_kinase

Protein Analysis

340

Amino Acids

36.12

Weight (kDa)

6.15

Isoelectric Point (pI)

39.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26640
fragaria_vesca	FvH4_4g30620 FvH4_4g30620 FvH4_4g30620 FvH4_4g30620 FvH4_4g30620
malus_domestica	MD13G1067400.v1.1
prunus_persica	Prupe.1G280800_v2.0.a1 Prupe.1G280800_v2.0.a1
pyrus_communis	pycom13g05930
rosa_chinensis	RchiOBHm_Chr4g0439031
rosa_laevigata	RLG00000006308
rosa_multiflora	Rmu_sc0005887.1_g000014 Rmu_sc0022205.1_g000002
rosa_roxburghii	Rroxscaffold_5G00380030
rosa_rugosa	Rorug04G0315200 Rorug04G0315200
rosa_samantha	Rh4AG365800 Rh4BG377100 Rh4CG391200 Rh4DG371800
rosa_wichuraiana	Rw0G007410 Rw0G016960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	178
Acc36I	ACCTGC	1 cut(s)	302
AciI	CCGC	1 cut(s)	996
AclWI	GGATC	1 cut(s)	719
AcoI	YGGCCR	1 cut(s)	269
AcsI	RAATTY	2 cut(s)	184, 237
AcuI	CTGAAG	4 cut(s)	158, 507, 894, 999
AfaI	GTAC	4 cut(s)	368, 570, 616, 738
AfeI	AGCGCT	2 cut(s)	37, 444
AfiI	CCNNNNNNNGG	3 cut(s)	382, 470, 1002
AgeI	ACCGGT	1 cut(s)	848
AgsI	TTSAA	7 cut(s)	263, 332, 431, 557, 664, 821, 964
AjnI	CCWGG	1 cut(s)	223
AjuI	GAANNNNNNNTTGG	2 cut(s)	972, 1004
AluBI	AGCT	9 cut(s)	157, 335, 421, 449, 521, 527, 774, 878, 926
AluI	AGCT	9 cut(s)	157, 335, 421, 449, 521, 527, 774, 878, 926
Alw21I	GWGCWC	1 cut(s)	597
Alw26I	GTCTC	3 cut(s)	53, 110, 483
AlwI	GGATC	1 cut(s)	719
Aor51HI	AGCGCT	2 cut(s)	37, 444
AoxI	GGCC	2 cut(s)	269, 945
ApeKI	GCWGC	9 cut(s)	22, 25, 89, 154, 653, 833, 878, 881, 923
ApoI	RAATTY	2 cut(s)	184, 237
AsiGI	ACCGGT	1 cut(s)	848
AspLEI	GCGC	2 cut(s)	38, 445
AspS9I	GGNCC	1 cut(s)	349
AsuHPI	GGTGA	1 cut(s)	19
AsuNHI	GCTAGC	1 cut(s)	445
AvaII	GGWCC	1 cut(s)	349
BbsI	GAAGAC	2 cut(s)	146, 987
Bbv12I	GWGCWC	1 cut(s)	597
BbvCI	CCTCAGC	1 cut(s)	158
BbvI	GCAGC	9 cut(s)	34, 37, 101, 166, 665, 845, 865, 893, 935
BccI	CCATC	6 cut(s)	199, 489, 626, 644, 727, 761
BceAI	ACGGC	1 cut(s)	575
BciT130I	CCWGG	1 cut(s)	225
BcoDI	GTCTC	3 cut(s)	53, 110, 483
BfaI	CTAG	3 cut(s)	336, 446, 450
BfmI	CTRYAG	2 cut(s)	537, 879
BfoI	RGCGCY	2 cut(s)	39, 446
BfuAI	ACCTGC	1 cut(s)	302
BisI	GCNGC	9 cut(s)	23, 26, 90, 155, 654, 834, 879, 882, 924
BlsI	GCNGC	9 cut(s)	24, 27, 91, 156, 655, 835, 880, 883, 925
BmcAI	AGTACT	1 cut(s)	738
Bme1390I	CCNGG	1 cut(s)	225
Bme18I	GGWCC	1 cut(s)	349
BmgT120I	GGNCC	1 cut(s)	349
BmiI	GGNNCC	2 cut(s)	350, 994
BmrFI	CCNGG	1 cut(s)	225
BmsI	GCATC	4 cut(s)	78, 414, 577, 622
BmtI	GCTAGC	1 cut(s)	449
BpiI	GAAGAC	2 cut(s)	146, 987
BpmI	CTGGAG	1 cut(s)	246
Bpu10I	CCTNAGC	2 cut(s)	158, 546
BpuEI	CTTGAG	2 cut(s)	643, 763
Bsa29I	ATCGAT	1 cut(s)	903
BsaI	GGTCTC	1 cut(s)	110
BsaJI	CCNNGG	1 cut(s)	174
BsaWI	WCCGGW	2 cut(s)	848, 1002
BsaXI	ACNNNNNCTCC	2 cut(s)	576, 606
Bsc4I	CCNNNNNNNGG	3 cut(s)	382, 470, 1002
Bse118I	RCCGGY	2 cut(s)	271, 848
Bse1I	ACTGG	3 cut(s)	59, 612, 989
BseBI	CCWGG	1 cut(s)	225
BseCI	ATCGAT	1 cut(s)	903
BseDI	CCNNGG	1 cut(s)	174
BseGI	GGATG	2 cut(s)	210, 500
BseLI	CCNNNNNNNGG	3 cut(s)	382, 470, 1002
BseMII	CTCAG	1 cut(s)	149
BseNI	ACTGG	3 cut(s)	59, 612, 989
BseX3I	CGGCCG	1 cut(s)	269
BseXI	GCAGC	9 cut(s)	34, 37, 101, 166, 665, 845, 865, 893, 935
BsgI	GTGCAG	1 cut(s)	108
Bsh1285I	CGRYCG	2 cut(s)	272, 783
BshFI	GGCC	2 cut(s)	271, 947
BshTI	ACCGGT	1 cut(s)	848
BshVI	ATCGAT	1 cut(s)	903
BsiEI	CGRYCG	2 cut(s)	272, 783
BsiHKAI	GWGCWC	1 cut(s)	597
BsiSI	CCGG	3 cut(s)	272, 849, 1003
BslI	CCNNNNNNNGG	3 cut(s)	382, 470, 1002
BsmAI	GTCTC	3 cut(s)	53, 110, 483
BsmI	GAATGC	1 cut(s)	861
BsnI	GGCC	2 cut(s)	271, 947
Bso31I	GGTCTC	1 cut(s)	110
Bsp1286I	GDGCHC	1 cut(s)	597
Bsp143I	GATC	4 cut(s)	265, 709, 724, 780
BspACI	CCGC	1 cut(s)	996
BspANI	GGCC	2 cut(s)	271, 947
BspCNI	CTCAG	1 cut(s)	150
BspDI	ATCGAT	1 cut(s)	903
BspLI	GGNNCC	2 cut(s)	350, 994
BspMAI	CTGCAG	2 cut(s)	541, 883
BspMI	ACCTGC	1 cut(s)	302
BspOI	GCTAGC	1 cut(s)	449
BspPI	GGATC	1 cut(s)	719
BspTNI	GGTCTC	1 cut(s)	110
BsrFI	RCCGGY	2 cut(s)	271, 848
BsrI	ACTGG	3 cut(s)	59, 612, 989
BssAI	RCCGGY	2 cut(s)	271, 848
BssECI	CCNNGG	1 cut(s)	174
BssMI	GATC	4 cut(s)	265, 709, 724, 780
Bst2UI	CCWGG	1 cut(s)	225
Bst4CI	ACNGT	3 cut(s)	145, 366, 614
BstAPI	GCANNNNNTGC	1 cut(s)	887
BstC8I	GCNNGC	2 cut(s)	218, 447
BstDEI	CTNAG	3 cut(s)	158, 251, 546
BstDSI	CCRYGG	1 cut(s)	174
BstENI	CCTNNNNNAGG	2 cut(s)	380, 468
BstF5I	GGATG	2 cut(s)	210, 500
BstH2I	RGCGCY	2 cut(s)	39, 446
BstHHI	GCGC	2 cut(s)	38, 445
BstKTI	GATC	4 cut(s)	268, 712, 727, 783
BstMAI	GTCTC	3 cut(s)	53, 110, 483
BstMBI	GATC	4 cut(s)	265, 709, 724, 780
BstMCI	CGRYCG	2 cut(s)	272, 783
BstMWI	GCNNNNNNNGC	3 cut(s)	160, 887, 944
BstNI	CCWGG	1 cut(s)	225
BstSCI	CCNGG	1 cut(s)	223
BstSFI	CTRYAG	2 cut(s)	537, 879
BstV1I	GCAGC	9 cut(s)	34, 37, 101, 166, 665, 845, 865, 893, 935
BstV2I	GAAGAC	2 cut(s)	146, 987
BstX2I	RGATCY	1 cut(s)	724
BstXI	CCANNNNNNTGG	1 cut(s)	359
BstYI	RGATCY	1 cut(s)	724
BstZI	CGGCCG	1 cut(s)	269
Bsu15I	ATCGAT	1 cut(s)	903
BsuRI	GGCC	2 cut(s)	271, 947
BsuTUI	ATCGAT	1 cut(s)	903
BtgI	CCRYGG	1 cut(s)	174
BtsCI	GGATG	2 cut(s)	210, 500
BtsI	GCAGTG	1 cut(s)	546
BtsIMutI	CAGTG	2 cut(s)	546, 687
BveI	ACCTGC	1 cut(s)	302
Cac8I	GCNNGC	2 cut(s)	218, 447
CfoI	GCGC	2 cut(s)	38, 445
Cfr10I	RCCGGY	2 cut(s)	271, 848
Cfr13I	GGNCC	1 cut(s)	349
ClaI	ATCGAT	1 cut(s)	903
Csp6I	GTAC	4 cut(s)	367, 569, 615, 737
CspAI	ACCGGT	1 cut(s)	848
CviAII	CATG	4 cut(s)	489, 581, 839, 935
CviQI	GTAC	4 cut(s)	367, 569, 615, 737
DdeI	CTNAG	3 cut(s)	158, 251, 546
DpnI	GATC	4 cut(s)	267, 711, 726, 782
DpnII	GATC	4 cut(s)	265, 709, 724, 780
DrdI	GACNNNNNNGTC	1 cut(s)	178
DseDI	GACNNNNNNGTC	1 cut(s)	178
EaeI	YGGCCR	1 cut(s)	269
EagI	CGGCCG	1 cut(s)	269
EclXI	CGGCCG	1 cut(s)	269
Eco147I	AGGCCT	1 cut(s)	947
Eco31I	GGTCTC	1 cut(s)	110
Eco32I	GATATC	1 cut(s)	870
Eco47I	GGWCC	1 cut(s)	349
Eco47III	AGCGCT	2 cut(s)	37, 444
Eco52I	CGGCCG	1 cut(s)	269
Eco57I	CTGAAG	4 cut(s)	158, 507, 894, 999
EcoNI	CCTNNNNNAGG	2 cut(s)	380, 468
EcoRI	GAATTC	1 cut(s)	184
EcoRII	CCWGG	1 cut(s)	223
EcoRV	GATATC	1 cut(s)	870
EcoT22I	ATGCAT	1 cut(s)	940
FaeI	CATG	4 cut(s)	492, 584, 842, 938
FalI	AAGNNNNNCTT	4 cut(s)	957, 989, 972, 1004
FatI	CATG	4 cut(s)	488, 580, 838, 934
Fnu4HI	GCNGC	9 cut(s)	23, 26, 90, 155, 654, 834, 879, 882, 924
FokI	GGATG	2 cut(s)	217, 507
Fsp4HI	GCNGC	9 cut(s)	23, 26, 90, 155, 654, 834, 879, 882, 924
FspBI	CTAG	3 cut(s)	336, 446, 450
GlaI	GCGC	2 cut(s)	37, 444
GluI	GCNGC	9 cut(s)	23, 26, 90, 155, 654, 834, 879, 882, 924
GsuI	CTGGAG	1 cut(s)	246
HaeII	RGCGCY	2 cut(s)	39, 446
HaeIII	GGCC	2 cut(s)	271, 947
HapII	CCGG	3 cut(s)	272, 849, 1003
HhaI	GCGC	2 cut(s)	38, 445
Hin1II	CATG	4 cut(s)	492, 584, 842, 938
Hin6I	GCGC	2 cut(s)	36, 443
HinP1I	GCGC	2 cut(s)	36, 443
HincII	GTYRAC	1 cut(s)	501
HindII	GTYRAC	1 cut(s)	501
HinfI	GANTC	4 cut(s)	230, 281, 557, 900
HpaII	CCGG	3 cut(s)	272, 849, 1003
HphI	GGTGA	1 cut(s)	19
Hpy166II	GTNNAC	4 cut(s)	304, 362, 501, 716
Hpy188I	TCNGA	7 cut(s)	83, 138, 235, 724, 801, 874, 899
Hpy188III	TCNNGA	7 cut(s)	52, 428, 622, 699, 742, 784, 977
Hpy8I	GTNNAC	4 cut(s)	304, 362, 501, 716
HpyAV	CCTTC	3 cut(s)	376, 474, 983
HpyCH4III	ACNGT	3 cut(s)	145, 366, 614
HpyCH4V	TGCA	9 cut(s)	69, 89, 102, 539, 580, 653, 734, 881, 938
HpyF10VI	GCNNNNNNNGC	3 cut(s)	160, 887, 944
HpyF3I	CTNAG	3 cut(s)	158, 251, 546
Hsp92II	CATG	4 cut(s)	492, 584, 842, 938
HspAI	GCGC	2 cut(s)	36, 443
Kzo9I	GATC	4 cut(s)	265, 709, 724, 780
LmnI	GCTCC	3 cut(s)	213, 308, 771
Lsp1109I	GCAGC	9 cut(s)	34, 37, 101, 166, 665, 845, 865, 893, 935
LweI	GCATC	4 cut(s)	78, 414, 577, 622
MaeI	CTAG	3 cut(s)	336, 446, 450
MaeIII	GTNAC	1 cut(s)	412
MalI	GATC	4 cut(s)	267, 711, 726, 782
MboI	GATC	4 cut(s)	265, 709, 724, 780
MboII	GAAGA	4 cut(s)	140, 151, 275, 992
MflI	RGATCY	1 cut(s)	724
MhlI	GDGCHC	1 cut(s)	597
MluCI	AATT	7 cut(s)	93, 110, 184, 237, 432, 750, 959
MnlI	CCTC	5 cut(s)	77, 153, 160, 187, 448
Mph1103I	ATGCAT	1 cut(s)	940
MseI	TTAA	1 cut(s)	942
MslI	CAYNNNNRTG	5 cut(s)	357, 473, 487, 493, 585
MspA1I	CMGCKG	2 cut(s)	157, 527
MspI	CCGG	3 cut(s)	272, 849, 1003
MspR9I	CCNGG	1 cut(s)	225
Mva1269I	GAATGC	1 cut(s)	861
MvaI	CCWGG	1 cut(s)	225
MwoI	GCNNNNNNNGC	3 cut(s)	160, 887, 944
NdeII	GATC	4 cut(s)	265, 709, 724, 780
NheI	GCTAGC	1 cut(s)	445
NlaIII	CATG	4 cut(s)	492, 584, 842, 938
NlaIV	GGNNCC	2 cut(s)	350, 994
NsiI	ATGCAT	1 cut(s)	940
PceI	AGGCCT	1 cut(s)	947
PctI	GAATGC	1 cut(s)	861
PfeI	GAWTC	4 cut(s)	230, 281, 557, 900
PinAI	ACCGGT	1 cut(s)	848
PkrI	GCNGC	9 cut(s)	24, 27, 91, 156, 655, 835, 880, 883, 925
Ple19I	CGATCG	1 cut(s)	783
Psp6I	CCWGG	1 cut(s)	223
PspGI	CCWGG	1 cut(s)	223
PspN4I	GGNNCC	2 cut(s)	350, 994
PspPI	GGNCC	1 cut(s)	349
PstI	CTGCAG	2 cut(s)	541, 883
PsuI	RGATCY	1 cut(s)	724
PvuI	CGATCG	1 cut(s)	783
PvuII	CAGCTG	2 cut(s)	157, 527
RsaI	GTAC	4 cut(s)	368, 570, 616, 738
RsaNI	GTAC	4 cut(s)	367, 569, 615, 737
RseI	CAYNNNNRTG	5 cut(s)	357, 473, 487, 493, 585
SaqAI	TTAA	1 cut(s)	942
SatI	GCNGC	9 cut(s)	23, 26, 90, 155, 654, 834, 879, 882, 924
Sau3AI	GATC	4 cut(s)	265, 709, 724, 780
Sau96I	GGNCC	1 cut(s)	349
ScaI	AGTACT	1 cut(s)	738
ScrFI	CCNGG	1 cut(s)	225
SduI	GDGCHC	1 cut(s)	597
SfaNI	GCATC	4 cut(s)	78, 414, 577, 622
SfcI	CTRYAG	2 cut(s)	537, 879
SinI	GGWCC	1 cut(s)	349
SmiMI	CAYNNNNRTG	5 cut(s)	357, 473, 487, 493, 585
SmlI	CTYRAG	2 cut(s)	622, 742
SmoI	CTYRAG	2 cut(s)	622, 742
Sse9I	AATT	7 cut(s)	93, 110, 184, 237, 432, 750, 959
SseBI	AGGCCT	1 cut(s)	947
SsiI	CCGC	1 cut(s)	996
SspMI	CTAG	3 cut(s)	336, 446, 450
StuI	AGGCCT	1 cut(s)	947
StyD4I	CCNGG	1 cut(s)	223
TaaI	ACNGT	3 cut(s)	145, 366, 614
TaqI	TCGA	5 cut(s)	182, 597, 779, 783, 903
TasI	AATT	7 cut(s)	93, 110, 184, 237, 432, 750, 959
TatI	WGTACW	1 cut(s)	736
TfiI	GAWTC	4 cut(s)	230, 281, 557, 900
Tru1I	TTAA	1 cut(s)	942
Tru9I	TTAA	1 cut(s)	942
TscAI	CASTG	2 cut(s)	546, 694
TseI	GCWGC	9 cut(s)	22, 25, 89, 154, 653, 833, 878, 881, 923
TspDTI	ATGAA	4 cut(s)	123, 141, 231, 477
TspGWI	ACGGA	1 cut(s)	321
TspRI	CASTG	2 cut(s)	546, 694
VpaK11BI	GGWCC	1 cut(s)	349
XagI	CCTNNNNNAGG	2 cut(s)	380, 468
XapI	RAATTY	2 cut(s)	184, 237
XspI	CTAG	3 cut(s)	336, 446, 450
ZrmI	AGTACT	1 cut(s)	738
Zsp2I	ATGCAT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.